Miyakogusa Predicted Gene

Lj1g3v0426800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0426800.1 Non Chatacterized Hit- tr|H0ZCM2|H0ZCM2_TAEGU
Uncharacterized protein (Fragment) OS=Taeniopygia gutt,33.14,6e-19,no
description,5-formyltetrahydrofolate cyclo-ligase-like domain;
5-FORMYLTETRAHYDROFOLATE CYCLO-LIG,CUFF.25854.1
         (273 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13050.1 | Symbols: 5-FCL | 5-formyltetrahydrofolate cyclolig...   273   7e-74
AT5G13050.2 | Symbols: 5-FCL | 5-formyltetrahydrofolate cyclolig...   195   3e-50

>AT5G13050.1 | Symbols: 5-FCL | 5-formyltetrahydrofolate cycloligase
           | chr5:4136912-4138711 REVERSE LENGTH=277
          Length = 277

 Score =  273 bits (699), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 135/224 (60%), Positives = 168/224 (75%)

Query: 45  HDDLDAIFKQKRILRTQVKKTLKSIDPSLRSQQDNAIQDIILGAPWFKSSARLCAYISCS 104
            ++LD+IFKQKR++R+ V+K+LK++DPSLR+QQD AIQ  +L APWFKS   LCAYISC 
Sbjct: 50  QEELDSIFKQKRVVRSTVRKSLKAMDPSLRTQQDEAIQKTVLEAPWFKSCKGLCAYISCK 109

Query: 105 ALREVDTSKLLSEILQPSAATGGKKLYVPRVEDKNSHMRMLNISRIDDLVANSMDILEPA 164
           +L EVDTSK+LSEILQ   +   KKLYVP VEDKNS+MRML+IS ++DLVANSM+ILEPA
Sbjct: 110 SLNEVDTSKILSEILQHPDSNTQKKLYVPWVEDKNSNMRMLHISHMEDLVANSMNILEPA 169

Query: 165 PVDADGNAREDVMQAXXXXXXXXXXXXAFDXXXXXXXXXXXYYDTFLESYQHLAKTRNWK 224
           PVDA GN REDV+QA            AFD           YYDTFL+ YQ  AK + W+
Sbjct: 170 PVDAQGNDREDVLQADEPIDLFILPGLAFDRCGRRLGRGGGYYDTFLKRYQDRAKEKGWR 229

Query: 225 QPLLVALSYSQQILDEGVIPMTSSDVPVDALVTPAGVIPISTEA 268
            PL+VALSYS QIL++G IP+T +DV +DALVTP+GV+PI+  A
Sbjct: 230 YPLMVALSYSPQILEDGSIPVTPNDVLIDALVTPSGVVPITPRA 273


>AT5G13050.2 | Symbols: 5-FCL | 5-formyltetrahydrofolate cycloligase
           | chr5:4137262-4138711 REVERSE LENGTH=214
          Length = 214

 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/150 (64%), Positives = 117/150 (78%)

Query: 45  HDDLDAIFKQKRILRTQVKKTLKSIDPSLRSQQDNAIQDIILGAPWFKSSARLCAYISCS 104
            ++LD+IFKQKR++R+ V+K+LK++DPSLR+QQD AIQ  +L APWFKS   LCAYISC 
Sbjct: 50  QEELDSIFKQKRVVRSTVRKSLKAMDPSLRTQQDEAIQKTVLEAPWFKSCKGLCAYISCK 109

Query: 105 ALREVDTSKLLSEILQPSAATGGKKLYVPRVEDKNSHMRMLNISRIDDLVANSMDILEPA 164
           +L EVDTSK+LSEILQ   +   KKLYVP VEDKNS+MRML+IS ++DLVANSM+ILEPA
Sbjct: 110 SLNEVDTSKILSEILQHPDSNTQKKLYVPWVEDKNSNMRMLHISHMEDLVANSMNILEPA 169

Query: 165 PVDADGNAREDVMQAXXXXXXXXXXXXAFD 194
           PVDA GN REDV+QA            AFD
Sbjct: 170 PVDAQGNDREDVLQADEPIDLFILPGLAFD 199