Miyakogusa Predicted Gene

Lj1g3v0477780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0477780.1 Non Chatacterized Hit- tr|C0PJV2|C0PJV2_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,57.3,3e-18,seg,NULL,CUFF.25898.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74530.3 | Symbols:  | unknown protein; Has 35333 Blast hits ...   376   e-104
AT1G74530.1 | Symbols:  | unknown protein; Has 49 Blast hits to ...   318   4e-87
AT1G74530.2 | Symbols:  | unknown protein; Has 49 Blast hits to ...   273   9e-74

>AT1G74530.3 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr1:28009723-28012044 REVERSE LENGTH=314
          Length = 314

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/300 (59%), Positives = 217/300 (72%), Gaps = 1/300 (0%)

Query: 20  KTVALIWLISAFFFYTLFQMAXXXXXXXXXXXXXXXXXXXTEQRSKLYDKMARDLDEHGA 79
           +T  L W IS   FY+LFQM                     EQ ++LY+KM +DL E+G 
Sbjct: 15  RTAVLFWTISLTIFYSLFQMGIRNSPSTSSPSSDSFVSY-AEQSTRLYNKMEQDLQENGP 73

Query: 80  AFMKHGETSQSLTISDIFTVKDGYVTPVLKAANPPVRANILYLSTEFSVPIAEAVKSIFS 139
            F+K GETSQSL++SD+FT+KDG + PVLK ANPPVRAN+L+LSTE+SVP+ E VK++FS
Sbjct: 74  VFLKQGETSQSLSLSDLFTLKDGKIAPVLKVANPPVRANVLHLSTEYSVPVLEVVKNVFS 133

Query: 140 PHFEKAIWFQNSTMYHFSMFHASHHIVPVPXXXXXXXXXXXXXXXXXXMLCPLKIVLDRV 199
           P+FE  IWFQ+S MYHFSMFHAS+HI  VP                   LCPL+I+LDRV
Sbjct: 134 PYFENTIWFQDSKMYHFSMFHASNHIFSVPATEVEVEAEAAAVKAVAKELCPLEIILDRV 193

Query: 200 VLTSTGVLLGCWQVISGTDPITIRAKLKNVLPRAPEKQLYDASILHTTFARLLGPSSTKE 259
           +LTSTGVLLGCW+V SG DPITIR KL++VLPRAPEKQLYDA+ILHT+ ARLLGP  +  
Sbjct: 194 LLTSTGVLLGCWKVNSGDDPITIRLKLRSVLPRAPEKQLYDAAILHTSLARLLGPPISPT 253

Query: 260 RLETSDDVQFFHELVNRLNNQIHGFKAVVSELWYVEEYDVLALALNGRMNVRKFKLGCSR 319
              + D +Q  HELV RLNNQI GFKA+VSELWYVEE+D+LALAL GRMNVR F LGC++
Sbjct: 254 EAGSDDHLQLLHELVTRLNNQIRGFKAIVSELWYVEEFDLLALALGGRMNVRSFPLGCAK 313


>AT1G74530.1 | Symbols:  | unknown protein; Has 49 Blast hits to 49
           proteins in 19 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr1:28009866-28012044 REVERSE LENGTH=289
          Length = 289

 Score =  318 bits (814), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 153/266 (57%), Positives = 186/266 (69%), Gaps = 1/266 (0%)

Query: 20  KTVALIWLISAFFFYTLFQMAXXXXXXXXXXXXXXXXXXXTEQRSKLYDKMARDLDEHGA 79
           +T  L W IS   FY+LFQM                     EQ ++LY+KM +DL E+G 
Sbjct: 15  RTAVLFWTISLTIFYSLFQMGIRNSPSTSSPSSDSFVSY-AEQSTRLYNKMEQDLQENGP 73

Query: 80  AFMKHGETSQSLTISDIFTVKDGYVTPVLKAANPPVRANILYLSTEFSVPIAEAVKSIFS 139
            F+K GETSQSL++SD+FT+KDG + PVLK ANPPVRAN+L+LSTE+SVP+ E VK++FS
Sbjct: 74  VFLKQGETSQSLSLSDLFTLKDGKIAPVLKVANPPVRANVLHLSTEYSVPVLEVVKNVFS 133

Query: 140 PHFEKAIWFQNSTMYHFSMFHASHHIVPVPXXXXXXXXXXXXXXXXXXMLCPLKIVLDRV 199
           P+FE  IWFQ+S MYHFSMFHAS+HI  VP                   LCPL+I+LDRV
Sbjct: 134 PYFENTIWFQDSKMYHFSMFHASNHIFSVPATEVEVEAEAAAVKAVAKELCPLEIILDRV 193

Query: 200 VLTSTGVLLGCWQVISGTDPITIRAKLKNVLPRAPEKQLYDASILHTTFARLLGPSSTKE 259
           +LTSTGVLLGCW+V SG DPITIR KL++VLPRAPEKQLYDA+ILHT+ ARLLGP  +  
Sbjct: 194 LLTSTGVLLGCWKVNSGDDPITIRLKLRSVLPRAPEKQLYDAAILHTSLARLLGPPISPT 253

Query: 260 RLETSDDVQFFHELVNRLNNQIHGFK 285
              + D +Q  HELV RLNNQI GFK
Sbjct: 254 EAGSDDHLQLLHELVTRLNNQIRGFK 279


>AT1G74530.2 | Symbols:  | unknown protein; Has 49 Blast hits to 49
           proteins in 19 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr1:28009963-28012044 REVERSE LENGTH=262
          Length = 262

 Score =  273 bits (699), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 136/239 (56%), Positives = 166/239 (69%), Gaps = 5/239 (2%)

Query: 20  KTVALIWLISAFFFYTLFQMAXXXXXXXXXXXXXXXXXXXTEQRSKLYDKMARDLDEHGA 79
           +T  L W IS   FY+LFQM                     EQ ++LY+KM +DL E+G 
Sbjct: 15  RTAVLFWTISLTIFYSLFQMGIRNSPSTSSPSSDSFVSY-AEQSTRLYNKMEQDLQENGP 73

Query: 80  AFMKHGETSQSLTISDIFTVKDGYVTPVLKAANPPVRANILYLSTEFSVPIAEAVKSIFS 139
            F+K GETSQSL++SD+FT+KDG + PVLK ANPPVRAN+L+LSTE+SVP+ E VK++FS
Sbjct: 74  VFLKQGETSQSLSLSDLFTLKDGKIAPVLKVANPPVRANVLHLSTEYSVPVLEVVKNVFS 133

Query: 140 PHFEK----AIWFQNSTMYHFSMFHASHHIVPVPXXXXXXXXXXXXXXXXXXMLCPLKIV 195
           P+FE     AI   +S MYHFSMFHAS+HI  VP                   LCPL+I+
Sbjct: 134 PYFENSKPAAITIYDSKMYHFSMFHASNHIFSVPATEVEVEAEAAAVKAVAKELCPLEII 193

Query: 196 LDRVVLTSTGVLLGCWQVISGTDPITIRAKLKNVLPRAPEKQLYDASILHTTFARLLGP 254
           LDRV+LTSTGVLLGCW+V SG DPITIR KL++VLPRAPEKQLYDA+ILHT+ ARLLGP
Sbjct: 194 LDRVLLTSTGVLLGCWKVNSGDDPITIRLKLRSVLPRAPEKQLYDAAILHTSLARLLGP 252