Miyakogusa Predicted Gene

Lj1g3v0525430.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0525430.2 Non Chatacterized Hit- tr|I1KCV4|I1KCV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39529 PE,82.81,0,SNARE
PROTEIN, PUTATIVE,NULL; VESICLE TRANSPORT V-SNARE PROTEIN
VTI1-RELATED,NULL; V-SNARE,Vesicle t,CUFF.25943.2
         (221 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39510.1 | Symbols: VTI11, ATVTI1A, ATVTI11, ZIG, SGR4, VTI1A...   296   1e-80
AT1G26670.1 | Symbols: VTI12, ATVTI12, VTI1B | Vesicle transport...   293   6e-80
AT3G29100.1 | Symbols: VTI13, ATVTI13 | vesicle transport V-snar...   229   1e-60
AT3G29100.2 | Symbols: VTI13 | vesicle transport V-snare 13 | ch...   224   4e-59
AT5G39630.1 | Symbols:  | Vesicle transport v-SNARE family prote...   164   6e-41

>AT5G39510.1 | Symbols: VTI11, ATVTI1A, ATVTI11, ZIG, SGR4, VTI1A,
           ZIG1 | Vesicle transport v-SNARE family protein |
           chr5:15822035-15823591 FORWARD LENGTH=221
          Length = 221

 Score =  296 bits (757), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 140/220 (63%), Positives = 186/220 (84%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASALDGEQKKQKLSEIKAGLDDADALVRKMDLEAR 60
           MS+VF+GYERQYCELSA+L+++C++A +LDGEQKKQKLSEIK+GL++A+ L+RKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQR 120
           +L P++K++LLVKLR++K+DL + K ++KRI+S  ++  ARDELLE+G AD+   S DQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 GRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNIS 180
            RL+MSTERL ++TDR+KDSR+TM+ETEE+GVSILQDLH QRQSLL AH TLHGVDDNI 
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 RSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLT 220
           +SKKIL+ M+RRM++NKW +G+++           YFKLT
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKLT 220


>AT1G26670.1 | Symbols: VTI12, ATVTI12, VTI1B | Vesicle transport
           v-SNARE family protein | chr1:9216103-9217793 FORWARD
           LENGTH=222
          Length = 222

 Score =  293 bits (750), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 141/222 (63%), Positives = 180/222 (81%), Gaps = 1/222 (0%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASAL-DGEQKKQKLSEIKAGLDDADALVRKMDLEA 59
           MS+VFEGYERQYCELS NL+R+C +AS L +GE+KK K++EIK+G+D+AD L+RKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 60  RSLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQ 119
           RSLQPS KA  L KLR+YK+DL  LK + KR+SSA+   ++R+EL+ESG AD  AVS DQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 120 RGRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNI 179
           RGRL MS ERL+QS+DRI++SR+ MLETEE+G+SI+QDL QQRQ+LLHAH  LHGVDD I
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 180 SRSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLTH 221
            +SKK+L+AMSRRM+RNKWI+ S++            +KL+H
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKLSH 222


>AT3G29100.1 | Symbols: VTI13, ATVTI13 | vesicle transport V-snare
           13 | chr3:11075916-11076581 REVERSE LENGTH=195
          Length = 195

 Score =  229 bits (583), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/169 (63%), Positives = 139/169 (82%)

Query: 52  VRKMDLEARSLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRAD 111
           V+KMDLEAR+L P++K++LLVKLR+YK+DL + K ++KRI+S N++ TARDELLE+G AD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 112 SLAVSNDQRGRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTT 171
           +L  S DQR RL+MST+ L ++TDRIKDSR+T+LETEELGVSILQDLH QRQSLL AH T
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

Query: 172 LHGVDDNISRSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLT 220
           LHGVDDN+ +SKKIL+ M+RRM+RNKW +G+++           YFKLT
Sbjct: 146 LHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLT 194


>AT3G29100.2 | Symbols: VTI13 | vesicle transport V-snare 13 |
           chr3:11075916-11076497 REVERSE LENGTH=167
          Length = 167

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 106/166 (63%), Positives = 136/166 (81%)

Query: 55  MDLEARSLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLA 114
           MDLEAR+L P++K++LLVKLR+YK+DL + K ++KRI+S N++ TARDELLE+G AD+L 
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 115 VSNDQRGRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHG 174
            S DQR RL+MST+ L ++TDRIKDSR+T+LETEELGVSILQDLH QRQSLL AH TLHG
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHG 120

Query: 175 VDDNISRSKKILSAMSRRMSRNKWIVGSLMXXXXXXXXXXXYFKLT 220
           VDDN+ +SKKIL+ M+RRM+RNKW +G+++           YFKLT
Sbjct: 121 VDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKLT 166


>AT5G39630.1 | Symbols:  | Vesicle transport v-SNARE family protein
           | chr5:15868262-15869714 FORWARD LENGTH=207
          Length = 207

 Score =  164 bits (414), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 86/189 (45%), Positives = 137/189 (72%), Gaps = 4/189 (2%)

Query: 1   MSEVFEGYERQYCELSANLTRQCTAASALDGEQKKQKLSEIKAGLDDADALVRKMDLEAR 60
           MS VF  Y++QY ELS NL+++C+ A +L G +KK+KLSEI   L++A+ L+ KMD  A 
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAAS 60

Query: 61  SLQPSMKATLLVKLRDYKNDLTSLKNDIKRISSANVSLTARDELLESGRADSLAVSNDQR 120
           +L P++K+ LL KL++ K+ L  L+N+IKR +S N+ +T R+E+LE+ +AD LA   DQR
Sbjct: 61  NLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKAD-LA---DQR 116

Query: 121 GRLLMSTERLNQSTDRIKDSRKTMLETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNIS 180
            RL+ STE L ++ + IKDS++ +LETE +G+SIL++L +Q++SL ++   LH +DD + 
Sbjct: 117 SRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQAMLHEIDDTVK 176

Query: 181 RSKKILSAM 189
            S+ I+ ++
Sbjct: 177 ESRSIVRSI 185