Miyakogusa Predicted Gene

Lj1g3v0416350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0416350.1 tr|B9H4M3|B9H4M3_POPTR PAD4 OS=Populus
trichocarpa GN=POPTRDRAFT_558462 PE=4
SV=1,31.34,6e-19,alpha/beta-Hydrolases,NULL; Lipase_3,Lipase, class 3;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,CUFF.25838.1
         (281 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48090.1 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases supe...   200   1e-51
AT3G48090.2 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases supe...   199   1e-51
AT3G48080.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   196   2e-50
AT3G52430.1 | Symbols: PAD4, ATPAD4 | alpha/beta-Hydrolases supe...    61   8e-10
AT3G07400.1 | Symbols:  | lipase class 3 family protein | chr3:2...    53   2e-07

>AT3G48090.1 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases
           superfamily protein | chr3:17755553-17757692 REVERSE
           LENGTH=623
          Length = 623

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 165/268 (61%), Gaps = 23/268 (8%)

Query: 4   QKKIVFTGHSSGAPMAILASLWTLEKYLTPKSHREIPLLCVTSGSPLVGNHIFSHATARE 63
           +K+IVFTGHSSG   AILA++W LEKY     +  +   CVT G+PLVG+ IFSHA  RE
Sbjct: 114 RKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGRE 173

Query: 64  NWSRYFFHFVMKHDIVPRILLAPLSSLDQSLEPVSQFFNPKSKSFMNESIGRVTEASDFY 123
            WSR+F +FV + DIVPRI+LA  +S++++L  V    +P+ KS + ES  R+TE   FY
Sbjct: 174 KWSRFFVNFVSRFDIVPRIMLARKASVEETLPHVLAQLDPR-KSSVQESEQRITE---FY 229

Query: 124 FAVMSSAASVTSHAACKLMGTTDAALETLANFFPMSPYRPFGTYIFCIANGKEAKQIVVR 183
             VM   ++V + A C+L G+ +A LETL++F  +SPYRP GT++F      E + + V 
Sbjct: 230 TRVMRDTSTVANQAVCELTGSAEAFLETLSSFLELSPYRPAGTFVFST----EKRLVAVN 285

Query: 184 NPDAVLQLLFFSAQINTETEADQVPYRSLREHVINDTELQQTLRMQNVVYLDQLGKLPLP 243
           N DA+LQ+LF+++Q + E E   +P+RS+R+H   + EL Q++  +   +LD        
Sbjct: 286 NSDAILQMLFYTSQASDEQEWSLIPFRSIRDHHSYE-ELVQSMGKKLFNHLD-------- 336

Query: 244 EDSSSGDTAEINMALNDLGLVSNISCYC 271
                G+ + I   LNDLG+ +    Y 
Sbjct: 337 -----GENS-IESTLNDLGVSTRGRQYV 358


>AT3G48090.2 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases
           superfamily protein | chr3:17755553-17757292 REVERSE
           LENGTH=515
          Length = 515

 Score =  199 bits (507), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 165/268 (61%), Gaps = 23/268 (8%)

Query: 4   QKKIVFTGHSSGAPMAILASLWTLEKYLTPKSHREIPLLCVTSGSPLVGNHIFSHATARE 63
           +K+IVFTGHSSG   AILA++W LEKY     +  +   CVT G+PLVG+ IFSHA  RE
Sbjct: 6   RKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGRE 65

Query: 64  NWSRYFFHFVMKHDIVPRILLAPLSSLDQSLEPVSQFFNPKSKSFMNESIGRVTEASDFY 123
            WSR+F +FV + DIVPRI+LA  +S++++L  V    +P+ KS + ES  R+TE   FY
Sbjct: 66  KWSRFFVNFVSRFDIVPRIMLARKASVEETLPHVLAQLDPR-KSSVQESEQRITE---FY 121

Query: 124 FAVMSSAASVTSHAACKLMGTTDAALETLANFFPMSPYRPFGTYIFCIANGKEAKQIVVR 183
             VM   ++V + A C+L G+ +A LETL++F  +SPYRP GT++F      E + + V 
Sbjct: 122 TRVMRDTSTVANQAVCELTGSAEAFLETLSSFLELSPYRPAGTFVFST----EKRLVAVN 177

Query: 184 NPDAVLQLLFFSAQINTETEADQVPYRSLREHVINDTELQQTLRMQNVVYLDQLGKLPLP 243
           N DA+LQ+LF+++Q + E E   +P+RS+R+H   + EL Q++  +   +LD        
Sbjct: 178 NSDAILQMLFYTSQASDEQEWSLIPFRSIRDHHSYE-ELVQSMGKKLFNHLD-------- 228

Query: 244 EDSSSGDTAEINMALNDLGLVSNISCYC 271
                G+ + I   LNDLG+ +    Y 
Sbjct: 229 -----GENS-IESTLNDLGVSTRGRQYV 250


>AT3G48080.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:17753104-17755145 REVERSE LENGTH=629
          Length = 629

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/273 (40%), Positives = 171/273 (62%), Gaps = 17/273 (6%)

Query: 1   MSKQKKIVFTGHSSGAPMAILASLWTLEKYLTPKSHREIPLLCVTSGSPLVGNHIFSHAT 60
           + +++++VFTGHS G   AILA++W LE Y    ++      CVT G+PLVG++IF HA 
Sbjct: 111 VDRKQQVVFTGHSFGGATAILATVWYLETYFIRDAYAAPEPRCVTFGAPLVGDYIFKHAL 170

Query: 61  ARENWSRYFFHFVMKHDIVPRILLAPLSSLDQSLEPVSQFFNPKSKSFMNESIGRVTEAS 120
            RENWSR+F +FV + DIVPRI+LA  ++++Q+L  V    +  +++ ++ES   +TE  
Sbjct: 171 GRENWSRFFVNFVTRFDIVPRIMLARKTTIEQTLSYVLGKLD-STRAPIHESDQVITE-- 227

Query: 121 DFYFAVMSSAASVTSHAACKLMGTTDAALETLANFFPMSPYRPFGTYIFCIANGKEAKQI 180
            FY  VM    +V S A C+L+G  +A LETL++F+ +SPYRP GT++F      + + +
Sbjct: 228 -FYTRVMRDTYTVASKAVCQLIGNGEAFLETLSSFYELSPYRPVGTFVFST----QKRLV 282

Query: 181 VVRNPDAVLQLLFFSAQINTETEADQVPYRSLREHVINDTELQQTLRMQNVVYLDQLGKL 240
           VV N DA+LQ+LF++ Q N E E   +P+ S+R+H   + EL Q++ ++ + +LD    L
Sbjct: 283 VVNNSDAILQMLFYTCQSNDEQELSVIPFLSIRDHHGYE-ELVQSIGIKLLNHLDLHNPL 341

Query: 241 PLPEDSSSGDTAEINMALNDLGLVSNISCYCIH 273
              E+S       I  AL+DLG+ S  +  CIH
Sbjct: 342 LDGENS-------IGSALDDLGM-STRARQCIH 366


>AT3G52430.1 | Symbols: PAD4, ATPAD4 | alpha/beta-Hydrolases
           superfamily protein | chr3:19431566-19434292 FORWARD
           LENGTH=541
          Length = 541

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 7   IVFTGHSSGAPMAILASLWTLEKYLTPKSHREIPLLCVTSGSPLVGNHIFSHATARENWS 66
           +V TGHS+G  +A   +LW L +  +P S R   + C+T GSPL+GN   S + +R   +
Sbjct: 112 VVITGHSTGGALAAFTALWLLSQS-SPPSFR---VFCITFGSPLLGNQSLSTSISRSRLA 167

Query: 67  RYFFHFVMKHDIVPR 81
             F H V  HD+VPR
Sbjct: 168 HNFCHVVSIHDLVPR 182


>AT3G07400.1 | Symbols:  | lipase class 3 family protein |
           chr3:2367456-2372238 FORWARD LENGTH=1003
          Length = 1003

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 3   KQKKIVFTGHSSGAPMAILASLWTLEKYL--TPKSHREIPLLCVTSGSPLVGNHIFSHAT 60
           K++K+V  GHS G  +A LA+L  L      + + +  I + C+T   P VGN       
Sbjct: 225 KKRKLVLCGHSLGGAVAALATLAILRVVAASSKRGNENIHVKCITFSQPPVGNAALRDYV 284

Query: 61  ARENWSRYFFHFVMKHDIVPRIL 83
             + W  YF  + +  D+VPRIL
Sbjct: 285 HEKGWHHYFKSYCIPEDLVPRIL 307