Miyakogusa Predicted Gene

Lj1g3v0438910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0438910.1 Non Chatacterized Hit- tr|H3ASX4|H3ASX4_LATCH
Uncharacterized protein (Fragment) OS=Latimeria chalum,38.35,2e-19,no
description,Six-bladed beta-propeller, TolB-like;
GSDH,Glucose/Sorbosone dehydrogenase; THYROID H,CUFF.25860.1
         (154 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74790.1 | Symbols:  | catalytics | chr1:28098912-28101673 FO...   228   8e-61
AT5G39970.1 | Symbols:  | catalytics | chr5:15998155-16000751 FO...   186   8e-48
AT5G62630.1 | Symbols: HIPL2 | hipl2 protein precursor | chr5:25...   185   1e-47

>AT1G74790.1 | Symbols:  | catalytics | chr1:28098912-28101673
           FORWARD LENGTH=695
          Length = 695

 Score =  228 bits (582), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 114/136 (83%)

Query: 1   MNLWGNYSVPKDNPYLDDKELEPEIWAIGFKNAWRCSFDSQRPSYFLCGDAGQDKYEEID 60
           M LWGNYS+PKDNP+ +DKELEPEIWA+G +N WRCSFDS RPSYF+C D GQD YEE+D
Sbjct: 424 MGLWGNYSIPKDNPFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDTYEEVD 483

Query: 61  VIKKGKNYGWRVYEGPFIFHPSESPGGNTSTSSIHPIFPVMGYNHSEIDNESGSASIVGG 120
           +I KG NYGWRVYEGP +FHP  SPGGNTS  S++PIFPVMGYNHSE+D+   SASI GG
Sbjct: 484 LISKGGNYGWRVYEGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSASITGG 543

Query: 121 YFYRAMTDPCLYGRLV 136
           YFYR+ TDPC+ GR V
Sbjct: 544 YFYRSETDPCIAGRYV 559


>AT5G39970.1 | Symbols:  | catalytics | chr5:15998155-16000751
           FORWARD LENGTH=690
          Length = 690

 Score =  186 bits (471), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 105/133 (78%), Gaps = 2/133 (1%)

Query: 3   LWGNYSVPKDNPYLDDKELEPEIWAIGFKNAWRCSFDSQRPSYFLCGDAGQDKYEEIDVI 62
           LWGNYS+PKDNP+  DK L PEIWA+G +N WRCSFDS+RPSYFLC D G+D+YEE+D+I
Sbjct: 420 LWGNYSIPKDNPFSQDKNLLPEIWAMGVRNPWRCSFDSERPSYFLCADVGEDQYEEVDMI 479

Query: 63  KKGKNYGWRVYEGPFIFHPSESPGGNTSTSSI-HPIFPVMGYNHSEIDNESG-SASIVGG 120
            KG NYGW  YEG   FHPS S   + ST+ I +PIFPVM YNHS+I+ + G SASI GG
Sbjct: 480 TKGGNYGWHYYEGTLPFHPSSSSNISNSTTKIENPIFPVMWYNHSDINQQEGSSASITGG 539

Query: 121 YFYRAMTDPCLYG 133
           YFYR+ TDPCLYG
Sbjct: 540 YFYRSSTDPCLYG 552


>AT5G62630.1 | Symbols: HIPL2 | hipl2 protein precursor |
           chr5:25143719-25146390 REVERSE LENGTH=696
          Length = 696

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 1/133 (0%)

Query: 1   MNLWGNYSVPKDNPYLDDKELEPEIWAIGFKNAWRCSFDSQRPSYFLCGDAGQDKYEEID 60
           + LWGNYS+PK+NP+  ++  +PEIWA+G +N WRCSFDS+RP YFLC D G+D YEE+D
Sbjct: 426 LGLWGNYSIPKNNPFQGNENEQPEIWALGLRNPWRCSFDSERPDYFLCADVGKDTYEEVD 485

Query: 61  VIKKGKNYGWRVYEGPFIFHPSESPGGNTSTSSIHPIFPVMGYNHSEIDNESGSASIVGG 120
           +I  G NYGWR YEGP++F P  SP G   +S  +  FP++GYNHSE++   GSASI+GG
Sbjct: 486 IITMGGNYGWRTYEGPYVFSP-LSPFGENVSSDSNLTFPILGYNHSEVNKHEGSASIIGG 544

Query: 121 YFYRAMTDPCLYG 133
           YFYR+ TDPC YG
Sbjct: 545 YFYRSNTDPCSYG 557