Miyakogusa Predicted Gene

Lj1g3v0514230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0514230.1 Non Chatacterized Hit- tr|K4BYQ4|K4BYQ4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,44.9,1e-18,
,CUFF.25937.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67370.1 | Symbols: ASY1, ATASY1 | DNA-binding HORMA family p...   214   4e-56

>AT1G67370.1 | Symbols: ASY1, ATASY1 | DNA-binding HORMA family
           protein | chr1:25239347-25243713 REVERSE LENGTH=596
          Length = 596

 Score =  214 bits (545), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/272 (47%), Positives = 165/272 (60%), Gaps = 35/272 (12%)

Query: 1   MDKLVMEGVLSKSGNDTYAITKDKISEYEFTVVKEEVVGQIPQVFDRALQGEDLLYMKAL 60
           MD+LV EGVLSK+G D Y   +DK  E EFT VKEE  GQI     +++  ED LYMKAL
Sbjct: 341 MDQLVTEGVLSKTGKDMYIKKRDKTPESEFTFVKEEADGQISP--GKSVAPEDYLYMKAL 398

Query: 61  YHTLPMTYVSVTKLQGLLEGEVNQTAARKMIDKMIRDGFVEPKGNKRLGKRVIHSELTER 120
           YH+LPM YV++TKL  +L+GE NQTA RK++D+M ++G+VE   N+RLGKRVIHS LTE+
Sbjct: 399 YHSLPMKYVTITKLHNMLDGEANQTAVRKLMDRMTQEGYVEASSNRRLGKRVIHSSLTEK 458

Query: 121 KFIEVQKAITAVEAMDVDNCE-------------PNKSTCGVLHSIGSDLTRMIVTSD-- 165
           K  EV+K + A + MDVD  E              + STCG +HSIGSD TR    S   
Sbjct: 459 KLNEVRKVL-ATDDMDVDVTETINKTNGPDAKVTADVSTCGGIHSIGSDFTRTKGRSGGM 517

Query: 166 TNYSDFKSGHKTPKAKEPGNNPTS-RTEPVTSRESFAQGKENSTANGNRIANQGDDEAAE 224
                  S     KA   GN P S + +P  SRESFA              + G  + AE
Sbjct: 518 QQNGSVLSEQTISKA---GNTPISNKAQPAASRESFA-------------VHGGAVKEAE 561

Query: 225 TIICSRSSQDKRPRKTSAVKEPIHQNVKRQRT 256
           T+ CS++SQD+R RKTS V+EPI Q  KRQ++
Sbjct: 562 TVNCSQASQDRRGRKTSMVREPILQYSKRQKS 593