Miyakogusa Predicted Gene
- Lj1g3v0451230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0451230.1 Non Chatacterized Hit- tr|K3Z7K0|K3Z7K0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022520,35.43,0.000000000000001,HSP20,Alpha crystallin/Hsp20
domain; no description,NULL; seg,NULL; HSP20-like
chaperones,HSP20-like,NODE_52273_length_779_cov_10.717587.path1.1
(233 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27140.1 | Symbols: | HSP20-like chaperones superfamily prot... 64 9e-11
AT5G20970.1 | Symbols: | HSP20-like chaperones superfamily prot... 59 2e-09
AT5G04890.1 | Symbols: RTM2 | HSP20-like chaperones superfamily ... 56 2e-08
AT3G10680.1 | Symbols: | HSP20-like chaperones superfamily prot... 52 3e-07
AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superfa... 50 1e-06
AT1G07400.1 | Symbols: | HSP20-like chaperones superfamily prot... 48 5e-06
AT1G53540.1 | Symbols: | HSP20-like chaperones superfamily prot... 48 6e-06
AT4G21870.1 | Symbols: | HSP20-like chaperones superfamily prot... 48 7e-06
>AT2G27140.1 | Symbols: | HSP20-like chaperones superfamily protein
| chr2:11598496-11599264 REVERSE LENGTH=224
Length = 224
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 29 EEIVPNSGWTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQKRVHFQLVF 88
+E P S W + L + LP FRKE++K+QV + ++ V G+R A K + F+ F
Sbjct: 15 DEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKWIRFRKEF 74
Query: 89 PVPVDSDTDKLAGHFDGGILYVTVPK 114
P+P + D D ++ F+G L V +P+
Sbjct: 75 PIPPNIDVDSVSAKFEGANLVVRLPR 100
>AT5G20970.1 | Symbols: | HSP20-like chaperones superfamily protein
| chr5:7123132-7124001 FORWARD LENGTH=249
Length = 249
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%)
Query: 29 EEIVPNSGWTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQKRVHFQLVF 88
+E P + WT + L+ DLP F+KE++K+ V + ++ + GER K + F
Sbjct: 11 QEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRFHQEI 70
Query: 89 PVPVDSDTDKLAGHFDGGILYVTVPKRVAE 118
PVP+ D D ++ F LY+ PK E
Sbjct: 71 PVPLTVDIDSVSAMFKDNKLYIRHPKLKTE 100
>AT5G04890.1 | Symbols: RTM2 | HSP20-like chaperones superfamily
protein | chr5:1427217-1428390 FORWARD LENGTH=366
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 29 EEIVPNSGWTEDSAGHYLLVDLPEFRKEEVKLQ-VDSYGRIVVKGERQANEQKRVHFQLV 87
E+ VP S W + L +DL F KE++K+ V S I V GER +K F V
Sbjct: 17 EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEV 76
Query: 88 FPVPVDSDTDKLAGHFDGGILYVTVPK 114
F VP + DK+ G F +L +T+PK
Sbjct: 77 FTVPQNCLVDKIHGSFKNNVLTITMPK 103
>AT3G10680.1 | Symbols: | HSP20-like chaperones superfamily protein
| chr3:3337773-3339345 FORWARD LENGTH=490
Length = 490
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 33 PNSGWTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIV-VKGERQANEQKRVHFQLVFPVP 91
P + WT + +L V+LP F +++++++ D R V ++G+R + Q + F + VP
Sbjct: 28 PRAQWTNSGSSIFLYVNLPGFYRDQIEIKKDERTRTVQIQGQRPLSAQTKARFSEAYRVP 87
Query: 92 VDSDTDKLAGHFDGGILYVTVP---------------KRVAEEKNQESEAEKAGNGDVAE 136
D KL+ F G+L + P +++ + NQE NG
Sbjct: 88 DTCDMTKLSTSFSHGLLTIEFPAIVEANKQEKAVQDQEKIGQRSNQEKSGGPGPNGSTLG 147
Query: 137 AERAQEHDSH 146
++A E +
Sbjct: 148 RKKALEEEKQ 157
>AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones
superfamily protein | chr4:6370537-6371124 FORWARD
LENGTH=195
Length = 195
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 37 WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQK------RVH-----FQ 85
W E + GH +++D+P +K+EVK++V+ G + V GER+ E+K RV F
Sbjct: 75 WKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFW 134
Query: 86 LVFPVPVDSDTDKLAGHFDGGILYVTVPK 114
F +P + D + + + G+L + + K
Sbjct: 135 RQFKLPDNVDMESVKAKLENGVLTINLTK 163
>AT1G07400.1 | Symbols: | HSP20-like chaperones superfamily protein
| chr1:2275148-2275621 FORWARD LENGTH=157
Length = 157
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 37 WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQKRV-----------HFQ 85
W E + H DLP +KEEVK++++ + + GER ++++ F
Sbjct: 52 WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111
Query: 86 LVFPVPVDSDTDKLAGHFDGGILYVTVPK 114
F +P + D++ + G+L VTVPK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140
>AT1G53540.1 | Symbols: | HSP20-like chaperones superfamily protein
| chr1:19980510-19980983 FORWARD LENGTH=157
Length = 157
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 37 WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGER-QANEQK-----RVH-----FQ 85
W E H DLP RKEEVK++V+ + + GER NE+K RV F
Sbjct: 54 WRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFT 113
Query: 86 LVFPVPVDSDTDKLAGHFDGGILYVTVPKRVAEEK 120
F +P ++ +++ + G+L VTVPK V E+K
Sbjct: 114 RRFRLPENAKMEEIKASMENGVLSVTVPK-VPEKK 147
>AT4G21870.1 | Symbols: | HSP20-like chaperones superfamily protein
| chr4:11603756-11604285 REVERSE LENGTH=134
Length = 134
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 37 WTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGE---RQANEQKRVHFQLVFPVPVD 93
W++ H VDLP RKEE+K++++ ++++ E +Q F+ F +P
Sbjct: 30 WSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFRLPES 89
Query: 94 SDTDKLAGHFDGGILYVTVPKRVAEEK 120
D ++ ++ G+L V VPKR+ +
Sbjct: 90 IDMIGISAGYEDGVLTVIVPKRIMTRR 116