Miyakogusa Predicted Gene

Lj1g3v0488980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0488980.1 tr|C6T857|C6T857_SOYBN Isocitrate dehydrogenase
[NADP] OS=Glycine max GN=Gma.51869 PE=2
SV=1,94.88,0,Isocitrate/Isopropylmalate dehydrogenase-like,NULL;
IDH_IMDH,Isocitrate/isopropylmalate dehydrogenas,CUFF.26592.1
         (412 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65930.1 | Symbols: cICDH | cytosolic NADP+-dependent isocitr...   772   0.0  
AT1G54340.1 | Symbols: ICDH | isocitrate dehydrogenase | chr1:20...   742   0.0  
AT5G14590.1 | Symbols:  | Isocitrate/isopropylmalate dehydrogena...   693   0.0  

>AT1G65930.1 | Symbols: cICDH | cytosolic NADP+-dependent isocitrate
           dehydrogenase | chr1:24539088-24541861 FORWARD
           LENGTH=410
          Length = 410

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/412 (89%), Positives = 390/412 (94%), Gaps = 2/412 (0%)

Query: 1   MAFDKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTV 60
           MAF+KIKVANPIVEMDGDEMTRVIWKSIKDKLI PF+ELDIKYFDLGLP+RD TDDKVT+
Sbjct: 1   MAFEKIKVANPIVEMDGDEMTRVIWKSIKDKLITPFVELDIKYFDLGLPHRDATDDKVTI 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPILCKNVP 120
           ESAEAT KYNVAIKCATITPDE RV EFGLKQMWRSPNGTIRNILNGTVFREPI+CKNVP
Sbjct: 61  ESAEATKKYNVAIKCATITPDEGRVTEFGLKQMWRSPNGTIRNILNGTVFREPIICKNVP 120

Query: 121 RLVPGWTKAICIGRHAFGDQYRATDQVIKGAGKLKLVFVPEGQGEETELEVYNFTGQGGV 180
           +LVPGWTK ICIGRHAFGDQYRATD VIKG GKL + F  EG+  +TE EV+ FTG+GGV
Sbjct: 121 KLVPGWTKPICIGRHAFGDQYRATDAVIKGPGKLTMTF--EGKDGKTETEVFTFTGEGGV 178

Query: 181 ALAMYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240
           A+AMYNTDESIR+FA+ASM TAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA WKSK
Sbjct: 179 AMAMYNTDESIRAFADASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSK 238

Query: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300
           Y+AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP
Sbjct: 239 YDAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 298

Query: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLSDFTDK 360
           DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKL DFT+K
Sbjct: 299 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEK 358

Query: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKAKLSA 412
           LEAAC+G VESGKMTKDLALI+HGSKLSR+ YLNTEEFIDAVAAELK +L+A
Sbjct: 359 LEAACVGTVESGKMTKDLALIIHGSKLSRDTYLNTEEFIDAVAAELKERLNA 410


>AT1G54340.1 | Symbols: ICDH | isocitrate dehydrogenase |
           chr1:20283520-20286506 FORWARD LENGTH=416
          Length = 416

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/410 (84%), Positives = 381/410 (92%), Gaps = 1/410 (0%)

Query: 1   MAFDKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTV 60
           M F+KIKV NP+VEMDGDEMTRVIWK IKDKLI PFLELDIKYFDLGLP RD TDDKVT+
Sbjct: 1   MEFEKIKVINPVVEMDGDEMTRVIWKFIKDKLIFPFLELDIKYFDLGLPNRDFTDDKVTI 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPILCKNVP 120
           E+AEATLKYNVAIKCATITPDEARV+EFGLK+MWRSPNGTIRNILNGTVFREPI+C+N+P
Sbjct: 61  ETAEATLKYNVAIKCATITPDEARVREFGLKKMWRSPNGTIRNILNGTVFREPIICRNIP 120

Query: 121 RLVPGWTKAICIGRHAFGDQYRATDQVIKGAGKLKLVFVPEGQGEETELEVYNFTGQGGV 180
           RLVPGWTK ICIGRHAFGDQYRATD ++   GKLKLVF P G  ++TE EV+NFTG GGV
Sbjct: 121 RLVPGWTKPICIGRHAFGDQYRATDLIVNEPGKLKLVFEPSGSSQKTEFEVFNFTG-GGV 179

Query: 181 ALAMYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240
           ALAMYNTDESIR+FAE+SM TAY+KKWPLYLSTKNTILK YDGRFKDIFQEVYEA W+SK
Sbjct: 180 ALAMYNTDESIRAFAESSMYTAYQKKWPLYLSTKNTILKIYDGRFKDIFQEVYEANWRSK 239

Query: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300
           YEAAGIWYEHRLIDDMVAYA+KSEGGYVWACKNYDGDVQSDFLAQG+GSLG+MTSVLVCP
Sbjct: 240 YEAAGIWYEHRLIDDMVAYAMKSEGGYVWACKNYDGDVQSDFLAQGYGSLGMMTSVLVCP 299

Query: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLSDFTDK 360
           DGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD NA L  +T+K
Sbjct: 300 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDSNAALLSYTEK 359

Query: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKAKL 410
           LEAAC+G VESGKMTKDLAL++HG+K+ R+ Y+NTEEFIDAVA ELK +L
Sbjct: 360 LEAACMGTVESGKMTKDLALLIHGAKVRRDQYVNTEEFIDAVAWELKRRL 409


>AT5G14590.1 | Symbols:  | Isocitrate/isopropylmalate dehydrogenase
           family protein | chr5:4703533-4706627 REVERSE LENGTH=485
          Length = 485

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/407 (80%), Positives = 359/407 (88%), Gaps = 1/407 (0%)

Query: 4   DKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTVESA 63
           D+I+V NPIVEMDGDEMTRVIW  IK+KLILP+L+LDIKYFDLG+  RD TDDKVTVESA
Sbjct: 74  DRIQVQNPIVEMDGDEMTRVIWSMIKEKLILPYLDLDIKYFDLGILNRDATDDKVTVESA 133

Query: 64  EATLKYNVAIKCATITPDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPILCKNVPRLV 123
           EA LKYNVAIKCATITPDE RVKEFGLK MWRSPNGTIRNIL+GTVFREPI+C N+PRLV
Sbjct: 134 EAALKYNVAIKCATITPDEGRVKEFGLKSMWRSPNGTIRNILDGTVFREPIMCSNIPRLV 193

Query: 124 PGWTKAICIGRHAFGDQYRATDQVIKGAGKLKLVFVPEGQGEETELEVYNFTGQGGVALA 183
           PGW K ICIGRHAFGDQYRATD VIKG GKLK+VFVPE      EL+VY+F G G VALA
Sbjct: 194 PGWEKPICIGRHAFGDQYRATDTVIKGPGKLKMVFVPEDGNAPVELDVYDFKGPG-VALA 252

Query: 184 MYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSKYEA 243
           MYN DESIR+FAE+SMA A  KKWPLYLSTKNTILKKYDGRFKDIFQEVYEA WK K+E 
Sbjct: 253 MYNVDESIRAFAESSMAMALTKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKQKFEE 312

Query: 244 AGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK 303
             IWYEHRLIDDMVAYA+KSEGGYVWACKNYDGDVQSD LAQGFGSLGLMTSVL+  DGK
Sbjct: 313 HSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSADGK 372

Query: 304 TIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLSDFTDKLEA 363
           T+E+EAAHGTVTRHFR+HQKG ETSTNSIASIFAWTRGL HRAKLD N KL DF  KLE+
Sbjct: 373 TLESEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDKNEKLMDFVKKLES 432

Query: 364 ACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKAKL 410
           +C+  VE+GKMTKDLAL++HG K+SR+ +LNTEEFIDAVA++LK + 
Sbjct: 433 SCVNTVETGKMTKDLALLIHGPKVSRDLFLNTEEFIDAVASKLKTQF 479