Miyakogusa Predicted Gene

Lj1g3v0437870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0437870.1 Non Chatacterized Hit- tr|I1LIT7|I1LIT7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90,0,TRANSCRIPTION
INITIATION FACTOR IIIC (TFIIIC), POLYPEPTIDE 3-RELATED,NULL;
TPR-like,NULL; no descrip,CUFF.25879.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17680.2 | Symbols:  | tetratricopeptide repeat (TPR)-contain...   406   e-113
AT1G17680.1 | Symbols:  | tetratricopeptide repeat (TPR)-contain...   406   e-113

>AT1G17680.2 | Symbols:  | tetratricopeptide repeat (TPR)-containing
           protein | chr1:6076388-6082160 FORWARD LENGTH=896
          Length = 896

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 189/283 (66%), Positives = 230/283 (81%)

Query: 38  LLKVEEHHQLIIDLCKALSSLRRYGEALEIINLTLRLAHTSLSAEKKEELRSLGAQMAYN 97
           ++K EE+H+L +DLCKAL+SL+RY EALEI+NL  RL    L  E K+EL+SLGA+++ +
Sbjct: 614 VIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARRLDAKMLPVETKKELQSLGAKISCD 673

Query: 98  NTDPKHGFDCVKYIVQQYPHSVAAWNCYYKVISRLENRDTRHYKFIRGMQGKFADCVPPI 157
             DPK  FDCV+ ++QQ+P+ + AWNCYY VISRL  R +   KF+  ++ K+ DCVPPI
Sbjct: 674 TMDPKQWFDCVRSVIQQHPYRLNAWNCYYSVISRLGKRASTEAKFMHHLRSKYRDCVPPI 733

Query: 158 LISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVLQG 217
           LI+GH FT+ S HQDAAR+YLEAYKL+PE+PL+NLCVG ALINLALG RL+N+H+C+ QG
Sbjct: 734 LIAGHHFTVTSRHQDAAREYLEAYKLMPESPLINLCVGAALINLALGFRLKNRHECLAQG 793

Query: 218 LAFLYNNLRICENSQESLYNIARAFHHVGLVTLAALYYEKVIAICEKDYPIPKLPNEAPD 277
            AFLYNNLRIC NSQE+LYN+ARA+ HVGLVTLAA YYEKV+AI EKDY +PKLPNE P 
Sbjct: 794 FAFLYNNLRICSNSQEALYNVARAYQHVGLVTLAASYYEKVLAIYEKDYTMPKLPNEDPI 853

Query: 278 VMENRKPGYCDLRREAAFNLHLIYKKSGALDLARQVLKDHCTL 320
           V E RKP  CDLR+EAA NLHLIYK SGA DLARQVLKDHCT 
Sbjct: 854 VAEERKPVNCDLRKEAAHNLHLIYKHSGAFDLARQVLKDHCTF 896


>AT1G17680.1 | Symbols:  | tetratricopeptide repeat (TPR)-containing
           protein | chr1:6076388-6082160 FORWARD LENGTH=896
          Length = 896

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 189/283 (66%), Positives = 230/283 (81%)

Query: 38  LLKVEEHHQLIIDLCKALSSLRRYGEALEIINLTLRLAHTSLSAEKKEELRSLGAQMAYN 97
           ++K EE+H+L +DLCKAL+SL+RY EALEI+NL  RL    L  E K+EL+SLGA+++ +
Sbjct: 614 VIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARRLDAKMLPVETKKELQSLGAKISCD 673

Query: 98  NTDPKHGFDCVKYIVQQYPHSVAAWNCYYKVISRLENRDTRHYKFIRGMQGKFADCVPPI 157
             DPK  FDCV+ ++QQ+P+ + AWNCYY VISRL  R +   KF+  ++ K+ DCVPPI
Sbjct: 674 TMDPKQWFDCVRSVIQQHPYRLNAWNCYYSVISRLGKRASTEAKFMHHLRSKYRDCVPPI 733

Query: 158 LISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVLQG 217
           LI+GH FT+ S HQDAAR+YLEAYKL+PE+PL+NLCVG ALINLALG RL+N+H+C+ QG
Sbjct: 734 LIAGHHFTVTSRHQDAAREYLEAYKLMPESPLINLCVGAALINLALGFRLKNRHECLAQG 793

Query: 218 LAFLYNNLRICENSQESLYNIARAFHHVGLVTLAALYYEKVIAICEKDYPIPKLPNEAPD 277
            AFLYNNLRIC NSQE+LYN+ARA+ HVGLVTLAA YYEKV+AI EKDY +PKLPNE P 
Sbjct: 794 FAFLYNNLRICSNSQEALYNVARAYQHVGLVTLAASYYEKVLAIYEKDYTMPKLPNEDPI 853

Query: 278 VMENRKPGYCDLRREAAFNLHLIYKKSGALDLARQVLKDHCTL 320
           V E RKP  CDLR+EAA NLHLIYK SGA DLARQVLKDHCT 
Sbjct: 854 VAEERKPVNCDLRKEAAHNLHLIYKHSGAFDLARQVLKDHCTF 896