Miyakogusa Predicted Gene
- Lj1g3v0415920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0415920.1 Non Chatacterized Hit- tr|I1GN14|I1GN14_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,25.71,2e-18,seg,NULL; PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
FA,CUFF.25790.1
(504 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 568 e-162
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 7e-52
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 6e-48
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 7e-47
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 181 8e-46
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 3e-44
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 5e-44
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 9e-44
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 174 1e-43
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 172 7e-43
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 169 3e-42
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 4e-42
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 167 2e-41
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 5e-41
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 3e-39
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 5e-39
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 5e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 8e-37
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 9e-37
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 3e-36
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 150 3e-36
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 4e-35
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 9e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 1e-33
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 139 3e-33
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 4e-33
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 6e-33
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 7e-33
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 137 1e-32
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 136 3e-32
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 3e-32
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 7e-32
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 135 9e-32
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 132 4e-31
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 132 6e-31
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 8e-30
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 126 4e-29
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 125 9e-29
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 124 2e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 118 1e-26
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 118 1e-26
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 3e-26
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 108 8e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 102 6e-22
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 100 2e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 100 4e-21
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 6e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 93 4e-19
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 88 1e-17
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 85 1e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 85 1e-16
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 84 2e-16
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 83 3e-16
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 81 1e-15
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 80 3e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 79 7e-15
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 78 1e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 77 2e-14
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 77 4e-14
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 76 4e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 76 5e-14
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 76 5e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 76 6e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 76 7e-14
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 75 9e-14
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 75 9e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 75 1e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 74 2e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 74 3e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 73 4e-13
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 73 6e-13
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 70 2e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 70 4e-12
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 68 1e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 65 1e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 65 2e-10
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 65 2e-10
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 65 2e-10
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 64 3e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 63 4e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 9e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 62 1e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 60 5e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 59 9e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 59 9e-09
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 54 3e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 52 1e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 51 2e-06
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 50 3e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 50 5e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 568 bits (1464), Expect = e-162, Method: Compositional matrix adjust.
Identities = 268/425 (63%), Positives = 326/425 (76%), Gaps = 32/425 (7%)
Query: 76 WTPELVDEVLKRLWNHGPKALQFFKHLDRHP-TYIHSPSGFEHAIDIAARMRDYTTAWTL 134
WTP LV+ VLKRLWNHGPKALQFF LD H Y+H S F+ AIDIAAR+ + T W+L
Sbjct: 54 WTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 113
Query: 135 VSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK 194
+ RMRSLR GP+P+ FAI+AERYA+AGKP +AV++F++MHEHGC QDL SFNTILDVLCK
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 173
Query: 195 TKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
+KRVE A+ LF+ RGRF D+V+YN+I NGWCLIKRTP AL+VLKEM ERGI+P + TY
Sbjct: 174 SKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
NT+LKG+FR Q+R AWEFFLEMKKR CEIDVVTYTT+VHGFGVAGE+K+++ VFDEM+R
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
G++PSVATYNA+IQVLCKKD V+NA+++FEEMV +G PN+ TYNV+IRGL H+G+ R
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
E M RME G P+ QTYN++IRY+ + E+EK L +FEKMG G CLPNLDTYN+L
Sbjct: 354 GEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG--DCLPNLDTYNIL 411
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSR 494
IS MFVRK+SED+VVA GNQ FAKEILR+QS+
Sbjct: 412 ISGMFVRKRSEDMVVA-----------------------------GNQAFAKEILRLQSK 442
Query: 495 CGHAL 499
G L
Sbjct: 443 SGSRL 447
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 213/418 (50%), Gaps = 7/418 (1%)
Query: 55 KLVLESDPGTLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSG 114
K+++ S L AL+ S R + E+V++VL R N G +FF+ ++ Y HS
Sbjct: 77 KVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRA 136
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ I+ A++R Y W L++ MR ++ F I+ +YA A K A+ F M
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRK-KKMLNVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM 234
++ +L +FN +L LCK+K V A +F+ R RF DS +Y+I+ GW P
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPK 255
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A +V +EM + G P +VTY+ ++ + ++ EA M C+ Y+ +VH
Sbjct: 256 AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVH 315
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
+G ++++ F EM R+G+ VA +N+LI CK + ++N V +EM KG P
Sbjct: 316 TYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N + N+++R L G+ + A + +M K P TY +VI+ FC+ E+E ++
Sbjct: 376 NSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVW 434
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
+ M P++ T++VLI+ + + ++ V LL EM++ G P TF R+
Sbjct: 435 KYMRKK--GVFPSMHTFSVLINGLCEERTTQKACV---LLEEMIEMGIRPSGVTFGRL 487
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 17/279 (6%)
Query: 67 EALENSPFRWTPEL-VDEVLKRLWNHGP---KALQFFKHLDR---HPTYIHSPSGFEHAI 119
E EN R+TP+ +L W P KA + F+ + HP + + +
Sbjct: 224 EVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIV----TYSIMV 279
Query: 120 DIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCR 179
DI + A +V M PT +++L Y + AV F+ M G +
Sbjct: 280 DILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMK 339
Query: 180 QDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKR--TPMAL 236
D+ FN+++ CK R++ + + K + + +S S NII LI+R A
Sbjct: 340 ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH--LIERGEKDEAF 397
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
V ++M + P TY ++K + ++ A + + M+K+ + T++ +++G
Sbjct: 398 DVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 456
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
+K+ + +EM+ G+ PS T+ L Q+L K++
Sbjct: 457 CEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N+ T+ +V+R + ++ A+ MEK+ + P++ +N ++ C + + K +F
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
E M D P+ TY++L+ K +L A ++ EM+D G P T++ +++
Sbjct: 227 ENMRD---RFTPDSKTYSILLEGW---GKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280
Query: 475 GLALTGNQEFAKEILR 490
L G + A I+R
Sbjct: 281 ILCKAGRVDEALGIVR 296
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 222/495 (44%), Gaps = 79/495 (15%)
Query: 68 ALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRD 127
AL S P L++ VL R + G +FF + P Y HS ++ + I ++MR
Sbjct: 103 ALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQ 162
Query: 128 YTTAWTLVSRMRSLRRGPT---PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+ W L+ MR + P P F +L +R+A+A +A+ V M + G D
Sbjct: 163 FGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYV 220
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
F +LD LCK V+ A LF+ R RF + + + GWC + + A VL +M E
Sbjct: 221 FGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 280
Query: 245 RGISPTMVTYNTLLKGYF-----------------------------------RCHQLRE 269
G P +V Y LL GY + ++ E
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A + F+EM++ +CE DVVTYT +V GF G++ K V D+M++ GL+PS TY ++
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV 400
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
KK+ + L + E+M P++ YNVVIR C G+++ AV ME++G+ P
Sbjct: 401 AHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKM-------------------------------G 418
V T+ ++I G + + F++M
Sbjct: 461 GVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKD 520
Query: 419 DGSC-----SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
SC +C N+ ++ + I A+F + ++ A IEM++ F+P+ TF +++
Sbjct: 521 VWSCITSKGACELNVLSWTIWIHALFSKGYEKE---ACSYCIEMIEMDFMPQPDTFAKLM 577
Query: 474 NGLALTGNQEFAKEI 488
GL N+EFA EI
Sbjct: 578 KGLKKLYNREFAGEI 592
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 186/353 (52%), Gaps = 6/353 (1%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A +++ +M L P L + + AV + M E G + D+ ++N I
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 189 LDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
+D LCKTKRV A FK R R + V+Y + NG C R A ++L +M ++ I
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+P ++TY+ LL + + ++ EA E F EM + + D+VTY+++++G + + ++ +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+FD MV G + V +YN LI CK V++ + +F EM +G V N TYN +I+G
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+GD+++A E+ +M+ GI P + TYN+++ CD GE+EK L +FE M +
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL--D 434
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
+ TY +I M K E+ A L + +G P T+ +++GL G
Sbjct: 435 IVTYTTVIRGMCKTGKVEE---AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 141/279 (50%), Gaps = 3/279 (1%)
Query: 142 RRGPTPRA--FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
R+G P + L + + A R+ M + ++ +++ +LD K +V
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 200 MAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
A LF+ R D V+Y+ + NG CL R A Q+ M +G +V+YNTL+
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
G+ + ++ + + F EM +R + VTY T++ GF AG+V K++ F +M G+
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P + TYN L+ LC ++ AL++FE+M + ++ TY VIRG+C +G +E A
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+ G++P + TY ++ C G + + +++ KM
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 156/327 (47%), Gaps = 6/327 (1%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYN 220
K + A+ +F M + + FN +L + K K+ ++ SL K R D ++N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
I+ N +C + +AL +L +M + G P VT +L+ G+ R +++ +A +M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
+ D+V Y ++ V + F E+ R G+ P+V TY AL+ LC +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
+ +M+ K PN+ TY+ ++ +G + A E M + I P + TY+ +I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
C I++ MF+ M S CL ++ +YN LI+ K+ ED KL EM R
Sbjct: 305 LCLHDRIDEANQMFDLM--VSKGCLADVVSYNTLINGFCKAKRVED---GMKLFREMSQR 359
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKE 487
G + T+N ++ G G+ + A+E
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 217 VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLE 276
V +N + + +K+ + + + K+M GI + T+N ++ + C Q+ A +
Sbjct: 86 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
M K E D VT ++V+GF V + + D+MV G P + YNA+I LCK
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
V +A F+E+ KG PN+ TY ++ GLC+S A + M K I P+V TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
++ F G++ + +FE+M S P++ TY+ LI+ + + + ++ A ++
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSID--PDIVTYSSLINGLCLHDRIDE---ANQMFDL 320
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
MV +G L ++N ++NG E ++ R S+ G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 200/427 (46%), Gaps = 13/427 (3%)
Query: 68 ALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRD 127
AL S P L+ VL R + G +FF + P Y HS + + I ++MR
Sbjct: 87 ALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQ 146
Query: 128 YTTAWTLVSRMRSLRRGPT---PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+ W L+ MR + P P F +L R+A+A +AV V M ++G D
Sbjct: 147 FGAVWGLIEEMR--KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYV 204
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
F +LD LCK V+ A +F+ R +F + + + GWC + A +VL +M E
Sbjct: 205 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 264
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG-VAGEVK 303
G+ P +V + LL GY ++ +A++ +M+KR E +V YT ++ +
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMD 324
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++ RVF EM R G + TY ALI CK + V ++M KG +P+ TY ++
Sbjct: 325 EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
E +E + +M++ G P + YNVVIR C GE+++ + ++ +M S
Sbjct: 385 VAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL--PRKFTFNRVLNGLALTGN 481
P +DT+ ++I+ L+ A EMV RG P+ T +LN L
Sbjct: 445 --PGVDTFVIMINGF---TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDK 499
Query: 482 QEFAKEI 488
E AK++
Sbjct: 500 LEMAKDV 506
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 106/297 (35%), Gaps = 83/297 (27%)
Query: 113 SGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKP-HRAVRVFI 171
SG+ HA +M D A+ L++ MR P + +L + K A+RVF+
Sbjct: 279 SGYAHA----GKMAD---AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFV 331
Query: 172 SMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG--------------------- 210
M +GC D+ ++ ++ CK ++ +S+ R
Sbjct: 332 EMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKE 391
Query: 211 -------------RFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
R C D + YN++ C + A+++ EM G+SP + T+
Sbjct: 392 QFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFV 451
Query: 256 TLLKGYFRCHQLREAWEFFLEM-------------------------------------- 277
++ G+ L EA F EM
Sbjct: 452 IMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCIS 511
Query: 278 -KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
K CE++V +T +H G VK++ +M+ L+P TY L++ L K
Sbjct: 512 NKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 203/412 (49%), Gaps = 15/412 (3%)
Query: 60 SDPGTLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAI 119
SD L LE + + ELV E+L R+ N A FF + Y+ S + I
Sbjct: 109 SDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMI 168
Query: 120 DIAARMRDYTTAWTLVSRMRSLRRGPT---PRAFAILAERYAAAGKPHRAVRVFISMHEH 176
I +MR + TAWTL+ MR P+ + I+ +Y A +A+ F +
Sbjct: 169 SILGKMRKFDTAWTLIDEMRKF--SPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRF 226
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM-A 235
++ F ++L LC+ K V A L + ++ D+ S+NI+ NGWC + +P A
Sbjct: 227 KLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREA 286
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
+V EM G+ +V+Y++++ Y + L + + F MKK E D Y +VH
Sbjct: 287 ERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHA 346
Query: 296 FGVAGEVKKSKRVFDEMVRA-GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
A V +++ + M G+ P+V TYN+LI+ LCK + A VF+EM+ KG P
Sbjct: 347 LAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP 406
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+ TY+ +R L +G E E + +M K G P+V+TY ++IR C + + L ++
Sbjct: 407 TIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLW 463
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
++M + + P+L +Y V+I +F+ K E+ A EM D+G P +
Sbjct: 464 DEMKEKTVG--PDLSSYIVMIHGLFLNGKIEE---AYGYYKEMKDKGMRPNE 510
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK-RKCEIDVVTYTTMVHGFGVAGEV 302
++G ++ Y++++ + + AW EM+K ++ T M+ + +V
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 213
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA-LLVFEEMVGKGCVP-NLNTYN 360
K+ F R L + + +L+ LC+ V +A L+F K P + ++N
Sbjct: 214 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIF---CNKDKYPFDAKSFN 270
Query: 361 VVIRGLCHS-GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
+V+ G C+ G A M G++ V +Y+ +I + G + K L +F++M
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 420 GSCSCL-PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD-RGFLPRKFTFNRVLNGLA 477
C+ P+ YN ++ A+ K+ + A L+ M + +G P T+N ++ L
Sbjct: 331 ---ECIEPDRKVYNAVVHAL---AKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 478 LTGNQEFAKEIL 489
E AK++
Sbjct: 385 KARKTEEAKQVF 396
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 196/411 (47%), Gaps = 7/411 (1%)
Query: 94 KALQFFKHLDRHPTYIH-SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAI 152
++L FF Y H SP + ID++ ++R + AW L+ M+S + F I
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI 191
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L RY AG AV F M ++GC D +F+ ++ L + +R A S F + + RF
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF 251
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
D + Y + GWC A +V KEM GI P + TY+ ++ RC Q+ A +
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
F +M C + +T+ ++ AG +K +V+++M + G P TYN LI+ C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
+ + ++NA+ V M+ K C N +T+N + R + D+ A +M + P+
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TYN+++R F + + L M ++M D PN++TY +L++ MF + A K
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVE--PNVNTYRLLVT-MFCGMGHWN--NAYK 486
Query: 453 LLIEMVDRGFL-PRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHALRHL 502
L EMV+ L P + VL L G + +E++ + G R L
Sbjct: 487 LFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 12/417 (2%)
Query: 69 LENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDY 128
L + + +P L++EVLK+L N G AL FK + + H+ S + I+ +++ +
Sbjct: 85 LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
W+LV M++ ++ + FA+++ RYA A K A+ F M E G + + + FN +
Sbjct: 145 KLIWSLVDDMKA-KKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRM 203
Query: 189 LDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
LD L K++ V A +F K + RF D SY I+ GW +V +EM + G
Sbjct: 204 LDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGF 263
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P +V Y ++ + + + EA FF EM++R C+ + ++++G G ++ +
Sbjct: 264 EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
F+ +G TYNAL+ C +++A +EM KG PN TY++++ L
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLP 426
M+R+ E + P+V TY +++R FC+ ++ + ++++M G G LP
Sbjct: 384 R---MQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG---VLP 437
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
+ ++ LI+A+ K ++ A + EM+D G P F+R+ L G ++
Sbjct: 438 GMHMFSSLITALCHENKLDE---ACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKD 491
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P A+ I+ + A K A+R F M + C+ + F ++++ L K++ A
Sbjct: 265 PDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 324
Query: 205 FKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
F+ + F ++ +YN + +C +R A + + EM +G+ P TY+ +L R
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+ +EA+E + M CE V TY MV F + + +++DEM G++P +
Sbjct: 385 MQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 441
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+++LI LC ++ + A F EM+ G P + ++ + + L G ++ + + +M+
Sbjct: 442 FSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Query: 384 K 384
+
Sbjct: 502 R 502
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 201/430 (46%), Gaps = 10/430 (2%)
Query: 60 SDPGTLAEALENSPFRWTP----ELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGF 115
SD + LE++ ++P LV++VLKR N G A +FF R P + HS +
Sbjct: 46 SDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESY 105
Query: 116 EHAIDIAARMRDYTTAWTLVSRMRSLRRGP-TPRAFAILAERYAAAGKPHRAVRVFISMH 174
++I + + W + R + + F I+ Y+ A P A R F M
Sbjct: 106 HILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMV 165
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTP 233
E G + ++ + +L LC K V A F +G S +Y+I+ GW I+
Sbjct: 166 EFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDAS 225
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A +V EM ER ++ YN LL + + ++ F EM + D ++ +
Sbjct: 226 GARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFI 285
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
H + AG+V + +V D M R LVP+V T+N +I+ LCK + V +A L+ +EM+ KG
Sbjct: 286 HAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P+ TYN ++ C ++ RA + + RM++ P TYN+V++ G ++ +
Sbjct: 346 PDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI 405
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
+E M + P + TY V+I + VRKK + L A + M+D G P T +
Sbjct: 406 WEGMSER--KFYPTVATYTVMIHGL-VRKKGK-LEEACRYFEMMIDEGIPPYSTTVEMLR 461
Query: 474 NGLALTGNQE 483
N L G +
Sbjct: 462 NRLVGWGQMD 471
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 138/309 (44%), Gaps = 7/309 (2%)
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFR--GRFRCDSVSYNIIANGWCLIKRTPMALQVL 239
L S++ ++++L +K+ + R F S + I+ + A +
Sbjct: 102 LESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAF 161
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
M E GI P + + LL + A EFF + K TY+ +V G+
Sbjct: 162 NRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARI 221
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
+ +++VFDEM+ V + YNAL+ LCK V +F+EM G P+ ++
Sbjct: 222 RDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSF 281
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
+ I C +GD+ A + + RM+++ + P+V T+N +I+ C +++ + ++M
Sbjct: 282 AIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQ 341
Query: 420 GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
+ P+ TYN S M ++ A KLL M LP + T+N VL L
Sbjct: 342 KGAN--PDTWTYN---SIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 480 GNQEFAKEI 488
G + A EI
Sbjct: 397 GRFDRATEI 405
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 37/277 (13%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P+ + ++IL +A A +VF M E C DL ++N +LD LCK+ V+ + +
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 205 FKTFRG-RFRCDSVSYNIIANGWC-----------------------------LIK---- 230
F+ + D+ S+ I + +C +IK
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 231 --RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+ A +L EM ++G +P TYN+++ + ++ A + M + KC D T
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 385
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC-KKDCVQNALLVFEEM 347
Y ++ G ++ +++ M P+VATY +I L KK ++ A FE M
Sbjct: 386 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
+ +G P T ++ L G M+ G+ME+
Sbjct: 446 IDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 207/442 (46%), Gaps = 78/442 (17%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV +M + P F L K AV + M + GC+ DL ++ T+
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 189 LDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMAL----------- 236
++ LCK +++A SL K +G+ D V YN I +G C K AL
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 237 ------------------------QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
++L +M ER I+P +VT++ L+ + + +L EA +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
+ EM KR + D+ TY+++++GF + + ++K +F+ M+ P+V TY+ LI+ C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 333 K------------------------------------KDCVQNALLVFEEMVGKGCVPNL 356
K +DC NA +VF++MV G PN+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC-DNAQMVFKQMVSVGVHPNI 468
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
TYN+++ GLC +G + +A+ +++ + P + TYN++I C AG++E G +F
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+ S PN+ YN +IS F RK S++ A LL +M + G LP T+N ++
Sbjct: 529 LSLKGVS--PNVIAYNTMISG-FCRKGSKE--EADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 477 ALTGNQEFAKEILRMQSRCGHA 498
G++E + E+++ CG A
Sbjct: 584 LRDGDREASAELIKEMRSCGFA 605
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 178/364 (48%), Gaps = 8/364 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + + A L + M + P ++ L G+ A R+ M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E ++ +F+ ++D K ++ A L+ R D +Y+ + NG+C+ R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A + + M + P +VTY+TL+KG+ + ++ E E F EM +R + VTYTT++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
HGF A + ++ VF +MV G+ P++ TYN L+ LCK + A++VFE +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P++ TYN++I G+C +G +E E + G+ P+V YN +I FC G E+ S+
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 414 FEKMG-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
+KM DG LPN TYN LI A R + D + +L+ EM GF T V
Sbjct: 561 LKKMKEDGP---LPNSGTYNTLIRA---RLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 473 LNGL 476
N L
Sbjct: 615 TNML 618
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 174/367 (47%), Gaps = 6/367 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M R P+ F L A K + + M G DL +++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 191 VLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ ++ +A + L K + + D V+ + + NG+C KR A+ ++ +M E G P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
T+ TL+ G F ++ EA +M +R C+ D+VTY T+V+G G++ + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+M + + V YN +I LCK + +AL +F EM KG P++ TY+ +I LC+
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G A + M + I P+V T++ +I F G++ + ++++M S P++
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIF 364
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TY+ LI+ + + ++ A + M+ + P T++ ++ G E E+
Sbjct: 365 TYSSLINGFCMHDRLDE---AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 490 RMQSRCG 496
R S+ G
Sbjct: 422 REMSQRG 428
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 2/296 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID + A L M P ++ L + + A +F M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
C ++ +++T++ CK KRVE LF+ R ++V+Y + +G+ +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A V K+M G+ P ++TYN LL G + +L +A F +++ E D+ TY M+
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G AG+V+ +F + G+ P+V YN +I C+K + A + ++M G +
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
PN TYN +IR GD E + E + M G T +V D G ++K
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 625
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 147/355 (41%), Gaps = 77/355 (21%)
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG---- 260
F + G +R I+ N I + A+ + +M + P++V +N LL
Sbjct: 43 FASASGDYR------EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM 96
Query: 261 -------------------------------YFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
+ R QL A +M K E D+VT
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
+++++G+ + + + + D+MV G P T+ LI L + A+ + ++MV
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
+GC P+L TY V+ GLC GD++ A+ + +MEK I V YN +I C ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 410 GLSMFEKMGDG-------------SCSC--------------------LPNLDTYNVLIS 436
L++F +M + SC C PN+ T++ LI
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 437 AMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
A FV++ LV A KL EM+ R P FT++ ++NG + + AK + +
Sbjct: 337 A-FVKEGK--LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 176/363 (48%), Gaps = 6/363 (1%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A L+ RM P + + R +G A+ +F M E + + ++ +
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 189 LDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
+D LCK + A SLF + + D V+Y+ + G C + ++L+EM R I
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P +VT++ L+ + + +L EA E + EM R D +TY +++ GF + ++ +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+FD MV G P + TY+ LI CK V + + +F E+ KG +PN TYN ++ G C
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
SG + A E M G+ PSV TY +++ CD GE+ K L +FEKM +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL--G 489
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
+ YN++I M K +D A L + D+G P T+N ++ GL G+ A
Sbjct: 490 IGIYNIIIHGMCNASKVDD---AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 488 ILR 490
+ R
Sbjct: 547 LFR 549
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 191/415 (46%), Gaps = 16/415 (3%)
Query: 84 VLKRLWNHGPKAL--QFFKHLDRHPTYIHSPSGFEHAIDIAARMRD--YTTAWTLVSRMR 139
VL RL G AL F+ ++ S +++I I + +D + A +L + M
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNI---KASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 140 SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
++ L GK ++ M D+ +F+ ++DV K ++
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 200 MAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
A L+ R D+++YN + +G+C A Q+ M +G P +VTY+ L+
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
Y + ++ + F E+ + + +TY T+V GF +G++ +K +F EMV G+
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
PSV TY L+ LC + AL +FE+M + YN++I G+C++ ++ A
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ G++P V TYNV+I C G + + +F KM + C+ P+ TYN+LI A
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT--PDDFTYNILIRAH 570
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQS 493
L+ + +L+ EM GF T V++ L+ ++ K L M S
Sbjct: 571 L---GGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS---DRRLDKSFLDMLS 619
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 189/454 (41%), Gaps = 48/454 (10%)
Query: 84 VLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRD------YTTAWTLVSR 137
+++RL KA F + L++ + +H S E + R+R+ A L
Sbjct: 1 MIQRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFES 60
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
M R PTP F L A + + M +G D+ + +++ C+ K+
Sbjct: 61 MIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK 120
Query: 198 VEMAHSL---------------FKTFRGRF---------------------RCDSVSYNI 221
+ A S+ F T F R D V+ +
Sbjct: 121 LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
+ NG CL R AL ++ M E G P VTY +L + A + F +M++R
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
+ VV Y+ ++ G + +F+EM G+ V TY++LI LC +
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
+ EM+G+ +P++ T++ +I G + A E M GI P TYN +I F
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
C + + MF+ M C P++ TY++LI++ K+ +D +L E+ +G
Sbjct: 361 CKENCLHEANQMFDLMVSKGCE--PDIVTYSILINSYCKAKRVDD---GMRLFREISSKG 415
Query: 462 FLPRKFTFNRVLNGLALTGNQEFAKEILR-MQSR 494
+P T+N ++ G +G AKE+ + M SR
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 188/386 (48%), Gaps = 7/386 (1%)
Query: 113 SGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFIS 172
S F I R A ++ M S P + F + + Y G A+R+
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 173 MHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR--FRCDSVSYNIIANGWCLIK 230
M E GC S N I+ CK RVE A + + + F D ++N + NG C
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 231 RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYT 290
A++++ M + G P + TYN+++ G + +++EA E +M R C + VTY
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK 350
T++ +V+++ + + G++P V T+N+LIQ LC + A+ +FEEM K
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 351 GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
GC P+ TYN++I LC G ++ A+ + +ME G SV TYN +I FC A + +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 411 LSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFN 470
+F++M S N TYN LI + ++ ED A +L+ +M+ G P K+T+N
Sbjct: 490 EEIFDEMEVHGVS--RNSVTYNTLIDGLCKSRRVED---AAQLMDQMIMEGQKPDKYTYN 544
Query: 471 RVLNGLALTGNQEFAKEILRMQSRCG 496
+L G+ + A +I++ + G
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 183/409 (44%), Gaps = 9/409 (2%)
Query: 76 WTPELVDEVLKRLWNHG--PKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWT 133
W+ V+ ++ G AL F + + + F ++ + A
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
++ M P + + G+ AV V M C + ++NT++ LC
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 194 KTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
K +VE A L + + D ++N + G CL + +A+++ +EM +G P
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TYN L+ +L EA +M+ C V+TY T++ GF A + ++++ +FDEM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
G+ + TYN LI LCK V++A + ++M+ +G P+ TYN ++ C GD+
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
++A + + M +G P + TY +I C AG +E + + + P+ YN
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYN 614
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGFL-PRKFTFNRVLNGLALTG 480
+I +F ++K+ + + L EM+++ P ++ V GL G
Sbjct: 615 PVIQGLFRKRKTTEAI---NLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 185/406 (45%), Gaps = 48/406 (11%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
AL+ F + P + P+ +E + R + ++ M+S R F IL
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 155 ERYAAAGKPHRAVRVFISM-HEHGCRQDLNSFNTILDVLC---KTKRVEMAHSLFKTFRG 210
E YA + V M E G + D + +N +L++L K VE++H+
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA------- 178
Query: 211 RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA 270
+M+ GI P + T+N L+K R HQLR A
Sbjct: 179 ------------------------------KMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 271 WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQV 330
+M D T+TT++ G+ G++ + R+ ++MV G S + N ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 331 LCKKDCVQNALLVFEEMVGK-GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
CK+ V++AL +EM + G P+ T+N ++ GLC +G ++ A+E M M + G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
V TYN VI C GE+++ + + ++M CS PN TYN LIS + + E+
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS--PNTVTYNTLISTLCKENQVEE--- 383
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSR 494
A +L + +G LP TFN ++ GL LT N A E+ M+S+
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 5/268 (1%)
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
R++ A L MRS P + +L + + GK A+ + M GC + + ++
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 186 NTILDVLCKTKRVEMAHSLFKTFR--GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
NT++D CK + A +F G R +SV+YN + +G C +R A Q++ +M
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSR-NSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
G P TYN+LL + R +++A + M CE D+VTY T++ G AG V+
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG-CVPNLNTYNVV 362
+ ++ + G+ + YN +IQ L +K A+ +F EM+ + P+ +Y +V
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 363 IRGLCHSGD-MERAVEYMGRMEKHGIRP 389
RGLC+ G + AV+++ + + G P
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVP 680
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 124/252 (49%), Gaps = 7/252 (2%)
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
SP Y +L R + + +MK +CE+ T+ ++ + +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 308 VFDEMVRA-GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
V D M+ GL P YN ++ +L + ++ + +M G P+++T+NV+I+ L
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C + + A+ + M +G+ P +T+ V++ + + G+++ L + E+M + CS
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS-WS 258
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR-GFLPRKFTFNRVLNGLALTGNQEFA 485
N+ + NV++ + ED A + EM ++ GF P ++TFN ++NGL G+ + A
Sbjct: 259 NV-SVNVIVHGFCKEGRVED---ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 486 KEILRMQSRCGH 497
EI+ + + G+
Sbjct: 315 IEIMDVMLQEGY 326
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 8/196 (4%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA 149
N +A + F ++ H +S + + ID + R A L+ +M + P
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVT-YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ L + G +A + +M +GC D+ ++ T++ LCK RVE+A L ++ +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 210 GR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS-PTMVTYNTLLKGYFRCH-- 265
+ +YN + G ++T A+ + +EM E+ + P V+Y + +G C+
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL--CNGG 660
Query: 266 -QLREAWEFFLEMKKR 280
+REA +F +E+ ++
Sbjct: 661 GPIREAVDFLVELLEK 676
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 200/403 (49%), Gaps = 41/403 (10%)
Query: 129 TTAWTLVSRMRSLRRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
+ A LV RM ++RG P + ++ G A+ + M D+ FN
Sbjct: 207 SEAVALVDRM--VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
TI+D LCK + V+ A +LFK + R + V+Y+ + + C R A Q+L +M E+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
I+P +VT+N L+ + + + EA + + +M KR + D+ TY ++V+GF + + K+
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
K++F+ MV P V TYN LI+ CK V++ +F EM +G V + TY +I+G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE---------- 415
L H GD + A + +M G+ P + TY++++ C+ G++EK L +F+
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 416 ---------------KMGDG---SCS-----CLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
K+ DG CS PN+ TYN +IS + ++ ++ A
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE---AYA 561
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
LL +M + G LP T+N ++ G++ + E++R C
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSC 604
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 170/364 (46%), Gaps = 8/364 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID + R A L M + P ++ L + G+ A ++ M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E +L +FN ++D K + A L+ R D +YN + NG+C+ R
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A Q+ + M + P +VTYNTL+KG+ + ++ + E F EM R D VTYTT++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G G+ +++VF +MV G+ P + TY+ L+ LC ++ AL VF+ M
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
++ Y +I G+C +G ++ + + G++P+V TYN +I C +++ ++
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 414 FEKMG-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
+KM DG LPN TYN LI A + D + +L+ EM F+ T V
Sbjct: 563 LKKMKEDGP---LPNSGTYNTLIRAHL---RDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 473 LNGL 476
N L
Sbjct: 617 ANML 620
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 173/382 (45%), Gaps = 6/382 (1%)
Query: 109 IHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
+H + I+ R + A L+ +M L P+ + L Y + AV
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWC 227
+ M E G R D +F T++ L + A +L R + + V+Y ++ NG C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
T +AL +L +M I +V +NT++ + + +A F EM+ + +VV
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
TY++++ G + ++ +M+ + P++ T+NALI K+ A ++++M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
+ + P++ TYN ++ G C +++A + M P V TYN +I+ FC + +
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
E G +F +M + + TY LI +F D A K+ +MV G P
Sbjct: 417 EDGTELFREMSHRGL--VGDTVTYTTLIQGLF---HDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 468 TFNRVLNGLALTGNQEFAKEIL 489
T++ +L+GL G E A E+
Sbjct: 472 TYSILLDGLCNNGKLEKALEVF 493
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 166/362 (45%), Gaps = 45/362 (12%)
Query: 169 VFISMHEHGCRQD----LNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIA 223
V IS+ E R + L ++N +++ C+ ++ +A +L K + + V+ + +
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
NG+C KR A+ ++ +M E G P +T+ TL+ G F ++ EA M +R C+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
++VTY +V+G G+ + + ++M A + V +N +I LCK V +AL +
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMG----------------------- 380
F+EM KG PN+ TY+ +I LC G A + +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 381 ------------RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
M K I P + TYN ++ FC ++K MFE M S C P++
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM--VSKDCFPDV 400
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
TYN LI K+ ED +L EM RG + T+ ++ GL G+ + A+++
Sbjct: 401 VTYNTLIKGFCKSKRVED---GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 489 LR 490
+
Sbjct: 458 FK 459
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 36/307 (11%)
Query: 217 VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLE 276
V +N + + +K+ + + + ++M I + TYN L+ + R Q+ A +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
M K E +VT +++++G+ + + + D+MV G P T+ LI L +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
A+ + + MV +GC PNL TY VV+ GLC GD + A+ + +ME I V +N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDG-------------SCSCL------------------ 425
+I C ++ L++F++M SC C
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 426 --PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
PNL T+N LI A FV++ V A KL +M+ R P FT+N ++NG + +
Sbjct: 326 INPNLVTFNALIDA-FVKEGK--FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 484 FAKEILR 490
AK++
Sbjct: 383 KAKQMFE 389
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 5/182 (2%)
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+F MV++ +PS+ +N L+ + K + + E+M V L TYN++I C
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+ A+ +G+M K G PS+ T + ++ +C I +++ ++M + P+
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR--PD 189
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
T+ LI +F+ K+ + V L+ MV RG P T+ V+NGL G+ + A
Sbjct: 190 TITFTTLIHGLFLHNKASEAVA---LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 488 IL 489
+L
Sbjct: 247 LL 248
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 191/373 (51%), Gaps = 9/373 (2%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV RM P + + G+P A+ + M + D+ +NTI
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 189 LDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
+D LCK K ++ A LF + + D +YN + + C R A ++L +M E+ I
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK-CEIDVVTYTTMVHGFGVAGEVKKSK 306
+P +V +N L+ + + +L EA + + EM K K C DVV Y T++ GF V++
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCK-KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
VF EM + GLV + TY LI + +DC NA +VF++MV G P++ TYN+++ G
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDC-DNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
LC++G++E A+ M+K ++ + TY +I C AG++E G +F +
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK-- 493
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
PN+ TY ++S F RK ++ A L +EM + G LP T+N ++ G++ +
Sbjct: 494 PNVVTYTTMMSG-FCRKGLKE--EADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 486 KEILRMQSRCGHA 498
E+++ CG A
Sbjct: 551 AELIKEMRSCGFA 563
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 3/284 (1%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM-HEHGCRQDLNSFN 186
++ A L+S M P F L + + GK A +++ M C D+ ++N
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
T++ CK KRVE +F+ R ++V+Y + +G+ + A V K+M
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
G+ P ++TYN LL G + A F M+KR ++D+VTYTTM+ AG+V+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
+F + G+ P+V TY ++ C+K + A +F EM G +PN TYN +IR
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
GD + E + M G T+ +V D G ++K
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GRLDK 583
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 18/316 (5%)
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKE 241
+N F+ ++ + + + + ++H+L+ +Y+I N +C + +AL +L +
Sbjct: 88 MNKFDLVISLGEQMQNLGISHNLY------------TYSIFINYFCRRSQLSLALAILGK 135
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M + G P++VT N+LL G+ +++ EA +M + + D VT+TT+VHG +
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
++ + + MV G P + TY A+I LCK+ AL + +M ++ YN
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I GLC M+ A + +ME GI+P V TYN +I C+ G + M + +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV-DRGFLPRKFTFNRVLNGLALTG 480
+ P+L +N LI A FV++ LV A KL EMV + P +N ++ G
Sbjct: 316 IN--PDLVFFNALIDA-FVKEGK--LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 481 NQEFAKEILRMQSRCG 496
E E+ R S+ G
Sbjct: 371 RVEEGMEVFREMSQRG 386
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 12/314 (3%)
Query: 168 RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGW 226
R F CR++L S + D+ +++ A LF + R V ++ + +
Sbjct: 32 RSFAGASSDDCRENL-SRKVLQDL-----KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAI 85
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
+ + + + + ++M GIS + TY+ + + R QL A +M K +
Sbjct: 86 AKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSI 145
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
VT ++++GF + ++ + D+MV G P T+ L+ L + + A+ + E
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
MV KGC P+L TY VI GLC G+ + A+ + +MEK I V YN +I C
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
++ +F KM P++ TYN LIS + + D A +LL +M+++ P
Sbjct: 266 MDDAFDLFNKMETKGIK--PDVFTYNPLISCLCNYGRWSD---ASRLLSDMLEKNINPDL 320
Query: 467 FTFNRVLNGLALTG 480
FN +++ G
Sbjct: 321 VFFNALIDAFVKEG 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 105 HPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPH 164
+ T IH GF A RD A + +M S P + IL + G
Sbjct: 394 YTTLIH---GFFQA-------RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 165 RAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIA 223
A+ VF M + + D+ ++ T+++ LCK +VE LF + + + + V+Y +
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
+G+C A + EM E G P TYNTL++ R + E EM+
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Query: 284 IDVVTY---TTMVH 294
D T+ T M+H
Sbjct: 564 GDASTFGLVTNMLH 577
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 174/343 (50%), Gaps = 11/343 (3%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + ++ Y AG+ + A+ V M D+ ++NTIL LC + +++ A +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 205 FKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
R C D ++Y I+ C A+++L EM +RG +P +VTYN L+ G
Sbjct: 227 LDRMLQR-DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ +L EA +F +M C+ +V+T+ ++ G ++++ +M+R G PSV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM 382
T+N LI LC+K + A+ + E+M GC PN +YN ++ G C M+RA+EY+ RM
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRK 442
G P + TYN ++ C G++E + + ++ CS P L TYN +I +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS--PVLITYNTVIDGLAKAG 463
Query: 443 KSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
K+ + KLL EM + P T++ ++ GL+ G + A
Sbjct: 464 KTGKAI---KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 15/396 (3%)
Query: 77 TPELV--DEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTT--AW 132
+P++V + +L+ L + G K Q + LDR P + I I A RD A
Sbjct: 201 SPDVVTYNTILRSLCDSG-KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 133 TLVSRMRSLRRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
L+ MR RG TP + +L G+ A++ M GC+ ++ + N IL
Sbjct: 260 KLLDEMRD--RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 191 VLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+C T R A L R F V++NI+ N C A+ +L++M + G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++YN LL G+ + ++ A E+ M R C D+VTY TM+ G+V+ + +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+++ G P + TYN +I L K A+ + +EM K P+ TY+ ++ GL
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G ++ A+++ E+ GIRP+ T+N ++ C + + ++ + M + C PN
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK--PNET 555
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
+Y +LI + +++ A +LL E+ ++G + +
Sbjct: 556 SYTILIEGLAYEGMAKE---ALELLNELCNKGLMKK 588
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 179/363 (49%), Gaps = 12/363 (3%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A ++ RM P + IL E A+++ M + GC D+ ++N +++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 191 VLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+CK R++ A + + +++NII C R A ++L +M +G SP
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++VT+N L+ R L A + +M + C+ + ++Y ++HGF ++ ++
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+ MV G P + TYN ++ LCK V++A+ + ++ KGC P L TYN VI GL +
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF---EKMGDGSCSCLP 426
G +A++ + M ++P TY+ ++ G++++ + F E+MG P
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-----IRP 517
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
N T+N ++ + ++++ + L+ M++RG P + ++ ++ GLA G + A
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAI---DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 487 EIL 489
E+L
Sbjct: 575 ELL 577
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 188/433 (43%), Gaps = 47/433 (10%)
Query: 99 FKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYA 158
+K ++ + I + +R R+ + S++ S + F L+ Y+
Sbjct: 24 YKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLSSGYS 83
Query: 159 AA-GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT--FRGRFRCD 215
+ G H + S++ +D+ S N L + +T +E + + G D
Sbjct: 84 NSNGNGH-----YSSVNSSFALEDVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVP-D 136
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ--------- 266
+ + G+C + +T A ++L+ + G P ++TYN ++ GY + +
Sbjct: 137 IIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD 196
Query: 267 -----------------------LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
L++A E M +R C DV+TYT ++ V
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
+ ++ DEM G P V TYN L+ +CK+ + A+ +M GC PN+ T+N+++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
R +C +G A + + M + G PSV T+N++I + C G + + + + EKM C
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
PN +YN L+ F ++K D + + L MV RG P T+N +L L G E
Sbjct: 377 --PNSLSYNPLLHG-FCKEKKMDRAI--EYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 484 FAKEILRMQSRCG 496
A EIL S G
Sbjct: 432 DAVEILNQLSSKG 444
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 186/398 (46%), Gaps = 41/398 (10%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV +M + P F L K AV + M GC+ DL ++ T+
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 189 LDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ LCK +++A SL K +G+ D V Y I + C K AL + EM +GI
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 248 SPTMVTYNTLLK-----------------------------------GYFRCHQLREAWE 272
P +VTYN+L++ + + +L EA +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
+ EM KR + D+ TY+++++GF + + ++K +F+ M+ P+V TYN LI+ C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
K V+ + +F EM +G V N TYN +I+GL +GD + A + +M G+ P +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TY++++ C G++EK L +FE + P++ TYN++I M K ED
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKME--PDIYTYNIMIEGMCKAGKVED---GWD 521
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
L + +G P + +++G G +E A + R
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 179/360 (49%), Gaps = 8/360 (2%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID ++ A L + M + P + L G+ A R+ M E
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQ 237
++ +F+ ++D K ++ A L+ R D +Y+ + NG+C+ R A
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+ + M + P +VTYNTL+KG+ + ++ E E F EM +R + VTY T++ G
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
AG+ ++++F +MV G+ P + TY+ L+ LCK ++ AL+VFE + P++
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
TYN++I G+C +G +E + + G++P+V Y +I FC G E+ ++F +M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 418 G-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
DG+ LPN TYN LI A R + D + +L+ EM GF+ T + V+N L
Sbjct: 562 KEDGT---LPNSGTYNTLIRA---RLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 6/377 (1%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F + A+M + +L RM++LR ++ IL + + A+ V M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTP 233
+ G D+ + +++L+ C KR+ A +L + F ++ ++V++N + +G L +
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A+ ++ M RG P + TY T++ G + + A +M+K K E DVV YTT++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
V + +F EM G+ P+V TYN+LI+ LC +A + +M+ +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
PN+ T++ +I G + A + M K I P + TY+ +I FC +++ M
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
FE M S C PN+ TYN LI K+ E+ +L EM RG + T+N ++
Sbjct: 383 FELM--ISKDCFPNVVTYNTLIKGFCKAKRVEE---GMELFREMSQRGLVGNTVTYNTLI 437
Query: 474 NGLALTGNQEFAKEILR 490
GL G+ + A++I +
Sbjct: 438 QGLFQAGDCDMAQKIFK 454
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 6/331 (1%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYN 220
K AV +F M + + FN +L + K + ++ SL + + R D SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
I+ N +C + P+AL VL +M + G P +VT ++LL GY ++ EA +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
+ + + VT+ T++HG + + ++ + D MV G P + TY ++ LCK+ + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
L + ++M ++ Y +I LC+ ++ A+ M+ GIRP+V TYN +IR
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
C+ G + M + + PN+ T++ LI A FV++ LV A KL EM+ R
Sbjct: 300 LCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDA-FVKEGK--LVEAEKLYDEMIKR 354
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
P FT++ ++NG + + AK + +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 2/296 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID + A L M P ++ L + + A +F M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
C ++ ++NT++ CK KRVE LF+ R ++V+YN + G
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
MA ++ K+M G+ P ++TY+ LL G + +L +A F ++K K E D+ TY M+
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G AG+V+ +F + G+ P+V Y +I C+K + A +F EM G +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
PN TYN +IR GD + E + M G T ++VI D G +EK
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD-GRLEK 622
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 6/371 (1%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A L+ RM P + + + +G+ A+ + M E + D ++ I
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 189 LDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
+D LCK ++ A +LF + F+ D + Y + G+C R ++L++M +R I
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+P +V ++ L+ + + +LREA E EM +R D VTYT+++ GF ++ K+
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ D MV G P++ T+N LI CK + + + L +F +M +G V + TYN +I+G C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
G +E A E M +RP + +Y +++ CD GE EK L +FEK+ +
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL--D 491
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
+ YN++I M K +D A L + +G P T+N ++ GL G+ A
Sbjct: 492 IGIYNIIIHGMCNASKVDD---AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 488 ILRMQSRCGHA 498
+ R GH+
Sbjct: 549 LFRKMEEDGHS 559
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 146/280 (52%), Gaps = 3/280 (1%)
Query: 141 LRRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
++R TP AF+ L + + GK A + M + G D ++ +++D CK ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 199 EMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
+ A+ + + ++ ++NI+ NG+C L++ ++M+ RG+ VTYNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
++G+ +L A E F EM R+ D+V+Y ++ G GE +K+ +F+++ ++ +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
+ YN +I +C V +A +F + KG P++ TYN++I GLC G + A
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 378 YMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+ME+ G P+ TYN++IR G+ K + E++
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 180/433 (41%), Gaps = 48/433 (11%)
Query: 95 ALQFFKHLDR---HPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFA 151
A+ F+ + R P I F + AR + Y L +M +
Sbjct: 56 AVDLFQEMTRSRPRPRLID----FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 152 ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRG 210
I+ K A + + G D +F+T+++ LC RV A L +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 211 RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA 270
+ ++ N + NG CL + A+ ++ M E G P VTY +LK + Q A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 271 WEFFLEMKKRKCEI-----------------------------------DVVTYTTMVHG 295
E +M++RK ++ D++ YTT++ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
F AG ++ +M++ + P V ++ALI K+ ++ A + +EM+ +G P+
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
TY +I G C +++A + M G P+++T+N++I +C A I+ GL +F
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
KM + + TYN LI K E VA +L EMV R P ++ +L+G
Sbjct: 412 KM--SLRGVVADTVTYNTLIQGFCELGKLE---VAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 476 LALTGNQEFAKEI 488
L G E A EI
Sbjct: 467 LCDNGEPEKALEI 479
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 11/320 (3%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
W+ G K L+ P + F ID + A L M ++RG +P
Sbjct: 298 WDDGAKLLRDMIKRKITPDVV----AFSALIDCFVKEGKLREAEELHKEM--IQRGISPD 351
Query: 149 A--FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK 206
+ L + + + +A + M GC ++ +FN +++ CK ++ LF+
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 207 --TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ RG D+V+YN + G+C + + +A ++ +EM R + P +V+Y LL G
Sbjct: 412 KMSLRGVV-ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+ +A E F +++K K E+D+ Y ++HG A +V + +F + G+ P V TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
N +I LCKK + A L+F +M G PN TYN++IR GD ++ + + +++
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 385 HGIRPSVQTYNVVIRYFCDA 404
G T +V+ D
Sbjct: 591 CGFSVDASTVKMVVDMLSDG 610
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 41/193 (21%)
Query: 338 QNALLVFEEMVG-----------------------------------KGCVPNLNTYNVV 362
+A+ +F+EM KG NL T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSC 422
I C + A MG++ K G P T++ +I C G + + L + ++M +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 423 SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
P L T N L++ + + K D V+ L+ MV+ GF P + T+ VL + +G
Sbjct: 174 K--PTLITLNALVNGLCLNGKVSDAVL---LIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 483 EFAKEILR-MQSR 494
A E+LR M+ R
Sbjct: 229 ALAMELLRKMEER 241
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 181/347 (52%), Gaps = 17/347 (4%)
Query: 147 PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK 206
P A+L E +A V+ M + ++ +FN +++ LCKT ++ A + +
Sbjct: 193 PLMIALLKENRSA-----DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 207 TFRGRFRC--DSVSYNIIANGWCLIK---RTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+ + C + VSYN + +G+C + + A VLKEM E +SP + T+N L+ G+
Sbjct: 248 DMK-VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
++ L + + F EM + + +V++Y ++++G G++ ++ + D+MV AG+ P++
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
TYNALI CK D ++ AL +F + G+G VP YN++I C G ++
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
ME+ GI P V TYN +I C G IE +F+++ + LP+L T+++L+ +
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL---TSKGLPDLVTFHILMEGYCRK 483
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+S A LL EM G PR T+N V+ G GN + A +
Sbjct: 484 GESRK---AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 179/362 (49%), Gaps = 9/362 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERY---AAAGKPHRAVRVFI 171
F I+ + A ++ M+ P ++ L + Y GK ++A V
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 172 SMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIK 230
M E+ +L +FN ++D K + + +FK + + + +SYN + NG C
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 231 RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYT 290
+ A+ + +M G+ P ++TYN L+ G+ + L+EA + F +K + Y
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK 350
++ + G++ + +EM R G+VP V TYN LI LC+ ++ A +F+++ K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 351 GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
G +P+L T+++++ G C G+ +A + M K G++P TYN+V++ +C G ++
Sbjct: 466 G-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 411 LSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFN 470
+M +M + N+ +YNVL+ + K ED A LL EM+++G +P + T+
Sbjct: 525 TNMRTQM-EKERRLRMNVASYNVLLQGYSQKGKLED---ANMLLNEMLEKGLVPNRITYE 580
Query: 471 RV 472
V
Sbjct: 581 IV 582
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 167/318 (52%), Gaps = 9/318 (2%)
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ +L + + ++ + + R + + + ++N++ N C + A V+++M G
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 248 SPTMVTYNTLLKGYFRCH---QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
SP +V+YNTL+ GY + ++ +A EM + ++ T+ ++ GF +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
S +VF EM+ + P+V +YN+LI LC + A+ + ++MV G PNL TYN +I
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
G C + ++ A++ G ++ G P+ + YN++I +C G+I+ G ++ E+M
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI-- 432
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
+P++ TYN LI+ + ++ ++ A KL ++ +G LP TF+ ++ G G
Sbjct: 433 VPDVGTYNCLIAGLC---RNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRK 488
Query: 485 AKEILRMQSRCGHALRHL 502
A +L+ S+ G RHL
Sbjct: 489 AAMLLKEMSKMGLKPRHL 506
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 158/364 (43%), Gaps = 53/364 (14%)
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYN-IIANGWCL 228
F +H + + + LD + HS+F CD+V N IIA+ L
Sbjct: 105 FKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS---MCDNVCVNSIIADMLVL 161
Query: 229 I----KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
R + + K G + ++ L+ + ++ + + EM +RK +
Sbjct: 162 AYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQP 221
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK----------- 333
+V T+ +++ G++ K++ V ++M G P+V +YN LI CK
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 334 ---KDCVQN------------------------ALLVFEEMVGKGCVPNLNTYNVVIRGL 366
K+ V+N ++ VF+EM+ + PN+ +YN +I GL
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCL 425
C+ G + A+ +M G++P++ TYN +I FC +++ L MF + G G+ +
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA---V 398
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
P YN+LI A K +D L EM G +P T+N ++ GL GN E A
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDD---GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 486 KEIL 489
K++
Sbjct: 456 KKLF 459
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
PT R + +L + Y GK + M G D+ ++N ++ LC+ +E A L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
F + D V+++I+ G+C + A +LKEM++ G+ P +TYN ++KGY +
Sbjct: 459 FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 265 HQLREAWEFFLEM-KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
L+ A +M K+R+ ++V +Y ++ G+ G+++ + + +EM+ GLVP+ T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
Y +V EEMV +G VP++
Sbjct: 579 YE----------------IVKEEMVDQGFVPDI 595
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P ++ L GK A+ + M G + +L ++N +++ CK ++ A +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 205 FKTFRGRFRCDSVS-YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
F + +G+ + YN++ + +C + + + +EM GI P + TYN L+ G R
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+ A + F ++ + D+VT+ ++ G+ GE +K+ + EM + GL P T
Sbjct: 449 NGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVP-NLNTYNVVIRGLCHSGDMERAVEYMGRM 382
YN +++ CK+ ++ A + +M + + N+ +YNV+++G G +E A + M
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Query: 383 EKHGIRPSVQTYNVVIRYFCDAG 405
+ G+ P+ TY +V D G
Sbjct: 568 LEKGLVPNRITYEIVKEEMVDQG 590
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 196/404 (48%), Gaps = 37/404 (9%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A L+ RM + P + ++ G A + M + + +NTI
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 189 LDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
+D LCK K ++ A +LFK + R + V+Y+ + + C R A ++L +M ER I
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+P + T++ L+ + + +L EA + + EM KR + +VTY+++++GF + + ++K+
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+F+ MV P V TYN LI+ CK V+ + VF EM +G V N TYN++I+GL
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK----------- 416
+GD + A E M G+ P++ TYN ++ C G++EK + +FE
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 417 ----MGDGSC------------------SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 454
M +G C P++ YN +IS F RK S++ A L
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG-FCRKGSKE--EADALF 559
Query: 455 IEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
EM + G LP +N ++ G++E + E+++ CG A
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 8/364 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + + A L M + P ++ L G+ A R+ M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDS-VSYNIIANGWCLIKRTP 233
E D+ +F+ ++D K ++ A L+ R S V+Y+ + NG+C+ R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A Q+ + M + P +VTYNTL+KG+ + ++ E E F EM +R + VTY ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G AG+ ++ +F EMV G+ P++ TYN L+ LCK ++ A++VFE +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P + TYN++I G+C +G +E + + G++P V YN +I FC G E+ ++
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 414 FEKMG-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
F++M DG+ LPN YN LI A R + D + +L+ EM GF T V
Sbjct: 559 FKEMKEDGT---LPNSGCYNTLIRA---RLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Query: 473 LNGL 476
N L
Sbjct: 613 TNML 616
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 188/378 (49%), Gaps = 15/378 (3%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV +M P F L K A+ + M GC+ DL ++ +
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 189 LDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ LCK ++A +L K +G+ + YN I +G C K AL + KEM +GI
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P +VTY++L+ + +A +M +RK DV T++ ++ F G++ ++++
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
++DEMV+ + PS+ TY++LI C D + A +FE MV K C P++ TYN +I+G C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLP 426
+E +E M + G+ + TYN++I+ AG+ + +F++M DG P
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG---VPP 464
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL-PRKFTFNRVLNGLALTGNQEFA 485
N+ TYN L+ + K E +V + E + R + P +T+N ++ G+ G E
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMV----VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 486 KEILRMQSRCGHALRHLK 503
++ C +L+ +K
Sbjct: 521 WDLF-----CNLSLKGVK 533
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 179/396 (45%), Gaps = 41/396 (10%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M R P+ F+ L A K + + M G + +++ +++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 191 VLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ ++ +A ++ K + + + V+ + + NG+C KR A+ ++ +M G P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
VT+NTL+ G F ++ EA M + C+ D+VTY +V+G G+ + +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
++M + L P V YN +I LCK + +AL +F+EM KG PN+ TY+ +I LC+
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 370 G---DMERAVEYM--------------------------------GRMEKHGIRPSVQTY 394
G D R + M M K I PS+ TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 395 NVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 454
+ +I FC +++ MFE M S C P++ TYN LI K+ E+ ++
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFM--VSKHCFPDVVTYNTLIKGFCKYKRVEE---GMEVF 419
Query: 455 IEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
EM RG + T+N ++ GL G+ + A+EI +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 2/296 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID + A L M P+ ++ L + + A ++F M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
C D+ ++NT++ CK KRVE +F+ R ++V+YNI+ G
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
MA ++ KEM G+ P ++TYNTLL G + +L +A F +++ K E + TY M+
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G AG+V+ +F + G+ P V YN +I C+K + A +F+EM G +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
PN YN +IR GD E + E + M G T +V D G ++K
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 623
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 173/346 (50%), Gaps = 7/346 (2%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
PT + L + ++ G+ A + M G + D+ ++N IL +C R
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE 317
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
K DSVSYNI+ G MA EM ++G+ PT TYNTL+ G F
Sbjct: 318 MKEIG--LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+++ A E++++ +D VTY +++G+ G+ KK+ + DEM+ G+ P+ TY
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
+LI VLC+K+ + A +FE++VGKG P+L N ++ G C G+M+RA + M+
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKS 444
I P TYN ++R C G+ E+ + +M P+ +YN LIS K
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK--PDHISYNTLISGY---SKK 550
Query: 445 EDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
D A + EM+ GF P T+N +L GL+ E A+E+LR
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLR 596
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 11/335 (3%)
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCL 228
+ M+ + ++ +FN +++VLCK +++ A + V+YN + G+ L
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
R A ++ EM +G P M TYN +L + C++ R A E EMK+ D V+
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILS--WMCNEGR-ASEVLREMKEIGLVPDSVS 329
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y ++ G G+++ + DEMV+ G+VP+ TYN LI L ++ ++ A ++ E+
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
KG V + TYN++I G C GD ++A M GI+P+ TY +I C +
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 409 KGLSMFEKM-GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
+ +FEK+ G G P+L N L+ + A LL EM P
Sbjct: 450 EADELFEKVVGKG---MKPDLVMMNTLMDGHCAIGNMDR---AFSLLKEMDMMSINPDDV 503
Query: 468 TFNRVLNGLALTGNQEFAKEILRMQSRCGHALRHL 502
T+N ++ GL G E A+E++ R G H+
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 209/516 (40%), Gaps = 92/516 (17%)
Query: 55 KLVLESDPGTLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSG 114
+++LES + +E+ + TP LV L L A F H+D + +
Sbjct: 48 EILLESIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQC- 106
Query: 115 FEHAIDIAARMRDYTTAWTLV-----SRMRSLR-------------RGPTPRAFAILAER 156
AI + +++ L+ SR S+R + F +L
Sbjct: 107 --LAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRC 164
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCD 215
A+ F M E G + N IL +L + R+E A + +R + +
Sbjct: 165 CCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSN 224
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY-------------- 261
++NI+ N C + A L M GI PT+VTYNTL++G+
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284
Query: 262 -------------------FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
+ C++ R A E EMK+ D V+Y ++ G G++
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGR-ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
+ + DEMV+ G+VP+ TYN LI L ++ ++ A ++ E+ KG V + TYN++
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK------ 416
I G C GD ++A M GI+P+ TY +I C + + +FEK
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 417 ---------MGDGSC---------SCLPNLD---------TYNVLISAMFVRKKSEDLVV 449
+ DG C S L +D TYN L+ + K E+
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE--- 520
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
A +L+ EM RG P ++N +++G + G+ + A
Sbjct: 521 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+ IL Y G +A + M G + ++ +++ VLC+ + A LF+
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 209 RGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
G+ + D V N + +G C I A +LKEM I+P VTYN L++G +
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
EA E EMK+R + D ++Y T++ G+ G+ K + V DEM+ G P++ TYNAL
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
++ L K + A + EM +G VPN +++ VI + +
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 36/304 (11%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A ++ M+ + P ++ IL + G A M + G ++NT++
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
L ++E A L + R + DSV+YNI+ NG+C A + EM GI P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFF----------------------------------- 274
T TY +L+ R ++ REA E F
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
EM D VTY ++ G G+ ++++ + EM R G+ P +YN LI KK
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
++A +V +EM+ G P L TYN +++GL + + E A E + M+ GI P+ ++
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Query: 395 NVVI 398
VI
Sbjct: 611 CSVI 614
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 198/403 (49%), Gaps = 41/403 (10%)
Query: 129 TTAWTLVSRMRSLRRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
+ A LV RM ++RG P + ++ G A + M D+ FN
Sbjct: 132 SEAVALVDRM--VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
TI+D LCK + V+ A +LFK + R + V+Y+ + + C R A Q+L +M E+
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
I+P +VT+N L+ + + + EA + +M KR + D+ TY ++++GF + + K+
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
K++F+ MV P + TYN LI+ CK V++ +F EM +G V + TY +I+G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE---------- 415
L H GD + A + +M G+ P + TY++++ C+ G++EK L +F+
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 416 ---------------KMGDG---SCS-----CLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
K+ DG CS PN+ TYN +IS + ++ ++ A
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE---AYA 486
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
LL +M + G LP T+N ++ G++ + E++R C
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 168/364 (46%), Gaps = 8/364 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID + R A L M + P ++ L + G+ A ++ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E +L +FN ++D K + A L R D +YN + NG+C+ R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A Q+ + M + P + TYNTL+KG+ + ++ + E F EM R D VTYTT++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G G+ +++VF +MV G+ P + TY+ L+ LC ++ AL VF+ M
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
++ Y +I G+C +G ++ + + G++P+V TYN +I C +++ ++
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 414 FEKMG-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
+KM DG LP+ TYN LI A + D + +L+ EM F+ T V
Sbjct: 488 LKKMKEDGP---LPDSGTYNTLIRAHL---RDGDKAASAELIREMRSCRFVGDASTIGLV 541
Query: 473 LNGL 476
N L
Sbjct: 542 ANML 545
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 178/382 (46%), Gaps = 8/382 (2%)
Query: 112 PSGFE--HAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
PS FE + A+M+ + +L +M+ L + IL + + A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCL 228
M + G + + +++L+ C KR+ A +L + +R D++++ + +G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+ A+ ++ M +RG P +VTY ++ G + + A+ +M+ K E DVV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
+ T++ V + +F EM G+ P+V TY++LI LC +A + +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
K PNL T+N +I G A + M K I P + TYN +I FC ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 409 KGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
K MFE M S C P+LDTYN LI K+ ED +L EM RG + T
Sbjct: 308 KAKQMFEFM--VSKDCFPDLDTYNTLIKGFCKSKRVED---GTELFREMSHRGLVGDTVT 362
Query: 469 FNRVLNGLALTGNQEFAKEILR 490
+ ++ GL G+ + A+++ +
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFK 384
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 5/179 (2%)
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
MV++ +PS+ +N L+ + K + + E+M G NL TYN++I C
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
+ A+ +G+M K G PS+ T + ++ +C I +++ ++M + P+ T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR--PDTITF 118
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
LI +F+ K+ + V L+ MV RG P T+ V+NGL G+ + A +L
Sbjct: 119 TTLIHGLFLHNKASEAVA---LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 172/345 (49%), Gaps = 8/345 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + R A L + M + P ++ L G+ A R+ M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E ++ +FN+++D K ++ A LF R + V+YN + NG+C+ R
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A Q+ M + P +VTYNTL+ G+ + ++ + E F +M +R + VTYTT++
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
HGF A + ++ VF +MV G+ P++ TYN L+ LCK ++ A++VFE +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P++ TYN++ G+C +G +E + + G++P V YN +I FC G E+ ++
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 414 FEKMG-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEM 457
F KM DG LP+ TYN LI A + D + +L+ EM
Sbjct: 543 FIKMKEDGP---LPDSGTYNTLIRAHL---RDGDKAASAELIKEM 581
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 177/393 (45%), Gaps = 41/393 (10%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV +M + P F L K AV + M GC+ DL ++ +
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 189 LDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ LCK ++A +L K +G+ D V Y+ + + C + AL + EM +GI
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P + TY++L+ + +A +M +RK +VVT+ +++ F G++ ++++
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+FDEM++ + P++ TYN+LI C D + A +F MV K C+P++ TYN +I G C
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 368 -----------------------------------HSGDMERAVEYMGRMEKHGIRPSVQ 392
+ D + A +M G+ P++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TYN ++ C G++EK + +FE + P++ TYN++ M K ED
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKME--PDIYTYNIMSEGMCKAGKVED---GWD 506
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
L + +G P +N +++G G +E A
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 6/367 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M R P+ F+ L A K + M G +L ++N +++
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 191 VLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LC+ ++ A ++ K + + V+ N + NG+C R A+ ++ +M E G P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
VT+ TL+ G F+ ++ EA M + C+ D+VTY +++G GE + +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
++M + + V Y+ +I LCK V +AL +F EM KG P++ TY+ +I LC+
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G A + M + I P+V T+N +I F G++ + +F++M S PN+
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PNIV 346
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TYN LI+ + + ++ A ++ MV + LP T+N ++NG E+
Sbjct: 347 TYNSLINGFCMHDRLDE---AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 490 RMQSRCG 496
R SR G
Sbjct: 404 RDMSRRG 410
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 8/378 (2%)
Query: 110 HSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
H+ + I+ R + A ++ +M L GP+ L + + AV +
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK--TFRGRFRCDSVSYNIIANGWC 227
M E G + D +F T++ L + + A +L + +G + D V+Y + NG C
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLC 216
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
+AL +L +M + I +V Y+T++ + + +A F EM + DV
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
TY++++ G + R+ +M+ + P+V T+N+LI K+ + A +F+EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
+ + PN+ TYN +I G C ++ A + M P V TYN +I FC A ++
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
G+ +F M + N TY LI F ++ D A + +MV G P
Sbjct: 397 VDGMELFRDMSRRGL--VGNTVTYTTLIHGFF---QASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 468 TFNRVLNGLALTGNQEFA 485
T+N +L+GL G E A
Sbjct: 452 TYNTLLDGLCKNGKLEKA 469
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 194/397 (48%), Gaps = 8/397 (2%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARM-RDYTTAWTLVSRMRSLRRGPTPRAFAI 152
KAL HL + ++ + +D R R+ + A + M + P + I
Sbjct: 152 KALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR- 211
L + AG A+ +F M GC ++ ++NT++D CK ++++ L ++ +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
+ +SYN++ NG C R VL EM RG S VTYNTL+KGY + +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
EM + V+TYT+++H AG + ++ D+M GL P+ TY L+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
+K + A V EM G P++ TYN +I G C +G ME A+ + M++ G+ P V
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
+Y+ V+ FC + ++++ L + +M + P+ TY+ LI ++++++ A
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIK--PDTITYSSLIQGFCEQRRTKE---AC 505
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
L EM+ G P +FT+ ++N + G+ E A ++
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 201/420 (47%), Gaps = 24/420 (5%)
Query: 76 WTPELVDEVLKRLWNHGPKALQFFKHLDRHPTY--------IHSPSGFEH-------AID 120
+TPE +L + N L+F + H + +H + F+ A D
Sbjct: 46 FTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAED 105
Query: 121 IAARMRDYTTAWTLVSRMRSLRR--GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
+AA+ D A + ++ T F ++ + Y+ +A+ + HG
Sbjct: 106 VAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 179 RQDLNSFNTILDVLCKTKR-VEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLIKRTPMAL 236
+ S+N +LD ++KR + A ++FK + + +YNI+ G+C +AL
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
+ +M +G P +VTYNTL+ GY + ++ + ++ M + E ++++Y +++G
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
G +K+ V EM R G TYN LI+ CK+ AL++ EM+ G P++
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
TY +I +C +G+M RA+E++ +M G+ P+ +TY ++ F G + + + +
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
M D S P++ TYN LI+ V K ED + +L +M ++G P +++ VL+G
Sbjct: 406 MNDNGFS--PSVVTYNALINGHCVTGKMEDAIA---VLEDMKEKGLSPDVVSYSTVLSGF 460
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 181/389 (46%), Gaps = 29/389 (7%)
Query: 134 LVSRMRSLRRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
LV LR G TP + L AG +RA+ M G + ++ T++D
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 192 LCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
+ + A+ + + F V+YN + NG C+ + A+ VL++M E+G+SP
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
+V+Y+T+L G+ R + + EA EM ++ + D +TY++++ GF K++ +++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
EM+R GL P TY ALI C + ++ AL + EMV KG +P++ TY+V+I GL
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNV---------------VIRYFCDAGEIEKGLSMFE 415
A + ++ PS TY+ +I+ FC G + + +FE
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
M + P+ YN++I ++ D+ A L EMV GFL T ++
Sbjct: 630 SMLGKNHK--PDGTAYNIMIHG---HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 476 LALTGNQEFAKEILRMQSRCGHALRHLKL 504
L G ++ + S H LR +L
Sbjct: 685 LHKEG------KVNELNSVIVHVLRSCEL 707
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 138/260 (53%), Gaps = 3/260 (1%)
Query: 142 RRGPT--PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
RRG + + L + Y G H+A+ + M HG + ++ +++ +CK +
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 200 MAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
A R R C + +Y + +G+ A +VL+EM + G SP++VTYN L+
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
G+ ++ +A +MK++ DVV+Y+T++ GF + +V ++ RV EMV G+
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P TY++LIQ C++ + A ++EEM+ G P+ TY +I C GD+E+A++
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 379 MGRMEKHGIRPSVQTYNVVI 398
M + G+ P V TY+V+I
Sbjct: 543 HNEMVEKGVLPDVVTYSVLI 562
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG-DMERAVEYMG 380
+ ++ +++ + + AL + G +P + +YN V+ S ++ A
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 381 RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFV 440
M + + P+V TYN++IR FC AG I+ L++F+KM + CLPN+ TYN LI
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME--TKGCLPNVVTYNTLIDGYCK 252
Query: 441 RKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHAL 499
+K +D KLL M +G P ++N V+NGL G + +L +R G++L
Sbjct: 253 LRKIDD---GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 141 LRRGPTPRAFAILA--ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
LR G P F A Y G +A+++ M E G D+ +++ +++ L K R
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 199 -EMAHSLFKTFRGRFRCDSVSYN-IIAN--------------GWCLIKRTPMALQVLKEM 242
E L K F V+Y+ +I N G+C+ A QV + M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
+ P YN ++ G+ R +R+A+ + EM K + VT +V G+V
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
+ V ++R+ + L+++ ++ + L V EM G +PN
Sbjct: 692 NELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 188/369 (50%), Gaps = 6/369 (1%)
Query: 123 ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDL 182
R + A + + +M L P+ F L + + + A+ +F M G + ++
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKE 241
+NTI+D LCK+K+V+ A L + D V+YN + +G C R A +++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M +R I P + T+N L+ + ++ EA EF+ EM +R + D+VTY+ +++G +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+ +++ +F MV G P V TY+ LI CK V++ + +F EM +G V N TY +
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I+G C +G + A E RM G+ P++ TYNV++ CD G+IEK L + M
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
++ TYN++I M K+ ++ A + + +G +P +T+ ++ GL G
Sbjct: 427 MD--ADIVTYNIIIRGMC---KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 482 QEFAKEILR 490
+ A + R
Sbjct: 482 RREADALFR 490
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + + A L++RM GP + L ++G+ A R+ M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTP 233
+ D+ +FN ++D K RV A + + R D V+Y+++ G C+ R
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A ++ M +G P +VTY+ L+ GY + ++ + F EM +R + VTYT ++
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G+ AG++ ++ +F MV G+ P++ TYN L+ LC ++ AL++ +M G
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
++ TYN++IRG+C +G++ A + + G+ P + TY ++ G + ++
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 414 FEKMGDGSCSCLPN 427
F KM + LPN
Sbjct: 489 FRKMKED--GILPN 500
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 133/301 (44%), Gaps = 36/301 (11%)
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+K+ + + + ++M GI + T N LL + RC QL A F +M K E +VT
Sbjct: 94 MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT 153
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
+ ++++GF V + +FD+MV G P+V YN +I LCK V NAL + M
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
G P++ TYN +I GLC SG A + M K I P V T+N +I G +
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 409 K-------------------------GLSMFEKMGDG--------SCSCLPNLDTYNVLI 435
+ GL M+ ++ + S C P++ TY++LI
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
+ KK E KL EM RG + T+ ++ G G A+EI R C
Sbjct: 334 NGYCKSKKVEH---GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 496 G 496
G
Sbjct: 391 G 391
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 7/195 (3%)
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
++ S +F MV+ +PS+A ++ L+ + K + ++E+M G NL T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GD 419
+++ C + A+ ++G+M K G PS+ T+ ++ FC + L MF++M G
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 420 GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
G PN+ YN +I + K+ ++ A LL M G P T+N +++GL +
Sbjct: 181 GY---KPNVVIYNTIIDGLCKSKQVDN---ALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 480 GNQEFAKEILRMQSR 494
G A ++ ++
Sbjct: 235 GRWSDATRMVSCMTK 249
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 186/406 (45%), Gaps = 41/406 (10%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV RM + P L +GK A+ + M E+GC+ + ++ +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 189 LDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
L+V+CK+ + +A L + R + D+V Y+II +G C A + EM +GI
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+ ++TYN L+ G+ + + + +M KRK +VVT++ ++ F G++++++
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ EM+ G+ P TY +LI CK++ + A + + MV KGC PN+ T+N++I G C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF-------------------------- 401
+ ++ +E +M G+ TYN +I+ F
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 402 ---------CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
CD GE EK L +FEK+ ++ YN++I M K +D A
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMEL--DIGIYNIIIHGMCNASKVDD---AWD 529
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
L + +G P T+N ++ GL G A+ + R GHA
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 186/403 (46%), Gaps = 37/403 (9%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L+ +M P + + +G+ A+ + M E + D ++ I+D
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LCK ++ A +LF + + ++YNI+ G+C R ++L++M +R I+P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+VT++ L+ + + +LREA E EM R D +TYT+++ GF + K+ ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
D MV G P++ T+N LI CK + + + L +F +M +G V + TYN +I+G C
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD---------- 419
G + A E M + P++ TY +++ CD GE EK L +FEK+
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 420 -----GSCSCL------------------PNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
G C+ P + TYN++I + K L A L +
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC---KKGPLSEAELLFRK 568
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHAL 499
M + G P +T+N ++ G+ + +++ RCG ++
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 182/371 (49%), Gaps = 6/371 (1%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
I+ R R A++ + ++ L P F+ L G+ A+ + M E G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 179 RQDLNSFNTILDVLCKT-KRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+ DL + NT+++ LC + K E + K + ++V+Y + N C +T +A++
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+L++M ER I V Y+ ++ G + L A+ F EM+ + +++TY ++ GF
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
AG ++ +M++ + P+V T++ LI K+ ++ A + +EM+ +G P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
TY +I G C +++A + + M G P+++T+N++I +C A I+ GL +F KM
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 418 GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA 477
+ + TYN LI K L VA +L EMV R P T+ +L+GL
Sbjct: 430 SLR--GVVADTVTYNTLIQGFCELGK---LNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 478 LTGNQEFAKEI 488
G E A EI
Sbjct: 485 DNGESEKALEI 495
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 145/292 (49%), Gaps = 3/292 (1%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ L+ M + P F++L + + GK A + M G D ++ +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSV--SYNIIANGWCLIKRTPMALQVLKEMAER 245
++D CK ++ A+ + + CD ++NI+ NG+C R L++ ++M+ R
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
G+ VTYNTL++G+ +L A E F EM RK ++VTY ++ G GE +K+
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
+F+++ ++ + + YN +I +C V +A +F + KG P + TYN++I G
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
LC G + A +ME+ G P TYN++IR G+ K + + E++
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 148/318 (46%), Gaps = 7/318 (2%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
W+ G K L+ +P + F ID + A L M P
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVT----FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-- 206
+ L + + +A ++ M GC ++ +FN +++ CK R++ LF+
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 207 TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
+ RG D+V+YN + G+C + + +A ++ +EM R + P +VTY LL G +
Sbjct: 430 SLRGVV-ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+A E F +++K K E+D+ Y ++HG A +V + +F + G+ P V TYN
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
+I LCKK + A L+F +M G P+ TYN++IR GD ++V+ + +++ G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 387 IRPSVQTYNVVIRYFCDA 404
T +VI D
Sbjct: 609 FSVDASTIKMVIDMLSDG 626
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 165/331 (49%), Gaps = 6/331 (1%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYN 220
K A+ +F M + F+ + + KTK+ ++ +L K + ++ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
I+ N +C ++ +A + ++ + G P +T++TL+ G ++ EA E M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
+ D++T T+V+G ++G+ ++ + D+MV G P+ TY ++ V+CK A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
+ + +M + + Y+++I GLC G ++ A ME GI ++ TYN++I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
FC+AG + G + M + PN+ T++VLI + FV++ L A +L EM+ R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKIN--PNVVTFSVLIDS-FVKEGK--LREAEELHKEMIHR 362
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
G P T+ +++G + + A +++ +
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 6/371 (1%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV RM P + + +G A+ + M E + D+ +++TI
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 189 LDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
+D LC+ ++ A SLFK + + V+YN + G C + +LK+M R I
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P ++T+N LL + + +L+EA E + EM R +++TY T++ G+ + + ++
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ D MVR P + T+ +LI+ C V + + VF + +G V N TY+++++G C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
SG ++ A E M HG+ P V TY +++ CD G++EK L +FE +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD--LG 472
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
+ Y +I M K ED A L + +G P T+ +++GL G+ A
Sbjct: 473 IVMYTTIIEGMCKGGKVED---AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 488 ILRMQSRCGHA 498
+LR G+A
Sbjct: 530 LLRKMEEDGNA 540
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 149/285 (52%), Gaps = 1/285 (0%)
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
L+ M S P F +L + + GK A ++ M G ++ ++NT++D C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 194 KTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
R+ A+++ R + D V++ + G+C++KR ++V + +++RG+ V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TY+ L++G+ + +++ A E F EM DV+TY ++ G G+++K+ +F+++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
++ + + Y +I+ +CK V++A +F + KG PN+ TY V+I GLC G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
A + +ME+ G P+ TYN +IR G++ + E+M
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 159/316 (50%), Gaps = 6/316 (1%)
Query: 176 HGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPM 234
+G ++ + N +++ C+ + A+S+ K + + D+ ++N + G L +
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A+ ++ M E G P +VTYN+++ G R A + +M++R + DV TY+T++
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G + + +F EM G+ SV TYN+L++ LCK + L+ ++MV + VP
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N+ T+NV++ G ++ A E M GI P++ TYN ++ +C + + +M
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
+ M CS P++ T+ LI + K+ +D K+ + RG + T++ ++
Sbjct: 357 DLMVRNKCS--PDIVTFTSLIKGYCMVKRVDD---GMKVFRNISKRGLVANAVTYSILVQ 411
Query: 475 GLALTGNQEFAKEILR 490
G +G + A+E+ +
Sbjct: 412 GFCQSGKIKLAEELFQ 427
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 5/265 (1%)
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
K+ + L K++ GI+ + T N ++ + RC + A+ ++ K E D T+
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
T++ G + G+V ++ + D MV G P V TYN+++ +C+ AL + +M
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
+ ++ TY+ +I LC G ++ A+ ME GI+ SV TYN ++R C AG+
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 410 GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTF 469
G + + M S +PN+ T+NVL+ +FV K L A +L EM+ RG P T+
Sbjct: 282 GALLLKDM--VSREIVPNVITFNVLLD-VFV--KEGKLQEANELYKEMITRGISPNIITY 336
Query: 470 NRVLNGLALTGNQEFAKEILRMQSR 494
N +++G + A +L + R
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVR 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 301 EVKKSKRV--FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
++KK + F EM+R+ +PS+ ++ + + L +++ G N+ T
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
N++I C A +G++ K G P T+N +I+ G++ + + + ++M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
+ C P++ TYN +++ + +S D +A LL +M +R FT++ +++ L
Sbjct: 186 ENGCQ--PDVVTYNSIVNGIC---RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 479 TG 480
G
Sbjct: 241 DG 242
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 190/395 (48%), Gaps = 17/395 (4%)
Query: 95 ALQFFKHLDR-HPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTP-----R 148
ALQ F + + HP + H+ + + +R R + +L M LR P
Sbjct: 65 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESL---MADLRNSYPPIKCGEN 121
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
F L Y AG+ ++R+F+ + + G ++ + S NT+L+VL + +R ++ H++FK
Sbjct: 122 LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 209 RGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
+ F + + N++ C A +VL E+ G+ P +VTY T+L GY
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGD 241
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+ A EM R D TYT ++ G+ G ++ V D+M + + P+ TY
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
+I+ LCK+ A +F+EM+ + +P+ + VI LC ++ A +M K+
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
P + +I + C G + + +F++ GS +P+L TYN LI+ M + +
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGS---IPSLLTYNTLIAGMCEKG---E 415
Query: 447 LVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
L AG+L +M +R P FT+N ++ GL+ GN
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 2/291 (0%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
+ D +A+ ++ + S+ P + + Y A G A RV M + G D
Sbjct: 203 KKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAT 262
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
++ ++D CK R A ++ + + V+Y ++ C K++ A + EM
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
ER P ++ H++ EA + +M K C D +T++H G V
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
+++++FDE + G +PS+ TYN LI +C+K + A ++++M + C PN TYNV+
Sbjct: 383 TEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
I GL +G+++ V + M + G P+ T+ ++ G+ E + +
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 120/259 (46%), Gaps = 5/259 (1%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
+D ++ ++ A T++ M P + ++ K A +F M E
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
D + ++D LC+ +V+ A L+ K + D+ + + + C R A +
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+ E E+G P+++TYNTL+ G +L EA + +M +RKC+ + TY ++ G
Sbjct: 388 LFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLS 446
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
G VK+ RV +EM+ G P+ T+ L + L K ++A+ + V G V +
Sbjct: 447 KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKE 505
Query: 358 TYNVVIRGLCHSGDMERAV 376
++ + ++ +G++++ V
Sbjct: 506 SWELFLKKF--AGELDKGV 522
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 17/425 (4%)
Query: 58 LESDPGTLAEALENSPFRWTPELVD--EVLKRLWNHGPKAL--QFFKHLDRHPTYIHSPS 113
LE + + +++ P P +VD +VL ++ L F H++ H
Sbjct: 50 LEEEIDLFCKMIQSRPL---PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIG-HDLY 105
Query: 114 GFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM 173
+ I+ R + A ++V +M P + L + + A+ + M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRT 232
E G R D+ +NTI+D CK V A LF R R D+V+YN + G C R
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
A +++++M R I P ++T+ ++ + + + EA + + EM +R + DV TY ++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 293 VHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
++G + G V ++K++ D MV G +P V TYN LI CK V +F EM +G
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLS 412
V + TYN +I+G +G + A E RM+ RP+++TY++++ C +EK L
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALV 402
Query: 413 MFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
+FE M ++ TYN++I M ED A L + +G P ++ +
Sbjct: 403 LFENMQKSEIEL--DITTYNIVIHGMCKIGNVED---AWDLFRSLSCKGLKPDVVSYTTM 457
Query: 473 LNGLA 477
++G
Sbjct: 458 ISGFC 462
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 184/392 (46%), Gaps = 36/392 (9%)
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
L +M R P+ F+ + + A + + +F M G DL S+N +++ LC
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 194 KTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
+ R +A S+ K + + D V+ + + NG+C R A+ ++ +M E G P +V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
YNT++ G + + +A E F M++ D VTY ++V G +G + R+ +M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
V +VP+V T+ A+I V K+ A+ ++EEM + P++ TYN +I GLC G +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM------GD------- 419
+ A + + M G P V TYN +I FC + +++G +F +M GD
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 420 -----------------GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
PN+ TY++L+ + + + E +V L E + +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV----LFENMQKSE 411
Query: 463 LPRKF-TFNRVLNGLALTGNQEFAKEILRMQS 493
+ T+N V++G+ GN E A ++ R S
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 155/316 (49%), Gaps = 13/316 (4%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRFRC----DSVSYNIIANGWCLIKRTPMALQVL 239
F+ +L + K+K ++ SLF C D SYNI+ N C R +AL V+
Sbjct: 71 DFSKVLSKIAKSKNYDLVISLFHHME---VCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+M + G P +VT ++L+ G+ + +++ +A + +M++ DVV Y T++ G
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
G V + +FD M R G+ TYN+L+ LC +A + +MV + VPN+ T+
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
VI G A++ M + + P V TYN +I C G +++ M + M
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV- 306
Query: 420 GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
+ CLP++ TYN LI+ K+ ++ KL EM RG + T+N ++ G
Sbjct: 307 -TKGCLPDVVTYNTLINGFCKSKRVDE---GTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 480 GNQEFAKEIL-RMQSR 494
G + A+EI RM SR
Sbjct: 363 GRPDAAQEIFSRMDSR 378
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 39/323 (12%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A LVS+M + P + + + G + AV +F M G R D ++N+++
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 191 VLCKTKRVEMAHSLFK------------TF---------RGRF------------RC--- 214
LC + R A L + TF G+F RC
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D +YN + NG C+ R A Q+L M +G P +VTYNTL+ G+ + ++ E + F
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
EM +R D +TY T++ G+ AG ++ +F M P++ TY+ L+ LC
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMN 394
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
V+ AL++FE M ++ TYN+VI G+C G++E A + + G++P V +Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 395 NVVIRYFCDAGEIEKGLSMFEKM 417
+I FC + +K ++ KM
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKM 477
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 129/247 (52%), Gaps = 6/247 (2%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P F + + + GK A++++ M D+ ++N++++ LC RV+ A +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 205 FKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
+ C D V+YN + NG+C KR ++ +EMA+RG+ +TYNT+++GYF
Sbjct: 302 LDLMVTK-GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ + A E F M R ++ TY+ +++G + V+K+ +F+ M ++ + +
Sbjct: 361 QAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM 382
TYN +I +CK V++A +F + KG P++ +Y +I G C +++ +M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 383 EKHGIRP 389
++ G+ P
Sbjct: 478 QEDGLLP 484
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
K + + + M GI + +YN ++ RC + A +M K E DVVT
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTV 142
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
+++++GF V + + +M G P V YN +I CK V +A+ +F+ M
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
G + TYN ++ GLC SG A M M I P+V T+ VI F G+ +
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 410 GLSMFEKMGDGSCSCL-PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
+ ++E+M + C+ P++ TYN LI+ + + + ++ A ++L MV +G LP T
Sbjct: 263 AMKLYEEM---TRRCVDPDVFTYNSLINGLCMHGRVDE---AKQMLDLMVTKGCLPDVVT 316
Query: 469 FNRVLNGLALTGNQEFAKEILRMQSRCG 496
+N ++NG + + ++ R ++ G
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRG 344
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
W+ + ++ D P I F ID+ + ++ A L M RR P
Sbjct: 225 WSDAARLMRDMVMRDIVPNVIT----FTAVIDVFVKEGKFSEAMKLYEEMT--RRCVDPD 278
Query: 149 AFAI--LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK 206
F L G+ A ++ M GC D+ ++NT+++ CK+KRV+ LF+
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 207 TFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCH 265
R D+++YN I G+ R A ++ M R P + TY+ LL G
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNW 395
Query: 266 QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
++ +A F M+K + E+D+ TY ++HG G V+ + +F + GL P V +Y
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
+I C+K + L++ +M G +P
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 230 KRTPMALQ----VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
KR+ M L+ + +M + P++V ++ +L + F M+ D
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
+ +Y +++ + V +M++ G P V T ++LI C+ + V +A+ +
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
+M G P++ YN +I G C G + AVE RME+ G+R TYN ++ C +G
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 406 EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
+ M +PN+ T+ +I K + A KL EM R P
Sbjct: 224 RWSDAARLMRDMVMRDI--VPNVITFTAVIDVFVKEGKFSE---AMKLYEEMTRRCVDPD 278
Query: 466 KFTFNRVLNGLALTGNQEFAKEILRM 491
FT+N ++NGL + G + AK++L +
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDL 304
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 184/357 (51%), Gaps = 11/357 (3%)
Query: 143 RGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
+G TP +++ + Y G+ + ++ M G + + + +I+ +LC+ ++
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 201 AHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A F + R D+V Y + +G+C A + EM R I+P ++TY ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
G+ + + EA + F EM + E D VT+T +++G+ AG +K + RV + M++AG P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
+V TY LI LCK+ + +A + EM G PN+ TYN ++ GLC SG++E AV+ +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISAM 438
G E G+ TY ++ +C +GE++K + ++M G G P + T+NVL++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG---LQPTIVTFNVLMNGF 571
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR-MQSR 494
+ ED KLL M+ +G P TFN ++ + N + A I + M SR
Sbjct: 572 CLHGMLED---GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 168/348 (48%), Gaps = 7/348 (2%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT-KRVEMAH 202
G PR F + + G A RVF M +G ++S N L L K + A
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 231
Query: 203 SLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+F+ F C +V SYNI+ + C + R A +L M +G +P +++Y+T++ GY
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
R +L + W+ MK++ + + Y +++ ++ +++ F EM+R G++P
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
Y LI CK+ ++ A F EM + P++ TY +I G C GDM A +
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M G+ P T+ +I +C AG ++ + M CS PN+ TY LI +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLC-- 467
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
K DL A +LL EM G P FT+N ++NGL +GN E A +++
Sbjct: 468 -KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 12/363 (3%)
Query: 141 LRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
+R+G P + L + + G A + F MH D+ ++ I+ C+ +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 199 EMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
A LF + F DSV++ + NG+C A +V M + G SP +VTY TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
+ G + L A E EM K + ++ TY ++V+G +G ++++ ++ E AGL
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
TY L+ CK + A + +EM+GKG P + T+NV++ G C G +E +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 378 YMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS--CLPNLDTYNVLI 435
+ M GI P+ T+N +++ +C ++ ++++ M CS P+ TY L+
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM----CSRGVGPDGKTYENLV 638
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
K+ ++ A L EM +GF T++ ++ G A+E+ R
Sbjct: 639 KG---HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 496 GHA 498
G A
Sbjct: 696 GLA 698
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 122 AARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQD 181
A M+D A+ + + M P + L + G A + M + G + +
Sbjct: 434 AGHMKD---AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLK 240
+ ++N+I++ LCK+ +E A L F D+V+Y + + +C A ++LK
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
EM +G+ PT+VT+N L+ G+ L + + M + + T+ ++V + +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+K + ++ +M G+ P TY L++ CK ++ A +F+EM GKG +++TY+
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
V+I+G A E +M + G+ + ++
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 184/357 (51%), Gaps = 11/357 (3%)
Query: 143 RGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
+G TP +++ + Y G+ + ++ M G + + + +I+ +LC+ ++
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 201 AHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A F + R D+V Y + +G+C A + EM R I+P ++TY ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
G+ + + EA + F EM + E D VT+T +++G+ AG +K + RV + M++AG P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
+V TY LI LCK+ + +A + EM G PN+ TYN ++ GLC SG++E AV+ +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISAM 438
G E G+ TY ++ +C +GE++K + ++M G G P + T+NVL++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG---LQPTIVTFNVLMNGF 571
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR-MQSR 494
+ ED KLL M+ +G P TFN ++ + N + A I + M SR
Sbjct: 572 CLHGMLED---GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 168/348 (48%), Gaps = 7/348 (2%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT-KRVEMAH 202
G PR F + + G A RVF M +G ++S N L L K + A
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 231
Query: 203 SLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+F+ F C +V SYNI+ + C + R A +L M +G +P +++Y+T++ GY
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
R +L + W+ MK++ + + Y +++ ++ +++ F EM+R G++P
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
Y LI CK+ ++ A F EM + P++ TY +I G C GDM A +
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M G+ P T+ +I +C AG ++ + M CS PN+ TY LI +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLC-- 467
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
K DL A +LL EM G P FT+N ++NGL +GN E A +++
Sbjct: 468 -KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 12/363 (3%)
Query: 141 LRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
+R+G P + L + + G A + F MH D+ ++ I+ C+ +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 199 EMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
A LF + F DSV++ + NG+C A +V M + G SP +VTY TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
+ G + L A E EM K + ++ TY ++V+G +G ++++ ++ E AGL
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
TY L+ CK + A + +EM+GKG P + T+NV++ G C G +E +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 378 YMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS--CLPNLDTYNVLI 435
+ M GI P+ T+N +++ +C ++ ++++ M CS P+ TY L+
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM----CSRGVGPDGKTYENLV 638
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
K+ ++ A L EM +GF T++ ++ G A+E+ R
Sbjct: 639 KG---HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 496 GHA 498
G A
Sbjct: 696 GLA 698
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 122 AARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQD 181
A M+D A+ + + M P + L + G A + M + G + +
Sbjct: 434 AGHMKD---AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLK 240
+ ++N+I++ LCK+ +E A L F D+V+Y + + +C A ++LK
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
EM +G+ PT+VT+N L+ G+ L + + M + + T+ ++V + +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+K + ++ +M G+ P TY L++ CK ++ A +F+EM GKG +++TY+
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
V+I+G A E +M + G+ + ++
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 194/401 (48%), Gaps = 10/401 (2%)
Query: 98 FFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERY 157
F + L P I S F + + A+M + L +M +L +F IL +
Sbjct: 67 FCEMLQSRP--IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 124
Query: 158 AAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDS 216
+ A+ + M + G R + + ++L+ C+ R + A SL + G F +
Sbjct: 125 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 184
Query: 217 VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLE 276
V YN + NG C + AL+V M ++GI VTYNTL+ G + +A +
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
M KRK + +V+ +T ++ F G + +++ ++ EM+R +VP+V TYN+LI C C
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
+ +A +F+ MV KGC P++ TYN +I G C S +E ++ M G+ TYN
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED-LVVAGKLLI 455
+I +C AG++ +F +M D C P++ TYN+L+ + K E LV+ L
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVD--CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 456 EMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+D + T+N ++ GL T + A + R +R G
Sbjct: 423 SEMDVDII----TYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 176/356 (49%), Gaps = 6/356 (1%)
Query: 136 SRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT 195
+M L P+ L + + AV + SM G ++ +NT+++ LCK
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 196 KRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
+ + A +F + R D+V+YN + +G R A ++L++M +R I P ++ +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
L+ + + L EA + EM +R +V TY ++++GF + G + +K +FD MV
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
G P V TYN LI CK V++ + +F EM +G V + TYN +I G C +G +
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
A + RM G+ P + TYN+++ C+ G+IEK L M E + ++ TYN++
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD--VDIITYNII 435
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
I + +++ L A L + +G P + +++GL G Q A ++ R
Sbjct: 436 IQGLC---RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+T A L+ M + P F L + + G A ++ M ++ ++N+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 188 ILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
+++ C + A +F +G F D V+YN + G+C KR +++ EM +
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFP-DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
G+ TYNTL+ GY + +L A + F M D+VTY ++ G+++K+
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
+ +++ ++ + + TYN +IQ LC+ D ++ A +F + KG P+ Y +I G
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
LC G A + RM++ G PS + Y+ +R
Sbjct: 474 LCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+F EM+++ +PS+ + ++ V+ K + + ++ +M G +L ++ ++I C
Sbjct: 66 LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFC 125
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+ A+ +G+M K G RPS+ T ++ FC ++ +S+ + M DG +PN
Sbjct: 126 RCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-DGF-GFVPN 183
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
+ YN +I+ + K+ DL A ++ M +G T+N +++GL+ +G A
Sbjct: 184 VVIYNTVINGLC---KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 488 ILR 490
+LR
Sbjct: 241 LLR 243
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 188/412 (45%), Gaps = 11/412 (2%)
Query: 91 HGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAF 150
P + + FK + ++ S I+ A D+ + L+SR+R R R+F
Sbjct: 56 EAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSF 115
Query: 151 AILAERYAAAGKPHRAVRVFISM-HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF---- 205
++ Y A P +AV +F M E C++ + SFN++L+V+ +
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 206 -KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ +S+N++ C ++ A++V + M ER P TY TL+ G +
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
++ EA EM+ C V Y ++ G G++ + ++ D M G VP+ TY
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
N LI LC K + A+ + E MV C+PN TY +I GL AV + ME+
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKS 444
G + Y+V+I G+ E+ +S++ KM + C PN+ Y+VL+ + K
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK--PNIVVYSVLVDGLCREGKP 413
Query: 445 EDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+ A ++L M+ G LP +T++ ++ G TG E A ++ + + G
Sbjct: 414 NE---AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 194/394 (49%), Gaps = 12/394 (3%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFA 151
+A++ F+ + P P G+ + +D + A L+ M+S P+P +
Sbjct: 205 RAIEVFRGM---PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261
Query: 152 ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR 211
+L + G R ++ +M GC + ++NT++ LC +++ A SL +
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 212 FRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLRE 269
+C + V+Y + NG +R A+++L M ERG Y+ L+ G F+ + E
Sbjct: 322 -KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A + +M ++ C+ ++V Y+ +V G G+ ++K + + M+ +G +P+ TY++L++
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
K + A+ V++EM GC N Y+V+I GLC G ++ A+ +M GI+P
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMF-EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
Y+ +I+ C G ++ L ++ E + P++ TYN+L+ + ++K D+
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK---DIS 557
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
A LL M+DRG P T N LN L+ N
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 35/277 (12%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A +L +M P +++L + GKP+ A + M GC + ++++++
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 191 VLCKTKRVEMAHSLFKTF------RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
KT E A ++K R +F Y+++ +G C + R A+ V +M
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKF-----CYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM---KKRKCEIDVVTYTTMVHGFGVAGE 301
GI P V Y++++KG + A + + EM ++ K + DVVTY ++ G + +
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD--C-------------------VQNA 340
+ ++ + + M+ G P V T N + L +K C V A
Sbjct: 556 ISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGA 615
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
+ E M+GK P +T+ +++R +C + A++
Sbjct: 616 CTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 202/411 (49%), Gaps = 8/411 (1%)
Query: 79 ELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM 138
+L+ EVL+R + A +FF + H + + I A+ R + T +++ M
Sbjct: 162 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM 221
Query: 139 RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
+ + T F I + +AAA + +AV +F M ++ + + + N +LD L + K
Sbjct: 222 GT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG 280
Query: 199 EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
+ A LF + RF + ++Y ++ NGWC ++ A ++ +M ++G+ P +V +N +L
Sbjct: 281 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
+G R + +A + F MK + +V +YT M+ F ++ + FD+MV +GL
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P A Y LI + + + +EM KG P+ TYN +I+ + + E A
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISA 437
+M ++ I PS+ T+N++++ + A E G +++E+M G C P+ ++Y VLI
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC---PDDNSYTVLIRG 517
Query: 438 MFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ KS + A + L EM+D+G +N+ G E +E+
Sbjct: 518 LIGEGKSRE---ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 565
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
R F DS +YN + + ++ + VL+EM +G+ TM T+ +K + + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 246
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
+A F MKK K +I V T ++ G A K+++ +FD++ + P++ TY L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLL 305
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
C+ + A ++ +M+ +G P++ +NV++ GL S A++ M+ G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
P+V++Y ++IR FC K +
Sbjct: 366 PNVRSYTIMIRDFC----------------------------------------KQSSME 385
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
A + +MVD G P + ++ G + E+L+ GH
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 211/449 (46%), Gaps = 17/449 (3%)
Query: 62 PGT-LAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAID 120
PG+ L AL+ + + ELV + RL + FK + P + SPS F+ ++
Sbjct: 84 PGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVN 143
Query: 121 IAARMRDYTTAWTLV-SRMRSLRRGPTPRA--FAILAERYAAAGKPHRAVRVF--ISMHE 175
+ R++ AW+LV R+RS A F +L RYA AG +A+R F +E
Sbjct: 144 SLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYE 203
Query: 176 HGCRQ--DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVS----YNIIANGWCLI 229
C+ +L +LD LCK V A + G + V +NI+ NGW
Sbjct: 204 PVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRS 263
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
++ A ++ +EM + PT+VTY TL++GY R +++ A E EMK + EI+ + +
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVF 323
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
++ G G AG + ++ + + P++ TYN+L++ CK + A + + M+
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
+G P TYN + E + ++ + G P TY+++++ C+ G++
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 410 GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTF 469
+ + ++M + P+L T +LI + + E L A + V RG +P+ TF
Sbjct: 444 AMQVNKEMKNRGID--PDLLTTTMLIHLLC---RLEMLEEAFEEFDNAVRRGIIPQYITF 498
Query: 470 NRVLNGLALTGNQEFAKEILRMQSRCGHA 498
+ NGL G + AK + + S H+
Sbjct: 499 KMIDNGLRSKGMSDMAKRLSSLMSSLPHS 527
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 184/371 (49%), Gaps = 15/371 (4%)
Query: 107 TYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRA 166
T IH D A + D T++ +V P + L Y G A
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIV---------PDVCTYNSLIYGYWKEGLVGLA 408
Query: 167 VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANG 225
+ V M GC+ ++ S+ ++D CK +++ A+++ + ++V +N + +
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
+C R P A+++ +EM +G P + T+N+L+ G +++ A +M +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
VTY T+++ F GE+K+++++ +EMV G TYN+LI+ LC+ V A +FE
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
+M+ G P+ + N++I GLC SG +E AVE+ M G P + T+N +I C AG
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 406 EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
IE GL+MF K+ P+ T+N L+S + K + A LL E ++ GF+P
Sbjct: 649 RIEDGLTMFRKLQAEGIP--PDTVTFNTLMSWLC---KGGFVYDACLLLDEGIEDGFVPN 703
Query: 466 KFTFNRVLNGL 476
T++ +L +
Sbjct: 704 HRTWSILLQSI 714
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 185/405 (45%), Gaps = 40/405 (9%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ A + M S + PT F ++ + + A + A+ + M +HGC + + T
Sbjct: 198 HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQT 257
Query: 188 ILDVLCKTKRVEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG 246
++ L K RV A L + F D+ ++N + G C R A +++ M RG
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
+P +TY L+ G + ++ A + F + K ++V + T++HGF G + +K
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAK 373
Query: 307 RVFDEMVRA-GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
V +MV + G+VP V TYN+LI K+ V AL V +M KGC PN+ +Y +++ G
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
C G ++ A + M G++P+ +N +I FC I + + +F +M C
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK-- 491
Query: 426 PNLDTYNVLISAM-----------FVRKKSEDLVVAG---------------------KL 453
P++ T+N LIS + +R + VVA KL
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 454 LIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
+ EMV +G + T+N ++ GL G + A+ + R GHA
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 203/482 (42%), Gaps = 81/482 (16%)
Query: 80 LVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAA--RMRDYTTAWTLVSR 137
+V E+L H A F+ L R P+ F + + A + + +A +L+
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKI----PPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
M P + L + + + A+++ M GC D +FN ++ LCK R
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 198 VEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQ------------------- 237
+ A + R F D ++Y + NG C I R A
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 238 ------------VLKEMAER-GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
VL +M GI P + TYN+L+ GY++ + A E +M+ + C+
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
+V +YT +V GF G++ ++ V +EM GL P+ +N LI CK+ + A+ +F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF--- 401
EM KGC P++ T+N +I GLC +++ A+ + M G+ + TYN +I F
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 402 --------------------------------CDAGEIEKGLSMFEKM-GDGSCSCLPNL 428
C AGE++K S+FEKM DG P+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA---PSN 599
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ N+LI+ + E+ V K EMV RG P TFN ++NGL G E +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQK---EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 489 LR 490
R
Sbjct: 657 FR 658
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 182/432 (42%), Gaps = 46/432 (10%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
++L NS + TP + ++L+ N +++ F Y HS ++ I
Sbjct: 67 DSLRNSFHKITPFQLYKLLELPLNVS-TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANG 125
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE-HGCRQDLNSF 185
++ T L+ +M+ F + Y AG P + R+ + M + C S+
Sbjct: 126 EFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY 185
Query: 186 NTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
N +L++L C V+ N V +M R
Sbjct: 186 NVVLEILVSGN-----------------CHKVAAN-----------------VFYDMLSR 211
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
I PT+ T+ ++K + +++ A +M K C + V Y T++H V ++
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
++ +EM G VP T+N +I LCK D + A + M+ +G P+ TY ++ G
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
LC G ++ A + R+ K P + +N +I F G ++ ++ M S +
Sbjct: 332 LCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT-SYGIV 386
Query: 426 PNLDTYNVLISAMFVRKKSEDLV-VAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
P++ TYN LI + E LV +A ++L +M ++G P +++ +++G G +
Sbjct: 387 PDVCTYNSLIYGYW----KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 485 AKEILRMQSRCG 496
A +L S G
Sbjct: 443 AYNVLNEMSADG 454
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 36/292 (12%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
+D ++ A+ +++ M + P F L + + AV +F M GC
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 179 RQDLNSFNTILDVLCKTKRVEMA-------------------HSLFKTF--RGRFR---- 213
+ D+ +FN+++ LC+ ++ A ++L F RG +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 214 -----------CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
D ++YN + G C A + ++M G +P+ ++ N L+ G
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
R + EA EF EM R D+VT+ ++++G AG ++ +F ++ G+ P
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
T+N L+ LCK V +A L+ +E + G VPN T++++++ + ++R
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 16/381 (4%)
Query: 77 TPELVDEVLKRLW---NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWT 133
+PE V EVL RL+ ++G KAL+FFK+ + + FE + I ARMR + AW
Sbjct: 65 SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWA 124
Query: 134 LVSRMRSLRRGPTPRAF---AILAERYAAAGKPHRAVRVFISMHEHGCRQD--LNSFNTI 188
L++ +R + P +F +IL + A G + F+ M + R+ ++ FN +
Sbjct: 125 LMAEVR--KDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNIL 182
Query: 189 LDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS 248
L C + ++ A S+F+ RF D + NI+ G+ EM +RG
Sbjct: 183 LRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFK 242
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P VTY + G+ + EA F +M + +I V TT++HG GVA K++++
Sbjct: 243 PNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQL 302
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
FDE+ + GL P YNAL+ L K V A+ V +EM KG P+ T++ + G+
Sbjct: 303 FDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMK 362
Query: 369 SGD--MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD-GSCSCL 425
S + EY +M++ + P T ++++ FC GE+ GL +++ M + G C
Sbjct: 363 SKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYC--- 419
Query: 426 PNLDTYNVLISAMFVRKKSED 446
P+ +L +A+ R+++ D
Sbjct: 420 PHGHALELLTTALCARRRAND 440
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 148 RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT 207
R + ++ Y + + ++ F M ++G N FN +L + + S F
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 208 FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
+ + D S+ I+ G C + +L E+ E G SP +V Y TL+ G + ++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
+A + F EM K + TYT +++G G K+ ++++M G+ P++ TYN +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
+ LCK ++A VF+EM +G N+ TYN +I GLC + A + + +M+ GI
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
P++ TYN +I FC G++ K LS+ + S P+L TYN+L+S F RK D
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS--PSLVTYNILVSG-FCRKG--DT 389
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
A K++ EM +RG P K T+ +++ A + N E A ++
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 184/394 (46%), Gaps = 42/394 (10%)
Query: 108 YIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAV 167
++ + F + + + W+ + +S + +F IL + AG+ ++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 168 RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF------------KTF----RGR 211
+ I + E G ++ + T++D CK +E A LF +T+ G
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 212 FRC---------------DSV-----SYNIIANGWCLIKRTPMALQVLKEMAERGISPTM 251
F+ D V +YN + N C RT A QV EM ERG+S +
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
VTYNTL+ G R +L EA + +MK +++TY T++ GF G++ K+ + +
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
+ GL PS+ TYN L+ C+K A + +EM +G P+ TY ++I S +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
ME+A++ ME+ G+ P V TY+V+I FC G++ + +F+ M + +C PN Y
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE--PNEVIY 481
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
N +I + ++ S A KLL EM ++ P
Sbjct: 482 NTMILG-YCKEGSS--YRALKLLKEMEEKELAPN 512
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 147/290 (50%), Gaps = 1/290 (0%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
+ + +M+ P + + + G+ A +VF M E G ++ ++NT++
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LC+ ++ A+ + + + ++YN + +G+C + + AL + +++ RG+SP
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++VTYN L+ G+ R A + EM++R + VTYT ++ F + ++K+ ++
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
M GLVP V TY+ LI C K + A +F+ MV K C PN YN +I G C
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
G RA++ + ME+ + P+V +Y +I C + ++ + EKM D
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 127/242 (52%), Gaps = 7/242 (2%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDS-VSYN 220
K + A +V M G +L ++NT++D C ++ A SL + + R S V+YN
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
I+ +G+C T A +++KEM ERGI P+ VTY L+ + R + +A + L M++
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
DV TY+ ++HGF + G++ ++ R+F MV P+ YN +I CK+ A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLC---HSGDMERAVEYMGRMEKHGIRPSVQTYNVV 397
L + +EM K PN+ +Y +I LC S + ER VE +M GI PS +++
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE---KMIDSGIDPSTSILSLI 554
Query: 398 IR 399
R
Sbjct: 555 SR 556
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 140/323 (43%), Gaps = 42/323 (13%)
Query: 206 KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCH 265
+T + +FR Y +I N + + +++ EM + G P +N LL
Sbjct: 88 ETSKTKFRL----YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSS 143
Query: 266 QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
+ W FF E K K +DV ++ ++ G AGE++KS + E+ G P+V Y
Sbjct: 144 SFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYT 202
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
LI CKK ++ A +F EM G V N TY V+I GL +G ++ E +M++
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL-------------------- 425
G+ P++ TYN V+ C G + +F++M + SC
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 426 -------------PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
PNL TYN LI K L A L ++ RG P T+N +
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGK---LGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 473 LNGLALTGNQEFAKEILR-MQSR 494
++G G+ A ++++ M+ R
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEER 402
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 111 SPSGFEHAIDIAA--RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
SPS + I ++ R D + A +V M P+ + IL + +A + +A++
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGW 226
+ +SM E G D+++++ ++ C ++ A LFK+ + C + V YN + G+
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK-NCEPNEVIYNTMILGY 488
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA 270
C + AL++LKEM E+ ++P + +Y +++ + + +EA
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 210/416 (50%), Gaps = 19/416 (4%)
Query: 65 LAEALENSPFRWTPELVDEVLKRL-WNHGP--KALQFFKHLDRHPTYIHSPSGFEHAIDI 121
L E+L +S + +L+D VLKR+ ++HG + L+F+++ + HS + + I
Sbjct: 58 LKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYI 117
Query: 122 AARMRDYTTAWTL-VSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQ 180
R R + W L + R R +PR ++ R A + V F
Sbjct: 118 LGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF 177
Query: 181 -DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVL 239
D FN +L LC+ K + A +++ + + +F+ D ++NI+ +GW K + A
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+EM +G+ P +VTYN+L+ Y + ++ +A++ +M++ + DV+TYTT++ G G+
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
G+ K++ V EM G P VA YNA I+ C + +A + +EMV KG PN TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-- 417
N+ R L + D+ R+ E RM + P+ Q+ +I+ F +++ + ++E M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 418 -GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
G GS S + ++ + A K E+ A K L+EMV++G P +F R+
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLA-----KVEE---AEKCLLEMVEKGHRPSNVSFKRI 462
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 46/276 (16%)
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE- 301
A RG + + +T+L R + + WE +E K++ + +++ TM G +
Sbjct: 100 AIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRK--DRSLISPRTMQVVLGRVAKL 157
Query: 302 --VKKSKRVFDEMVRAGLVPS---VATYNALIQVLCKKDCVQNALLVFEE---------- 346
V+++ F + R LVP A +NAL++ LC++ + +A V+
Sbjct: 158 CSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQ 215
Query: 347 ---------------------MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
M GKG P++ TYN +I C ++E+A + + +M +
Sbjct: 216 TFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE 275
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
P V TY VI G+ +K + ++M + C P++ YN I + ++
Sbjct: 276 EETPDVITYTTVIGGLGLIGQPDKAREVLKEMKE--YGCYPDVAAYNAAIRNFCIARRLG 333
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
D A KL+ EMV +G P T+N L+L +
Sbjct: 334 D---ADKLVDEMVKKGLSPNATTYNLFFRVLSLAND 366
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 190/378 (50%), Gaps = 15/378 (3%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A +LV +M + P F L + AV + M GC+ DL ++ +
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 189 LDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ LCK +++A SL K +G+ V YN I + C K AL + EM +GI
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P +VTYN+L++ + +A +M +RK +VVT++ ++ F G++ ++++
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
++DEM++ + P + TY++LI C D + A +FE M+ K C PN+ TYN +I+G C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLP 426
+ ++ +E M + G+ + TY +I F A E + +F++M DG LP
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG---VLP 464
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL-PRKFTFNRVLNGLALTGNQEFA 485
++ TY++L+ + K E +V + E + R + P +T+N ++ G+ G E
Sbjct: 465 DIMTYSILLDGLCNNGKVETALV----VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 486 KEILRMQSRCGHALRHLK 503
++ C +L+ +K
Sbjct: 521 WDLF-----CSLSLKGVK 533
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 182/380 (47%), Gaps = 9/380 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID ++ A L + M + P + L G+ A R+ M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E ++ +F+ ++D K ++ A L+ R D +Y+ + NG+C+ R
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A + + M + P +VTYNTL+KG+ + ++ E E F EM +R + VTYTT++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
HGF A E ++ VF +MV G++P + TY+ L+ LC V+ AL+VFE +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P++ TYN++I G+C +G +E + + G++P+V TY ++ FC G E+ ++
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
F +M + LP+ TYN LI A + D + +L+ EM F+ T V
Sbjct: 559 FREMKEE--GPLPDSGTYNTLIRAHL---RDGDKAASAELIREMRSCRFVGDASTIGLVT 613
Query: 474 NGLALTGNQEFAKEILRMQS 493
N L + K L+M S
Sbjct: 614 NMLH---DGRLDKSFLKMLS 630
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 175/367 (47%), Gaps = 6/367 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M R P+ F+ L A K + + M G +L +++ +++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 191 VLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ ++ +A + L K + + D V+ N + NG+C R A+ ++ +M E G P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
T+NTL+ G FR ++ EA M + C+ D+VTY +V+G G++ + +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+M + + P V YN +I LC V +AL +F EM KG PN+ TYN +IR LC+
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G A + M + I P+V T++ +I F G++ + ++++M S P++
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIF 362
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TY+ LI+ + + ++ A + M+ + P T+N ++ G + E+
Sbjct: 363 TYSSLINGFCMHDRLDE---AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 490 RMQSRCG 496
R S+ G
Sbjct: 420 REMSQRG 426
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 176/378 (46%), Gaps = 8/378 (2%)
Query: 110 HSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
H+ + I+ R + A ++++M L P L + + AV +
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK--TFRGRFRCDSVSYNIIANGWC 227
M E G + D +FNT++ L + R A +L +G + D V+Y I+ NG C
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLC 232
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
+AL +LK+M + I P +V YNT++ + +A F EM + +VV
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
TY +++ G + R+ +M+ + P+V T++ALI K+ + A +++EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
+ + P++ TY+ +I G C ++ A M P+V TYN +I+ FC A +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
++G+ +F +M + N TY LI F ++ ++ + K +MV G LP
Sbjct: 413 DEGMELFREMSQRGL--VGNTVTYTTLIHGFFQARECDNAQIVFK---QMVSDGVLPDIM 467
Query: 468 TFNRVLNGLALTGNQEFA 485
T++ +L+GL G E A
Sbjct: 468 TYSILLDGLCNNGKVETA 485
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
+ +A+ +F +MV P++ ++ ++ + + + +M+ GI ++ TY++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
+I FC ++ L++ KM P++ T N L++ + D V L+ +
Sbjct: 122 LINCFCRRSQLSLALAVLAKM--MKLGYEPDIVTLNSLLNGFCHGNRISDAV---SLVGQ 176
Query: 457 MVDRGFLPRKFTFNRVLNGL 476
MV+ G+ P FTFN +++GL
Sbjct: 177 MVEMGYQPDSFTFNTLIHGL 196
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 6/380 (1%)
Query: 110 HSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
HS I+ R R + A++ + ++ L P F L + A+ +
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCL 228
M E G + L + NT+++ LC +V A L + F+ + V+Y + N C
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+T +A+++L++M ER I V Y+ ++ G + L A+ F EM+ + + D++T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y T++ GF AG ++ +M++ + P+V T++ LI K+ ++ A + +EM+
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
+G PN TYN +I G C +E A++ + M G P + T+N++I +C A I+
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 409 KGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
GL +F +M + N TYN L+ +S L VA KL EMV R P +
Sbjct: 421 DGLELFREMSLR--GVIANTVTYNTLVQGFC---QSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 469 FNRVLNGLALTGNQEFAKEI 488
+ +L+GL G E A EI
Sbjct: 476 YKILLDGLCDNGELEKALEI 495
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 181/371 (48%), Gaps = 6/371 (1%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A L+ RM P + + +G+ A+ + M E + D ++ I
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 189 LDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
+D LCK ++ A +LF + F+ D ++YN + G+C R ++L++M +R I
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
SP +VT++ L+ + + +LREA + EM +R + +TY +++ GF ++++ +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ D M+ G P + T+N LI CK + + + L +F EM +G + N TYN +++G C
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
SG +E A + M +RP + +Y +++ CD GE+EK L +F K+ +
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL--D 507
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
+ Y ++I M K +D A L + +G +N +++ L + A
Sbjct: 508 IGIYMIIIHGMCNASKVDD---AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 488 ILRMQSRCGHA 498
+ R + GHA
Sbjct: 565 LFRKMTEEGHA 575
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 172/391 (43%), Gaps = 11/391 (2%)
Query: 106 PTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHR 165
PT I F A+ + Y L +M S + +I+ + K
Sbjct: 86 PTVID----FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSY 141
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIAN 224
A + + G D FNT+L+ LC RV A L + + ++ N + N
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
G CL + A+ ++ M E G P VTY +L + Q A E +M++R ++
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
D V Y+ ++ G G + + +F+EM G + TYN LI C + +
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
+M+ + PN+ T++V+I G + A + + M + GI P+ TYN +I FC
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
+E+ + M + M C P++ T+N+LI+ + +D + +L EM RG +
Sbjct: 382 NRLEEAIQMVDLMISKGCD--PDIMTFNILINGYCKANRIDDGL---ELFREMSLRGVIA 436
Query: 465 RKFTFNRVLNGLALTGNQEFAKEILR-MQSR 494
T+N ++ G +G E AK++ + M SR
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 150/323 (46%), Gaps = 8/323 (2%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
W+ G K L+ P + F ID + A L+ M P
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVT----FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-- 206
+ L + + + A+++ M GC D+ +FN +++ CK R++ LF+
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 207 TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
+ RG ++V+YN + G+C + +A ++ +EM R + P +V+Y LL G +
Sbjct: 430 SLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
L +A E F +++K K E+D+ Y ++HG A +V + +F + G+ YN
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
+I LC+KD + A ++F +M +G P+ TYN++IR D A E + M+ G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 387 IRPSVQTYNVVIRYFCDAGEIEK 409
V T +VI +GE++K
Sbjct: 609 FPADVSTVKMVINML-SSGELDK 630
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 154/315 (48%), Gaps = 6/315 (1%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYN 220
K AV +F M + + FN + + KTK+ E+ +L K + S+ + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
I+ N +C ++ A + ++ + G P V +NTLL G ++ EA E M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
+ ++T T+V+G + G+V + + D MV G P+ TY ++ V+CK A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
+ + +M + + Y+++I GLC G ++ A ME G + + TYN +I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
FC+AG + G + M S PN+ T++VLI + FV++ L A +LL EM+ R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKIS--PNVVTFSVLIDS-FVKEGK--LREADQLLKEMMQR 362
Query: 461 GFLPRKFTFNRVLNG 475
G P T+N +++G
Sbjct: 363 GIAPNTITYNSLIDG 377
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 141/286 (49%), Gaps = 3/286 (1%)
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
L+ M + P F++L + + GK A ++ M + G + ++N+++D C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 194 KTKRVEMAHSLFKTFRGRFRCDS--VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTM 251
K R+E A + + CD +++NI+ NG+C R L++ +EM+ RG+
Sbjct: 380 KENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
VTYNTL++G+ + +L A + F EM R+ D+V+Y ++ G GE++K+ +F +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
+ ++ + + Y +I +C V +A +F + KG + YN++I LC
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+ +A +M + G P TYN++IR + + E+M
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 15/289 (5%)
Query: 205 FKTFRGRFRCDSVSY-NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
F TF R ++SY + +++G IK A+ + ++M + PT++ +N L +
Sbjct: 46 FSTFSDR----NLSYRDKLSSGLVGIKADD-AVDLFRDMIQSRPLPTVIDFNRLFSAIAK 100
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
Q +M+ + + T + M++ F ++ + ++++ G P
Sbjct: 101 TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+N L+ LC + V AL + + MV G P L T N ++ GLC +G + AV + RM
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT--YNVLISAMFVR 441
+ G +P+ TY V+ C +G+ + + KM + + LD Y+++I +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK----LDAVKYSIIIDGLC-- 274
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
K L A L EM +GF T+N ++ G G + ++LR
Sbjct: 275 -KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 201/411 (48%), Gaps = 8/411 (1%)
Query: 79 ELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM 138
+L+ EVL+R + A +FF + H+ + + I A+ R + T +++ M
Sbjct: 162 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEM 221
Query: 139 RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
+ + T F I + +AAA + +AV +F M ++ + + + N +LD L + K
Sbjct: 222 GT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG 280
Query: 199 EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
+ A LF + RF + ++Y ++ NGWC ++ A ++ +M + G+ P +V +N +L
Sbjct: 281 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
+G R + +A + F MK + +V +YT M+ F ++ + FD+MV +GL
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P A Y LI + + + +EM KG P+ TYN +I+ + + E
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISA 437
+M ++ I PS+ T+N++++ + A E G +++++M G C P+ ++Y VLI
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC---PDDNSYTVLIRG 517
Query: 438 MFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ KS + A + L EM+D+G +N+ G E +E+
Sbjct: 518 LISEGKSRE---ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 565
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
R F S +YN + + ++ + VL+EM +G+ TM T+ +K + + +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 246
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
+A F MKK K +I V T ++ G A K+++ +FD++ + P++ TY L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLL 305
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
C+ + A ++ +M+ G P++ +NV++ GL S A++ M+ G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
P+V++Y ++IR FC K +
Sbjct: 366 PNVRSYTIMIRDFC----------------------------------------KQSSME 385
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
A + +MVD G P + ++ G + E+L+ GH
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 200/411 (48%), Gaps = 8/411 (1%)
Query: 79 ELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM 138
+L+ EVL+R + A +FF + H + + I A+ R + T +++ M
Sbjct: 161 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM 220
Query: 139 RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
+ + T F I + +AAA + +AV +F M ++ + + + N +LD L + K
Sbjct: 221 GT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG 279
Query: 199 EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
+ A LF + RF + ++Y ++ NGWC ++ A ++ +M + G+ P +V +N +L
Sbjct: 280 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
+G R + +A + F MK + +V +YT M+ F ++ + FD+MV +GL
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P A Y LI + + + +EM KG P+ TYN +I+ + + E
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISA 437
+M ++ I PS+ T+N++++ + A E G +++++M G C P+ ++Y VLI
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC---PDDNSYTVLIRG 516
Query: 438 MFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ KS + A + L EM+D+G +N+ G E +E+
Sbjct: 517 LISEGKSRE---ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 564
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 42/289 (14%)
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
R F DS +YN + + ++ + VL+EM +G+ TM T+ +K + + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 245
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
+A F MKK K +I V T ++ G A K+++ +FD++ + P++ TY L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLL 304
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
C+ + A ++ +M+ G P++ +NV++ GL S A++ M+ G
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
P+V++Y ++IR FC K +
Sbjct: 365 PNVRSYTIMIRDFC----------------------------------------KQSSME 384
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
A + +MVD G P + ++ G + E+L+ GH
Sbjct: 385 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 433
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 218/486 (44%), Gaps = 47/486 (9%)
Query: 57 VLESDP-GTLAE-ALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSG 114
VLE+ P G AE L F+ PE V VL+RL + +A+++F+ +R H P
Sbjct: 42 VLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVN-RAIEYFRWYERRTELPHCPES 100
Query: 115 FEHAIDIAARMRDYTT-----------------------------------AWTLVSRMR 139
+ + + AR R++ + +V MR
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 140 SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
+ P A+ L ++A + +F M E G ++ F T++ K RV+
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 200 MAHSLFKTFR-GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
A SL + D V YN+ + + + + MA + E+ G+ P VTY +++
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
+ ++L EA E F ++K + Y TM+ G+G AG+ ++ + + G +
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
PSV YN ++ L K V AL VFEEM K PNL+TYN++I LC +G ++ A E
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
M+K G+ P+V+T N+++ C + ++++ +MFE+M C+ P+ T+ LI +
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT--PDEITFCSLIDGL 457
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR--MQSRCG 496
+ +D A K+ +M+D + ++ G +E +I + + C
Sbjct: 458 GKVGRVDD---AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 497 HALRHL 502
L+ L
Sbjct: 515 PDLQLL 520
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 180/388 (46%), Gaps = 53/388 (13%)
Query: 60 SDPGTLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIH------SPS 113
D + E + +S R + ++K +NHG K D H Y SP
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE-------DGHKIYKDMINQNCSPD 516
Query: 114 G--FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFI 171
+D + + + +++ R P R+++IL AG + +F
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 172 SMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKR 231
SM E GC VL D+ +YNI+ +G+C +
Sbjct: 577 SMKEQGC------------VL----------------------DTRAYNIVIDGFCKCGK 602
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
A Q+L+EM +G PT+VTY +++ G + +L EA+ F E K ++ E++VV Y++
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++ GFG G + ++ + +E+++ GL P++ T+N+L+ L K + + AL+ F+ M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
C PN TY ++I GLC +A + M+K G++PS +Y +I AG I +
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 412 SMFEKM-GDGSCSCLPNLDTYNVLISAM 438
++F++ +G +P+ YN +I +
Sbjct: 783 ALFDRFKANGG---VPDSACYNAMIEGL 807
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 186/425 (43%), Gaps = 45/425 (10%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
+AL+ F+ + + + S + ID+ R TA+ L M+ P R I+
Sbjct: 361 EALKVFEEMKKDAA--PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRF 212
+R + K A +F M C D +F +++D L K RV+ A+ ++ K
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV-------------------- 252
R +S+ Y + + R ++ K+M + SP +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 253 ---------------TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+Y+ L+ G + E +E F MK++ C +D Y ++ GF
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
G+V K+ ++ +EM G P+V TY ++I L K D + A ++FEE K N+
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
Y+ +I G G ++ A + + + G+ P++ T+N ++ A EI + L F+ M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 418 GDGSCSCLPNLDTYNVLISAMF-VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+ C+ PN TY +LI+ + VRK ++ V EM +G P ++ +++GL
Sbjct: 719 KELKCT--PNQVTYGILINGLCKVRKFNKAFV----FWQEMQKQGMKPSTISYTTMISGL 772
Query: 477 ALTGN 481
A GN
Sbjct: 773 AKAGN 777
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 191/439 (43%), Gaps = 43/439 (9%)
Query: 90 NHGPKALQFFKHLDRHP----TYIH--------SPSGFEHAIDIAARMRD---------Y 128
N +A++ F+HL+++ TY + S F+ A + R R Y
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346
Query: 129 TTAWTLVSRMRSLRRG------------PTPRAFAILAERYAAAGKPHRAVRVFISMHEH 176
T + +M + P + IL + AGK A + SM +
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPM 234
G ++ + N ++D LCK+++++ A ++F+ + C D +++ + +G + R
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTPDEITFCSLIDGLGKVGRVDD 465
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A +V ++M + + Y +L+K +F + + + + +M + C D+ T +
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
AGE +K + +F+E+ VP +Y+ LI L K +F M +GCV
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+ YN+VI G C G + +A + + M+ G P+V TY VI +++ +F
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
E+ N+ Y+ LI K + A +L E++ +G P +T+N +L+
Sbjct: 646 EEAKSKRIEL--NVVIYSSLIDGF---GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 475 GLALTGNQEFAKEILRMQS 493
AL +E + ++ QS
Sbjct: 701 --ALVKAEEINEALVCFQS 717
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 7/256 (2%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA 149
N + L+ K PT + S ID A++ A+ L +S R
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGS----VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
++ L + + G+ A + + + G +L ++N++LD L K + + A F++ +
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 210 GRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
+C + V+Y I+ NG C +++ A +EM ++G+ P+ ++Y T++ G + +
Sbjct: 720 -ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
EA F K D Y M+ G + +F+E R GL T L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838
Query: 328 IQVLCKKDCVQNALLV 343
+ L K DC++ A +V
Sbjct: 839 LDTLHKNDCLEQAAIV 854
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 205/456 (44%), Gaps = 55/456 (12%)
Query: 88 LWNHGPK-----ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRD--YTTAWTLVSRMRS 140
+ N+G K A+ F+ +D Y P+ F + ++ + + A + RMR
Sbjct: 83 MKNYGRKGKVQEAVNVFERMD---FYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 141 LRRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQD----------------- 181
RG TP +F I + + +PH A+R+ +M GC +
Sbjct: 140 --RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 182 ------------------LNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNII 222
L++FN +L VLCK V+ L K + + +YN+
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 223 ANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKC 282
G C A++++ + E+G P ++TYN L+ G + + +EA + +M
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 283 EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL 342
E D TY T++ G+ G V+ ++R+ + V G VP TY +LI LC + AL
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+F E +GKG PN+ YN +I+GL + G + A + M + G+ P VQT+N+++ C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
G + + + M S P++ T+N+LI + K E+ A ++L M+D G
Sbjct: 438 KMGCVSDADGLVKVM--ISKGYFPDIFTFNILIHGYSTQLKMEN---ALEILDVMLDNGV 492
Query: 463 LPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
P +T+N +LNGL T E E + G A
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 203/443 (45%), Gaps = 46/443 (10%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
KAL+ F + + + H+ S + I+ + ++ MR +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 154 A-ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR- 211
A + Y GK AV VF M + C + S+N I+ VL + + AH ++ R R
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
D S+ I +C R AL++L M+ +G +V Y T++ G++ + E +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
E F +M + + T+ ++ G+VK+ +++ D++++ G++P++ TYN IQ L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
C++ + A+ + ++ +G P++ TYN +I GLC + + A Y+G+M G+ P
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 392 QTYNVVIRYFC-------------DA----------------------GEIEKGLSMF-E 415
TYN +I +C DA GE + L++F E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV-AGKLLIEMVDRGFLPRKFTFNRVLN 474
+G G PN+ YN LI + ++ +++ A +L EM ++G +P TFN ++N
Sbjct: 382 ALGKG---IKPNVILYNTLIKGL----SNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 475 GLALTGNQEFAKEILRMQSRCGH 497
GL G A ++++ G+
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGY 457
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 173/365 (47%), Gaps = 9/365 (2%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ A + +M + P + L Y G A R+ +G D ++ +
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG 246
++D LC A +LF G+ + + + YN + G A Q+ EM+E+G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
+ P + T+N L+ G + + +A M + D+ T+ ++HG+ +++ +
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+ D M+ G+ P V TYN+L+ LCK ++ + ++ MV KGC PNL T+N+++ L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS--CSC 424
C ++ A+ + M+ + P T+ +I FC G+++ ++F KM + S
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
P TYN++I A F K ++ +A KL EMVDR P +T+ +++G TGN
Sbjct: 602 TP---TYNIIIHA-FTEKL--NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 485 AKEIL 489
+ L
Sbjct: 656 GYKFL 660
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 147/333 (44%), Gaps = 11/333 (3%)
Query: 80 LVDEVLKRLWNHGP--KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSR 137
L + ++K L N G +A Q + I F ++ +M + A LV
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGL-IPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
M S P F IL Y+ K A+ + M ++G D+ ++N++L+ LCKT +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 198 VEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
E +KT + ++ ++NI+ C ++ AL +L+EM + ++P VT+ T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 257 LLKGYFRCHQLREAWEFFLEMKKR-KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
L+ G+ + L A+ F +M++ K TY ++H F V ++++F EMV
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
L P TY ++ CK V EM+ G +P+L T VI LC + A
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
+ RM + G+ P + CD + E
Sbjct: 692 AGIIHRMVQKGLVPE------AVNTICDVDKKE 718
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 136/330 (41%), Gaps = 55/330 (16%)
Query: 143 RGPTPRAFAILAERYAAAGKPH------------------RAVRVFISMHEHGCRQDLNS 184
G T RA A+ E KP+ A ++ M E G ++ +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 185 FNTILDVLCKTKRVEMAHSLFKTF--RGRF------------------------------ 212
FN +++ LCK V A L K +G F
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 213 ----RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
D +YN + NG C + ++ K M E+G +P + T+N LL+ R +L
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS-VATYNAL 327
EA EMK + D VT+ T++ GF G++ + +F +M A V S TYN +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
I +K V A +F+EMV + P+ TY +++ G C +G++ +++ M ++G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
PS+ T VI C + + + +M
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 193/436 (44%), Gaps = 46/436 (10%)
Query: 86 KRLWNHGPKALQFFKHLDRHPTYIHS---PS--GFEHAIDIAARMRDYTTAWTLVSRMRS 140
+++ +G LQF LD +HS PS F + + A+M Y +L +M+
Sbjct: 52 RKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQI 111
Query: 141 LRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
L P I+ + +P RA M + G DL +F ++L+ C R+E
Sbjct: 112 LGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIED 171
Query: 201 AHSLFK------------TFRGRFRC------------------------DSVSYNIIAN 224
A +LF T+ RC + V+YN +
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
G C I R A +L++M +R I P ++T+ L+ + + +L EA E + M +
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
DV TY ++++G + G + +++++F M R G P+ Y LI CK V++ + +F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
EM KG V N TY V+I+G C G + A E +M P ++TYNV++ C
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G++EK L +FE M N+ TY ++I M K ED A L + +G P
Sbjct: 412 GKVEKALMIFEYMRKREMDI--NIVTYTIIIQGMCKLGKVED---AFDLFCSLFSKGMKP 466
Query: 465 RKFTFNRVLNGLALTG 480
T+ +++G G
Sbjct: 467 NVITYTTMISGFCRRG 482
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 12/348 (3%)
Query: 89 WNHGPKALQFFKH---LDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGP 145
WN A+ F + P + + I + R A L ++M + P
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVV----TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 146 TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF 205
+ L G+ A + M + ++ +F ++D K ++ A L+
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 206 KT-FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ D +Y + NG C+ A Q+ M G P V Y TL+ G+ +
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
++ + + F EM ++ + +TYT ++ G+ + G ++ VF++M P + TY
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
N L+ LC V+ AL++FE M + N+ TY ++I+G+C G +E A + +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG-DGSCSCLPNLDTY 431
G++P+V TY +I FC G I + S+F+KM DG LPN Y
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF---LPNESVY 506
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 13/316 (4%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFR----GRFRCDSVSYNIIANGWCLIKRTPMALQVL 239
F +L V+ K R ++ SLF+ + C + NI+ + CL + A L
Sbjct: 85 DFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLC---TCNIVMHCVCLSSQPCRASCFL 141
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+M + G P +VT+ +LL GY +++ +A F ++ + +VVTYTT++
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
+ + +F++M G P+V TYNAL+ LC+ +A + +M+ + PN+ T+
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
+I G + A E M + + P V TY +I C G +++ MF M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 420 GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
C PN Y LI K+ ED K+ EM +G + T+ ++ G L
Sbjct: 322 N--GCYPNEVIYTTLIHGFCKSKRVED---GMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 480 GNQEFAKEIL-RMQSR 494
G + A+E+ +M SR
Sbjct: 377 GRPDVAQEVFNQMSSR 392
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
AL + M P+++ + LL + ++ F +M+ + T ++H
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
++ + ++ +M++ G P + T+ +L+ C + +++A+ +F++++G G P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N+ TY +IR LC + + AVE +M +G RP+V TYN ++ C+ G +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
M PN+ T+ LI A FV K L+ A +L M+ P FT+ ++N
Sbjct: 247 RDMMKRRIE--PNVITFTALIDA-FV--KVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 475 GLALTGNQEFAKEILRMQSRCG 496
GL + G + A+++ + R G
Sbjct: 302 GLCMYGLLDEARQMFYLMERNG 323
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 205/423 (48%), Gaps = 14/423 (3%)
Query: 77 TPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVS 136
T LV +VL+R N +A FF + Y+HS + +D+ + R++ W LV+
Sbjct: 131 TESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVN 190
Query: 137 RMRSLRRGP--TPRAFAILAERYAAAGKPHRAVRVFISMHE-HGCRQDLNSFNTILDVLC 193
M T + + R A +GK ++AV F+ M + +G + D + N+++D L
Sbjct: 191 EMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALV 250
Query: 194 KTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVT 253
K +E AH +F + D+ ++NI+ +G+C ++ A ++ M +P +VT
Sbjct: 251 KENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVT 310
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
Y + ++ Y + R E EM++ C +VVTYT ++H G + +V ++ V+++M
Sbjct: 311 YTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMK 370
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
G VP Y++LI +L K ++A +FE+M +G ++ YN +I H E
Sbjct: 371 EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDE 430
Query: 374 RAVEYMGRMEK---HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
A+ + RME P+V+TY +++ C +++ + M S ++ T
Sbjct: 431 MALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSI--DVST 488
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
Y +LI + + K E+ A E V +G +PR T +++ L + A+ L+
Sbjct: 489 YILLIRGLCMSGKVEE---ACLFFEEAVRKGMVPRDSTCKMLVDELE---KKNMAEAKLK 542
Query: 491 MQS 493
+QS
Sbjct: 543 IQS 545
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 198/412 (48%), Gaps = 46/412 (11%)
Query: 122 AARMRDYTTAWTLVSRMRSLRRGPTPRAFAI--LAERYAAAGKPHRAVRVFISMHEHGCR 179
+ R +Y + L+ M +R+G P L + + +AVRV + + G +
Sbjct: 99 SCRSGNYIESLHLLETM--VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-Q 155
Query: 180 QDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWC----------- 227
D+ ++N +++ CK R++ A + R + F D+V+YNI+ C
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 228 ------------------LIKRTPM------ALQVLKEMAERGISPTMVTYNTLLKGYFR 263
LI+ T + AL+++ EM RG+ P M TYNT+++G +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+ A+E ++ + CE DV++Y ++ G+ ++ +++ +M P+V T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
Y+ LI LC+ ++ A+ + + M KG P+ +Y+ +I C G ++ A+E++ M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
G P + YN V+ C G+ ++ L +F K+G+ CS PN +YN + SA++
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS--PNSSSYNTMFSALW---S 450
Query: 444 SEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
S D + A +++EM+ G P + T+N +++ L G + A E+L C
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 159/348 (45%), Gaps = 8/348 (2%)
Query: 112 PSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFA--ILAERYAAAGKPHRAVRV 169
P+ + I I A M + L L RG P F + G RA +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCL 228
++ GC D+ S+N +L L + E L K F + + V+Y+I+ C
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+ A+ +LK M E+G++P +Y+ L+ + R +L A EF M C D+V
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y T++ G+ ++ +F ++ G P+ ++YN + L AL + EM+
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
G P+ TYN +I LC G ++ A E + M PSV TYN+V+ FC A IE
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Query: 409 KGLSMFEKM-GDGSCSCLPNLDTYNVLISAM-FVRKKSEDLVVAGKLL 454
+++ E M G+G C PN TY VLI + F ++E + +A L+
Sbjct: 526 DAINVLESMVGNG---CRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT-KRVEMAHSLFKTFRGRFRCDSVSY 219
GK +A+ +F + E GC + +S+NT+ L + ++ H + + D ++Y
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
N + + C A ++L +M P++VTYN +L G+ + H++ +A M
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
C + TYT ++ G G AG ++ + +++VR + +++ Y+
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR---IDAISEYS 579
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 203/442 (45%), Gaps = 46/442 (10%)
Query: 77 TPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVS 136
P + EV+K+L N+ +F++ HS + + + A +
Sbjct: 68 NPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFE 127
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE-HGCRQDLNSFNTILDVLCKT 195
M+S P R L +A GK H A + + E GC +NS +L+ L K
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNS---LLNTLVKL 184
Query: 196 KRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
RVE A LF C D+ ++NI+ G C + + AL++L M+ G P +VTY
Sbjct: 185 DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTY 244
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRK-CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
NTL++G+ + ++L +A E F ++K C DVVTYT+M+ G+ AG+++++ + D+M+
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 314 RAGLVPS-----------------------------------VATYNALIQVLCKKDCVQ 338
R G+ P+ V T+ +LI C+ V
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
++EEM +G PN TY+++I LC+ + +A E +G++ I P YN VI
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
FC AG++ + + E+M C P+ T+ +LI ++ + + A + +MV
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCK--PDKITFTILIIGHCMKGR---MFEAVSIFHKMV 479
Query: 459 DRGFLPRKFTFNRVLNGLALTG 480
G P K T + +L+ L G
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAG 501
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TYN L + + A + F MK D V+ + GF V+ +K K F
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKS-----DGVSPNNRLLGFLVSSFAEKGKLHF--- 156
Query: 313 VRAGLVPS------VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
A L+ S N+L+ L K D V++A+ +F+E + + T+N++IRGL
Sbjct: 157 ATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C G E+A+E +G M G P + TYN +I+ FC + E+ K MF+ + GS C P
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CSP 275
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
++ TY +IS K+ + A LL +M+ G P TFN +++G A G A+
Sbjct: 276 DVVTYTSMISGYC---KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 487 EI 488
EI
Sbjct: 333 EI 334
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 203/442 (45%), Gaps = 46/442 (10%)
Query: 77 TPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVS 136
P + EV+K+L N+ +F++ HS + + + A +
Sbjct: 68 NPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFE 127
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE-HGCRQDLNSFNTILDVLCKT 195
M+S P R L +A GK H A + + E GC +NS +L+ L K
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNS---LLNTLVKL 184
Query: 196 KRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
RVE A LF C D+ ++NI+ G C + + AL++L M+ G P +VTY
Sbjct: 185 DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTY 244
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRK-CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
NTL++G+ + ++L +A E F ++K C DVVTYT+M+ G+ AG+++++ + D+M+
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 314 RAGLVPS-----------------------------------VATYNALIQVLCKKDCVQ 338
R G+ P+ V T+ +LI C+ V
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
++EEM +G PN TY+++I LC+ + +A E +G++ I P YN VI
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
FC AG++ + + E+M C P+ T+ +LI ++ + + A + +MV
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCK--PDKITFTILIIGHCMKGR---MFEAVSIFHKMV 479
Query: 459 DRGFLPRKFTFNRVLNGLALTG 480
G P K T + +L+ L G
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAG 501
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TYN L + + A + F MK D V+ + GF V+ +K K F
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKS-----DGVSPNNRLLGFLVSSFAEKGKLHF--- 156
Query: 313 VRAGLVPS------VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
A L+ S N+L+ L K D V++A+ +F+E + + T+N++IRGL
Sbjct: 157 ATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C G E+A+E +G M G P + TYN +I+ FC + E+ K MF+ + GS C P
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CSP 275
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
++ TY +IS K+ + A LL +M+ G P TFN +++G A G A+
Sbjct: 276 DVVTYTSMISGYC---KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 487 EI 488
EI
Sbjct: 333 EI 334
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 202/434 (46%), Gaps = 19/434 (4%)
Query: 60 SDPGTLAEALE---------NSPFRWTPELVDEVLKRLWNHG--PKALQFFKHLDRHPTY 108
S G + EA E SP +T + V+ L HG +A + F + R
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYT---YNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 109 IHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
S + + + A + D + S MRS P F+ + + +G +A+
Sbjct: 338 PDSTT-YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL-FKTFRGRFRCDSVSYNIIANGWC 227
F S+ E G D + ++ C+ + +A +L + + D V+YN I +G C
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
K A ++ EM ER + P T L+ G+ + L+ A E F +MK+++ +DVV
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
TY T++ GFG G++ +K ++ +MV ++P+ +Y+ L+ LC K + A V++EM
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
+ K P + N +I+G C SG+ ++ +M G P +YN +I F +
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
K + +KM + +P++ TYN ++ F R+ + A +L +M++RG P +
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHG-FCRQNQ--MKEAEVVLRKMIERGVNPDRS 693
Query: 468 TFNRVLNGLALTGN 481
T+ ++NG N
Sbjct: 694 TYTCMINGFVSQDN 707
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 198/443 (44%), Gaps = 28/443 (6%)
Query: 69 LENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRH-PTYIHSPSGFEHAIDIAARMRD 127
+ N R P V EVL R N +F L H P + H+ I I R
Sbjct: 69 VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGR 128
Query: 128 YTTAWTLVSRMRSLRR-------------------GPTPRAFAILAERYAAAGKPHRAVR 168
+ A + + RM +RR G F +L Y A K A
Sbjct: 129 LSDAQSCLLRM--IRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHE 186
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWC 227
F + G +++ N ++ L + VE+A +++ R + + NI+ N C
Sbjct: 187 AFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALC 246
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
+ L ++ E+G+ P +VTYNTL+ Y + EA+E M + V
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
TY T+++G G+ +++K VF EM+R+GL P TY +L+ CKK V VF +M
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
+ VP+L ++ ++ SG++++A+ Y +++ G+ P Y ++I+ +C G I
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
+++ +M C+ ++ TYN ++ + RK L A KL EM +R P +
Sbjct: 427 SVAMNLRNEMLQQGCAM--DVVTYNTILHGLCKRKM---LGEADKLFNEMTERALFPDSY 481
Query: 468 TFNRVLNGLALTGNQEFAKEILR 490
T +++G GN + A E+ +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQ 504
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 6/351 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
AW + + G I+ GK + + E G D+ ++NT++
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+E A L G+ F +YN + NG C + A +V EM G+SP
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
TY +LL + + E + F +M+ R D+V +++M+ F +G + K+ F
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+ + AGL+P Y LIQ C+K + A+ + EM+ +GC ++ TYN ++ GLC
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
+ A + M + + P T ++I C G ++ + +F+KM + ++
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL--DVV 516
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
TYN L+ K D+ A ++ +MV + LP +++ ++N L G
Sbjct: 517 TYNTLLDGF---GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 185/399 (46%), Gaps = 14/399 (3%)
Query: 99 FKHLDRHPTYIHSPSGFEH--AIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA--FAILA 154
F+ ++ P SP + + I+ + Y A + + M LR G +P + + L
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM--LRSGLSPDSTTYRSLL 347
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFR 213
G +VF M DL F++++ + ++ ++ A F + +
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
D+V Y I+ G+C +A+ + EM ++G + +VTYNT+L G + L EA +
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
F EM +R D T T ++ G G ++ + +F +M + V TYN L+ K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
+ A ++ +MV K +P +Y++++ LC G + A M I+P+V
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKL 453
N +I+ +C +G G S EKM S +P+ +YN LI FVR+ E++ A L
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMI--SEGFVPDCISYNTLIYG-FVRE--ENMSKAFGL 642
Query: 454 LIEMVDR--GFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+ +M + G +P FT+N +L+G + A+ +LR
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 40/312 (12%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + IL + Y G A+ + M + GC D+ ++NTIL LCK K + A L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 205 FK--TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
F T R F DS + I+ +G C + A+++ ++M E+ I +VTYNTLL G+
Sbjct: 468 FNEMTERALFP-DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ + A E + +M ++ ++Y+ +V+ G + ++ RV+DEM+ + P+V
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 323 TYNALIQVLCKK--------------------DCVQNALLVF----EEMVGK-------- 350
N++I+ C+ DC+ L++ EE + K
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 351 -----GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
G VP++ TYN ++ G C M+ A + +M + G+ P TY +I F
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Query: 406 EIEKGLSMFEKM 417
+ + + ++M
Sbjct: 707 NLTEAFRIHDEM 718
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 3/249 (1%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P IL + + G A+ +F M E R D+ ++NT+LD K ++ A +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 205 FKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ + +SY+I+ N C A +V EM + I PT++ N+++KGY R
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV--RAGLVPSV 321
+ F +M D ++Y T+++GF + K+ + +M + GLVP V
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
TYN+++ C+++ ++ A +V +M+ +G P+ +TY +I G ++ A
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 382 MEKHGIRPS 390
M + G P
Sbjct: 718 MLQRGFSPD 726
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ +D ++ D TA + + M S PTP +++IL + G A RV+ M
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTP 233
+ + N+++ C++ S K F D +SYN + G+ +
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 234 MALQVLKEMAER--GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
A ++K+M E G+ P + TYN++L G+ R +Q++EA +M +R D TYT
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPS 320
M++GF + ++ R+ DEM++ G P
Sbjct: 698 MINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
+ ++ LI+ + ++ A F + KG +++ N +I L G +E A
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
+ + G+ +V T N+++ C G++EK + ++ + P++ TYN LISA +
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV--YPDIVTYNTLISAYSSK 283
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
E+ A +L+ M +GF P +T+N V+NGL G E AKE+ R G
Sbjct: 284 GLMEE---AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 156/320 (48%), Gaps = 8/320 (2%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A + + +M L P F L + + A+ + M E G + D+ + TI+D
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LCK V A SLF R D V Y + NG C R A +L+ M +R I P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++T+N L+ + + + +A E + EM + ++ TYT++++GF + G V +++++F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
M G P V Y +LI CK V +A+ +F EM KG N TY +I+G
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG----DGSCSCL 425
G A E M G+ P+++TYNV++ C G+++K L +FE M DG
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA--- 422
Query: 426 PNLDTYNVLISAMFVRKKSE 445
PN+ TYNVL+ + K E
Sbjct: 423 PNIWTYNVLLHGLCYNGKLE 442
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 165/325 (50%), Gaps = 6/325 (1%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID + A +L +M + P + L +G+ A + M +
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+ D+ +FN ++D K + A L+ + R + +Y + NG+C+ A Q
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+ M +G P +V Y +L+ G+ +C ++ +A + F EM ++ + +TYTT++ GFG
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK---GCVP 354
G+ ++ VF MV G+ P++ TYN L+ LC V+ AL++FE+M + G P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N+ TYNV++ GLC++G +E+A+ M K + + TY ++I+ C AG+++ +++F
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMF 439
+ PN+ TY +IS +F
Sbjct: 484 CSLPSKGVK--PNVVTYTTMISGLF 506
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 186/406 (45%), Gaps = 8/406 (1%)
Query: 86 KRLWNHGPKALQFFKHLDRHPTYIHS---PS--GFEHAIDIAARMRDYTTAWTLVSRMRS 140
+ + +G +LQF + LD + S PS F +++ A+M+ + L ++
Sbjct: 41 REILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQI 100
Query: 141 LRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
+ +L + + +P+ A M + G D+ +F ++++ C R+E
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 201 AHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A S+ + + D V Y I + C AL + +M GI P +V Y +L+
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
G + R+A M KRK + DV+T+ ++ F G+ ++ +++EM+R + P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
++ TY +LI C + CV A +F M KGC P++ Y +I G C ++ A++
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMF 439
M + G+ + TY +I+ F G+ +F M S PN+ TYNVL+ +
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV--SRGVPPNIRTYNVLLHCLC 398
Query: 440 VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
K + ++ + + + G P +T+N +L+GL G E A
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 152/333 (45%), Gaps = 7/333 (2%)
Query: 164 HRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNII 222
+ A+ +F M E + F +L+V+ K K+ ++ +L + D + N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 223 ANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKC 282
N +C + +A L +M + G P +VT+ +L+ G+ +++ EA +M +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 283 EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL 342
+ DVV YTT++ G V + +FD+M G+ P V Y +L+ LC ++A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+ M + P++ T+N +I G A E M + I P++ TY +I FC
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
G +++ MF M + C P++ Y LI+ KK +D A K+ EM +G
Sbjct: 294 MEGCVDEARQMFYLM--ETKGCFPDVVAYTSLINGFCKCKKVDD---AMKIFYEMSQKGL 348
Query: 463 LPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSR 494
T+ ++ G G A+E+ M SR
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 141/312 (45%), Gaps = 37/312 (11%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID + + A L + M + P + L + G A ++F M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM 234
GC D+ ++ ++++ CK K+V+
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVD----------------------------------D 335
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A+++ EM+++G++ +TY TL++G+ + + A E F M R ++ TY ++H
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 295 GFGVAGEVKKSKRVFDEMVR---AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
G+VKK+ +F++M + G+ P++ TYN L+ LC ++ AL+VFE+M +
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
+ TY ++I+G+C +G ++ AV + G++P+V TY +I G +
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Query: 412 SMFEKMGDGSCS 423
+F KM + S
Sbjct: 516 VLFRKMKEDGVS 527
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 12/349 (3%)
Query: 146 TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF 205
TPR F L + +A K A F+ M ++G + S N + L RV++A +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 206 KTFRGRFRC----DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+ R RC + + N++ +G+C + +++L++M G T V+YNTL+ G+
Sbjct: 227 REMR---RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
L A + M K + +VVT+ T++HGF A +++++ +VF EM + P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
TYN LI ++ + A +E+MV G ++ TYN +I GLC +A +++
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
++K + P+ T++ +I C ++G +++ M C PN T+N+L+SA F R
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH--PNEQTFNMLVSA-FCR 460
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+ED A ++L EMV R T ++V NGL G + K++L+
Sbjct: 461 --NEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQ 507
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 171/359 (47%), Gaps = 6/359 (1%)
Query: 111 SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVF 170
+P F+ A ++ + A +M+ PT + G+ A+R +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLI 229
M + + N ++ C++ +++ L + R FR VSYN + G C
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
AL++ M + G+ P +VT+NTL+ G+ R +L+EA + F EMK + VTY
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
T+++G+ G+ + + R +++MV G+ + TYNALI LCK+ + A +E+
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
+ VPN +T++ +I G C + +R E M + G P+ QT+N+++ FC + +
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 410 GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
+ +M S +P LD+ V ++ + +D +V KLL EM + FL F
Sbjct: 467 ASQVLREMVRRS---IP-LDSRTVHQVCNGLKHQGKDQLVK-KLLQEMEGKKFLQESFN 520
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
R+C+ + ++ F + + + F +M G +P+V + NA + L + V
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
AL + EM PN T N+V+ G C SG +++ +E + ME+ G R + +YN +I
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 400 YFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD 459
C+ G + L + MG PN+ T+N LI F R + L A K+ EM
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQ--PNVVTFNTLIHG-FCR--AMKLQEASKVFGEMKA 336
Query: 460 RGFLPRKFTFNRVLNGLALTGNQEFA 485
P T+N ++NG + G+ E A
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMA 362
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 12/349 (3%)
Query: 146 TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF 205
TPR F L + +A K A F+ M ++G + S N + L RV++A +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 206 KTFRGRFRC----DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+ R RC + + N++ +G+C + +++L++M G T V+YNTL+ G+
Sbjct: 227 REMR---RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
L A + M K + +VVT+ T++HGF A +++++ +VF EM + P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
TYN LI ++ + A +E+MV G ++ TYN +I GLC +A +++
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
++K + P+ T++ +I C ++G +++ M C PN T+N+L+SA F R
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH--PNEQTFNMLVSA-FCR 460
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+ED A ++L EMV R T ++V NGL G + K++L+
Sbjct: 461 --NEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQ 507
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 171/359 (47%), Gaps = 6/359 (1%)
Query: 111 SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVF 170
+P F+ A ++ + A +M+ PT + G+ A+R +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLI 229
M + + N ++ C++ +++ L + R FR VSYN + G C
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
AL++ M + G+ P +VT+NTL+ G+ R +L+EA + F EMK + VTY
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
T+++G+ G+ + + R +++MV G+ + TYNALI LCK+ + A +E+
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
+ VPN +T++ +I G C + +R E M + G P+ QT+N+++ FC + +
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 410 GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
+ +M S +P LD+ V ++ + +D +V KLL EM + FL F
Sbjct: 467 ASQVLREMVRRS---IP-LDSRTVHQVCNGLKHQGKDQLVK-KLLQEMEGKKFLQESFN 520
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
R+C+ + ++ F + + + F +M G +P+V + NA + L + V
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
AL + EM PN T N+V+ G C SG +++ +E + ME+ G R + +YN +I
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 400 YFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD 459
C+ G + L + MG PN+ T+N LI F R + L A K+ EM
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQ--PNVVTFNTLIHG-FCR--AMKLQEASKVFGEMKA 336
Query: 460 RGFLPRKFTFNRVLNGLALTGNQEFA 485
P T+N ++NG + G+ E A
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMA 362
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 176/367 (47%), Gaps = 9/367 (2%)
Query: 74 FRWTPELV-DEVLK--RLWNHGPKALQFFKHL--DRHPTYIHSPSGFEHAIDIAARMRDY 128
F+W+ + +V+K R K++ F + Y+H S F + + +
Sbjct: 8 FKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKF 67
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
A L+ RM+ + + Y +P ++RVF M + C ++ T+
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTV 127
Query: 189 LDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMA-LQVLKEMAERG 246
L +L + ++ +A +K R +V S N++ C T A L++ EM +RG
Sbjct: 128 LAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 187
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
P TY TL+ G R ++ EA + F EM ++ C VVTYT++++G + V ++
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
R +EM G+ P+V TY++L+ LCK A+ +FE M+ +GC PN+ TY +I GL
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C ++ AVE + RM G++P Y VI FC + + + ++M G + P
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT--P 365
Query: 427 NLDTYNV 433
N T+N+
Sbjct: 366 NRLTWNI 372
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 25/275 (9%)
Query: 237 QVLKEM-AERGISPTMVTYNTLLKGY------------------FRCHQLREAWEFFLEM 277
QV+K M AE+ + +M +++ Y ++ + A + + M
Sbjct: 18 QVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRM 77
Query: 278 KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCV 337
K C + ++ G+G S RVF +M PS Y ++ +L +++ +
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQL 137
Query: 338 QNALLVFEEMVGKGCVPNLNTYNVVIRGLC-HSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
A ++ M G P + + NV+I+ LC + G ++ ++ M K G P TY
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
+I C G I++ +F +M + C+ P + TY LI+ + K ++ A + L E
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCA--PTVVTYTSLINGLCGSKNVDE---AMRYLEE 252
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
M +G P FT++ +++GL G A E+ M
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
++ A + M+S P ++ L + G+ +A+ +F M GCR ++ ++
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300
Query: 186 NTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
T++ LCK ++++ A L + + D+ Y + +G+C I + A L EM
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360
Query: 245 RGISPTMVTYNT-------LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
GI+P +T+N +++G + R A+ +L M+ R ++V T ++V
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLCANYPSR-AFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
GE +K+ ++ DE+V G +PS T+ LI
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 185/388 (47%), Gaps = 16/388 (4%)
Query: 122 AARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQD 181
A MR+ L+ M+SL+ P + L + G A ++ M G + +
Sbjct: 323 AGSMRE---GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFRGR--FRCDSVSYNIIANGWCLIKRTPMALQVL 239
+ N L LCK ++ E K F D V+Y+ + + + AL+++
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+EM ++GI +T NT+L + +L EA KR +D VTY T++ GF
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
+V+K+ ++DEM + + P+V+T+N+LI LC + A+ F+E+ G +P+ +T+
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
N +I G C G +E+A E+ KH +P T N+++ C G EK L+ F + +
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 420 GSCSCLPNLD--TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA 477
+D TYN +ISA KK L A LL EM ++G P +FT+N ++ L
Sbjct: 620 ER-----EVDTVTYNTMISAFCKDKK---LKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671
Query: 478 LTGNQEFAKEIL-RMQSRCGHALRHLKL 504
G E+L + + G R L++
Sbjct: 672 EDGKLSETDELLKKFSGKFGSMKRDLQV 699
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 168/337 (49%), Gaps = 9/337 (2%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK---TKRVEMA 201
P+ F I Y GKPH A+++F M + +L + NT+L L + + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 202 HSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEM-AERGISPTMVTYNTLLK 259
+F + + ++N++ NG+CL + AL +L+ M +E ++P VTYNT+LK
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
+ +L + E L+MKK + VTY +V+G+ G +K++ ++ + M + ++P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
+ TYN LI LC ++ L + + M P++ TYN +I G G A + M
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMF 439
+ME G++ + T+N+ +++ C + E +++ D P++ TY+ LI A
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH-GFSPDIVTYHTLIKAYL 427
Query: 440 VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
K DL A +++ EM +G T N +L+ L
Sbjct: 428 ---KVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 31/389 (7%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
+++++ ++ M LR P+ A + L E GK A+ + + + G +L
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 184 SFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
+N ++D LCK ++ A LF + + R + V+Y+I+ + +C + AL L EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
+ G+ ++ YN+L+ G+ + + A F EM +K E VVTYT+++ G+ G++
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
K+ R++ EM G+ PS+ T+ L+ L + +++A+ +F EM PN TYNV+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSC 422
I G C GDM +A E++ M + GI P +Y +I C G+ + + + G+C
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 423 S----CLPN----------LDTYNVLISAMFVRKKSEDLVVAG----------------K 452
C L+ + M R DLV G
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
LL EM DRG P + +++ + TG+
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 169/400 (42%), Gaps = 41/400 (10%)
Query: 123 ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDL 182
+ R + A L + M S+ P + + RA + M GC ++
Sbjct: 203 VKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNI 262
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKE 241
+N ++D LCK ++V A + K G+ + D V+Y + G C ++ + L+++ E
Sbjct: 263 VPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 242 M-----------------------------------AERGISPTMVTYNTLLKGYFRCHQ 266
M + G+SP + YN L+ + +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
EA F M K + VTY+ ++ F G++ + EMV GL SV YN+
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
LI CK + A EM+ K P + TY ++ G C G + +A+ M G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
I PS+ T+ ++ AG I + +F +M + + PN TYNV+I + D
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK--PNRVTYNVMIEGYC---EEGD 557
Query: 447 LVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
+ A + L EM ++G +P +++ +++GL LTG AK
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 166/373 (44%), Gaps = 8/373 (2%)
Query: 111 SPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
SP+ F + ID + R + A L RM + P ++IL + + GK A+
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWC 227
M + G + + +N++++ CK + A + + V+Y + G+C
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
+ AL++ EM +GI+P++ T+ TLL G FR +R+A + F EM + + + V
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
TY M+ G+ G++ K+ EM G+VP +Y LI LC A + + +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
C N Y ++ G C G +E A+ M + G+ + Y V+I +
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
+ + ++M D P+ Y +I A + K+ D A + M++ G +P +
Sbjct: 664 KLFFGLLKEMHDRGLK--PDDVIYTSMIDA---KSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 468 TFNRVLNGLALTG 480
T+ V+NGL G
Sbjct: 719 TYTAVINGLCKAG 731
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 159/383 (41%), Gaps = 44/383 (11%)
Query: 122 AARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQD 181
A +RD A L + M P + ++ E Y G +A M E G D
Sbjct: 520 AGLIRD---AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLK 240
S+ ++ LC T + A +G + + Y + +G+C + AL V +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
EM +RG+ +V Y L+ G + + + EM R + D V YT+M+ G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM------------- 347
+ K++ ++D M+ G VP+ TY A+I LCK V A ++ +M
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 348 ----------------------VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
+ KG + N TYN++IRG C G +E A E + RM
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD 816
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
G+ P TY +I C +++K + ++ M + P+ YN LI V +
Sbjct: 817 GVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR--PDRVAYNTLIHGCCV---AG 871
Query: 446 DLVVAGKLLIEMVDRGFLPRKFT 468
++ A +L EM+ +G +P T
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKT 894
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 178/421 (42%), Gaps = 28/421 (6%)
Query: 81 VDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRS 140
V+E+L + L+FF L H + HS + F I + + A +L+ +
Sbjct: 73 VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132
Query: 141 LRRGPTP-----------------RAFAILAERYAAAGKPHRAVRVFISM-HEHGCRQDL 182
P+ +F +L + Y + + V VF M + ++
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEV 192
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKE 241
+ + +L L K + +A LF R D Y + C +K A +++
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M G +V YN L+ G + ++ EA ++ + + DVVTY T+V+G E
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+ + DEM+ PS A ++L++ L K+ ++ AL + + +V G PNL YN
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I LC A RM K G+RP+ TY+++I FC G+++ LS +M D
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 422 --CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
S P YN LI+ K D+ A + EM+++ P T+ ++ G
Sbjct: 433 LKLSVYP----YNSLING---HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 480 G 480
G
Sbjct: 486 G 486
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 44/245 (17%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID + + +D + L+ M P + + + + G A ++ M GC
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 179 RQDLNSFNTILDVLCKT----------------------------------------KRV 198
+ ++ +++ LCK K V
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 199 EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
E+ +++ K ++ +YN++ G+C R A +++ M G+SP +TY T++
Sbjct: 774 ELHNAILKGLLA----NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
R + +++A E + M ++ D V Y T++HG VAGE+ K+ + +EM+R GL+
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Query: 319 PSVAT 323
P+ T
Sbjct: 890 PNNKT 894
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 165/361 (45%), Gaps = 39/361 (10%)
Query: 136 SRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT 195
S+M+ R P R+ L R+A GK R F M G R + ++N ++D +CK
Sbjct: 216 SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKE 275
Query: 196 KRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
VE A LF+ EM RG+ P VTYN
Sbjct: 276 GDVEAARGLFE----------------------------------EMKFRGLVPDTVTYN 301
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
+++ G+ + +L + FF EMK CE DV+TY +++ F G++ + EM
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
GL P+V +Y+ L+ CK+ +Q A+ + +M G VPN TY +I C G++ A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
M + G+ +V TY +I CDA +++ +F KM + +PNL +YN LI
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD--TAGVIPNLASYNALI 479
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
FV+ K+ D A +LL E+ RG P + + GL E AK ++ C
Sbjct: 480 HG-FVKAKNMDR--ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 496 G 496
G
Sbjct: 537 G 537
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 148/346 (42%), Gaps = 5/346 (1%)
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTK 196
M+ + P + L + GK + + M +G + ++ S++T++D CK
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 197 RVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
++ A + R + +Y + + C I A ++ EM + G+ +VTY
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
L+ G +++EA E F +M ++ +Y ++HGF A + ++ + +E+
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
G+ P + Y I LC + ++ A +V EM G N Y ++ SG+
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
+ + M++ I +V T+ V+I C + K + F ++ + N + +I
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN-DFGLQANAAIFTAMI 620
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
+ K + A L +MV +G +P + + +++G GN
Sbjct: 621 DGLC---KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 146/357 (40%), Gaps = 38/357 (10%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
+A++F+ + R + + + ID ++ + + A+ L + M + + L
Sbjct: 385 QAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-F 212
+ A + A +F M G +L S+N ++ K K ++ A L +GR
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
+ D + Y G C +++ A V+ EM E GI + Y TL+ YF+ E
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 273 FFLEMKKRKCEIDVVTY------------------------------------TTMVHGF 296
EMK+ E+ VVT+ T M+ G
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
+V+ + +F++MV+ GLVP Y +L+ K+ V AL + ++M G +L
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
Y ++ GL H +++A ++ M GI P V++ + G I++ + +
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 187/411 (45%), Gaps = 7/411 (1%)
Query: 80 LVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMR 139
LV ++L R + AL K + + HS ++ A+DI + + + V RMR
Sbjct: 89 LVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMR 148
Query: 140 SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
+ T A + R+A AG+ AV +F + E G ++ S N +LD LCK KRVE
Sbjct: 149 G-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 200 MAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A + + ++ ++NI +GWC R AL ++EM G P +++Y T+++
Sbjct: 208 QARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
Y + + + +E EM+ + +TYTT++ E +++ RV M R+G P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 320 SVATYNALIQVLCKKDCVQNALLVFE-EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
YN LI L + ++ A VF EM G N +TYN +I CH + ++A+E
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 387
Query: 379 MGRMEKHGI-RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISA 437
+ ME + P V TY ++R G++ + + ++M L TY LI
Sbjct: 388 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE-STYTFLIQR 446
Query: 438 MFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ E A L EM+ + PR T +L + E A+ I
Sbjct: 447 LCRANMCE---WAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 187/411 (45%), Gaps = 7/411 (1%)
Query: 80 LVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMR 139
LV ++L R + AL K + + HS ++ A+DI + + + V RMR
Sbjct: 89 LVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMR 148
Query: 140 SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
+ T A + R+A AG+ AV +F + E G ++ S N +LD LCK KRVE
Sbjct: 149 G-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 200 MAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A + + ++ ++NI +GWC R AL ++EM G P +++Y T+++
Sbjct: 208 QARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
Y + + + +E EM+ + +TYTT++ E +++ RV M R+G P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 320 SVATYNALIQVLCKKDCVQNALLVFE-EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
YN LI L + ++ A VF EM G N +TYN +I CH + ++A+E
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 387
Query: 379 MGRMEKHGI-RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISA 437
+ ME + P V TY ++R G++ + + ++M L TY LI
Sbjct: 388 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE-STYTFLIQR 446
Query: 438 MFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ E A L EM+ + PR T +L + E A+ I
Sbjct: 447 LCRANMCE---WAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 174/364 (47%), Gaps = 11/364 (3%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID + R A L + M + P + L G+ A R+ +M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E ++ +FN ++D K ++ A L + R D+++YN++ NG+C+ R
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A Q+ K M + P + TYNTL+ G+ +C ++ + E F EM +R + VTYTT++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
GF AG+ ++ VF +MV + + TY+ L+ LC + AL++F+ +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
N+ YN +I G+C +G + A + + I+P V TYN +I C +++ +
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 414 FEKMG-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
F KM DG+ LPN TYN LI A + D + +L+ EM GF+ T + V
Sbjct: 558 FRKMKEDGT---LPNSGTYNTLIRANL---RDCDRAASAELIKEMRSSGFVGDASTISLV 611
Query: 473 LNGL 476
N L
Sbjct: 612 TNML 615
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 170/359 (47%), Gaps = 18/359 (5%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV +M + P F L K AV + M + GC+ DL ++ T+
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 189 LDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ LCK +++A +L R + + V +N I + C + +A+ + EM +GI
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P +VTYN+L+ + +A M ++K +VVT+ ++ F G++ ++++
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ +EM++ + P TYN LI C + + A +F+ MV K C+PN+ TYN +I G C
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+E VE M + G+ + TY +I+ F AG+ + +F++M +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP--TD 467
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK------FTFNRVLNGLALTG 480
+ TY++L+ L GKL +V +L + F +N ++ G+ G
Sbjct: 468 IMTYSILLHG---------LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 178/367 (48%), Gaps = 6/367 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M R P+ F L A K + + M G DL +++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 191 VLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ ++ +A + L K + + D V+ + + NG+C KR A+ ++ +M E G P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
T+ TL+ G F ++ EA +M +R C+ D+VTY T+V+G G++ + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
++M A + +V +N +I LCK V+ A+ +F EM KG PN+ TYN +I LC+
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G A + M + I P+V T+N +I F G++ + + E+M S P+
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID--PDTI 364
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TYN+LI+ + + ++ A ++ MV + LP T+N ++NG E E+
Sbjct: 365 TYNLLINGFCMHNRLDE---AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 490 RMQSRCG 496
R S+ G
Sbjct: 422 REMSQRG 428
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 34/317 (10%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
++ A L+S M + P F L + + GK A ++ M + D ++N
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERG 246
+++ C R++ A +FK + ++ +YN + NG+C KR +++ +EM++RG
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
+ VTY T+++G+F+ A F +M + D++TY+ ++HG G++ +
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 307 RVF-------------------DEMVRAGLV-------------PSVATYNALIQVLCKK 334
+F + M +AG V P V TYN +I LC K
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSK 548
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
+Q A +F +M G +PN TYN +IR D + E + M G T
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI 608
Query: 395 NVVIRYFCDAGEIEKGL 411
++V D G ++K
Sbjct: 609 SLVTNMLHD-GRLDKSF 624
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 142/356 (39%), Gaps = 81/356 (22%)
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG---- 260
F + G +R I+ N I + A+ + +M + P++V +N LL
Sbjct: 43 FASASGDYR------EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM 96
Query: 261 -------------------------------YFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
+ R QL A +M K E D+VT
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
+++++G+ + + + + D+MV G P T+ LI L + A+ + ++MV
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 350 KGCVPNLNTYNVVIRGLCHSGDM-----------------------------------ER 374
+GC P+L TY V+ GLC GD+ E
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
AV+ ME GIRP+V TYN +I C+ G + M + + PN+ T+N L
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN--PNVVTFNAL 334
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
I A F K LV A KL EM+ R P T+N ++NG + + AK++ +
Sbjct: 335 IDAFF---KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 194/385 (50%), Gaps = 20/385 (5%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM-RSLRRGPTPR 148
N KAL+FF ++R + H+ F IDI + ++ +W L++RM + P
Sbjct: 59 NDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHV 118
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF--K 206
F I+ +RY A A+ + + + R D SF ++D LC+ K V A L K
Sbjct: 119 TFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGK 177
Query: 207 TFRGR-FRCDSVS-YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
G F + +N+I GW + + K+M G++ + +Y+ + +
Sbjct: 178 NVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKS 237
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+ +A + + EMK R+ ++DVV Y T++ G + V+ RVF EM G P+VAT+
Sbjct: 238 GKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM---GR 381
N +I++LC+ +++A + +EM +GC P+ TY +C +E+ E + GR
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGR 351
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M + G+RP + TY +++R F G ++ L +++ M + + P+ YN +I A+ ++
Sbjct: 352 MIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDT--PDSAAYNAVIDAL-IQ 408
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRK 466
K D+ A + EM++RG PR+
Sbjct: 409 KGMLDM--AREYEEEMIERGLSPRR 431
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 195/416 (46%), Gaps = 14/416 (3%)
Query: 83 EVLKRLWNHG--PKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRS 140
+V+KRL P AL FFK + + H+P FE I A + L+ +M+
Sbjct: 45 DVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL 104
Query: 141 LRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
+ F + Y G RAV +F + E GC + +N +LD L R++M
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 201 AHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
+ +++ R F + +YN++ C + A ++L EM+ +G P V+Y T++
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
++E E + E V Y +++G + K + + EMV G+ P
Sbjct: 225 SMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
+V +Y+ LI VLC ++ A +M+ +GC PN+ T + +++G G A++
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW 339
Query: 380 GRMEK-HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+M + G++P+V YN +++ FC G I K +S+F M + CS PN+ TY LI+
Sbjct: 340 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS--PNIRTYGSLING- 396
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSR 494
F ++ S D V + +M+ G P + ++ L + A+ ++ + S+
Sbjct: 397 FAKRGSLDGAVY--IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 169/404 (41%), Gaps = 41/404 (10%)
Query: 113 SGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFIS 172
S + I+ + DY A+ L+ M P +++ L +G+ A
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 173 MHEHGCRQDLNSFNTILD-VLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIK 230
M + GC ++ + ++++ + + + RG + + V+YN + G+C
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 231 RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYT 290
A+ V M E G SP + TY +L+ G+ + L A + +M C +VV YT
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK 350
MV + K+++ + + M + PSV T+NA I+ LC + A VF +M +
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 351 G-CVPNL-----------------------------------NTYNVVIRGLCHSGDMER 374
C PN+ +TYN ++ G C++G
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
A++ +G+M G P T N++I +C G+ E+ M + + G P++ +Y +
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNV 606
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
I + ED V+ LL M+ G +P T++ ++N L
Sbjct: 607 IWGLCRSNCREDGVI---LLERMISAGIVPSIATWSVLINCFIL 647
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM- 173
+ + ++ R + A +L+ M P+ F + AG+ A +VF M
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLIKRT 232
+H C ++ ++N +LD L K R+E A+ L + F S +YN + +G C
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF--LEMKKRKCEIDVVTYT 290
+ALQ++ +M G SP +T N ++ Y + + A + + +RK DV++YT
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYT 604
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
++ G + + + + M+ AG+VPS+AT++ LI D V+
Sbjct: 605 NVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVR 652
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 184/391 (47%), Gaps = 22/391 (5%)
Query: 103 DRHPTYIHSPSGFEHAIDIAA--------------RMRDYTTAWTLVSRMRSLRRGPTPR 148
D +P ++ S F+ A+D + R R++ A++ +M
Sbjct: 49 DSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFV 108
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+ + L E Y K A V M + G ++ + N +L LC+ A SL +
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 209 R-GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
R D SYN + G+C K AL++ EM G S ++VT+ L+ + + ++
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
EA F EMK E D+V YT+++ GF GE+ + K +FDE++ G P TYN L
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
I+ CK ++ A +FE M+ +G PN+ TY +I GLC G + A++ + M +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
P+ TYN++I C G + + + E M P+ TYN+L+ + + DL
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR--PDNITYNILLGGLCAKG---DL 403
Query: 448 VVAGKLLIEMV-DRGFL-PRKFTFNRVLNGL 476
A KLL M+ D + P ++N +++GL
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 197/414 (47%), Gaps = 14/414 (3%)
Query: 85 LKRLWNHGPKALQFFKHLDRHPTYIH--SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLR 142
L R NH A F++ + T+I+ S SG ++ +MR A+ +++ M L+
Sbjct: 82 LVRSRNH-ELAFSFYRKMLETDTFINFVSLSGL---LECYVQMRKTGFAFGVLALM--LK 135
Query: 143 RGPTPRAFA--ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
RG + IL + + +AV + M + D+ S+NT++ C+ K +E
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 201 AHSLFKTFRGRFRCDS-VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A L +G S V++ I+ + +C + A+ LKEM G+ +V Y +L++
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
G+ C +L F E+ +R +TY T++ GF G++K++ +F+ M+ G+ P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
+V TY LI LC + AL + M+ K PN TYN++I LC G + AVE +
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMF 439
M+K RP TYN+++ C G++++ + M S P++ +YN LI +
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 440 VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQS 493
+ + LL+E + G + T N +LN G+ A E+ + S
Sbjct: 436 KENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 184/437 (42%), Gaps = 79/437 (18%)
Query: 135 VSRMRSLRRG---PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
VS +R +RR P ++ + + + +A+ + M GC L ++ ++D
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221
Query: 192 LCKTKRVEMAHSLFK--TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
CK +++ A K F G D V Y + G+C + E+ ERG SP
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMG-LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+TYNTL++G+ + QL+EA E F M +R +V TYT ++ G G+ K++ ++
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+ M+ P+ TYN +I LCK V +A+ + E M + P+ TYN+++ GLC
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 370 GDMERAVEYMGRMEKHG--IRPSVQTYNVVIRYFCD------------------------ 403
GD++ A + + M K P V +YN +I C
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 404 -----------AGEIEKGLSMFEK---------------MGDGSCSC------------- 424
AG++ K + ++++ M DG C
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 425 -----LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
P++ YN L+S++ K L A +L EM P +FN +++G
Sbjct: 521 RVSELQPSVFDYNCLLSSLC---KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 480 GNQEFAKEILRMQSRCG 496
G+ + A+ +L SR G
Sbjct: 578 GDIKSAESLLVGMSRAG 594
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 168/365 (46%), Gaps = 9/365 (2%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L++ M P + I+ + G AV + M + R D ++N +L
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 191 VLCKTKRVEMAHSLFKTF---RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
LC ++ A L D +SYN + +G C R AL + + E+
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+ VT N LL + + +A E + ++ K + TYT M+ GF G + +K
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ +M + L PSV YN L+ LCK+ + A +FEEM P++ ++N++I G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+GD++ A + M + G+ P + TY+ +I F G +++ +S F+KM D P+
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE--PD 633
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA-LTGNQEFAK 486
+ ++ + +++ L +L+ ++VD+ + K V++ + + N + AK
Sbjct: 634 AHICDSVLKYCISQGETDKLT---ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAK 690
Query: 487 EILRM 491
+LR+
Sbjct: 691 RLLRV 695
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 172/354 (48%), Gaps = 23/354 (6%)
Query: 159 AAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSV 217
+AGK +A V M G D ++++ +L+ LC ++E+A LF+ RG D
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 218 SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM 277
+Y I+ + +C A + EM E G +P +VTY L+ Y + ++ A E F M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 278 KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP----------------SV 321
C ++VTY+ ++ G AG+V+K+ ++F+ M + VP +V
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
TY AL+ CK V+ A + + M +GC PN Y+ +I GLC G ++ A E
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M +HG ++ TY+ +I + + + KM + SC+ PN+ Y +I +
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA--PNVVIYTEMIDGLCKV 757
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSR 494
K+++ A KL+ M ++G P T+ +++G + G E E+L RM S+
Sbjct: 758 GKTDE---AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 50/422 (11%)
Query: 113 SGFEHAIDIAARMR---------DYTTAWTLVSRMRSLRRG-------------PTPRAF 150
S FE A+D RMR Y+T + L R P+P+ F
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 151 AILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR------VEMAHSL 204
L Y +G A ++ M + G +N ++ +C K +++A
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 205 F-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ + + ++ + C + A V++EM +G P TY+ +L
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
++ A+ F EMK+ DV TYT MV F AG ++++++ F+EM G P+V T
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM- 382
Y ALI K V A +FE M+ +GC+PN+ TY+ +I G C +G +E+A + RM
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 383 ---------------EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+ + RP+V TY ++ FC + +E+ + + M C PN
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE--PN 673
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
Y+ LI + K ++ A ++ EM + GF +T++ +++ Q+ A +
Sbjct: 674 QIVYDALIDGLCKVGKLDE---AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 488 IL 489
+L
Sbjct: 731 VL 732
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 175/399 (43%), Gaps = 28/399 (7%)
Query: 108 YIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAV 167
+I S + ++ A+ L M+ + I+ + + AG +A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 168 RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANG 225
+ F M E GC ++ ++ ++ K K+V A+ LF+T C + V+Y+ + +G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDG 597
Query: 226 WCLIKRTPMALQVLKEMA----------------ERGISPTMVTYNTLLKGYFRCHQLRE 269
C + A Q+ + M + P +VTY LL G+ + H++ E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A + M CE + + Y ++ G G++ +++ V EM G ++ TY++LI
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
K A V +M+ C PN+ Y +I GLC G + A + M ME+ G +P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
+V TY +I F G+IE L + E+MG + PN TY VLI K+ L V
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA--PNYVTYRVLIDHCC---KNGALDV 832
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
A LL EM + + +V+ G N+EF + +
Sbjct: 833 AHNLLEEMKQTHWPTHTAGYRKVIEGF----NKEFIESL 867
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 183/497 (36%), Gaps = 84/497 (16%)
Query: 75 RWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTL 134
+ + LV EVL RL + FF R Y H+ + +D+ R D
Sbjct: 129 KLSESLVIEVL-RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEF 187
Query: 135 VSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK 194
+ ++R + +L ++ G A+ + + R +++N ++ K
Sbjct: 188 LQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLK 247
Query: 195 TKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVT 253
R++ A + + R D + A C + + AL +++ P V
Sbjct: 248 ADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVF 304
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT---------------------- 291
Y L+ G EA +F M+ C +VVTY+T
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 292 -------------MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC-KKDCV 337
+VH + +G+ + ++ +MV+ G +P YN LI +C KD +
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 338 QNALL-----VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
LL + EM+ G V N + R LC +G E+A + M G P
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGS------------------------------- 421
TY+ V+ Y C+A ++E +FE+M G
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 422 --CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
C PN+ TY LI A KK + A +L M+ G LP T++ +++G
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKK---VSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 480 GNQEFAKEILRMQSRCG 496
G E A +I + CG
Sbjct: 602 GQVEKACQIF--ERMCG 616
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 5/304 (1%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
++ ID ++ A + + M T ++ L +RY + A +V M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E+ C ++ + ++D LCK + + A+ L + + + + V+Y + +G+ +I +
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
L++L+ M +G++P VTY L+ + L A EMK+ Y ++
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV--GKG 351
GF E +S + DE+ + P ++ Y LI L K ++ AL + EE+
Sbjct: 857 EGFN--KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
V +TYN +I LC + +E A + M K G+ P +Q++ +I+ +I + L
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 412 SMFE 415
+ +
Sbjct: 975 LLLD 978
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR----GLCHSGDMER 374
PS +TYN LIQ K D + +A L+ EM + NL +R LC G
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRCFAYSLCKVGKWRE 288
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
A + +E P Y +I C+A E+ + +M + SCLPN+ TY+ L
Sbjct: 289 A---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR--ATSCLPNVVTYSTL 343
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSR 494
+ +K+ L ++L M+ G P FN +++ +G+ +A ++L+ +
Sbjct: 344 LCGCLNKKQ---LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Query: 495 CGH 497
CGH
Sbjct: 401 CGH 403
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 179/398 (44%), Gaps = 41/398 (10%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV +M + P F L K AV + M + GC+ +L ++ +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 189 LDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ LCK +++A +L K + + V Y+ + + C + AL + EM +G+
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P ++TY++L+ + +A +M +RK +VVT+ ++ F G++ ++++
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
++DEM++ + P + TY++LI C D + A +FE M+ K C PN+ TYN +I G C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 368 HSGDMERAVEYMGRMEK-----------------------------------HGIRPSVQ 392
+ ++ VE M + G+ P++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TYN ++ C G++EK + +FE + P + TYN++I M K ED
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKME--PTIYTYNIMIEGMCKAGKVED---GWD 526
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
L + +G P +N +++G G +E A + R
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 150/304 (49%), Gaps = 1/304 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + R A L + M + P ++ L + A R+ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E ++ +FN ++D K ++ A L+ R D +Y+ + NG+C+ R
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A + + M + P +VTYNTL+ G+ + ++ E E F EM +R + VTYTT++
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
HGF A + ++ VF +MV G+ P++ TYN L+ LCK ++ A++VFE +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P + TYN++I G+C +G +E + + G++P V YN +I FC G E+ ++
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 414 FEKM 417
F KM
Sbjct: 563 FRKM 566
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 170/386 (44%), Gaps = 6/386 (1%)
Query: 110 HSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
H+ + I+ R + A L+ +M L P+ + L Y + AV +
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCL 228
M E G R D +F T++ L + A +L R + + V+Y ++ NG C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+A +L +M I +V Y+T++ + +A F EM+ + +V+T
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y++++ + R+ +M+ + P+V T+NALI K+ + A +++EM+
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
+ P++ TY+ +I G C ++ A M P+V TYN +I FC A I+
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 409 KGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
+G+ +F +M + N TY LI F ++ D A + +MV G P T
Sbjct: 418 EGVELFREMSQRGL--VGNTVTYTTLIHGFF---QARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 469 FNRVLNGLALTGNQEFAKEILRMQSR 494
+N +L+GL G E A + R
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQR 498
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 174/367 (47%), Gaps = 6/367 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M R P+ F L A K + + M G +L ++N +++
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 191 VLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ ++ +A +L K + + V+ + + NG+C KR A+ ++ +M E G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+T+ TL+ G F ++ EA M +R C+ ++VTY +V+G G++ + +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
++M A + +V Y+ +I LCK +AL +F EM KG PN+ TY+ +I LC+
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
A + M + I P+V T+N +I F G++ + ++++M S P++
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIF 366
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TY+ LI+ + + ++ A + M+ + P T+N ++NG + E+
Sbjct: 367 TYSSLINGFCMHDRLDE---AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 490 RMQSRCG 496
R S+ G
Sbjct: 424 REMSQRG 430
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 12/319 (3%)
Query: 80 LVDEVLKRLWNHGPKALQFFKHLDR---HPTYIHSPSGFEHAIDIAARMRDYTTAWTLVS 136
++D + K + H AL F ++ P I + I ++ A L+S
Sbjct: 266 VIDSLCK--YRHEDDALNLFTEMENKGVRPNVIT----YSSLISCLCNYERWSDASRLLS 319
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTK 196
M + P F L + + GK A +++ M + D+ +++++++ C
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 197 RVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
R++ A +F+ + C + V+YN + NG+C KR +++ +EM++RG+ VTY
Sbjct: 380 RLDEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
TL+ G+F+ A F +M +++TY T++ G G+++K+ VF+ + R
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
+ + P++ TYN +I+ +CK V++ +F + KG P++ YN +I G C G E
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 375 AVEYMGRMEKHGIRPSVQT 393
A +M + G P T
Sbjct: 559 ADALFRKMREDGPLPDSGT 577
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
+ +A+ +F MV +P++ +N ++ + + + +M++ GI ++ TYN+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 397 VIRYFCDAGEIEKGLSMFEKMG---------------DGSC------------------S 423
+I FC +I L++ KM +G C
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
P+ T+ LI +F+ K+ + V L+ MV RG P T+ V+NGL G+ +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVA---LVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 484 FAKEIL 489
A +L
Sbjct: 243 LAFNLL 248
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 161/316 (50%), Gaps = 7/316 (2%)
Query: 182 LNSFNTILDVLCKTKRV-EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLK 240
+ +NT+L+ L + V EM + + + +YN + NG+C + A Q +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
++ E G+ P TY +L+ GY + L A++ F EM + C + V YT ++HG VA
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+ ++ +F +M P+V TY LI+ LC + AL + +EM G PN++TY
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
V+I LC E+A E +G+M + G+ P+V TYN +I +C G IE + + E M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
S PN TYN LI ++ A +L +M++R LP T+N +++G +G
Sbjct: 423 KLS--PNTRTYNELIKGYC----KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 481 NQEFAKEILRMQSRCG 496
N + A +L + + G
Sbjct: 477 NFDSAYRLLSLMNDRG 492
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 171/367 (46%), Gaps = 7/367 (1%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ++ ++ + A VS++ P + L Y A +VF M
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTP 233
GCR++ ++ ++ LC +R++ A LF + +V +Y ++ C +R
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
AL ++KEM E GI P + TY L+ + +A E +M ++ +V+TY ++
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
+G+ G ++ + V + M L P+ TYN LI+ CK + V A+ V +M+ + +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P++ TYN +I G C SG+ + A + M G+ P TY +I C + +E+ +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
F+ + + PN+ Y LI K ++ A +L +M+ + LP TFN ++
Sbjct: 520 FDSLEQKGVN--PNVVMYTALIDGYCKAGKVDE---AHLMLEKMLSKNCLPNSLTFNALI 574
Query: 474 NGLALTG 480
+GL G
Sbjct: 575 HGLCADG 581
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 159/353 (45%), Gaps = 9/353 (2%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEH 176
ID + A L+ +M L +G P + L Y G AV V M
Sbjct: 365 IDSLCSQCKFEKARELLGQM--LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMAL 236
+ ++N ++ CK+ + L K + D V+YN + +G C A
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
++L M +RG+ P TY +++ + ++ EA + F ++++ +VV YT ++ G+
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
AG+V ++ + ++M+ +P+ T+NALI LC ++ A L+ E+MV G P +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
+T ++I L GD + A +M G +P TY I+ +C G + M K
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTF 469
M + S P+L TY+ LI ++ A +L M D G P + TF
Sbjct: 663 MRENGVS--PDLFTYSSLIKGYGDLGQTN---FAFDVLKRMRDTGCEPSQHTF 710
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 184/456 (40%), Gaps = 94/456 (20%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A +V M S + P R + L + Y + H+A+ V M E D+ ++N+++D
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C++ + A+ L R D +Y + + C KR A + + ++G++P
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+V Y L+ GY + ++ EA +M + C + +T+ ++HG G++K++ +
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKD-------------------------------CVQ 338
++MV+ GL P+V+T LI L K C +
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 339 NALLVFEEMVGK----GCVPNLNTYNVVIRG----------------------------- 365
LL E+M+ K G P+L TY+ +I+G
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 366 ---------------------LCHSGDM---ERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
LC +M + VE + +M +H + P+ ++Y +I
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
C+ G + +F+ M P+ +N L+S KK + A K++ +M+ G
Sbjct: 771 CEVGNLRVAEKVFDHMQRNE-GISPSELVFNALLSCCCKLKKHNE---AAKVVDDMICVG 826
Query: 462 FLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
LP+ + ++ GL G +E + + +CG+
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
C ++ + F L+ K + + Y T+++ G V + K+V+ EM+ + P++ T
Sbjct: 166 CRKMNKDERFELKYK-----LIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYT 220
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
YN ++ CK V+ A ++V G P+ TY +I G C D++ A + M
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSC--------------------- 422
G R + Y +I C A I++ + +F KM D C
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 423 ------------SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFN 470
PN+ TY VLI ++ + K E A +LL +M+++G +P T+N
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK---ARELLGQMLEKGLMPNVITYN 397
Query: 471 RVLNGLALTGNQEFAKEILR-MQSR 494
++NG G E A +++ M+SR
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESR 422
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 22/327 (6%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L +M + PT IL R G A F M G + D +++ T +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ R+ A + R D +Y+ + G+ + +T A VLK M + G P
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 250 TMVTYNTLLKGYFRCHQLRE--------------AWEFFLEMKKRKCEIDVV----TYTT 291
+ T+ +L+K ++ ++ +E+ ++ E V +Y
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 292 MVHGFGVAGEVKKSKRVFDEMVR-AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK 350
++ G G ++ +++VFD M R G+ PS +NAL+ CK A V ++M+
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 351 GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
G +P L + V+I GL G+ ER + + G + ++I G +E
Sbjct: 826 GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAF 885
Query: 411 LSMFEKMGDGSCSCLPNLDTYNVLISA 437
+F M C + TY++LI
Sbjct: 886 YELFNVMEKNGCKF--SSQTYSLLIEG 910
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 203/431 (47%), Gaps = 25/431 (5%)
Query: 65 LAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAAR 124
+ +AL+ S T +V ++L+RL A +FF Y H P + IDI +
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 171
Query: 125 MRDYTTAWTLVSRMRSL--RRGPTPRAFAIL-------AERYAA-AGKPHRAVRVFISMH 174
+ + +V M R T +L ERY K + R+ +
Sbjct: 172 TKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKT- 230
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM 234
+ ++N+FN +LD LCK V+ +L + R R + D+ ++N++ GWC ++
Sbjct: 231 ----QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A+++L+EM E G P TY + + + + EA + F M + + T T
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 295 GFGVAGEVKKSKRVFD---EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
+ K++ F+ M+ G +P V+TY +I+ +C + V A +EM KG
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
P++ TYN +R LC + + A++ GRM + PSVQTYN++I F + + +
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAF 466
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF-LPRKFTFN 470
+ + +M C+ +++TY +I+ +F ++++ A LL E+V++G LP + F+
Sbjct: 467 NTWTEMDKR--DCVQDVETYCAMINGLFDCHRAKE---ACFLLEEVVNKGLKLPYR-VFD 520
Query: 471 RVLNGLALTGN 481
L L+ GN
Sbjct: 521 SFLMRLSEVGN 531
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 176/382 (46%), Gaps = 6/382 (1%)
Query: 110 HSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
H F I R + A +++ +M L P+ F L + + A +
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCL 228
I M + G ++ +NT++D LCK + +A L + D V+YN + G C
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
R A ++L++M +R I+P +VT+ L+ + + L EA E + EM + + + VT
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y ++++G + G + +K+ FD M G P+V TYN LI CK V + +F+ M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
+G ++ TYN +I G C G + A++ M + P + T+ +++ C GEIE
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 409 KGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
L F+ M + + YN++I + K E A +L + G P T
Sbjct: 404 SALVKFDDMRES--EKYIGIVAYNIMIHGLCKADKVEK---AWELFCRLPVEGVKPDART 458
Query: 469 FNRVLNGLALTGNQEFAKEILR 490
+ ++ GL G + A E++R
Sbjct: 459 YTIMILGLCKNGPRREADELIR 480
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 5/353 (1%)
Query: 98 FFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERY 157
FF+ + P + S F + A +R Y T +M +F IL +
Sbjct: 59 FFEMVHSQP--LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116
Query: 158 AAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL-FKTFRGRFRCDS 216
+ A+ V M + G + +F ++L C R+ A SL + + +
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176
Query: 217 VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLE 276
V YN + +G C +AL++L EM ++G+ +VTYNTLL G + +A +
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
M KR DVVT+T ++ F G + +++ ++ EM+++ + P+ TYN++I LC
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
+ +A F+ M KGC PN+ TYN +I G C ++ ++ RM G + TYN
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
+I +C G++ L +F M + P++ T+ +L+ + V + E +V
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVT--PDIITHCILLHGLCVNGEIESALV 407
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 146/314 (46%), Gaps = 1/314 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + + A L++ M G + L +G+ A R+ M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLIKRTP 233
+ D+ +F ++DV K ++ A L+K + ++V+YN I NG C+ R
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A + MA +G P +VTYNTL+ G+ + + E + F M D+ TY T++
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
HG+ G+++ + +F MV + P + T+ L+ LC +++AL+ F++M
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
+ YN++I GLC + +E+A E R+ G++P +TY ++I C G + +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 414 FEKMGDGSCSCLPN 427
+M + C N
Sbjct: 479 IRRMKEEGIICQMN 492
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 5/262 (1%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A + EM P++V + LL + F +M+ D+ ++T ++H
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
F + + V +M++ G PS+ T+ +L+ C + + +A + MV G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N+ YN +I GLC +G++ A+E + MEK G+ V TYN ++ C +G M
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
M S + P++ T+ LI +FV++ + D A +L EM+ P T+N ++N
Sbjct: 235 RDMMKRSIN--PDVVTFTALID-VFVKQGNLD--EAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 475 GLALTGNQEFAKEILRMQSRCG 496
GL + G AK+ + + G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKG 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 338 QNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVV 397
++A +F EMV +P++ + ++ + E + + +ME +GI + ++ ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 398 IRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEM 457
I FC + LS+ KM P++ T+ L+ + + D A L+I M
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYE--PSIVTFGSLLHGFCLVNRIGD---AFSLVILM 167
Query: 458 VDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
V G+ P +N +++GL G A E+L + G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 199/453 (43%), Gaps = 40/453 (8%)
Query: 74 FRWTPELVDEVLK--RLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTA 131
+ +P V VLK + A FF + Y H+ + +D+ A +D
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 132 WTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
+ S ++ T A L + + G + V+ M E+G L ++N +++
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 192 LCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
L V+ A +F+ GR + D V+YN + G+C +T A++ L++M RG
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
+TY T+++ + + EM ++ ++ ++ ++ G G++ + VF+
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
M+R G P+VA Y LI K V++A+ + M+ +G P++ TY+VV+ GLC +G
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS------- 423
+E A++Y G+ + Y+ +I AG +++ +FE+M + C+
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 424 ---------------------------CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
C + TY +L+S MF ++E+ A KL
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEE---ALKLWDM 528
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
M+D+G P F + GL L+G A +IL
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKIL 561
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 156/339 (46%), Gaps = 20/339 (5%)
Query: 167 VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT-FRGRFRCDSVSYNIIANG 225
V ++ M E G + ++F+ ++ LCK ++ +++F+ R + + Y ++ +G
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
+ A+++L M + G P +VTY+ ++ G + ++ EA ++F + I+
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
+ Y++++ G G AG V +++R+F+EM G YNALI K V A+ +F+
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 346 EMVGK-GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
M + GC + TY +++ G+ E A++ M GI P+ + + C +
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 405 GEIEKGLSMFEKMG------DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
G++ + + +++ D +C D N L A +++ A KL +
Sbjct: 552 GKVARACKILDELAPMGVILDAACE-----DMINTLCKAGRIKE-------ACKLADGIT 599
Query: 459 DRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
+RG ++N L G + A +++ + G+
Sbjct: 600 ERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 42/307 (13%)
Query: 112 PSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA--FAILAERYAAAGKPHRAVRV 169
P F I + +T+ M +R+G P + +L + YA +G A+R+
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENM--IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-------------------- 209
M + G + D+ +++ +++ LCK RVE A F T R
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 210 -GRFR-------------C--DSVSYNIIANGWCLIKRTPMALQVLKEMAER-GISPTMV 252
GR C DS YN + + + ++ A+ + K M E G T+
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY 504
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TY LL G F+ H+ EA + + M + + + G ++G+V ++ ++ DE+
Sbjct: 505 TYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL 564
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
G++ A + +I LCK ++ A + + + +G V+I L G
Sbjct: 565 APMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 623
Query: 373 ERAVEYM 379
+ A++ M
Sbjct: 624 DLAMKLM 630
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 186/423 (43%), Gaps = 41/423 (9%)
Query: 109 IHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
+ SP + + D A+ +V M + P + L + + + A+R
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIANGWC 227
V M E G D+ +N+++ L K KR++ A S L + + ++ +Y +G+
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 228 LIKRTPMALQVLKEMAERGISPTMV----------------------------------- 252
A + +KEM E G+ P V
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TY L+ G F+ ++ +A E F EM+ + DV +Y +++GF G ++K+ +FDEM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
V GL P+V YN L+ C+ ++ A + +EM KG PN TY +I G C SGD+
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
A M+ G+ P Y ++ C ++E+ +++F G C + +N
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF---GTNKKGCASSTAPFN 770
Query: 433 VLISAMFVRKKSE-DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL-R 490
LI+ +F K+E V +L+ DR P T+N +++ L GN E AKE+ +
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 491 MQS 493
MQ+
Sbjct: 831 MQN 833
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 170/371 (45%), Gaps = 12/371 (3%)
Query: 109 IHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
I + I+ R ++ + L+ M+ +P + + + ++G A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWC 227
+ M GCR ++ + T++ + R A + K + + D YN + G
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI--D 285
KR A L EM E G+ P TY + GY + A ++ EM R+C + +
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM--RECGVLPN 556
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
V T +++ + G+V ++ + MV G++ TY L+ L K D V +A +F
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
EM GKG P++ +Y V+I G G+M++A M + G+ P+V YN+++ FC +G
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 406 EIEKGLSMFEKMGDGSCSCL-PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
EIEK + ++M S L PN TY +I KS DL A +L EM +G +P
Sbjct: 677 EIEKAKELLDEM---SVKGLHPNAVTYCTIIDGYC---KSGDLAEAFRLFDEMKLKGLVP 730
Query: 465 RKFTFNRVLNG 475
F + +++G
Sbjct: 731 DSFVYTTLVDG 741
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 190/428 (44%), Gaps = 49/428 (11%)
Query: 112 PSGFEHAIDIAARMR--DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
P+ F + I+ + ++ +A V MR P L Y GK A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCL 228
+ SM + G D ++ +++ L K +V+ A +F+ RG+ D SY ++ NG+
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+ A + EM E G++P ++ YN LL G+ R ++ +A E EM + + VT
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y T++ G+ +G++ ++ R+FDEM GLVP Y L+ C+ + V+ A+ +F
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN- 758
Query: 349 GKGCV---------------------------------------PNLNTYNVVIRGLCHS 369
KGC PN TYN++I LC
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G++E A E +M+ + P+V TY ++ + G + +F++ P+
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE--PDHI 876
Query: 430 TYNVLISAMFVRK--KSEDLVVAGKLLIE-MVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
Y+V+I+A F+++ ++ LV+ ++ + VD G T +L+G A G E A+
Sbjct: 877 MYSVIINA-FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Query: 487 EILRMQSR 494
+++ R
Sbjct: 936 KVMENMVR 943
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 199/504 (39%), Gaps = 84/504 (16%)
Query: 71 NSPFRWTPELVDEVLKRLWNHGP-KALQFFKHLDRHPTY-------------IHSPSGFE 116
N PE+V VL+ P K L FF +D + + FE
Sbjct: 55 NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFE 114
Query: 117 HAIDIAARM--RDYTTA--WTLVSRMRSLRRGPTPRA--FAILAERYAAAGKPHRAVRVF 170
A+ + RM R++ A W+ + R G + F IL + Y A G AV VF
Sbjct: 115 KALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVF 174
Query: 171 IS-----------------------------------MHEHGCRQDLNSFNTILDVLCKT 195
S M E D+ +++ ++ C+
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234
Query: 196 KRVEMAHS-LFKTFRGRFRCDSV----------------------SYNIIANGWCLIKRT 232
V++ LFKT + FR ++ +Y+++ +G C IKR
Sbjct: 235 GNVQLGKDVLFKTEK-EFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
A +L EM G+S TY+ L+ G + A EM I Y
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 293 VHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
+ G ++K+K +FD M+ +GL+P Y +LI+ C++ V+ + EM +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLS 412
V + TY V++G+C SGD++ A + M G RP+V Y +I+ F +
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 413 MFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
+ ++M + + P++ YN LI + K+ ++ A L+EMV+ G P FT+
Sbjct: 474 VLKEMKEQGIA--PDIFCYNSLIIGLSKAKRMDE---ARSFLVEMVENGLKPNAFTYGAF 528
Query: 473 LNGLALTGNQEFAKEILRMQSRCG 496
++G A + ++ CG
Sbjct: 529 ISGYIEASEFASADKYVKEMRECG 552
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 154/343 (44%), Gaps = 41/343 (11%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
+++ ++D LCK KR+E A SL D+ +Y+++ +G + A ++ EM
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 243 AERGIS-----------------------------------PTMVTYNTLLKGYFRCHQL 267
GI+ P Y +L++GY R +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
R+ +E +EMKKR I TY T+V G +G++ + + EM+ +G P+V Y L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
I+ + +A+ V +EM +G P++ YN +I GL + M+ A ++ M ++G+
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
+P+ TY I + +A E ++M + C LPN LI+ + K +
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRE--CGVLPNKVLCTGLINEYCKKGK---V 573
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+ A MVD+G L T+ ++NGL + A+EI R
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 9/267 (3%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + + + Y +G A R+F M G D + T++D C+ VE A ++
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE----RGISPTMVTYNTLLKG 260
F T + + +N + N +T + +VL + + R P VTYN ++
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 261 YFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS 320
+ L A E F +M+ V+TYT++++G+ G + VFDE + AG+ P
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGK-----GCVPNLNTYNVVIRGLCHSGDMERA 375
Y+ +I K+ AL++ ++M K GC +++T ++ G G+ME A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+ M M + P T +I C
Sbjct: 935 EKVMENMVRLQYIPDSATVIELINESC 961
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 183/398 (45%), Gaps = 19/398 (4%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
A L ++ T + +P F + R D + LV +M ++ P IL
Sbjct: 278 AWDILSDLMKNKTPLEAPP-FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDLNS--------FNTILDVLCKTKRVEMAHSLFK 206
+ + A+ VF M G R D + FNT++D LCK R++ A L
Sbjct: 337 NTLCKSRRVDEALEVFEQMR--GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 207 TFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ RC ++V+YN + +G+C + A +V+ M E I P +VT NT++ G R
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
H L A FF++M+K + +VVTY T++H V+K+ +++M+ AG P Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
ALI LC+ +A+ V E++ G +L YN++I C + E+ E + MEK
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKS 444
G +P TYN +I +F + E M E+M + P + TY +I A
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD--PTVTTYGAVIDAYC---SV 629
Query: 445 EDLVVAGKLLIEM-VDRGFLPRKFTFNRVLNGLALTGN 481
+L A KL +M + P +N ++N + GN
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 151/319 (47%), Gaps = 4/319 (1%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID R TA +VSRM+ P + + AV F+ M + G
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+ ++ ++ T++ C VE A + K D+ Y + +G C ++R A++
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
V++++ E G S ++ YN L+ + + + +E +M+K + D +TY T++ FG
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM-VGKGCVPNL 356
+ + +R+ ++M GL P+V TY A+I C + AL +F++M + PN
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
YN++I G+ +A+ M+ +RP+V+TYN + + + + E L + ++
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 417 MGDGSCSCLPNLDTYNVLI 435
M + SC PN T +L+
Sbjct: 713 MVEQSCE--PNQITMEILM 729
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
P + + L + H A+RV + E G DL ++N ++ + C E +
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 204 LFKTFR--GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+ G+ + DS++YN + + + K +++++M E G+ PT+ TY ++ Y
Sbjct: 568 MLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 262 FRCHQLREAWEFFLEMK-KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS 320
+L EA + F +M K + V Y +++ F G ++ + +EM + P+
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
V TYNAL + L +K + L + +EMV + C PN T +++ L S ++ + ++M
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 189/509 (37%), Gaps = 100/509 (19%)
Query: 78 PELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPS-----GFEHAIDIAARMRDYTTAW 132
P + ++ +RL ++ A+ FF++LD + + I+ A D
Sbjct: 78 PLVFSQITRRLGSYSL-AISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKL 136
Query: 133 TLVSRMRSLRRGP-TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
+ + + P T A +L + G +++V V+ + + + N ++DV
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVVVDV 194
Query: 192 LCKTKRVEMAHSLFKTFRGR---FRCDSVSYNIIANG-W---CLIKRTPMALQVLKEMAE 244
L + V+ A + + F + ++ +I+ + W L + +AL + +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIAL--ISRFSS 252
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
G+SP V + + + AW+ ++ K K ++ + ++ G ++ +
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-------------- 350
+ +M + P V T LI LCK V AL VFE+M GK
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 351 ----------------------------GCVPNLNTYNVVIRGLCHSGDMERAVEYMGR- 381
CVPN TYN +I G C +G +E A E + R
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 382 ----------------------------------MEKHGIRPSVQTYNVVIRYFCDAGEI 407
MEK G++ +V TY +I C +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
EK + +EKM + CS P+ Y LIS + ++ D A +++ ++ + GF
Sbjct: 493 EKAMYWYEKMLEAGCS--PDAKIYYALISGLCQVRRDHD---AIRVVEKLKEGGFSLDLL 547
Query: 468 TFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+N ++ N E E+L + G
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 183/396 (46%), Gaps = 15/396 (3%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
A L ++ T + +P F + R D + LV +M ++ P IL
Sbjct: 278 AWDILSDLMKNKTPLEAPP-FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 155 ERYAAAGKPHRAVRVFISMH----EHG--CRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+ + A+ VF M + G + D FNT++D LCK R++ A L
Sbjct: 337 NTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 209 RGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
+ RC ++V+YN + +G+C + A +V+ M E I P +VT NT++ G R H
Sbjct: 397 KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
L A FF++M+K + +VVTY T++H V+K+ +++M+ AG P Y A
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
LI LC+ +A+ V E++ G +L YN++I C + E+ E + MEK G
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
+P TYN +I +F + E M E+M + P + TY +I A +
Sbjct: 577 KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD--PTVTTYGAVIDAYC---SVGE 631
Query: 447 LVVAGKLLIEM-VDRGFLPRKFTFNRVLNGLALTGN 481
L A KL +M + P +N ++N + GN
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 151/319 (47%), Gaps = 4/319 (1%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID R TA +VSRM+ P + + AV F+ M + G
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+ ++ ++ T++ C VE A + K D+ Y + +G C ++R A++
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
V++++ E G S ++ YN L+ + + + +E +M+K + D +TY T++ FG
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM-VGKGCVPNL 356
+ + +R+ ++M GL P+V TY A+I C + AL +F++M + PN
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
YN++I G+ +A+ M+ +RP+V+TYN + + + + E L + ++
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 417 MGDGSCSCLPNLDTYNVLI 435
M + SC PN T +L+
Sbjct: 713 MVEQSCE--PNQITMEILM 729
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
P + + L + H A+RV + E G DL ++N ++ + C E +
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYE 567
Query: 204 LFKTFR--GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+ G+ + DS++YN + + + K +++++M E G+ PT+ TY ++ Y
Sbjct: 568 MLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 262 FRCHQLREAWEFFLEMK-KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS 320
+L EA + F +M K + V Y +++ F G ++ + +EM + P+
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
V TYNAL + L +K + L + +EMV + C PN T +++ L S ++ + ++M
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 163/381 (42%), Gaps = 27/381 (7%)
Query: 78 PELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPS-----GFEHAIDIAARMRDYTTAW 132
P + ++ +RL ++ A+ FF++LD + + I+ A D
Sbjct: 78 PLVFSQITRRLGSYSL-AISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKL 136
Query: 133 TLVSRMRSLRRGP-TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
+ + + P T A +L + G +++V V+ + + + N ++DV
Sbjct: 137 LRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVVVDV 194
Query: 192 LCKTKRVEMAHSLFKTFRGR---FRCDSVSYNIIAN----GWCLIKRTPMALQVLKEMAE 244
L + V+ A + + F + ++ +I+ + G L + +AL + +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIAL--ISRFSS 252
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
G+SP V + + + AW+ ++ K K ++ + ++ G ++ +
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK----GCVPNLNT-- 358
+ +M + P V T LI LCK V AL VFE+M GK G V ++
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH 372
Query: 359 YNVVIRGLCHSGDMERAVEYMGRME-KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+N +I GLC G ++ A E + RM+ + P+ TYN +I +C AG++E + +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 418 GDGSCSCLPNLDTYNVLISAM 438
+ PN+ T N ++ M
Sbjct: 433 KEDEIK--PNVVTVNTIVGGM 451
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
G+ P+ I LCK A + +++ +N ++ L + D+ R
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-----GDGSCSCLPNLDT 430
+ + +M++ IRP V T ++I C + +++ L +FEKM DG+ ++
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH- 372
Query: 431 YNVLISAMFV---RKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
+N LI + K++E+L+V KL + P T+N +++G G E AKE
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKL-----EERCAPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 488 IL-RMQ 492
++ RM+
Sbjct: 428 VVSRMK 433
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 175/366 (47%), Gaps = 42/366 (11%)
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK--------TKRVEM 200
++ L +A +G+ AV VF M E GC+ L ++N IL+V K T VE
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 201 ----------------------------AHSLFKTFRGR-FRCDSVSYNIIANGWCLIKR 231
A +F+ + F D V+YN + + + R
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
A++VL EM G SP++VTYN+L+ Y R L EA E +M ++ + DV TYTT
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++ GF AG+V+ + +F+EM AG P++ T+NA I++ + + +F+E+ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
P++ T+N ++ +G M++ G P +T+N +I + G E+ +
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
+++ +M D + P+L TYN +++A+ E + K+L EM D P + T+
Sbjct: 510 TVYRRMLDAGVT--PDLSTYNTVLAALARGGMWEQ---SEKVLAEMEDGRCKPNELTYCS 564
Query: 472 VLNGLA 477
+L+ A
Sbjct: 565 LLHAYA 570
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 159/360 (44%), Gaps = 36/360 (10%)
Query: 165 RAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIA 223
RA F+ ++ D + I+ +L K RV A ++F + F D SY +
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLE-MKKRKC 282
+ + R A+ V K+M E G PT++TYN +L + + +E MK
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 283 EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL 342
D TY T++ +++ +VF+EM AG TYNAL+ V K + A+
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
V EMV G P++ TYN +I G ++ A+E +M + G +P V TY ++ F
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK----------------SED 446
AG++E +S+FE+M + C PN+ T+N I R K S D
Sbjct: 396 RAGKVESAMSIFEEMRNAGCK--PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 447 LVVAGKLLI----------------EMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+V LL EM GF+P + TFN +++ + G+ E A + R
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 177/434 (40%), Gaps = 76/434 (17%)
Query: 130 TAW----TLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
T W +LV +M+S P + L A +VF M G D ++
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 186 NTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
N +LDV K+ R + A + F V+YN + + + A+++ +MAE
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKC---------------------- 282
+G P + TY TLL G+ R ++ A F EM+ C
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 283 ------EI-------DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
EI D+VT+ T++ FG G + VF EM RAG VP T+N LI
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
+ + A+ V+ M+ G P+L+TYN V+ L G E++ + + ME +P
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG-----------------SCSCL------- 425
+ TY ++ + + EI S+ E++ G C L
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 426 ---------PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
P++ T N ++S + + + + A +L M +RGF P T+N ++
Sbjct: 618 SELKERGFSPDITTLNSMVS---IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 477 ALTGNQEFAKEILR 490
+ + + ++EILR
Sbjct: 675 SRSADFGKSEEILR 688
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 176/416 (42%), Gaps = 48/416 (11%)
Query: 107 TYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRA 166
TY SGFE A + + M ++ MR+ P F + Y GK
Sbjct: 386 TYTTLLSGFERAGKVESAM-------SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 167 VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANG 225
+++F ++ G D+ ++NT+L V + +FK R F + ++N + +
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
+ A+ V + M + G++P + TYNT+L R ++ + EM+ +C+ +
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 286 VVTYTTMVHGFGVAGEV-----------------------------------KKSKRVFD 310
+TY +++H + E+ +++R F
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
E+ G P + T N+++ + ++ V A V + M +G P++ TYN ++ S
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
D ++ E + + GI+P + +YN VI +C + +F +M + +P++ T
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN--SGIVPDVIT 736
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
YN I + E+ + ++ M+ G P + T+N +++G ++ AK
Sbjct: 737 YNTFIGSYAADSMFEEAI---GVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 2/305 (0%)
Query: 99 FKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYA 158
FK + R ++ F I +R + A T+ RM P + + A
Sbjct: 477 FKEMKR-AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 159 AAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-TFRGRFRCDSV 217
G ++ +V M + C+ + ++ ++L K + + HSL + + G +V
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 218 SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM 277
+ P A + E+ ERG SP + T N+++ Y R + +A M
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 278 KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCV 337
K+R + TY ++++ + + KS+ + E++ G+ P + +YN +I C+ +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 338 QNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVV 397
++A +F EM G VP++ TYN I E A+ + M KHG RP+ TYN +
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 398 IRYFC 402
+ +C
Sbjct: 776 VDGYC 780
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 8/229 (3%)
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A+++F++ K + +D ++ G G V + +F+ + G V +Y +LI
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD-MERAVEYMGRMEKHGIR 388
+ A+ VF++M GC P L TYNV++ G + + +M+ GI
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276
Query: 389 PSVQTYNVVIRYFCDAGEI-EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
P TYN +I C G + ++ +FE+M S + TYN L+ V KS
Sbjct: 277 PDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSY--DKVTYNALLD---VYGKSHRP 330
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
A K+L EMV GF P T+N +++ A G + A E+ + G
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIAN 224
A R F + E G D+ + N+++ + + + V A+ + + R F +YN +
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
+ ++L+E+ +GI P +++YNT++ Y R ++R+A F EM+
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
DV+TY T + + +++ V M++ G P+ TYN+++ CK + A L
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 345 EEM 347
E++
Sbjct: 793 EDL 795
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 143 RGPTP-----RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
RG TP + + R A GK +R ++ G + D+ S+NT++ C+ R
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILA---KGIKPDIISYNTVIYAYCRNTR 714
Query: 198 VEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
+ A +F R D ++YN + A+ V++ M + G P TYN+
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 257 LLKGYFRCHQLREAWEFFLEMK 278
++ GY + ++ EA F +++
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLR 796
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 183/396 (46%), Gaps = 15/396 (3%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
A L ++ T + +P F + R D + LV +M ++ P IL
Sbjct: 278 AWDILSDLMKNKTPLEAPP-FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 155 ERYAAAGKPHRAVRVFISMH----EHG--CRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+ + A+ VF M + G + D FNT++D LCK R++ A L
Sbjct: 337 NTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 209 RGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
+ RC ++V+YN + +G+C + A +V+ M E I P +VT NT++ G R H
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
L A FF++M+K + +VVTY T++H V+K+ +++M+ AG P Y A
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
LI LC+ +A+ V E++ G +L YN++I C + E+ E + MEK G
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
+P TYN +I +F + E M E+M + P + TY +I A +
Sbjct: 577 KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD--PTVTTYGAVIDAYC---SVGE 631
Query: 447 LVVAGKLLIEM-VDRGFLPRKFTFNRVLNGLALTGN 481
L A KL +M + P +N ++N + GN
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 2/301 (0%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID R TA +VSRM+ P + + AV F+ M + G
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+ ++ ++ T++ C VE A + K D+ Y + +G C ++R A++
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
V++++ E G S ++ YN L+ + + + +E +M+K + D +TY T++ FG
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM-VGKGCVPNL 356
+ + +R+ ++M GL P+V TY A+I C + AL +F++M + PN
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
YN++I G+ +A+ M+ +RP+V+TYN + + + + E L + ++
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 417 M 417
M
Sbjct: 713 M 713
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 189/509 (37%), Gaps = 100/509 (19%)
Query: 78 PELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPS-----GFEHAIDIAARMRDYTTAW 132
P + ++ +RL ++ A+ FF++LD + + I+ A D
Sbjct: 78 PLVFSQITRRLGSYSL-AISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKL 136
Query: 133 TLVSRMRSLRRGP-TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
+ + + P T A +L + G +++V V+ + + + N ++DV
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVVVDV 194
Query: 192 LCKTKRVEMAHSLFKTFRGR---FRCDSVSYNIIANG-W---CLIKRTPMALQVLKEMAE 244
L + V+ A + + F + ++ +I+ + W L + +AL + +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIAL--ISRFSS 252
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
G+SP V + + + AW+ ++ K K ++ + ++ G ++ +
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-------------- 350
+ +M + P V T LI LCK V AL VFE+M GK
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 351 ----------------------------GCVPNLNTYNVVIRGLCHSGDMERAVEYMGR- 381
CVPN TYN +I G C +G +E A E + R
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 382 ----------------------------------MEKHGIRPSVQTYNVVIRYFCDAGEI 407
MEK G++ +V TY +I C +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
EK + +EKM + CS P+ Y LIS + ++ D A +++ ++ + GF
Sbjct: 493 EKAMYWYEKMLEAGCS--PDAKIYYALISGLCQVRRDHD---AIRVVEKLKEGGFSLDLL 547
Query: 468 TFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+N ++ N E E+L + G
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 181/388 (46%), Gaps = 7/388 (1%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA 149
N + F+HL+ H F ID R + A + + +M L P+
Sbjct: 93 NKYEAVISLFRHLEMLGIS-HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
F L + + + A+ + + G ++ +NTI+D LC+ +V A + K +
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 210 GR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
R D V+YN + ++ ++L +M GISP ++T++ L+ Y + QL
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
EA + + EM +R ++VTY ++++G + G + ++K+V + +V G P+ TYN LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
CK V + + + M G + TYN + +G C +G A + +GRM G+
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
P + T+N+++ CD G+I K L E + + + TYN++I + K ED
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKS--KTVVGIITYNIIIKGLCKADKVED-- 447
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
A L + +G P T+ ++ GL
Sbjct: 448 -AWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 172/367 (46%), Gaps = 8/367 (2%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ A TL M P+ F+ L A K + +F + G DL SF T
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 188 ILDVLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG 246
++D C+ R+ +A S L K + F V++ + NG+C + R A+ ++ ++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
P +V YNT++ Q+ A + MKK DVVTY +++ +G S
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
R+ +M+R G+ P V T++ALI V K+ + A + EM+ + PN+ TYN +I GL
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C G ++ A + + + G P+ TYN +I +C A ++ G+ + M
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD--G 357
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
+ TYN L ++ A K+L MV G P +TFN +L+GL G + K
Sbjct: 358 DTFTYNTLYQGYC---QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG--KIGK 412
Query: 487 EILRMQS 493
++R++
Sbjct: 413 ALVRLED 419
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 5/268 (1%)
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+ + + + + + GIS + ++ TL+ + RC +L A +M K E +VT
Sbjct: 92 LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
+ ++V+GF ++ + D++V G P+V YN +I LC+K V AL V + M
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
G P++ TYN +I L HSG + + M + GI P V T++ +I + G++
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 409 KGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
+ + +M S + PN+ TYN LI+ + + ++ A K+L +V +GF P T
Sbjct: 272 EAKKQYNEMIQRSVN--PNIVTYNSLINGLCIHGLLDE---AKKVLNVLVSKGFFPNAVT 326
Query: 469 FNRVLNGLALTGNQEFAKEILRMQSRCG 496
+N ++NG + +IL + SR G
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDG 354
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 149/339 (43%), Gaps = 12/339 (3%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYN 220
K + A+ +F M E + F+ +L + K + E SLF+ D S+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
+ + +C R +AL L +M + G P++VT+ +L+ G+ ++ EA ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
E +VV Y T++ G+V + V M + G+ P V TYN+LI L +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
+ +M+ G P++ T++ +I G + A + M + + P++ TYN +I
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 401 FCDAG---EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEM 457
C G E +K L++ G PN TYN LI+ K+ +D K+L M
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKG-----FFPNAVTYNTLINGYCKAKRVDD---GMKILCVM 350
Query: 458 VDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
G FT+N + G G A+++L CG
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 117/292 (40%), Gaps = 38/292 (13%)
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
T ++L++ A G S Y L+ + +A F +M + +V ++
Sbjct: 29 TALSLRICNSRAFSGRSD----YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSR 84
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++ + + +F + G+ + ++ LI C+ + AL +M+ G
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
P++ T+ ++ G CH A+ + ++ G P+V YN +I C+ G++ L
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMF-------------------------------- 439
+ + M P++ TYN LI+ +F
Sbjct: 205 DVLKHMKKMGIR--PDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 440 VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
V K L+ A K EM+ R P T+N ++NGL + G + AK++L +
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 181/400 (45%), Gaps = 46/400 (11%)
Query: 83 EVLKRLWNHGPKALQFFKHLDRHPTYIHS---PSGFEH--AIDIAARMRDYTTAWTLVSR 137
+ L L +H K QF ++ + S PS F + AI A ++ D L +R
Sbjct: 145 DSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNR 204
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
M+ R P+ VFI +N ++D LCK KR
Sbjct: 205 MKHDRIYPS----------------------VFI-------------YNVLIDGLCKGKR 229
Query: 198 VEMAHSLFKTFRGRFRCDS-VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
+ A LF R S ++YN + +G+C + +V + M I P+++T+NT
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
LLKG F+ + +A EMK D T++ + G+ + + + V++ V +G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 317 LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
+ + T + L+ LCK+ ++ A + + KG VPN YN +I G C GD+ A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLIS 436
+ MEK G++P YN +IR FC+ GE+E KM S P+++TYN+LI
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS--PSVETYNILIG 467
Query: 437 AMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+ RK D +L EM D G +P ++ ++N L
Sbjct: 468 G-YGRKYEFDKCF--DILKEMEDNGTMPNVVSYGTLINCL 504
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 185/430 (43%), Gaps = 54/430 (12%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDI-----AARMRDYTTAWTLVSRMRSLRRGPTPR 148
K L+ F + Y PS F + + I RM D A L M + R P+
Sbjct: 197 KGLELFNRMKHDRIY---PSVFIYNVLIDGLCKGKRMND---AEQLFDEMLARRLLPSLI 250
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+ L + Y AG P ++ +V M L +FNT+L L K VE A ++ K
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 209 RG-RFRCDSVSYNIIANGWCLIKRTPMALQVL---------------------------- 239
+ F D+ +++I+ +G+ ++ AL V
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 240 --------KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
+EMA +G+ P V YNT++ GY R L A M+K+ + D + Y
Sbjct: 371 EKAEEILGREMA-KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++ F GE++ +++ ++M G+ PSV TYN LI +K + +EM G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
+PN+ +Y +I LC + A ME G+ P V+ YN++I C G+IE
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
++M NL TYN LI + + K L A LL+E+ +G P FT+N
Sbjct: 550 RFSKEMLKKGIEL--NLVTYNTLIDGLSMTGK---LSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 472 VLNGLALTGN 481
+++G GN
Sbjct: 605 LISGYGFAGN 614
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 193/413 (46%), Gaps = 35/413 (8%)
Query: 79 ELVDEVLKRLWNHG--PKALQFFKHLDRHPTYIHSPSG---FEHAIDIAARMRDYTTAWT 133
E + VLK + + G P A F D + + + + +E A+D +M YT +
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
L + + G +A IL A P+ + +NT++D C
Sbjct: 361 LNAL---CKEGKIEKAEEILGREMAKGLVPNEVI-----------------YNTMIDGYC 400
Query: 194 KTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
+ + A + + + D ++YN + +C + A + + +M +G+SP++
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TYN L+ GY R ++ + ++ EM+ +VV+Y T+++ ++ +++ V +M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
G+ P V YN LI C K +++A +EM+ KG NL TYN +I GL +G +
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
A + + + + G++P V TYN +I + AG +++ ++++E+M P L TY+
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK--PTLKTYH 638
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
+LIS E + + +L EM P +N VL+ A+ G+ E A
Sbjct: 639 LLISLC----TKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKA 684
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 40/305 (13%)
Query: 135 VSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK 194
V++M+ P+ + IL Y + + + M ++G ++ S+ T+++ LCK
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 195 TKRVEMAHSLFKTFRGRFRCDSVS-YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVT 253
++ A + + R V YN++ +G C + A + KEM ++GI +VT
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
YNTL+ G +L EA + LE+ ++ + DV TY +++ G+G AG V++ +++EM
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
R+G+ P++ TY+ LI LC K+ ++ +F EM K P+L YN V+ GDME
Sbjct: 627 RSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDME 682
Query: 374 RAVEYMGRMEKHGI-----------------------------------RPSVQTYNVVI 398
+A +M + I P TYN+++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 399 RYFCD 403
+ C+
Sbjct: 743 KGHCE 747
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 11/249 (4%)
Query: 143 RGPTP--RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
RG +P R + +L + + GK A R M + G +L ++NT++D L T ++
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 201 AHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A L + R + D +YN + +G+ + + +EM GI PT+ TY+ L+
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
+ + F EM + D++ Y ++H + V G+++K+ + +M+ +
Sbjct: 643 LCTK-EGIELTERLFGEMSLKP---DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 320 SVATYNALI--QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
TYN+LI Q+ K C +L+ +EM + P +TYN++++G C D A
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLI--DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYV 756
Query: 378 YMGRMEKHG 386
+ M++ G
Sbjct: 757 WYREMQEKG 765
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 36/217 (16%)
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+ ++ +F + G+ PS + L+ L K + + VF ++ P+ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM---- 417
I+ D+ + +E RM+ I PSV YNV+I C + +F++M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 418 -----------GDGSCSC------------------LPNLDTYNVLISAMFVRKKSEDLV 448
DG C P+L T+N L+ +F ED
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED-- 302
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
A +L EM D GF+P FTF+ + +G + E A
Sbjct: 303 -AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM 382
+Y L +L + + A +F + +G P+ ++ +++ L + + +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRK 442
+ RPS Y I+ ++ KGL +F +M P++ YNVLI + K
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD--RIYPSVFIYNVLIDGLCKGK 228
Query: 443 KSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
+ D A +L EM+ R LP T+N +++G GN E
Sbjct: 229 RMND---AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE 266
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 184/429 (42%), Gaps = 76/429 (17%)
Query: 123 ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDL 182
+ RD + L+ M +L P F I AGK + A + M + GC D+
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSY---------------------- 219
++ ++D LC ++++ A +F+ + GR + D V+Y
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 220 -------------NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
I+ + C A L M ++GI P + TYNTL+ G R H+
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV------------------------ 302
L +A E F M+ + TY + +G +G+
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 303 -----------KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
+++K++F + GLVP TYN +++ K + A+ + EM+ G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
C P++ N +I L + ++ A + RM++ ++P+V TYN ++ G+I++ +
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
+FE M C PN T+N L + K++++ +A K+L +M+D G +P FT+N
Sbjct: 594 ELFEGMVQKGCP--PNTITFNTLFDCLC---KNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 472 VLNGLALTG 480
++ GL G
Sbjct: 649 IIFGLVKNG 657
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 1/262 (0%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
R+ A L M SL PT + + + Y +G A+ F M G ++
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
+ N L L K R A +F + DSV+YN++ + + A+++L EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
E G P ++ N+L+ ++ ++ EAW+ F+ MK+ K + VVTY T++ G G G++
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
+++ +F+ MV+ G P+ T+N L LCK D V AL + +M+ GCVP++ TYN +
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 363 IRGLCHSGDMERAVEYMGRMEK 384
I GL +G ++ A+ + +M+K
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKK 671
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 9/323 (2%)
Query: 178 CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV--SYNIIANGWCLIKRTPMA 235
CR + I+ CK V A +LF+ F +YN++ G +A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
V ++ G P + TYN LL Y + ++ E +E + EM +CE + +T+ ++ G
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 296 FGVAGEVKKSKRV-FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
AG V + + +D M P+ TY LI L K + A +FE M+ GC P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N YN++I G +G+ + A RM K G+RP ++TY+V++ C G +++GL F
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEM-VDRGFLPRKFTFNRVL 473
+++ + + P++ YN++I+ + + E+ +V L EM RG P +T+N ++
Sbjct: 985 KELKESGLN--PDVVCYNLIINGLGKSHRLEEALV---LFNEMKTSRGITPDLYTYNSLI 1039
Query: 474 NGLALTGNQEFAKEILRMQSRCG 496
L + G E A +I R G
Sbjct: 1040 LNLGIAGMVEEAGKIYNEIQRAG 1062
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 151/312 (48%), Gaps = 8/312 (2%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIAN 224
A VF+ + GC D+ ++N +LD K+ +++ L+K +++++NI+ +
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 225 GWCLIKRTPMALQVLKE-MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
G AL + + M++R SPT TY L+ G + +L EA + F M C
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
+ Y +++GFG AGE + +F MV+ G+ P + TY+ L+ LC V L
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME-KHGIRPSVQTYNVVIRYFC 402
F+E+ G P++ YN++I GL S +E A+ M+ GI P + TYN +I
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
AG +E+ ++ ++ PN+ T+N LI + K E A + MV GF
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLE--PNVFTFNALIRGYSLSGKPEH---AYAVYQTMVTGGF 1098
Query: 463 LPRKFTFNRVLN 474
P T+ ++ N
Sbjct: 1099 SPNTGTYEQLPN 1110
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 21/384 (5%)
Query: 128 YTTAWTLVSRMRSLRRGPTP----RAFAILAERYAAAGKPH---------RAVRVFISMH 174
Y T + +S L++ P R F + Y+ G H A+ V+ M
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTP 233
G R L ++++++ L K + ++ L K + + ++ I +
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A ++LK M + G P +VTY L+ +L A E F +MK + + D VTY T++
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
F ++ K+ + EM + G VP V T+ L+ LCK A + M +G +
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
PNL+TYN +I GL ++ A+E G ME G++P+ TY V I Y+ +G+ L
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
FEKM + PN+ N + ++ + + A ++ + D G +P T+N ++
Sbjct: 456 FEKMKTKGIA--PNIVACNASLYSLAKAGRDRE---AKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 474 NGLALTGNQEFAKEILR--MQSRC 495
+ G + A ++L M++ C
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGC 534
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 121/217 (55%), Gaps = 2/217 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
PT + L + + +G+ + A ++F M ++GCR + +N +++ K + A +L
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 205 FK-TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
FK + R D +Y+++ + C++ R L KE+ E G++P +V YN ++ G +
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 264 CHQLREAWEFFLEMK-KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
H+L EA F EMK R D+ TY +++ G+AG V+++ ++++E+ RAGL P+V
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
T+NALI+ ++A V++ MV G PN TY
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 5/293 (1%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + L + Y +GK ++ M H C + + N ++ L K V+ A L
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 205 FKTFRG--RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
+ F + +Y + +G R A Q+ + M + G P YN L+ G+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ + A F M K D+ TY+ +V + G V + F E+ +GL P V
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 323 TYNALIQVLCKKDCVQNALLVFEEM-VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
YN +I L K ++ AL++F EM +G P+L TYN +I L +G +E A +
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
+++ G+ P+V T+N +IR + +G+ E ++++ M G S PN TY L
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS--PNTGTYEQL 1108
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 38/329 (11%)
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
RD + S M P F IL + AG A M + G +L+++
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 186 NTILDVLCKTKRVEMAHSLF--------------------------------KTFRGRFR 213
NT++ L + R++ A LF +TF + +
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE-KMK 460
Query: 214 CDSVSYNIIANGWCLIK-----RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
++ NI+A L R A Q+ + + G+ P VTYN ++K Y + ++
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
EA + EM + CE DV+ ++++ A V ++ ++F M L P+V TYN L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
L K +Q A+ +FE MV KGC PN T+N + LC + ++ A++ + +M G
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
P V TYN +I G++++ + F +M
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 5/248 (2%)
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
T T N +L+ +L E F M+KR + D TY T+ V G +K++
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+M G V + +YN LI +L K A+ V+ M+ +G P+L TY+ ++ GL
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
D++ + + ME G++P+V T+ + IR AG+I + + ++M D C P++
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG--PDVV 294
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TY VLI A+ +K L A ++ +M P + T+ +L+ + + + K+
Sbjct: 295 TYTVLIDALCTARK---LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 490 RMQSRCGH 497
+ GH
Sbjct: 352 SEMEKDGH 359
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 195/411 (47%), Gaps = 20/411 (4%)
Query: 75 RWTPE---LVDEVLKRLWNHG--PKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYT 129
R TP LVD ++ + G P A+Q F+ L R + G + +D ++
Sbjct: 164 RVTPMCGFLVDALMITYTDLGFIPDAIQCFR-LSRKHRFDVPIRGCGNLLDRMMKLNPTG 222
Query: 130 TAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTIL 189
T W + F IL ++ G A +VF + + + + SFNT++
Sbjct: 223 TIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 190 DVLCKTKRVEMAHSL-FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS 248
+ CK ++ L + + R R D +Y+ + N C + A + EM +RG+
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P V + TL+ G+ R ++ E + +M + + D+V Y T+V+GF G++ ++ +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
D M+R GL P TY LI C+ V+ AL + +EM G + ++ ++ G+C
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 369 SG---DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSC 424
G D ERA+ M R GI+P TY +++ FC G+ + G + ++M DG
Sbjct: 463 EGRVIDAERALREMLRA---GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH--- 516
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+P++ TYNVL++ + K + A LL M++ G +P T+N +L G
Sbjct: 517 VPSVVTYNVLLNGLC---KLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCL 228
++ + + G ++ FN +++ CK + A +F R + VS+N + NG+C
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+ ++ +M + P + TY+ L+ + +++ A F EM KR + V
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
+TT++HG GE+ K + +M+ GL P + YN L+ CK + A + + M+
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI- 407
+G P+ TY +I G C GD+E A+E M+++GI ++ ++ C G +
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 408 --EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
E+ L + G P+ TY +++ A F +K D KLL EM G +P
Sbjct: 468 DAERALREMLRAG-----IKPDDVTYTMMMDA-FCKKG--DAQTGFKLLKEMQSDGHVPS 519
Query: 466 KFTFNRVLNGLALTGNQEFAKEIL 489
T+N +LNGL G + A +L
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLL 543
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 138/282 (48%), Gaps = 9/282 (3%)
Query: 219 YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
+NI+ N +C A +V E+ +R + PT+V++NTL+ GY + L E + +M+
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
K + DV TY+ +++ ++ + +FDEM + GL+P+ + LI + +
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
+++M+ KG P++ YN ++ G C +GD+ A + M + G+RP TY +I
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD--TYNVLISAMFVRKKSEDLVVAGKLLIE 456
FC G++E L + ++M LD ++ L+ M K ++ A + L E
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIE----LDRVGFSALVCGMC---KEGRVIDAERALRE 475
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
M+ G P T+ +++ G+ + ++L+ GH
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 40/259 (15%)
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
E+ + G + +N L+ + + + +A + F E+ KR + VV++ T+++G+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+ + R+ +M ++ P V TY+ALI LCK++ + A +F+EM +G +PN +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
+I G +G+++ E +M G++P + YN ++ +G
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV--------------------NG 389
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
C K+ DLV A ++ M+ RG P K T+ +++G G
Sbjct: 390 FC--------------------KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 481 NQEFAKEILRMQSRCGHAL 499
+ E A EI + + G L
Sbjct: 430 DVETALEIRKEMDQNGIEL 448
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
F+ L G+ A R M G + D ++ ++D CK + L K
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 209 RGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
+ SV +YN++ NG C + + A +L M G+ P +TYNTLL+G+ H+
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH---HRH 568
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVH 294
+ + +++ + D+ +Y ++V+
Sbjct: 569 ANSSKRYIQKPEIGIVADLASYKSIVN 595
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 176/354 (49%), Gaps = 8/354 (2%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A LV +M + P F L K AV + M + GC+ DL ++ +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 189 LDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ LCK ++A +L K + + V Y+ + + C + AL + EM +G+
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P ++TY++L+ + +A +M +RK ++VT++ ++ F G++ K+++
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+++EM++ + P++ TY++LI C D + A + E M+ K C+PN+ TYN +I G C
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+ +++ +E M + G+ + TY +I F A + + +F++M S PN
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM--VSVGVHPN 462
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL-PRKFTFNRVLNGLALTG 480
+ TYN+L+ + K + ++ E + R + P +T+N ++ G+ G
Sbjct: 463 ILTYNILLDGLCKNGK----LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 176/367 (47%), Gaps = 6/367 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M R P+ F+ L A K + M G +L ++N +++
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 191 VLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ R+ +A +L K + + D V+ N + NG+C R A+ ++ +M E G P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
VT+ TL+ G F ++ EA M +R C+ D+VTY +V+G G+ + +
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
++M A + +V Y+ +I LCK +AL +F EM KG PN+ TY+ +I LC+
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G A + M + I P++ T++ +I F G++ K ++E+M S PN+
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID--PNIF 359
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TY+ LI+ + + L A ++L M+ + LP T+N ++NG + E+
Sbjct: 360 TYSSLINGFCMLDR---LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 490 RMQSRCG 496
R S+ G
Sbjct: 417 REMSQRG 423
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 148/286 (51%), Gaps = 3/286 (1%)
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
D A L+++M + + ++ + + A+ +F M G R ++ +++
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
+++ LC R A L R + V+++ + + + + A ++ +EM +R
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
I P + TY++L+ G+ +L EA + M ++ C +VVTY T+++GF A V K
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCK-KDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
+F EM + GLV + TY LI + +DC NA +VF++MV G PN+ TYN+++
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDC-DNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
GLC +G + +A+ +++ + P + TYN++I C AG+ + G
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 10/251 (3%)
Query: 59 ESDPGTLAEALENSPFRWTPELVDEVLKRLWNHG-----PKALQFFKHLDRHPTYIHSPS 113
E D L +EN R ++ L N+G + L +P +
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT--- 325
Query: 114 GFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM 173
F ID + A L M P ++ L + + A ++ M
Sbjct: 326 -FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRT 232
C ++ ++NT+++ CK KRV+ LF+ R ++V+Y + +G+ +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
A V K+M G+ P ++TYN LL G + +L +A F +++ E D+ TY M
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 293 VHGFGVAGEVK 303
+ G AG+ K
Sbjct: 505 IEGMCKAGKWK 515
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 194/429 (45%), Gaps = 46/429 (10%)
Query: 112 PSGFEHAIDIAARMRD---YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
P F + + + MR+ + A+ + + M P F IL + G+ A +
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR--GRFRCDSVSYNIIANGW 226
+F M G + ++ ++ LC+ + A LF + G + DSV++N + +G+
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYP-DSVAHNALLDGF 278
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
C + R A ++L+ + G + Y++L+ G FR + +A+E + M K+ + D+
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
+ YT ++ G AG+++ + ++ M G+ P YNA+I+ LC + ++ + E
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M P+ T+ ++I +C +G + A E +EK G PSV T+N +I C +GE
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 407 IEKGLSMFEKMGDGSCSCL-------------------------------------PNLD 429
+++ + KM G + L P++
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
+YNVLI+ F R + D+ A KLL + +G P T+N ++NGL G +E A ++
Sbjct: 519 SYNVLING-FCR--AGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Query: 490 RMQSRCGHA 498
+ H+
Sbjct: 576 YAKDDFRHS 584
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 14/258 (5%)
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
Q L+E+ G+S + L+ Y + +A E F MK+ C DV TY ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 297 GVAGEV--KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
+ EV + V++EM++ P++ T+ L+ L KK +A +F++M G+G P
Sbjct: 173 -MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG---L 411
N TY ++I GLC G + A + M+ G P +N ++ FC G + + L
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
+FEK G + L Y+ LI +F ++ A +L M+ + P +
Sbjct: 292 RLFEKDG-----FVLGLRGYSSLIDGLF---RARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 472 VLNGLALTGNQEFAKEIL 489
++ GL+ G E A ++L
Sbjct: 344 LIQGLSKAGKIEDALKLL 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC- 402
EE+ G + + V+I G E+AVE GRM++ RP V TYNV++R
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
+ +++ +M C+C PNL T+ +L+ ++ + ++ D A K+ +M RG
Sbjct: 175 EEVFFMLAFAVYNEM--LKCNCSPNLYTFGILMDGLYKKGRTSD---AQKMFDDMTGRGI 229
Query: 463 LPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
P + T+ +++GL G+ + A+++ G+
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGN 264
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 16/199 (8%)
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+ +E+ G+ + LI K + A+ F M C P++ TYNV++R +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 367 CHSGDMERAVEYM------GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
M V +M M K P++ T+ +++ G MF+ M
Sbjct: 173 -----MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR 227
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
S PN TY +LIS + R ++D A KL EM G P N +L+G G
Sbjct: 228 GIS--PNRVTYTILISGLCQRGSADD---ARKLFYEMQTSGNYPDSVAHNALLDGFCKLG 282
Query: 481 NQEFAKEILRMQSRCGHAL 499
A E+LR+ + G L
Sbjct: 283 RMVEAFELLRLFEKDGFVL 301
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 193/434 (44%), Gaps = 23/434 (5%)
Query: 76 WTPELVDEVLKRLWNHGPK----ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTA 131
W LV VL HG K ALQFF+ +R H I + + A
Sbjct: 115 WDHSLVYNVL-----HGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHA 169
Query: 132 WTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
++ M F +L E Y AG +V++F M + G + + S+N++ V
Sbjct: 170 RCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKV 229
Query: 192 LCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
+ + R MA F K +YN++ G+ L R AL+ ++M RGISP
Sbjct: 230 ILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPD 289
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
T+NT++ G+ R ++ EA + F+EMK K VV+YTTM+ G+ V R+F+
Sbjct: 290 DATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFE 349
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT-YNVVIRGLCHS 369
EM +G+ P+ TY+ L+ LC + A + + M+ K P N+ + ++ +
Sbjct: 350 EMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKA 409
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
GDM A E + M + Y V+I C A + + + + + + L + D
Sbjct: 410 GDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEI-ILRHQD 468
Query: 430 T-------YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
T YN +I + ++ V L +++ RG + N ++ G A GN
Sbjct: 469 TLEMEPSAYNPIIEYLCNNGQTAKAEV---LFRQLMKRGVQDQD-ALNNLIRGHAKEGNP 524
Query: 483 EFAKEILRMQSRCG 496
+ + EIL++ SR G
Sbjct: 525 DSSYEILKIMSRRG 538
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 124/335 (37%), Gaps = 59/335 (17%)
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM--------HEHGC 178
D A ++ M +L + +L E A +RA+++ ++ H+
Sbjct: 411 DMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTL 470
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQV 238
+ +++N I++ LC + A LF+ R D + N + G + ++
Sbjct: 471 EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEI 530
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
LK M+ RG+ Y L+K Y
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMS----------------------------------- 555
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK--GCVPNL 356
GE +K D MV G VP + + ++I+ L + VQ A V M+ K G N+
Sbjct: 556 KGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNM 615
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR---------YFCDAGEI 407
+ ++ L G +E A+ + + ++G + + V+ D G +
Sbjct: 616 DLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFG-L 674
Query: 408 EKGLSM----FEKMGDGSCSCLPNLDTYNVLISAM 438
E+ LS+ ++K+ D L+ Y+VL M
Sbjct: 675 ERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIM 709
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 201/473 (42%), Gaps = 52/473 (10%)
Query: 74 FRWTP--ELVDEVLKRLWNHG------------PKALQFFKHLDRHPTYIHSPSGFEHAI 119
F+W P E EVLK +H +QFFK + + H S + I
Sbjct: 74 FKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLI 133
Query: 120 DIAARMRDYTTAW-TLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
R Y + T+ +R+ +P + L + A +A+ VF C
Sbjct: 134 RCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC 193
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMAL 236
+ +++N+++ +L + + E H ++ C D+++Y+ + + + + R A+
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
++ EM + + PT Y TLL YF+ ++ +A + F EMK+ C V TYT ++ G
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
G AG V ++ + +M+R GL P V N L+ +L K V+ VF EM C P +
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 357 NTYNVVIRGLCHS-GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
+YN VI+ L S + + +M+ + PS TY+++I +C +EK L + E
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSE------------------------------ 445
+M + P Y LI+A+ K+ E
Sbjct: 434 EMDEKGFPPCPA--AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 446 --DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
L A L EM ++G P + +N +++G+ G A +LR G
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 21/337 (6%)
Query: 94 KALQFFKHLDR---HPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAF 150
KAL F+ + R PT +++ + + A R+ + A+ M LR G TP
Sbjct: 286 KALDLFEEMKRAGCSPT-VYTYTELIKGLGKAGRVDE---AYGFYKDM--LRDGLTPDVV 339
Query: 151 AI--LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAH-SLFKT 207
+ L G+ VF M C + S+NT++ L ++K AH S +
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK----AHVSEVSS 395
Query: 208 FRGRFRCDSVS-----YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
+ + + DSVS Y+I+ +G+C R AL +L+EM E+G P Y +L+
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ + A E F E+K+ + Y M+ FG G++ ++ +F+EM G P V
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM 382
YNAL+ + K + A + +M GC ++N++N+++ G +G RA+E +
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
+ GI+P TYN ++ F AG E+ M +M D
Sbjct: 576 KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 15/367 (4%)
Query: 130 TAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTIL 189
+A L M+ PT + + L Y GK +A+ +F M GC + ++ ++
Sbjct: 251 SAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 190 DVLCKTKRVEMAHSLFKT-FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS 248
L K RV+ A+ +K R D V N + N + R V EM +
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 249 PTMVTYNTLLKGYFRCH-QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
PT+V+YNT++K F + E +F +MK TY+ ++ G+ V+K+
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ +EM G P A Y +LI L K + A +F+E+ + Y V+I+
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
G + AV+ M+ G P V YN ++ AG I + S+ KM + C +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA--D 548
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD----RGFLPRKFTFNRVLNGLALTGNQE 483
++++N++++ F R + IEM + G P T+N +L A G E
Sbjct: 549 INSHNIILNG-FARTG------VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 484 FAKEILR 490
A ++R
Sbjct: 602 EAARMMR 608
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 66 AEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARM 125
A+++ S F ++ L+D K N KAL + +D + P+ + I+ +
Sbjct: 402 ADSVSPSEFTYSI-LIDGYCKT--NRVEKALLLLEEMD-EKGFPPCPAAYCSLINALGKA 457
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
+ Y A L ++ + R +A++ + + GK AV +F M G D+ ++
Sbjct: 458 KRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAY 517
Query: 186 NTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
N ++ + K + A+SL + R D S+NII NG+ A+++ + +
Sbjct: 518 NALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
GI P VTYNTLL + EA EMK + E D +TY++++ G
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 204/457 (44%), Gaps = 48/457 (10%)
Query: 87 RLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPT 146
RL L+FF + + + H F ++ R R+ A + + G
Sbjct: 76 RLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCV 134
Query: 147 ---PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
R F L Y AG +V++F +M + G + +FN++L +L K R MAH
Sbjct: 135 KLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHD 194
Query: 204 LFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
LF R + DS ++N + NG+C A ++ K+M +P +VTYNT++ G
Sbjct: 195 LFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 262 FRCHQLREAWEFFLEMKKRKCEI--DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
R +++ A M K+ ++ +VV+YTT+V G+ + E+ ++ VF +M+ GL P
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 320 SVATYNALIQVLCKK---DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
+ TYN LI+ L + D +++ L+ + P+ T+N++I+ C +G ++ A+
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF-TTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD-----GSCSCLPNLDTY 431
+ M + P +Y+V+IR C E ++ ++F ++ + G C P Y
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 432 NVLISAMFVRKKSED--------------------LVVAG-----------KLLIEMVDR 460
N + + K++ ++ G +LL+ M+ R
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRR 493
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
F+P T+ +++GL G A + L+ R +
Sbjct: 494 EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSY 530
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 145/330 (43%), Gaps = 25/330 (7%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
P F IL + + AG A++VF M D S++ ++ LC + A +
Sbjct: 350 APDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAET 409
Query: 204 LF------KTFRGRFRCD--SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
LF + G+ C + +YN + C +T A +V +++ +RG+ +Y
Sbjct: 410 LFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP-PSYK 468
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
TL+ G+ R + + A+E + M +R+ D+ TY ++ G GE + M+R+
Sbjct: 469 TLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRS 528
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
+P T+++++ L K+ + + M+ K N++ V+R L S E+A
Sbjct: 529 SYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKA 588
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM----FEKMGDGSCSCLPNLDTY 431
+ + +G ++ ++ Y C+ ++ ++ EK S + ++DT
Sbjct: 589 FLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEK------SQMVDIDTC 639
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
N +I + K+ + A L E+V+ G
Sbjct: 640 NTVIEGLCKHKRHSE---AFSLYNELVELG 666
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 177/373 (47%), Gaps = 7/373 (1%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
++ D A+ + ++ PT F + + G + R+ + E G R +
Sbjct: 252 KLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVW 311
Query: 184 SFNTILDVLCK-TKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
N I+D + +V+ A S+ + D +YNI+ N C + +A+ L E
Sbjct: 312 FLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEA 371
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
+++G+ P ++Y L++ Y + + A + L+M +R C+ D+VTY ++HG V+G +
Sbjct: 372 SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
+ + +++ G+ P A YN L+ LCK A L+F EM+ + +P+ Y +
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSC 422
I G SGD + A + + G++ V +N +I+ FC +G +++ L+ +M +
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE-- 549
Query: 423 SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
+P+ TY+ +I K +D+ A K+ M P T+ ++NG G+
Sbjct: 550 HLVPDKFTYSTIIDGYV---KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606
Query: 483 EFAKEILR-MQSR 494
+ A+E + MQ R
Sbjct: 607 KMAEETFKEMQLR 619
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 175/364 (48%), Gaps = 7/364 (1%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE-HG 177
+ + AR R + ++ +R+ T A + + YA +G +AV ++ + E +
Sbjct: 106 LKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYD 165
Query: 178 CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF-RCDSVSYNIIANGWCLIKRTPMAL 236
D+ + N++L +L K++R+ A ++ R D+ S I+ G C + +
Sbjct: 166 SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGR 225
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
++++ +G P +V YNT++ GY + + A+ F E+K + + T+ TM++GF
Sbjct: 226 KLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
G+ S R+ E+ GL SV N +I + + ++ C P++
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDV 345
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
TYN++I LC G E AV ++ K G+ P+ +Y +I+ +C + E + + +
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
M + C P++ TY +LI + V +D V + ++++DRG P +N +++GL
Sbjct: 406 MAERGCK--PDIVTYGILIHGLVVSGHMDDAV---NMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 477 ALTG 480
TG
Sbjct: 461 CKTG 464
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 151/314 (48%), Gaps = 11/314 (3%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P ++A L + Y + + A ++ + M E GC+ D+ ++ ++ L + ++ A ++
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 205 -FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
K D+ YN++ +G C R A + EM +R I P Y TL+ G+ R
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
EA + F ++ ++DVV + M+ GF +G + ++ + M LVP T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
Y+ +I K+ + A+ +F M C PN+ TY +I G C GD + A E M+
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 384 KHGIRPSVQTYNVVIRYFC-DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRK 442
+ P+V TY +IR ++ +EK + +E M + C+PN T+N L+ FV+K
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM--MTNKCVPNEVTFNCLLQG-FVKK 674
Query: 443 KSEDLVVAGKLLIE 456
S GK+L E
Sbjct: 675 TS------GKVLAE 682
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 40/272 (14%)
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P ++ N+LL + +L +A + + EM R +D + +V G G+V+ +++
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
+ G +P++ YN +I CK ++NA LVF+E+ KG +P L T+ +I G C
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 369 SGDMERAVEYMGRMEKHGIR-----------------------------------PSVQT 393
GD + + +++ G+R P V T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKL 453
YN++I C G+ E + ++ +PN +Y LI A KS++ +A KL
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKK--GLIPNNLSYAPLIQAYC---KSKEYDIASKL 402
Query: 454 LIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
L++M +RG P T+ +++GL ++G+ + A
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 140/335 (41%), Gaps = 42/335 (12%)
Query: 93 PKALQFFKHLDRHPTYIHSPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAF 150
P L F + LDR+ P + +A ID R D+ A + S S+ +G
Sbjct: 468 PAKLLFSEMLDRNIL----PDAYVYATLIDGFIRSGDFDEARKVFSL--SVEKGVKVDVV 521
Query: 151 --AILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+ + + +G A+ M+E D +++TI+D K + + A +F+
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 209 -RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
+ + + + V+Y + NG+C MA + KEM R + P +VTY TL++ +
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Query: 268 REAWEFFLE-MKKRKCEIDVVTYTTMVHGF--GVAGEVKKS------------KRVFDEM 312
E ++ E M KC + VT+ ++ GF +G+V F M
Sbjct: 642 LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRM 701
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD- 371
G A YN+ + LC V+ A + ++MV KG P+ ++ ++ G C G+
Sbjct: 702 KSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNS 761
Query: 372 ---------------MERAVEYMGRMEKHGIRPSV 391
+E AV Y +E+H +P +
Sbjct: 762 KQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVI 796
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 186/435 (42%), Gaps = 54/435 (12%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
EALE S ++TPELV EVL+ G L+FF + + Y H+ + +I +A +
Sbjct: 633 EALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGK 692
Query: 127 DYTTAWTLVSRMRSLRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
D+ +L MR R+G T +AI+ +Y G + A+R F M + G ++
Sbjct: 693 DFKQMRSLFYEMR--RQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSST 750
Query: 185 FNTILDVLC--KTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGW----CLIKRTPMALQV 238
F ++ VLC K + VE A +TFR R V + + C + T A
Sbjct: 751 FKCLITVLCEKKGRNVEEAT---RTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSC 807
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
L + + G P V Y+ ++ R +L EA + + +D TY ++VHG
Sbjct: 808 LDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQ 866
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
G+++K+ + M G P V Y +LI K+ ++ L ++M G+ C P++ T
Sbjct: 867 RGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVT 926
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
Y +I G G +E A ME+ G P +TY+ I C A
Sbjct: 927 YTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQA-------------- 972
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
C KSED A KLL EM+D+G P F V GL
Sbjct: 973 ---C--------------------KSED---ALKLLSEMLDKGIAPSTINFRTVFYGLNR 1006
Query: 479 TGNQEFAKEILRMQS 493
G + A+ L+ +S
Sbjct: 1007 EGKHDLARIALQKKS 1021
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 201/460 (43%), Gaps = 51/460 (11%)
Query: 64 TLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAA 123
++ + LE FR+ PE+V+ VLKR + A++FF + + + H + + IA
Sbjct: 141 SMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAG 200
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
R+ LVS M R + IL Y A K + + VF M + G D
Sbjct: 201 EARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAT 260
Query: 184 SFNTILDVLCKTKRVEMAHSLFK------------TFRGRFRCDSVS------------- 218
++N ++ LC R ++A +K T++ C + S
Sbjct: 261 AYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 219 -----------YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
+ + +C+ + AL++++E+ + + + L+KG R +++
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
+A E MK+RK + D Y ++ G+ +V K+ F+ + ++G P V+TY +
Sbjct: 381 VDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
+Q L K + +F EM+ G P+ V+ G + A + ME+ GI
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
+P+ ++Y++ ++ C + ++ + +F +M + + D ++ +IS+M + E +
Sbjct: 500 KPTWKSYSIFVKELCRSSRYDEIIKIFNQM--HASKIVIRDDIFSWVISSMEKNGEKEKI 557
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
LI+ + + R ++ LNG +G EF++E
Sbjct: 558 -----HLIKEIQK----RSNSYCDELNG---SGKAEFSQE 585
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 185/412 (44%), Gaps = 7/412 (1%)
Query: 79 ELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM 138
++V +VL R G + FF R P + + R + ++ ++ M
Sbjct: 118 DIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGM 177
Query: 139 RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
P I + + RA+ +F G + SFN +L LC+ V
Sbjct: 178 VCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHV 237
Query: 199 EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
A S+F +G DS SYNI+ +GW + +VLKEM E G P ++Y+ L+
Sbjct: 238 SAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLI 297
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
+G R ++ ++ E F +K + D Y M+ F A + +S R + M+
Sbjct: 298 EGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECE 357
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P++ TY+ L+ L K V +AL +FEEM+ +G +P ++ LC G A+
Sbjct: 358 PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI 417
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP-NLDTYNVLISA 437
+ K G R S Y ++++ G+ L+++++M + S P +++ Y ++
Sbjct: 418 YQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQE---SGYPSDVEVYEYIVDG 474
Query: 438 MFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
+ + E+ V+ ++ E + +GF P +F ++R+ + L + E A ++
Sbjct: 475 LCIIGHLENAVL---VMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
GP +++ L E G+ + +V +F ++ G D N +N ++ + + +
Sbjct: 287 GPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMR 346
Query: 204 LFKTFRGRFRCDS--VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
++ C+ +Y+ + +G ++ AL++ +EM RG+ PT + LK
Sbjct: 347 YYRRMLDE-ECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPL 405
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
A + + +K C I Y ++ G+ V+DEM +G V
Sbjct: 406 CSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDV 465
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
Y ++ LC ++NA+LV EE + KG PN Y+ + L S E A + +
Sbjct: 466 EVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLK 525
Query: 382 MEK 384
++K
Sbjct: 526 IKK 528
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 180/401 (44%), Gaps = 17/401 (4%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM-RSLRRGPTPRAFAIL 153
AL+ F+ P +IHS S + R + T + L+ M S+ P F +
Sbjct: 59 ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTI 118
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF--KTFRGR 211
+ A R + V + + G + L FN+ILDVL K + +++A F K
Sbjct: 119 IRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASG 177
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
D +Y I+ G L R ++L+ M G++P V YNTLL + ++ A
Sbjct: 178 IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
EMK E + VT+ ++ + ++ +S + ++ G VP V T +++VL
Sbjct: 238 SLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVL 293
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
C + V AL V E + KG ++ N +++G C G M A + ME+ G P+V
Sbjct: 294 CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
+TYN++I +CD G ++ L F M + N T+N LI + + +++D G
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRW--NFATFNTLIRGLSIGGRTDD----G 407
Query: 452 KLLIEMV---DRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
++EM+ D R +N V+ G E A E L
Sbjct: 408 LKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL 448
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 44/369 (11%)
Query: 135 VSRMRSLR---RGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
V R RSL + P F IL Y K +++ + G D+ + +++V
Sbjct: 233 VGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEV 292
Query: 192 LCKTKRVEMAHSLFKTFRGRF-RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
LC RV A + + + + D V+ N + G+C + + +A + EM +G P
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
+ TYN L+ GY L A + F +MK + T+ T++ G + G ++ +
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412
Query: 311 EMVRAGLV--PSVATYNALIQ---------------------------------VLCKKD 335
M + V + YN +I LC+K
Sbjct: 413 MMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKG 472
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
+ + +++M+G+G VP++ + +I G +E ++E + M G P T+N
Sbjct: 473 GMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFN 532
Query: 396 VVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLI 455
VI FC ++ G+ E M + C+P+ ++YN L+ + V+ D+ A L
Sbjct: 533 AVIIGFCKQDKVMNGIKFVEDMAER--GCVPDTESYNPLLEELCVKG---DIQKAWLLFS 587
Query: 456 EMVDRGFLP 464
MV++ +P
Sbjct: 588 RMVEKSIVP 596
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 132/279 (47%), Gaps = 5/279 (1%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GR 211
L + Y A GK A R FI M G ++ ++N ++ C ++ A F +
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI--SPTMVTYNTLLKGYFRCHQLRE 269
R + ++N + G + RT L++L+ M + + YN ++ G+++ ++ +
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWED 443
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A EF L+M+K V + + G + K +D+M+ G VPS+ + LI
Sbjct: 444 ALEFLLKMEKLFPR--AVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
+ ++ +L + +MV +G +P +T+N VI G C + ++++ M + G P
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
++YN ++ C G+I+K +F +M + S P++
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
D + T++ GFG A +K+ V D + + G+ PS+ +N+++ VL K+D
Sbjct: 111 DDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFT 170
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
+M+ G ++ TY ++++GL + + + + M+ G+ P+ YN ++ C
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G++ + S+ +M + PN T+N+LISA +K L+ + LL + GF+P
Sbjct: 231 GKVGRARSLMSEMKE------PNDVTFNILISAYCNEQK---LIQSMVLLEKCFSLGFVP 281
Query: 465 RKFTFNRVLNGLALTGNQEFAKEIL-RMQSRCG 496
T +V+ L G A E+L R++S+ G
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 227 CLIKRTPM------ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
CLI R +L+++ +M RG P T+N ++ G+ + ++ +F +M +R
Sbjct: 498 CLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER 557
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
C D +Y ++ V G+++K+ +F MV +VP + +++L+ L +K +
Sbjct: 558 GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIH 615
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 184/407 (45%), Gaps = 10/407 (2%)
Query: 60 SDPGTLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAI 119
S P + L+ T ELV EV+ R + A + + + ++ S + +
Sbjct: 91 SSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEIL 150
Query: 120 DIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCR 179
D+ +MR + + M + + +L RYAAA K AV VF E G
Sbjct: 151 DVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGID 210
Query: 180 QDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVL 239
DL +F+ +L LC+ K VE A +LF + R F CD + N+I NGWC++ A +
Sbjct: 211 DDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
K++ P +V+Y T++ + +L +A E + M + DV ++
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG--CVPNLN 357
+ ++ VF E+ G P+V TYN+L++ LCK + + EEM KG C PN
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV 390
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
T++ +++ S D++ +E RM K+ + YN++ R + + EK ++ +M
Sbjct: 391 TFSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM 447
Query: 418 GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
P+ TY + I + + K + A EM+ +G +P
Sbjct: 448 ERSGLG--PDQRTYTIRIHGLHTKGK---IGEALSYFQEMMSKGMVP 489
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M RR P + + + + A+ VF + E G ++ ++N++L
Sbjct: 301 AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLK 360
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCL--IKRTPMALQVLKEMAERGIS 248
LCK +R E L + + S S N + + L +R+ VL+ MA+
Sbjct: 361 HLCKIRRTEKVWELVEEME--LKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCE 418
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
T YN + + Y + + + E + EM++ D TYT +HG G++ ++
Sbjct: 419 MTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSY 478
Query: 309 FDEMVRAGLVPSVATYNALIQ 329
F EM+ G+VP T L Q
Sbjct: 479 FQEMMSKGMVPEPRTEMLLNQ 499
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 164/382 (42%), Gaps = 38/382 (9%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ W L+ M+ P AF + ++ AG A V + G QD S ++
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGR---------------------------------FRC 214
++D CK + E A L +FR R
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D V Y + +G+C + RT A Q + + G P++ T L+ R + +A F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
MK ++DVVTY ++HG+G ++ K + DEM AG+ P VATYN LI + +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
+ A + E++ +G VP+ + VI G GD + A M ++P V T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 395 NVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 454
+ ++ +C A +EK + +F K+ D P++ YN LI D+ A +L+
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLK--PDVVLYNTLIHGYC---SVGDIEKACELI 641
Query: 455 IEMVDRGFLPRKFTFNRVLNGL 476
MV RG LP + T + ++ GL
Sbjct: 642 GLMVQRGMLPNESTHHALVLGL 663
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 130/352 (36%), Gaps = 103/352 (29%)
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA------------------- 270
++ MAL++ ++ + GI P+ +LLK R H L A
Sbjct: 215 RKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVL 274
Query: 271 ----------------WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF----- 309
WE + MK D+V +T + AG +K++ V
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 310 --------------DEMVRAG-------------LVPSVATYNALIQVLCKKDCVQNALL 342
D + G L P++ Y++ + +C + A
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+F+E+ G +P+ Y +I G C+ G ++A +Y G + K G PS+ T ++I
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 403 DAGEIEKGLSMFEKM-----------------GDG----------------SCSCLPNLD 429
G I S+F M G G S P++
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
TYN+LI +M VR ++ A +++ E++ RGF+P F V+ G + G+
Sbjct: 515 TYNILIHSMVVRGYIDE---ANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 164/382 (42%), Gaps = 38/382 (9%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ W L+ M+ P AF + ++ AG A V + G QD S ++
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGR---------------------------------FRC 214
++D CK + E A L +FR R
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D V Y + +G+C + RT A Q + + G P++ T L+ R + +A F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
MK ++DVVTY ++HG+G ++ K + DEM AG+ P VATYN LI + +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
+ A + E++ +G VP+ + VI G GD + A M ++P V T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 395 NVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 454
+ ++ +C A +EK + +F K+ D P++ YN LI D+ A +L+
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLK--PDVVLYNTLIHGYC---SVGDIEKACELI 641
Query: 455 IEMVDRGFLPRKFTFNRVLNGL 476
MV RG LP + T + ++ GL
Sbjct: 642 GLMVQRGMLPNESTHHALVLGL 663
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 130/352 (36%), Gaps = 103/352 (29%)
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA------------------- 270
++ MAL++ ++ + GI P+ +LLK R H L A
Sbjct: 215 RKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVL 274
Query: 271 ----------------WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF----- 309
WE + MK D+V +T + AG +K++ V
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 310 --------------DEMVRAG-------------LVPSVATYNALIQVLCKKDCVQNALL 342
D + G L P++ Y++ + +C + A
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+F+E+ G +P+ Y +I G C+ G ++A +Y G + K G PS+ T ++I
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 403 DAGEIEKGLSMFEKM-----------------GDG----------------SCSCLPNLD 429
G I S+F M G G S P++
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
TYN+LI +M VR ++ A +++ E++ RGF+P F V+ G + G+
Sbjct: 515 TYNILIHSMVVRGYIDE---ANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 172/365 (47%), Gaps = 7/365 (1%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ TA +V R+ + P ++ L G A+R++ +M G +D +FN
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG 246
++ LCK +V A + ++VS++ + NG+ A V EM + G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
PT TY +LLKG + LREA +F + +D V Y T++ +G + K+
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV-PNLNTYNVVIRG 365
+F EMV+ ++P TY +LI LC+K A+L +E +G V PN Y + G
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 733
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
+ +G + + + +M+ G P + T N +I + G+IEK + +MG+ +
Sbjct: 734 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG-- 791
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
PNL TYN+L+ RK D+ + L ++ G LP K T + ++ G+ + E
Sbjct: 792 PNLTTYNILLHGYSKRK---DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 486 KEILR 490
+IL+
Sbjct: 849 LKILK 853
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 196/481 (40%), Gaps = 111/481 (23%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F I++ + + L+ +M PT + + Y G+ A+ + M
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
G D+ ++N ++ LC++ R+ + L + R R + V+YN + NG+ +
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355
Query: 234 MALQVLKE-----------------------------------MAERGISPTMVTYNTLL 258
+A Q+L E M +G++P+ V+Y LL
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 259 KG-------------YFRCHQ----------------------LREAWEFFLEMKKRKCE 283
G Y R + L EA EM K +
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
D+VTY+ +++GF G K +K + + R GL P+ Y+ LI C+ C++ A+ +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCD 403
+E M+ +G + T+NV++ LC +G + A E+M M GI P+ +++ +I + +
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 404 AGEIEKGLSMFEKMG---------------DGSCS---------------CLP-NLDT-- 430
+GE K S+F++M G C +P +DT
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE----FAK 486
YN L++AM KS +L A L EMV R LP +T+ +++GL G FAK
Sbjct: 656 YNTLLTAMC---KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 487 E 487
E
Sbjct: 713 E 713
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 177/405 (43%), Gaps = 43/405 (10%)
Query: 130 TAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTIL 189
+ W+ + M + P F IL A G ++ + M + G + ++NT+L
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 190 --------------------------DV---------LCKTKRVEMAHSLFKTFRGR-FR 213
DV LC++ R+ + L + R R
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
+ V+YN + NG+ + +A Q+L EM G+SP VT+N L+ G+ +EA +
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
F M+ + V+Y ++ G E ++ + M R G+ TY +I LCK
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
+ A+++ EM G P++ TY+ +I G C G + A E + R+ + G+ P+
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMG-DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
Y+ +I C G +++ + ++E M +G + T+NVL++++ K+ + A +
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTR---DHFTFNVLVTSLC---KAGKVAEAEE 569
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
+ M G LP +F+ ++NG +G A + ++ GH
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 159/357 (44%), Gaps = 7/357 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A+++ M + PT + L + G A + S+H D +NT+L
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG-IS 248
+CK+ + A SLF R DS +Y + +G C +T +A+ KE RG +
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P V Y + G F+ Q + F +M D+VT M+ G+ G+++K+ +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
EM P++ TYN L+ K+ V + L++ ++ G +P+ T + ++ G+C
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
S +E ++ + G+ T+N++I C GEI + + M S +
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL--DK 899
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
DT + ++S + + ++ + +L EM +G P + ++NGL G+ + A
Sbjct: 900 DTCDAMVSVLNRNHRFQE---SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 5/262 (1%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
+L++ + M G +P++ T N +L + + W F EM KRK DV T+ +++
Sbjct: 182 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 241
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G +KS + +M ++G P++ TYN ++ CKK + A+ + + M KG
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
++ TYN++I LC S + + + M K I P+ TYN +I F + G++ +
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
+M S PN T+N LI ++ A K+ M +G P + ++ +L+
Sbjct: 362 NEMLSFGLS--PNHVTFNALIDGHISEGNFKE---ALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 475 GLALTGNQEFAKEILRMQSRCG 496
GL + A+ R G
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNG 438
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 8/238 (3%)
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
Y+ L++ Y R ++++ E F M V T ++ +GE EM+
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
+ + P VAT+N LI VLC + + + + ++M G P + TYN V+ C G +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNV 433
A+E + M+ G+ V TYN++I C + I KG + M PN TYN
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH--PNEVTYNT 343
Query: 434 LISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
LI+ K +++A +LL EM+ G P TFN +++G GN KE L+M
Sbjct: 344 LINGFSNEGK---VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN---FKEALKM 395
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 167/377 (44%), Gaps = 11/377 (2%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
W G + +L P + + + ID +RM L+ M + GP
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNA----MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 795
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+ IL Y+ + ++ S+ +G D + ++++ +C++ +E+ + K F
Sbjct: 796 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 855
Query: 209 RGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
R D ++N++ + C A ++K M GIS T + ++ R H+
Sbjct: 856 ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRF 915
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
+E+ EM K+ + Y +++G G++K + V +EM+ + P +A+
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
++ L K A L+ M+ VP + ++ ++ C +G++ A+E M G+
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISAMFVRKKSED 446
+ + +YNV+I C G++ ++E+M GDG L N TY LI + R+ +
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF---LANATTYKALIRGLLARETA-- 1090
Query: 447 LVVAGKLLIEMVDRGFL 463
A +L +++ RGF+
Sbjct: 1091 FSGADIILKDLLARGFI 1107
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
R C + Y ++ + G ++ S +F M G PSV T NA++ + K +
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
+EM+ + P++ T+N++I LC G E++ M +MEK G P++ TYN V+
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 400 YFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD 459
++C G + + + + M ++ TYN+LI + +S + LL +M
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVD--ADVCTYNMLIHDLC---RSNRIAKGYLLLRDMRK 331
Query: 460 RGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHALRHL 502
R P + T+N ++NG + G A ++L G + H+
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 200/430 (46%), Gaps = 13/430 (3%)
Query: 73 PFRWTPELVDEVLKRLWNHGPKA-LQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTA 131
P +P+ V ++LK N P+A F RHP Y HS + H + + R
Sbjct: 5 PKSLSPKHVLKLLKSEKN--PRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 132 WTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE-HGCRQDLNSFNTILD 190
+V +RS + + Y P +A+ VF M E GC + S+NT+L+
Sbjct: 63 SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 122
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+ K+ SLF F ++ +YN++ C K A L M + G P
Sbjct: 123 AFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+ +Y+T++ + +L +A E F EM +R DV Y ++ GF + K + ++
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 310 DEMVR-AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
D ++ + + P+V T+N +I L K V + L ++E M +L TY+ +I GLC
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
+G++++A +++ V TYN ++ FC G+I++ L ++ M + N+
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS---VNI 359
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+YN+LI + K ++ + +L M +G+ K T+ ++GL + G A +
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRL---MPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 489 LR-MQSRCGH 497
++ ++S GH
Sbjct: 417 MQEVESSGGH 426
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 6/320 (1%)
Query: 123 ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDL 182
++ + T W L M + + I G ++A+ V + G D+
Sbjct: 373 GKIDEATMIWRL---MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKE 241
++ +I+D LCK KR+E A +L K + +S N + G R A L+E
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M + G PT+V+YN L+ G + + EA F EM + + D+ TY+ ++ G +
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+ + ++ + +++GL V +N LI LC + +A+ V M + C NL TYN
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
++ G GD RA G M K G++P + +YN +++ C + + F+ +
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH- 668
Query: 422 CSCLPNLDTYNVLISAMFVR 441
P + T+N+L+ A+ R
Sbjct: 669 -GIFPTVYTWNILVRAVVNR 687
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 119 IDIAARMRDYTTAWTLVSRM-RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHG 177
ID + +D+ TA L R+ P + I+ + G+ ++++ M ++
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 178 CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMAL 236
+DL ++++++ LC V+ A S+F R D V+YN + G+C + +L
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
++ + M + S +V+YN L+KG ++ EA + M + D TY +HG
Sbjct: 346 ELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ------------------ 338
V G V K+ V E+ +G V Y ++I LCKK ++
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 339 ---NALL--------------VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
NAL+ EM GC P + +YN++I GLC +G A ++
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 382 MEKHGIRPSVQTY-----------------------------------NVVIRYFCDAGE 406
M ++G +P ++TY N++I C G+
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
++ +++ M +C+ NL TYN L+ F S V + +M G P
Sbjct: 585 LDDAMTVMANMEHRNCT--ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM---GLQPDI 639
Query: 467 FTFNRVLNGLALTGNQEFAKEIL 489
++N ++ GL + +A E
Sbjct: 640 ISYNTIMKGLCMCRGVSYAMEFF 662
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 168/382 (43%), Gaps = 20/382 (5%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
I ++ + +++ A + M P +++ + A AGK A+ +F M E G
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSY------NIIANGWCLIKRT 232
D+ +N ++D K K + A L+ R DS Y NI+ +G R
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWD----RLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
L++ + M + + TY++L+ G + +A F E+ +RK IDVVTY TM
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 293 VHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
+ GF G++K+S ++ M V ++ +YN LI+ L + + A +++ M KG
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLS 412
+ TY + I GLC +G + +A+ M +E G V Y +I C +E+ +
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 413 MFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
+ ++M N N LI + + L A L EM G P ++N +
Sbjct: 451 LVKEMSKHGVEL--NSHVCNALIGGLI---RDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 473 LNGLALTGN----QEFAKEILR 490
+ GL G F KE+L
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLE 527
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 308 VFDEMVR-AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+FD R G S Y+ +++ L + V + + E + + C + + VI+
Sbjct: 29 LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTY 88
Query: 367 CHSGDMERAVEYMGRM-EKHGIRPSVQTYNVVIRYFCDAGE---IEKGLSMFEKMGDGSC 422
+ ++A++ RM E G P++++YN ++ F +A + +E + FE G
Sbjct: 89 GKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG---- 144
Query: 423 SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
PNL TYNVLI +K+ E A L M GF P F+++ V+N LA G
Sbjct: 145 -VAPNLQTYNVLIKMSCKKKEFEK---ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 483 EFAKEILRMQSRCGHA 498
+ A E+ S G A
Sbjct: 201 DDALELFDEMSERGVA 216
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 176/340 (51%), Gaps = 11/340 (3%)
Query: 155 ERYAAAGKPHRAVRVFISMHEH-GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRF 212
+ Y A K A+ F +M + ++ +NT+++ K+ ++ A ++ + R
Sbjct: 165 DAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERA 224
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
+ D ++NI+ NG+C + +AL + +EM E+G P +V++NTL++G+ ++ E +
Sbjct: 225 KPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVK 284
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
EM + C T +V G G V + + +++ ++PS Y +L++ LC
Sbjct: 285 MAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLC 344
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
++ A+ + EE+ KG P ++ GL SG E+A +M +M GI P
Sbjct: 345 GENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSV 404
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
T+N+++R C + + ++ S P+ TY+VL+S + ++ G+
Sbjct: 405 TFNLLLRDLCSSDHSTDANRL--RLLASSKGYEPDETTYHVLVSGFTKEGRRKE----GE 458
Query: 453 LLI-EMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
+L+ EM+D+ LP FT+NR+++GL+ TG +F+++ +RM
Sbjct: 459 VLVNEMLDKDMLPDIFTYNRLMDGLSCTG--KFSRKQVRM 496
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 1/270 (0%)
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
D A RM R P F IL Y + K A+ +F M E GC ++ SFN
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 187 TILDVLCKTKRVEMAHSL-FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
T++ + ++E + ++ R + I+ +G C R A ++ ++ +
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
+ P+ Y +L++ ++ A E E+ K+ + TT+V G +G +K+
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
++M+ AG++P T+N L++ LC D +A + KG P+ TY+V++ G
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSG 447
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
G + + M + P + TYN
Sbjct: 448 FTKEGRRKEGEVLVNEMLDKDMLPDIFTYN 477
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 20/332 (6%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTF--------RGRFRCDSVS--YNIIANGWCL 228
R D +SF + L T R + + L G F C + + + +C
Sbjct: 110 RHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCR 169
Query: 229 IKRTPMALQVLKEMAERGIS--PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
++ AL M +R I P + YNT++ GY + + +A F+ M K + + DV
Sbjct: 170 ARKMDYALLAFDTM-KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDV 228
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
T+ +++G+ + + + +F EM G P+V ++N LI+ ++ + + E
Sbjct: 229 CTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYE 288
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M+ GC + T +++ GLC G ++ A + + + PS Y ++ C +
Sbjct: 289 MIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENK 348
Query: 407 IEKGLSMFEKM-GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
+ + M E++ G C T L+ + +KS A + +M++ G LP
Sbjct: 349 AVRAMEMMEELWKKGQTPCFIACTT---LVEGL---RKSGRTEKASGFMEKMMNAGILPD 402
Query: 466 KFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
TFN +L L + + A + + S G+
Sbjct: 403 SVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 2/282 (0%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
KAL+F++ + + + F I+ R + A L M+ P +F L
Sbjct: 211 KALRFYQRMGKERAKPDVCT-FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL-FKTFRGRF 212
+ ++GK V++ M E GCR + ++D LC+ RV+ A L R
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
Y + C + A+++++E+ ++G +P + TL++G + + +A
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
F +M D VT+ ++ + + R+ G P TY+ L+
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
K+ + ++ EM+ K +P++ TYN ++ GL +G R
Sbjct: 450 KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 9/389 (2%)
Query: 109 IHSPSGFEHAIDIA--ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRA 166
I PS E + + R D A RMR+ PT R + L YA A
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 167 VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVS-YNIIANG 225
+ M E G L +++ I+ K E A F + + + S Y I
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
C A +++EM E GI + Y+T++ GY ++ F +K+
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
VVTY +++ + G++ K+ V M G+ ++ TY+ +I K NA VFE
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
+MV +G P++ YN +I C G+M+RA++ + M+K RP+ +T+ +I + +G
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 406 EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
++ + L +F+ M C C+P + T+N LI+ + +++ E V ++L EM G
Sbjct: 604 DMRRSLEVFDMM--RRCGCVPTVHTFNGLINGLVEKRQMEKAV---EILDEMTLAGVSAN 658
Query: 466 KFTFNRVLNGLALTGNQEFAKEIL-RMQS 493
+ T+ +++ G A G+ A E R+Q+
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 168/349 (48%), Gaps = 8/349 (2%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ + + Y + + VF + E G + ++ ++++ K ++ A + + +
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 210 GR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
+ + +Y+++ NG+ +K A V ++M + G+ P ++ YN ++ + +
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
A + EM+K + T+ ++HG+ +G++++S VFD M R G VP+V T+N LI
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
L +K ++ A+ + +EM G N +TY +++G GD +A EY R++ G+
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 691
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP-NLDTYNVLISAMFVRKKSEDL 447
+ TY +++ C +G ++ L++ ++M S +P N YN+LI R D+
Sbjct: 692 VDIFTYEALLKACCKSGRMQSALAVTKEM---SARNIPRNSFVYNILIDGWARRG---DV 745
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
A L+ +M G P T+ ++ + G+ A + + G
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 159/342 (46%), Gaps = 39/342 (11%)
Query: 125 MRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
M + A V M+ LR PT R F + YA +G R++ VF M GC +++
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
FN +++ L + +++E A +++L EM
Sbjct: 627 FNGLINGLVEKRQMEKA----------------------------------VEILDEMTL 652
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
G+S TY +++GY +A+E+F ++ ++D+ TY ++ +G ++
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
+ V EM + + YN LI ++ V A + ++M +G P+++TY I
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
+GDM RA + + ME G++P+++TY +I+ + A EK LS +E+M +
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM--KAMGI 830
Query: 425 LPNLDTYNVLISAMFVRKK-SEDLVVAGKLLI--EMVDRGFL 463
P+ Y+ L++++ R +E + +G + I EMV+ G +
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLI 872
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 5/263 (1%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A + + M RGI+PT Y +L+ Y + EA +MK+ E+ +VTY+ +V
Sbjct: 328 ARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVG 387
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
GF AG + + FDE R + + Y +I C+ ++ A + EM +G
Sbjct: 388 GFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 447
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+ Y+ ++ G D ++ + R+++ G P+V TY +I + G+I K L +
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
M + NL TY+++I+ FV+ K D A + +MV G P +N +++
Sbjct: 508 RVMKEEGVK--HNLKTYSMMING-FVKLK--DWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 475 GLALTGNQEFAKEILRMQSRCGH 497
GN + A + ++ + H
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRH 585
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 77/178 (43%), Gaps = 5/178 (2%)
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
PS + +++ ++ + A FE M +G P Y +I DM+ A+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ +M++ GI S+ TY+V++ F AG E F++ + N Y +I
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL--NASIYGKII--- 421
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+ ++ ++ A L+ EM + G ++ +++G + +++ + + CG
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 167/343 (48%), Gaps = 10/343 (2%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
EAL+N R ++VLK++ ++G AL FF L R P + H + + R +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 127 DYTTAWTLVSRMRSLRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+ L+ M +R G P + L Y A + A+ VF M E GC+ D +
Sbjct: 379 QFGAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIK--RTPMALQVLKE 241
+ T++D+ K +++A +++ + G D+ +Y++I N CL K P A ++ E
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGHLPAAHKLFCE 494
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M ++G +P +VTYN ++ + + + A + + +M+ E D VTY+ ++ G G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+++++ VF EM + +P Y L+ + K V+ A ++ M+ G PN+ T N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
++ + A E + M G+RPS+QTY +++ D
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 5/279 (1%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
F+ D +Y + K+ ++L EM G P VTYN L+ Y R + L EA
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F +M++ C+ D VTY T++ AG + + ++ M GL P TY+ +I L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
K + A +F EMV +GC PNL TYN+++ + + + A++ M+ G P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
TY++V+ G +E+ ++F +M + +P+ Y +L+ + K+ ++ A
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQK--NWIPDEPVYGLLVD---LWGKAGNVEKAW 594
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+ M+ G P T N +L+ A E+L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 50/283 (17%)
Query: 218 SYNIIANGWCLIKR---TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
S +I+ N +++R P A + L+ + G+ N +LK + + A FF
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNL---GLRIDAYQANQVLK---QMNDYGNALGFF 351
Query: 275 LEMKKRKC-EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
+K++ + D TYTTMV G A + ++ DEMVR
Sbjct: 352 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR------------------- 392
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
GC PN TYN +I + + A+ +M++ G +P T
Sbjct: 393 ----------------DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKL 453
Y +I AG ++ + M+++M G S P+ TY+V+I+ + K+ L A KL
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLS--PDTFTYSVIINCL---GKAGHLPAAHKL 491
Query: 454 LIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
EMVD+G P T+N +++ A N + A ++ R G
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 167/343 (48%), Gaps = 10/343 (2%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
EAL+N R ++VLK++ ++G AL FF L R P + H + + R +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 127 DYTTAWTLVSRMRSLRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+ L+ M +R G P + L Y A + A+ VF M E GC+ D +
Sbjct: 379 QFGAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIK--RTPMALQVLKE 241
+ T++D+ K +++A +++ + G D+ +Y++I N CL K P A ++ E
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGHLPAAHKLFCE 494
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M ++G +P +VTYN ++ + + + A + + +M+ E D VTY+ ++ G G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+++++ VF EM + +P Y L+ + K V+ A ++ M+ G PN+ T N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
++ + A E + M G+RPS+QTY +++ D
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 5/279 (1%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
F+ D +Y + K+ ++L EM G P VTYN L+ Y R + L EA
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F +M++ C+ D VTY T++ AG + + ++ M GL P TY+ +I L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
K + A +F EMV +GC PNL TYN+++ + + + A++ M+ G P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
TY++V+ G +E+ ++F +M + +P+ Y +L+ + K+ ++ A
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQK--NWIPDEPVYGLLVD---LWGKAGNVEKAW 594
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+ M+ G P T N +L+ A E+L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 50/283 (17%)
Query: 218 SYNIIANGWCLIKR---TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
S +I+ N +++R P A + L+ + G+ N +LK + + A FF
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNL---GLRIDAYQANQVLK---QMNDYGNALGFF 351
Query: 275 LEMKKRKC-EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
+K++ + D TYTTMV G A + ++ DEMVR
Sbjct: 352 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR------------------- 392
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
GC PN TYN +I + + A+ +M++ G +P T
Sbjct: 393 ----------------DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKL 453
Y +I AG ++ + M+++M G S P+ TY+V+I+ + K+ L A KL
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLS--PDTFTYSVIINCL---GKAGHLPAAHKL 491
Query: 454 LIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
EMVD+G P T+N +++ A N + A ++ R G
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 167/343 (48%), Gaps = 10/343 (2%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
EAL+N R ++VLK++ ++G AL FF L R P + H + + R +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 127 DYTTAWTLVSRMRSLRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+ L+ M +R G P + L Y A + A+ VF M E GC+ D +
Sbjct: 379 QFGAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIK--RTPMALQVLKE 241
+ T++D+ K +++A +++ + G D+ +Y++I N CL K P A ++ E
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGHLPAAHKLFCE 494
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M ++G +P +VTYN ++ + + + A + + +M+ E D VTY+ ++ G G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+++++ VF EM + +P Y L+ + K V+ A ++ M+ G PN+ T N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
++ + A E + M G+RPS+QTY +++ D
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 5/279 (1%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
F+ D +Y + K+ ++L EM G P VTYN L+ Y R + L EA
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F +M++ C+ D VTY T++ AG + + ++ M GL P TY+ +I L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
K + A +F EMV +GC PNL TYN+++ + + + A++ M+ G P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
TY++V+ G +E+ ++F +M + +P+ Y +L+ + K+ ++ A
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQK--NWIPDEPVYGLLVD---LWGKAGNVEKAW 594
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+ M+ G P T N +L+ A E+L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 50/283 (17%)
Query: 218 SYNIIANGWCLIKR---TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
S +I+ N +++R P A + L+ + G+ N +LK + + A FF
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNL---GLRIDAYQANQVLK---QMNDYGNALGFF 351
Query: 275 LEMKKRKC-EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
+K++ + D TYTTMV G A + ++ DEMVR
Sbjct: 352 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR------------------- 392
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
GC PN TYN +I + + A+ +M++ G +P T
Sbjct: 393 ----------------DGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKL 453
Y +I AG ++ + M+++M G S P+ TY+V+I+ + K+ L A KL
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLS--PDTFTYSVIINCL---GKAGHLPAAHKL 491
Query: 454 LIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
EMVD+G P T+N +++ A N + A ++ R G
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 15/358 (4%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAF--AILAERYAAAGKPHRAVRVFISMHEHGCRQD 181
RM++ A ++ S M L +G P F +IL + + A V M+ +
Sbjct: 496 RMKNMDLARSIFSEM--LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN 553
Query: 182 LNSFNTILDVLCK----TKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+NTI++ LCK +K EM +L K R C SYN I +G+ + T A++
Sbjct: 554 EVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSC--TSYNSIIDGFVKVGDTDSAVE 611
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+EM+E G SP +VT+ +L+ G+ + +++ A E EMK + ++D+ Y ++ GF
Sbjct: 612 TYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC 671
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
++K + +F E+ GL+P+V+ YN+LI + A+ ++++MV G +L
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
TY +I GL G++ A + + GI P + V++ G+ K M E+M
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 418 GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+ PN+ Y+ +I+ + +L A +L EM+++G + FN +++G
Sbjct: 792 KKKDVT--PNVLLYSTVIAG---HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 163/360 (45%), Gaps = 20/360 (5%)
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE----HG--CRQDLNSFNTILD 190
RM+S+R P+ + + A P A+ +F E HG C N I
Sbjct: 405 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-------NKIFL 457
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+ CK +V+ A S K + + V YN + C +K +A + EM E+G+ P
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
TY+ L+ G+F+ + AW+ +M E + V Y T+++G G+ K+K +
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 310 DEMVRAGLVP-SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
+++ S +YN++I K +A+ + EM G PN+ T+ +I G C
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
S M+ A+E M+ ++ + Y +I FC +++ ++F ++ + +PN+
Sbjct: 638 SNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE--LGLMPNV 695
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
YN LIS K + A L +MV+ G FT+ +++GL GN A ++
Sbjct: 696 SVYNSLISGFRNLGKMD---AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 152/335 (45%), Gaps = 16/335 (4%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNI 221
KP AV++F + G D F+ + CKT + MA L + RG+ +
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 222 IANGWCLIKRTPM--ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
+ +K M A++V+ EM GI +++ +L+ GY + ++L +A + F M++
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
D V ++ MV F E++K+ + M + PS + +IQ K + +
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEA 433
Query: 340 ALLVF----EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
AL +F E + G + N + C G ++ A ++ ME+ GI P+V YN
Sbjct: 434 ALEIFNDSFESWIAHGFM-----CNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 396 VVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLI 455
++ C ++ S+F +M + PN TY++LI F K ++ A ++
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLE--PNNFTYSILIDGFFKNKDEQN---AWDVIN 543
Query: 456 EMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+M F + +N ++NGL G AKE+L+
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 165/381 (43%), Gaps = 41/381 (10%)
Query: 146 TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF 205
TPRAF L Y + AV F M + + N +L L ++ ++ A ++
Sbjct: 168 TPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIY 227
Query: 206 -KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
K D+V+ ++ ++ A+++ + + RG P + ++ ++ +
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKT 287
Query: 265 HQLREAWEFFLEMK-KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
L A + EM+ K TYT+++ F G ++++ RV DEMV G+ SV
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIA 347
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+L+ CK + + AL +F M +G P+ ++V++ C + +ME+A+E+ RM+
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 384 KHGIRPS---VQTY-------------------------------NVVIRYFCDAGEIEK 409
I PS V T N + FC G+++
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 410 GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTF 469
S + M PN+ YN ++ A R K+ DL A + EM+++G P FT+
Sbjct: 468 ATSFLKMMEQKGIE--PNVVFYNNMMLA-HCRMKNMDL--ARSIFSEMLEKGLEPNNFTY 522
Query: 470 NRVLNGLALTGNQEFAKEILR 490
+ +++G +++ A +++
Sbjct: 523 SILIDGFFKNKDEQNAWDVIN 543
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 127/316 (40%), Gaps = 39/316 (12%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
KA + ++L + Y S + + ID ++ D +A M + P F L
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFR 213
+ + + A+ + M + DL ++ ++D CK ++ A++LF
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF-------- 683
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
E+ E G+ P + YN+L+ G+ ++ A +
Sbjct: 684 --------------------------SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
+ +M D+ TYTTM+ G G + + ++ E++ G+VP + L+ L K
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
K A + EEM K PN+ Y+ VI G G++ A M + GI
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Query: 394 YNVVIRYFCDAGEIEK 409
+N+++ +G +EK
Sbjct: 838 FNLLV-----SGRVEK 848
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 171/393 (43%), Gaps = 41/393 (10%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A LV++M + + G A+ + M E + D+ ++ I+D
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LCK A LF + +V +YN + +G+C R A ++L++M ER I+P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++T+N L+ + +L EA + EM R D VTY +M++GF +K +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
D M P V T+N +I V C+ V + + E+ +G V N TYN +I G C
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE-------------- 415
++ A + M HG+ P T N+++ FC+ ++E+ L +FE
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 416 -----KMGDGS---------CS-----CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
M GS CS P++ TYNV+IS + D A L +
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD---ANVLFHK 597
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
M D G P T+N ++ G G + + E++
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 2/233 (0%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVL 239
D+ +FNTI+DV C+ KRV+ L + R ++ +YN + +G+C + A +
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+EM G+ P +T N LL G+ +L EA E F ++ K ++D V Y ++HG
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
+V ++ +F + G+ P V TYN +I C K + +A ++F +M G P+ +TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLS 412
N +IRG +G++++++E + M +G T +V D G ++K S
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD-GRLDKSFS 662
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 187/432 (43%), Gaps = 66/432 (15%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGP-TPRAFAIL 153
A+ FF ++ R + ++ I + RM A +L +M +RR P +F IL
Sbjct: 90 AIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKME-IRRIPLNIYSFNIL 147
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFR 213
+ + K ++ F + + G + D+ +FNT+L LC R+ A +LF
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF-------- 199
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
G+ + A+ + +M E G++P ++T+NTL+ G ++ EA
Sbjct: 200 -----------GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
+M + IDVVTY T+V+G G+ K + + +M + P V Y+A+I LCK
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG---DMERAVEYMGRME------- 383
+A +F EM+ KG PN+ TYN +I G C G D +R + M E
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 384 ---------KHG----------------IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
K G I P TYN +I FC + MF+ M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
P++ T+N +I ++ R K D +LL E+ RG + T+N +++G
Sbjct: 429 S------PDVVTFNTIID-VYCRAKRVD--EGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 479 TGNQEFAKEILR 490
N A+++ +
Sbjct: 480 VDNLNAAQDLFQ 491
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 145/296 (48%), Gaps = 21/296 (7%)
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
+V N + + + R +A+ + ++M R I + ++N L+K + CH+L + F
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 276 EMKKRKCEIDVVTYTTMVHG-------------FGVAGEVK--KSKRVFDEMVRAGLVPS 320
++ K + DVVT+ T++HG FG E ++ +FD+MV GL P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMG 380
V T+N LI LC + V A + +MVGKG ++ TY ++ G+C GD + A+ +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 381 RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFV 440
+ME+ I+P V Y+ +I C G +F +M + + PN+ TYN +I
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA--PNVFTYNCMIDGFCS 343
Query: 441 RKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSRC 495
+ D A +LL +M++R P TFN +++ G A+++ M RC
Sbjct: 344 FGRWSD---AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 3/290 (1%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
++ A L+ M P F L GK A ++ M D ++N+
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++ CK R + A +F D V++N I + +C KR +Q+L+E++ RG+
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASP---DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
TYNTL+ G+ L A + F EM D +T +++GF +++++
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+F+ + + + YN +I +CK V A +F + G P++ TYNV+I G C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+ A +M+ +G P TYN +IR AGEI+K + + +M
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 190/402 (47%), Gaps = 16/402 (3%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRG--PTPRAFAI 152
AL+FF DR Y H P + +++ ++ + + ++ M+ RRG TP AF+
Sbjct: 190 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMK--RRGIYRTPEAFSR 247
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GR 211
+ Y+ AG+ A++V M G +L NT +DV + R+E A + +
Sbjct: 248 VMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVG 307
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR--E 269
+ V+YN + G+C + R A+++L++M +G P V+Y T++ GY C + R E
Sbjct: 308 IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM-GYL-CKEKRIVE 365
Query: 270 AWEFFLEMKKRKCEI-DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
+ +M K + D VTY T++H ++ + G Y+A++
Sbjct: 366 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 425
Query: 329 QVLCKKDCVQNALLVFEEMVGKG-CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
LCK+ + A + EM+ KG C P++ TY V+ G C G++++A + + M HG
Sbjct: 426 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 485
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
+P+ +Y ++ C G+ + M + S PN TY+V++ + ++ L
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS--PNSITYSVIMHGL---RREGKL 540
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
A ++ EMV +GF P N +L L G A++ +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFM 582
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 142/327 (43%), Gaps = 13/327 (3%)
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKR 231
E G R D ++ I+ LCK R+ A L + C D V+Y + NG+C +
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
A ++L+ M G P V+Y LL G R + EA E ++ + +TY+
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++HG G++ ++ V EMV G P N L+Q LC+ A EE + KG
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
C N+ + VI G C + +++ A+ + M V TY ++ G I +
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
+ +KM P TY +I K +DLV +L +M+ R + +N+
Sbjct: 650 ELMKKMLHKGID--PTPVTYRTVIHRYCQMGKVDDLVA---ILEKMISRQKC--RTIYNQ 702
Query: 472 VLNGLALTGNQEFAK----EILRMQSR 494
V+ L + G E A ++LR SR
Sbjct: 703 VIEKLCVLGKLEEADTLLGKVLRTASR 729
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 168/416 (40%), Gaps = 44/416 (10%)
Query: 118 AIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHG 177
ID+ R A + RM+ + P + + Y + A+ + MH G
Sbjct: 283 TIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKG 342
Query: 178 CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMA 235
C D S+ TI+ LCK KR+ L K D V+YN + + A
Sbjct: 343 CLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA 402
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM-KKRKCEIDVVTYTTMVH 294
L LK+ E+G + Y+ ++ + ++ EA + EM K C DVVTYT +V+
Sbjct: 403 LWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 462
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC---------------------- 332
GF GEV K+K++ M G P+ +Y AL+ +C
Sbjct: 463 GFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSP 522
Query: 333 -------------KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
++ + A V EMV KG P N++++ LC G A ++M
Sbjct: 523 NSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFM 582
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMF 439
G +V + VI FC E++ LS+ + M + ++ TY L+ +
Sbjct: 583 EECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM--YLINKHADVFTYTTLVDTL- 639
Query: 440 VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSR 494
K + A +L+ +M+ +G P T+ V++ G + IL +M SR
Sbjct: 640 --GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 142/304 (46%), Gaps = 7/304 (2%)
Query: 196 KRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
+RV + + + R+R D + Y + K + +VL M RGI T ++
Sbjct: 187 ERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFS 246
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
++ Y R QLR+A + M++ E +++ T + F A ++K+ R + M
Sbjct: 247 RVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVV 306
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
G+VP+V TYN +I+ C V+ A+ + E+M KGC+P+ +Y ++ LC +
Sbjct: 307 GIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEV 366
Query: 376 VEYMGRMEK-HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
+ M +M K HG+ P TYN +I ++ L F K + L Y+ +
Sbjct: 367 RDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL-WFLKDAQEKGFRIDKL-GYSAI 424
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK-FTFNRVLNGLALTGNQEFAKEILRMQS 493
+ A+ K + A L+ EM+ +G P T+ V+NG G + AK++L++
Sbjct: 425 VHALC---KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 494 RCGH 497
GH
Sbjct: 482 THGH 485
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 175/417 (41%), Gaps = 57/417 (13%)
Query: 90 NHGPKALQFFKHLDRHPTYIH--SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRG--- 144
+H +AL F K I S HA+ RM + A L++ M L +G
Sbjct: 397 DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM---SEAKDLINEM--LSKGHCP 451
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT-KRVEMAHS 203
P + + + G+ +A ++ MH HG + + S+ +L+ +C+T K +E
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 204 LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ + + +S++Y++I +G + A V++EM +G P V N LL+ R
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+ EA +F E + C I+VV +TT++HGF E+ + V D+M V T
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY------------------------ 359
Y L+ L KK + A + ++M+ KG P TY
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Query: 360 ---------NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG----E 406
N VI LC G +E A +G++ + R +T ++ + G
Sbjct: 692 SRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSA 751
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
+ MF + + +P++ L + ++ K ++ A KL++ +V+RG +
Sbjct: 752 YKVACRMFNR------NLIPDVKMCEKLSKRLVLKGKVDE---ADKLMLRLVERGHI 799
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 171/393 (43%), Gaps = 41/393 (10%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A LV++M + + G A+ + M E + D+ ++ I+D
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LCK A LF + +V +YN + +G+C R A ++L++M ER I+P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++T+N L+ + +L EA + EM R D VTY +M++GF +K +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
D M P V T+N +I V C+ V + + E+ +G V N TYN +I G C
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE-------------- 415
++ A + M HG+ P T N+++ FC+ ++E+ L +FE
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 416 -----KMGDGS---------CS-----CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
M GS CS P++ TYNV+IS + D A L +
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD---ANVLFHK 597
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
M D G P T+N ++ G G + + E++
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVL 239
D+ +FNTI+DV C+ KRV+ L + R ++ +YN + +G+C + A +
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+EM G+ P +T N LL G+ +L EA E F ++ K ++D V Y ++HG
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
+V ++ +F + G+ P V TYN +I C K + +A ++F +M G P+ +TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
N +IRG +G++++++E + M +G T + C + E + +
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKIN 670
Query: 420 GSCSCLP 426
G S +P
Sbjct: 671 GETSSIP 677
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 187/432 (43%), Gaps = 66/432 (15%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGP-TPRAFAIL 153
A+ FF ++ R + ++ I + RM A +L +M +RR P +F IL
Sbjct: 90 AIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKME-IRRIPLNIYSFNIL 147
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFR 213
+ + K ++ F + + G + D+ +FNT+L LC R+ A +LF
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF-------- 199
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
G+ + A+ + +M E G++P ++T+NTL+ G ++ EA
Sbjct: 200 -----------GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
+M + IDVVTY T+V+G G+ K + + +M + P V Y+A+I LCK
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG---DMERAVEYMGRME------- 383
+A +F EM+ KG PN+ TYN +I G C G D +R + M E
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 384 ---------KHG----------------IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
K G I P TYN +I FC + MF+ M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
P++ T+N +I ++ R K D +LL E+ RG + T+N +++G
Sbjct: 429 S------PDVVTFNTIID-VYCRAKRVD--EGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 479 TGNQEFAKEILR 490
N A+++ +
Sbjct: 480 VDNLNAAQDLFQ 491
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 145/296 (48%), Gaps = 21/296 (7%)
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
+V N + + + R +A+ + ++M R I + ++N L+K + CH+L + F
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 276 EMKKRKCEIDVVTYTTMVHG-------------FGVAGEVK--KSKRVFDEMVRAGLVPS 320
++ K + DVVT+ T++HG FG E ++ +FD+MV GL P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMG 380
V T+N LI LC + V A + +MVGKG ++ TY ++ G+C GD + A+ +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 381 RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFV 440
+ME+ I+P V Y+ +I C G +F +M + + PN+ TYN +I
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA--PNVFTYNCMIDGFCS 343
Query: 441 RKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSRC 495
+ D A +LL +M++R P TFN +++ G A+++ M RC
Sbjct: 344 FGRWSD---AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 207/483 (42%), Gaps = 72/483 (14%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
EAL + ++ EL++ +L+RL + L+ F + + + + I +R R
Sbjct: 59 EALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRAR 118
Query: 127 DYTTAWTLVSRMRSLRRGP----------------TPRAFAILAERYAAAGKPHRAVRVF 170
+Y + + + +L +P F ++ + YA G A+ VF
Sbjct: 119 NYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVF 178
Query: 171 ISMHEHG-----------------------------------CRQDLNSFNTILDVLCKT 195
+M +G D+ + + +++ C++
Sbjct: 179 DNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRS 238
Query: 196 KRVEMAHSLFKTFRGRF--RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVT 253
V+ A K + V+YN + NG+ +I +VL+ M+ERG+S +VT
Sbjct: 239 GNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVT 298
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
Y +L+KGY + + EA F +K++K D Y ++ G+ G+++ + RV D M+
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI 358
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
G+ + N+LI CK + A +F M P+ +TYN ++ G C +G ++
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-------GDGSCSCLP 426
A++ +M + + P+V TYN++++ + G LS+++ M + SCS
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS--- 475
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
L+ A+F K D A KL ++ RG L T N +++GL AK
Sbjct: 476 ------TLLEALF---KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 487 EIL 489
EIL
Sbjct: 527 EIL 529
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ +L + Y G+ AVRV +M E G R + N++++ CK+ ++ A +F
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 210 G-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
+ D +YN + +G+C AL++ +M ++ + PT++TYN LLKGY R
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
+ + M KR D ++ +T++ G+ ++ ++++ ++ GL+ T N +I
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
LCK + V A + + + C P + TY + G G+++ A ME+ GI
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 389 PSVQTYNVVI 398
P+++ YN +I
Sbjct: 574 PTIEMYNTLI 583
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 177/411 (43%), Gaps = 57/411 (13%)
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFA--ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
D + W ++ L+RG + L E G + A++++ ++ G D +
Sbjct: 454 DVLSLWKMM-----LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV--SYNIIANGWCLIKRTPMALQVLKEM 242
N ++ LCK ++V A + FRC +Y +++G+ + A V + M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNV-NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
+GI PT+ YNTL+ G F+ L + + +E++ R V TY ++ G+ G +
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMI 627
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG------------- 349
K+ EM+ G+ +V + + L + D + A L+ +++V
Sbjct: 628 DKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKE 687
Query: 350 -------------------------KGCVPNLNTYNVVIRGLCHSGDMERAVE-YMGRME 383
K VPN YNV I GLC +G +E A + + +
Sbjct: 688 FLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLS 747
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
P TY ++I AG+I K ++ ++M +PN+ TYN LI + K
Sbjct: 748 SDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI--IPNIVTYNALIKGLC---K 802
Query: 444 SEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSR 494
++ A +LL ++ +G P T+N +++GL +GN E +R++ +
Sbjct: 803 LGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN---VAEAMRLKEK 850
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT-F 208
+ L + Y G A VF + E D + + ++D C+T ++ A +
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI 358
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
R ++ N + NG+C + A Q+ M + + P TYNTL+ GY R +
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
EA + +M +++ V+TY ++ G+ G ++ M++ G+ + + L+
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
+ L K A+ ++E ++ +G + + T NV+I GLC + A E + + +
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
P+VQTY + + G +++ ++ E M P ++ YN LIS F K L
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERK--GIFPTIEMYNTLISGAF---KYRHLN 593
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNG 475
L+IE+ RG P T+ ++ G
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITG 620
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 161/384 (41%), Gaps = 43/384 (11%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
PT + IL + Y+ G H + ++ M + G D S +T+L+ L K A L
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 205 FKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
++ R D+++ N++ +G C +++ A ++L + P + TY L GY++
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
L+EA+ M+++ + Y T++ G + K + E+ GL P+VAT
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR-- 381
Y ALI C + A EM+ KG N+N + + L ++ A + +
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Query: 382 -----------------------MEKHGIRPSVQT-------------YNVVIRYFCDAG 405
++ I SV+ YNV I C AG
Sbjct: 674 DFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAG 733
Query: 406 EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
++E +F + S +P+ TY +LI + + D+ A L EM +G +P
Sbjct: 734 KLEDARKLFSDLL-SSDRFIPDEYTYTILIHGCAI---AGDINKAFTLRDEMALKGIIPN 789
Query: 466 KFTFNRVLNGLALTGNQEFAKEIL 489
T+N ++ GL GN + A+ +L
Sbjct: 790 IVTYNALIKGLCKLGNVDRAQRLL 813
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 22/298 (7%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ I A + R LV +R+ PT + L + G +A M
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKR--- 231
E G ++N + I + L + +++ A L + V ++++ G+ +K
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQKI--------VDFDLLLPGYQSLKEFLE 690
Query: 232 ----TPMALQVLKEMAERG-----ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKC 282
T + Q + E E + P + YN + G + +L +A + F ++
Sbjct: 691 ASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR 750
Query: 283 EI-DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
I D TYT ++HG +AG++ K+ + DEM G++P++ TYNALI+ LCK V A
Sbjct: 751 FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM-EKHGIRPSVQTYNVVI 398
+ ++ KG PN TYN +I GL SG++ A+ +M EK +R S + +V I
Sbjct: 811 RLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDI 868
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 22/351 (6%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
+M A ++ + R P + + L+ Y G A V M G +
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEM 242
+NT++ K + + L R R +V +Y + GWC I A EM
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREA---------WEFFLEMKKRKCEIDVVTYTTMV 293
E+GI+ + + + FR ++ EA ++ L + E + TT +
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG-C 352
+A V+ S + LVP+ YN I LCK +++A +F +++
Sbjct: 698 KTQKIAESVENSTP------KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLS 412
+P+ TY ++I G +GD+ +A M GI P++ TYN +I+ C G +++
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 413 MFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
+ K+ + PN TYN LI + KS ++ A +L +M+++G +
Sbjct: 812 LLHKLPQKGIT--PNAITYNTLIDGLV---KSGNVAEAMRLKEKMIEKGLV 857
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 44/411 (10%)
Query: 110 HSPSGFEHAIDIAA--RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAV 167
H PS + + A R + + + +L+S++ P F + + +G +A+
Sbjct: 350 HKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAM 409
Query: 168 RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANG 225
++F M E GC+ ++FNT++ K ++E + L + + + NI+
Sbjct: 410 KIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQA 469
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR---------------------- 263
WC ++ A ++ +M G+ P +VT+NTL K Y R
Sbjct: 470 WCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKP 529
Query: 264 ------------CHQ--LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
C + + EA FF MK+ ++ + +++ GF ++ V
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
D M G+ P V T++ L+ ++ ++ +M+ G P+++ ++++ +G +
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G+ E+A + + +M K G+RP+V Y +I +C AGE++K + +++KM G PNL
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC-GIVGLSPNLT 708
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
TY LI K+ A +LL +M + +P + T + +G G
Sbjct: 709 TYETLIWGFGEAKQPWK---AEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 165/374 (44%), Gaps = 45/374 (12%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSY 219
G+P A +F ++ E G + L ++ T++ L + K SL K + + D++ +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR---------------- 263
N I N A+++ ++M E G PT T+NTL+KGY +
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 264 ------------------CHQ--LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
C+Q + EAW +M+ + DVVT+ T+ + G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 304 KSKR-VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
++ + M+ + P+V T ++ C++ ++ AL F M G PNL +N +
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSC 422
I+G + DM+ E + ME+ G++P V T++ ++ + G++++ ++ M +G
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 423 SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
P++ +++L + E A ++L +M G P + ++++G G
Sbjct: 633 D--PDIHAFSILAKGYARAGEPEK---AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEM 687
Query: 483 EFAKEILRMQSRCG 496
+ A ++ + CG
Sbjct: 688 KKAMQVYK--KMCG 699
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 152/311 (48%), Gaps = 8/311 (2%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDS-VSYNIIANGWCLIKRTPMALQVL 239
D+ S +++ L + R + AHS+F T S ++Y + K L ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
++ + G+ P + +N ++ L +A + F +MK+ C+ T+ T++ G+G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 300 GEVKKSKRVFDEMVRAGLV-PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
G++++S R+ D M+R ++ P+ T N L+Q C + ++ A + +M G P++ T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 359 YNVVIRGLCHSGDMERAVE-YMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+N + + G A + + RM + ++P+V+T ++ +C+ G++E+ L F +M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 418 GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA 477
+ PNL +N LI D+ G+++ M + G P TF+ ++N +
Sbjct: 558 KE--LGVHPNLFVFNSLIKGFL---NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 478 LTGNQEFAKEI 488
G+ + +EI
Sbjct: 613 SVGDMKRCEEI 623
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
DV + T +++G G +++ +F+ ++ G PS+ TY L+ L ++ + L +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
++ G P+ +N +I SG++++A++ +M++ G +P+ T+N +I+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G++E+ + + M PN T N+L+ A ++K E+ A ++ +M G P
Sbjct: 438 GKLEESSRLLDMMLRDEM-LQPNDRTCNILVQAWCNQRKIEE---AWNIVYKMQSYGVKP 493
Query: 465 RKFTFNRVLNGLALTGNQEFAKEIL 489
TFN + A G+ A++++
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMI 518
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 203/455 (44%), Gaps = 56/455 (12%)
Query: 72 SPFRW----TPELVDEVLKRLWNHGPKALQFFKHL-DRHPTYIHSPSGFEHAIDIAARMR 126
S RW TP L+ ++LK+ N AL+ F+ +R P+Y H+ S + IDI +
Sbjct: 2 SVVRWPRVLTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSN 60
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
++ RM+ FA + ++ AG+ A+ +F S+HE C SF+
Sbjct: 61 RVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFD 120
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGRFRCDS--VSYNIIANGWCLIKRTPMALQVLKEMAE 244
T+L + K +E A +F+ + + +S + N++ C + R+ +A QV +EM
Sbjct: 121 TLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNY 180
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREA----WEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
+G P +Y L+KG+ +L EA + F + ++ D+V Y ++ AG
Sbjct: 181 QGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAG 240
Query: 301 EVKKSKRVFDEMVRAGL-------------------------------------VPSVAT 323
EV + + +++R GL +P + +
Sbjct: 241 EVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDS 300
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR-- 381
Y+A+ L ++ + V M KG P Y ++ LC +G ++ AV + +
Sbjct: 301 YSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M+ H + P+V YNV+I+ CD G+ + + +KM SC+ N +TY L+ +
Sbjct: 361 MQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK-QVSCVANEETYQTLVDGLC-- 416
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+ + A +++ EM+ + P T++ ++ GL
Sbjct: 417 -RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 125/285 (43%), Gaps = 15/285 (5%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISM----HEHGCRQDLNSFNTILDVLCKTKRVEM 200
P ++ IL + + GK A + SM + G +D+ + +LD LC V+
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 201 AHSLF-KTFRGRFRCDSVSYNIIANG-WCL----IKRTPMALQVLKEMAERGISPTMVTY 254
A + K R + Y+ I G W I+R ++L E RG P + +Y
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVK---RLLTETLIRGAIPCLDSY 301
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD-EMV 313
+ + F +L E E L M+ + E Y V AG++K++ V + EM+
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-GCVPNLNTYNVVIRGLCHSGDM 372
+ +P+V YN LI+ LC A+ ++M + CV N TY ++ GLC G
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
A + M M P V+TY+++I+ CD + + E+M
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ---VLKEMAERGI 247
+L K K A LF+ + RF + ++ A ++ ++ L+ V++ M E
Sbjct: 18 ILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSC 77
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+ ++++ + R +L +A F + + C +++ T++ E++ +
Sbjct: 78 ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACH 137
Query: 308 VFDEMVRAGLVPS-VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+F + V S + N L++VLC+ + A VF+EM +GC P+ ++Y ++++G
Sbjct: 138 IFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGF 197
Query: 367 CHSGDMERAVEYM----GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM----- 417
C G +E A + R+ + G + Y +++ CDAGE++ + + K+
Sbjct: 198 CLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 418 ------------GDGSCS------------------CLPNLDTYNVLISAMFVRKKSEDL 447
G S +P LD+Y+ + + +F K L
Sbjct: 258 KAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGK---L 314
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHAL 499
V ++L+ M +GF P F + + L G + A ++ + GH L
Sbjct: 315 VEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 182 LNSFNTI-LDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVL- 239
L+S++ + D+ + K VE L F Y C + A+ V+
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR-KCEIDVVTYTTMVHGFGV 298
KEM + PT+ YN L+KG + EA + +M K+ C + TY T+V G
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
G+ ++ +V +EM+ P V TY+ +I+ LC D A++ EEMV + VP +
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 359 YNVVIRGLC 367
+ + +C
Sbjct: 478 WKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 203/455 (44%), Gaps = 56/455 (12%)
Query: 72 SPFRW----TPELVDEVLKRLWNHGPKALQFFKHL-DRHPTYIHSPSGFEHAIDIAARMR 126
S RW TP L+ ++LK+ N AL+ F+ +R P+Y H+ S + IDI +
Sbjct: 2 SVVRWPRVLTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSN 60
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
++ RM+ FA + ++ AG+ A+ +F S+HE C SF+
Sbjct: 61 RVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFD 120
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGRFRCDS--VSYNIIANGWCLIKRTPMALQVLKEMAE 244
T+L + K +E A +F+ + + +S + N++ C + R+ +A QV +EM
Sbjct: 121 TLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNY 180
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREA----WEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
+G P +Y L+KG+ +L EA + F + ++ D+V Y ++ AG
Sbjct: 181 QGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAG 240
Query: 301 EVKKSKRVFDEMVRAGL-------------------------------------VPSVAT 323
EV + + +++R GL +P + +
Sbjct: 241 EVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDS 300
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR-- 381
Y+A+ L ++ + V M KG P Y ++ LC +G ++ AV + +
Sbjct: 301 YSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M+ H + P+V YNV+I+ CD G+ + + +KM SC+ N +TY L+ +
Sbjct: 361 MQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK-QVSCVANEETYQTLVDGLC-- 416
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+ + A +++ EM+ + P T++ ++ GL
Sbjct: 417 -RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 125/285 (43%), Gaps = 15/285 (5%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISM----HEHGCRQDLNSFNTILDVLCKTKRVEM 200
P ++ IL + + GK A + SM + G +D+ + +LD LC V+
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 201 AHSLF-KTFRGRFRCDSVSYNIIANG-WCL----IKRTPMALQVLKEMAERGISPTMVTY 254
A + K R + Y+ I G W I+R ++L E RG P + +Y
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVK---RLLTETLIRGAIPCLDSY 301
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD-EMV 313
+ + F +L E E L M+ + E Y V AG++K++ V + EM+
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-GCVPNLNTYNVVIRGLCHSGDM 372
+ +P+V YN LI+ LC A+ ++M + CV N TY ++ GLC G
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
A + M M P V+TY+++I+ CD + + E+M
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ---VLKEMAERGI 247
+L K K A LF+ + RF + ++ A ++ ++ L+ V++ M E
Sbjct: 18 ILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSC 77
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+ ++++ + R +L +A F + + C +++ T++ E++ +
Sbjct: 78 ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACH 137
Query: 308 VFDEMVRAGLVPS-VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+F + V S + N L++VLC+ + A VF+EM +GC P+ ++Y ++++G
Sbjct: 138 IFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGF 197
Query: 367 CHSGDMERAVEYM----GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM----- 417
C G +E A + R+ + G + Y +++ CDAGE++ + + K+
Sbjct: 198 CLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 418 ------------GDGSCS------------------CLPNLDTYNVLISAMFVRKKSEDL 447
G S +P LD+Y+ + + +F K L
Sbjct: 258 KAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGK---L 314
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHAL 499
V ++L+ M +GF P F + + L G + A ++ + GH L
Sbjct: 315 VEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 182 LNSFNTI-LDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVL- 239
L+S++ + D+ + K VE L F Y C + A+ V+
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR-KCEIDVVTYTTMVHGFGV 298
KEM + PT+ YN L+KG + EA + +M K+ C + TY T+V G
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
G+ ++ +V +EM+ P V TY+ +I+ LC D A++ EEMV + VP +
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 359 YNVVIRGLC 367
+ + +C
Sbjct: 478 WKALAESVC 486
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 4/288 (1%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF--RCDSVS 218
G+ A + + E D ++N +L LCK K + + + R F + D VS
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 219 YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
+ I+ + C K A+ ++ ++ G P YNT++KG+ + EA + +MK
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+ E D +TY T++ G AG V++++ MV AG P ATY +L+ +C+K
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
AL + EEM +GC PN TYN ++ GLC + M++ +E M+ G++ Y ++
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
R +G++ + +F+ D L + Y+ L + + KK+++
Sbjct: 413 RSLVKSGKVAEAYEVFDYAVDS--KSLSDASAYSTLETTLKWLKKAKE 458
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 17/278 (6%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNI 221
+P R+ F+ + H CR +S + + VL +L D V+ +I
Sbjct: 119 RPGRST--FLILLSHACRAPDSSISNVHRVL----------NLM--VNNGLEPDQVTTDI 164
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR- 280
C R A ++KE+ E+ P TYN LLK +C L +EF EM+
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
+ D+V++T ++ + ++++ + ++ AG P YN +++ C A
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
+ V+++M +G P+ TYN +I GL +G +E A Y+ M G P TY ++
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
C GE LS+ E+M C+ PN TYN L+ +
Sbjct: 345 MCRKGESLGALSLLEEMEARGCA--PNDCTYNTLLHGL 380
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID ++ A LVS++ + P + + + + K AV V+ M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTP 233
E G D ++NT++ L K RVE A KT + D+ +Y + NG C +
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
AL +L+EM RG +P TYNTLL G + + + E + MK +++ Y T+V
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
+G+V ++ VFD V + + + Y+ L L
Sbjct: 413 RSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 283 EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL 342
E D VT V G V ++K + E+ P TYN L++ LCK +
Sbjct: 156 EPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYE 215
Query: 343 VFEEMVGKGCV-PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
+EM V P+L ++ ++I +C+S ++ A+ + ++ G +P YN +++ F
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
C + + + +++KM + P+ TYN LI F K+ + A L MVD G
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVE--PDQITYNTLI---FGLSKAGRVEEARMYLKTMVDAG 330
Query: 462 FLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSR 494
+ P T+ ++NG+ G A +L M++R
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
RV + MV GL P T + ++ LC+ V A + +E+ K P+ TYN +++ L
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 367 CHSGDMERAVEYMGRM-EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
C D+ E++ M + ++P + ++ ++I C++ + + + + K+G+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK-- 262
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
P+ YN ++ K + V K +M + G P + T+N ++ GL+ G E A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYK---KMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 486 KEILRMQSRCGH 497
+ L+ G+
Sbjct: 320 RMYLKTMVDAGY 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 258 LKGYFRCHQLREAWEFFLEMKK-RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA- 315
L+ F+ L +A F + + +D+ + +++ +G V + ++F ++++
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 316 -GLVPSVATYNALIQVLCK--KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
P +T+ L+ C+ + N V MV G P+ T ++ +R LC +G +
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
+ A + M + + P TYN ++++ C ++ ++M D P+L ++
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD-DFDVKPDLVSFT 234
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+LI + S++L A L+ ++ + GF P F +N ++ G
Sbjct: 235 ILIDNVC---NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 3/313 (0%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
Y+ L+ M SL P + I K A ++F M +HG +L +++
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 188 ILDVLCKTKRVEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG 246
++D CKT V A+ L+K + V + + +G+C + A + M + G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
+ P + YN L+ G+ + + EA EM+ DV TYT +++G + +V ++
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
R+F +M + PS ATYN+LI CK+ ++ AL + EM G PN+ T++ +I G
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C+ D++ A+ M GI P V TY +I +++ L ++ M + P
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH--P 512
Query: 427 NLDTYNVLISAMF 439
N T+ L+ +
Sbjct: 513 NDHTFACLVDGFW 525
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 169/376 (44%), Gaps = 7/376 (1%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA 149
N +A + F+ + +H + + + ID + + A+ L + P
Sbjct: 248 NKMEEAEKMFELMKKHGV-LPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
F L + + A + A +F+ M + G +L +N ++ CK+ + A L
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 210 G-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
D +Y I+ NG C+ + A ++ ++M I P+ TYN+L+ GY + + +
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
+A + EM E +++T++T++ G+ ++K + ++ EM G+VP V TY ALI
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
K+ ++ AL ++ +M+ G PN +T+ ++ G G + A+++ +
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC 546
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
+ + +I C G I + F M SC P++ +Y ++ K+ D +
Sbjct: 547 WNHVGFTCLIEGLCQNGYILRASRFFSDM--RSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 449 VAGKLLIEMVDRGFLP 464
+ L +M+ G LP
Sbjct: 605 M---LQCDMIKTGILP 617
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 25/319 (7%)
Query: 180 QDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNI---IANGWCLIKRTPMAL 236
DL SF+ ++ VL + +A L K+ R + S N+ + N I+ ++
Sbjct: 73 NDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSI 132
Query: 237 QV----LKEMAERGI-------------SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
V + E E G+ SP ++L G R + W + M
Sbjct: 133 GVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMIS 192
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
R DV Y + G K +++ DEM G+ P+V Y I LC+ + ++
Sbjct: 193 RGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEE 252
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
A +FE M G +PNL TY+ +I G C +G++ +A + + P+V + ++
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 400 YFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD 459
FC A E+ S+F M PNL YN LI KS +++ A LL EM
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVD--PNLYVYNCLIHG---HCKSGNMLEAVGLLSEMES 367
Query: 460 RGFLPRKFTFNRVLNGLAL 478
P FT+ ++NGL +
Sbjct: 368 LNLSPDVFTYTILINGLCI 386
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M RG+ P + Y L + F+ + + EM + +V YT + +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+++++++F+ M + G++P++ TY+A+I CK V+ A +++E++ +PN+ +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
++ G C + ++ A M K G+ P++ YN +I C +G + + + + +M +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
S P++ TY +LI+ + + + + A +L +M + P T+N +++G N
Sbjct: 370 LS--PDVFTYTILINGLCIEDQVAE---ANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 482 QEFAKEI 488
E A ++
Sbjct: 425 MEQALDL 431
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 151/323 (46%), Gaps = 2/323 (0%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
A + F + + P + HS S I R R + ++++ RS T F L
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTK-RVEMAHSLFKTFRGR-F 212
+ YA A P + + F M E N ILDVL + ++ A LFK+ R
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGV 186
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
++ SYN++ +CL +A Q+ +M ER + P + +Y L++G+ R Q+ A E
Sbjct: 187 MPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME 246
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
+M + D ++YTT+++ +++++ ++ M G P + YN +I C
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFC 306
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
++D +A V ++M+ GC PN +Y +I GLC G + +Y+ M G P
Sbjct: 307 REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 366
Query: 393 TYNVVIRYFCDAGEIEKGLSMFE 415
N +++ FC G++E+ + E
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVVE 389
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 136/297 (45%), Gaps = 2/297 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFA-ILAERYAAAGKPHRAVRVFISM 173
F + I + A + + +M P P+ IL + G +A +F S
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRT 232
HG + S+N ++ C + +A+ LF K D SY I+ G+C +
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
A+++L +M +G P ++Y TLL R QLREA++ MK + C D+V Y TM
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 293 VHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
+ GF +++V D+M+ G P+ +Y LI LC + EEM+ KG
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
P+ + N +++G C G +E A + + + K+G T+ +VI C+ E EK
Sbjct: 362 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 4/303 (1%)
Query: 98 FFKHLDRHPTYIHSPSGFEHAIDIAARMRDY-TTAWTLVSRMRSLRRGPTPRAFAILAER 156
F+K L+ + + P +D+ R Y A+ L R P R++ +L +
Sbjct: 142 FYKMLEFN--FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQA 199
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCD 215
+ A ++F M E D++S+ ++ C+ +V A L + F D
Sbjct: 200 FCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
+SY + N C + A ++L M +G +P +V YNT++ G+ R + +A +
Sbjct: 260 RLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLD 319
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
+M C + V+Y T++ G G + K+ +EM+ G P + N L++ C
Sbjct: 320 DMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFG 379
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
V+ A V E ++ G + +T+ +VI +C+ + E+ ++ K I + +
Sbjct: 380 KVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVD 439
Query: 396 VVI 398
V I
Sbjct: 440 VGI 442
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 16/271 (5%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLL------KGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
L +M E +P N +L +GY L++A+E F + + +
Sbjct: 138 VLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY-----LQKAFELFKSSRLHGVMPNTRS 192
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y ++ F + ++ + ++F +M+ +VP V +Y LIQ C+K V A+ + ++M+
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
KG VP+ +Y ++ LC + A + + RM+ G P + YN +I FC
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 409 KGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
+ + M CS PN +Y LI + + ++ K L EM+ +GF P
Sbjct: 313 DARKVLDDMLSNGCS--PNSVSYRTLIGGLCDQGMFDE---GKKYLEEMISKGFSPHFSV 367
Query: 469 FNRVLNGLALTGNQEFAKEILRMQSRCGHAL 499
N ++ G G E A +++ + + G L
Sbjct: 368 SNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 164/353 (46%), Gaps = 14/353 (3%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ I+ + RD++ ++ M+ + +L E GK A ++F M
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E G D++ + +++ C+ ++ A LF + S +Y + +G C +
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A ++ EM +G++ T V +NTL+ GY R + EA + M+++ + DV T T+
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
F ++K+ M+ G+ S +Y LI V CK+ V+ A +F EM KG
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
PN TYNV+I C G ++ A + ME +G+ P TY +I C A +++ + +
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Query: 414 FEKMGDGSCSCLPNLD----TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
F +MG L LD TY V+IS + KS++ A L EM +G+
Sbjct: 562 FSEMG------LKGLDQNSVTYTVMISGLSKAGKSDE---AFGLYDEMKRKGY 605
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 48/380 (12%)
Query: 157 YAAAGKPHRAV----RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR- 211
+ A K R + +F M + G + + S +++ LC+ VE + L K F +
Sbjct: 195 FLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG 254
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
+ ++ +YN I N + + VLK M + G+ VTY L++ + ++ +A
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAE 314
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
+ F EM++R E DV YT+++ G +K++ +FDE+ GL PS TY ALI +
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV--------------- 376
CK + A ++ EM KG +N +I G C G ++ A
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434
Query: 377 --------------------EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
+++ RM + G++ S +Y +I +C G +E+ +F +
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
M S PN TYNV+I A + K ++ A KL M G P +T+ +++G
Sbjct: 495 M--SSKGVQPNAITYNVMIYAYCKQGKIKE---ARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 477 ALTGNQEFAKEILRMQSRCG 496
+ N E +R+ S G
Sbjct: 550 CIADN---VDEAMRLFSEMG 566
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A+ L + P+ + L + G+ A + M G FNT++D
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ V+ A ++ + F+ D + N IA+ + +KR A Q L M E G+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+ V+Y L+ Y + + EA F+EM + + + +TY M++ + G++K+++++
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
M G+ P TY +LI C D V A+ +F EM KG N TY V+I GL +
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
G + A M++ G + Y +I
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
G ++ RVFD MV+ GL + + K+ + L +F MV G + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC---DAGEIEKGLSMFEK 416
+V+ GLC G++E++ + + GI+P TYN +I + D +E L + +K
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
G + N TY +L+ K D A KL EM +RG
Sbjct: 288 DG-----VVYNKVTYTLLMELSVKNGKMSD---AEKLFDEMRERGI 325
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 148/288 (51%), Gaps = 3/288 (1%)
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KT 207
F L + + + A++VF M +G + D+ +F T++ V R+E A LF +
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 208 FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
F+ D+++Y + + +C + + LQ+ M IS + N ++ F+CH++
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
+A +FF + + K E D+VTY TM+ G+ + +++R+F+ + P+ T L
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
I VLCK + + A+ +F M KG PN TY ++ S D+E + + M++ GI
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
PS+ +Y+++I C G +++ ++F + D LP++ Y +LI
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA--KLLPDVVAYAILI 783
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 144/289 (49%), Gaps = 5/289 (1%)
Query: 134 LVSRMRSLRR--GPTPRA--FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTIL 189
+ SR+ SL GP P F L + G+ RA +F M + G DL +++T++
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 190 DVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS 248
D K + M H LF + + D V ++ + + A V K M +GIS
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P +VTY L+KG + ++ EA+ + ++ KR E +VTY++++ GF G ++ +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
+++M++ G P V Y L+ L K+ + +A+ +M+G+ N+ +N +I G C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+ A++ M +GI+P V T+ V+R G +E+ L +F +M
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 16/341 (4%)
Query: 142 RRGPTPR--AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
+RG P A++ L + Y AG ++F G + D+ F++ +DV K+ +
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 200 MAHSLFKTFRGRFRCDSVS-----YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
A ++K R C +S Y I+ G C R A + ++ +RG+ P++VTY
Sbjct: 374 TASVVYK----RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
++L+ G+ +C LR + + +M K DVV Y +V G G + + R +M+
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
+ +V +N+LI C+ + AL VF M G P++ T+ V+R G +E
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
A+ RM K G+ P Y +I FC + GL +F+ M S ++ NV+
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS--ADIAVCNVV 607
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
I +F + ED A K +++ P T+N ++ G
Sbjct: 608 IHLLFKCHRIED---ASKFFNNLIEGKMEPDIVTYNTMICG 645
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 147/285 (51%), Gaps = 6/285 (2%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
FR VS N + G + + +A ++L + + G +P +VT+ TL+ G+ + ++ A+
Sbjct: 248 FRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
+ F M++R E D++ Y+T++ G+ AG + ++F + + G+ V +++ I V
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
K + A +V++ M+ +G PN+ TY ++I+GLC G + A G++ K G+ PS+
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
TY+ +I FC G + G +++E M P++ Y VL+ + K ++ A
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP--PDVVIYGVLVDGL---SKQGLMLHAM 481
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+ ++M+ + FN +++G + A ++ R+ G
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L RM + P A+ L + + KP +++F M + D+ N ++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 191 VLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+L K R+E A F G+ D V+YN + G+C ++R A ++ + + P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
VT L+ + + + A F M ++ + + VTY ++ F + +++ S ++F
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+EM G+ PS+ +Y+ +I LCK+ V A +F + + +P++ Y ++IRG C
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 370 GDMERAVEYMGRMEKHGIRPS 390
G + A M ++G++P
Sbjct: 790 GRLVEAALLYEHMLRNGVKPD 810
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
I + + D A + S M P + L + ++ + + ++F M E G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+ S++ I+D LCK RV+ A ++F + + D V+Y I+ G+C + R A
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 238 VLKEMAERGISP 249
+ + M G+ P
Sbjct: 798 LYEHMLRNGVKP 809
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 176/387 (45%), Gaps = 24/387 (6%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
+ I R Y+ A L+ ++ RA+ + Y+ GK +A+ +F M E G
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 179 RQDLNSFNTILDVLCKTKRV---------EMAHSLFKTFRGRFRCDSVSYNIIANGWCLI 229
L ++N ILDV K R EM K F C +V G L+
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF--DEFTCSTVLSACAREG--LL 297
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
+ A + E+ G P VTYN LL+ + + EA EM++ C D VTY
Sbjct: 298 RE---AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
+V + AG K++ V + M + G++P+ TY +I K AL +F M
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
GCVPN TYN V+ L ++ + M+ +G P+ T+N ++ C ++K
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDK 473
Query: 410 GLS-MFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
++ +F +M SC P+ DT+N LISA + R SE V A K+ EM GF T
Sbjct: 474 FVNRVFREM--KSCGFEPDRDTFNTLISA-YGRCGSE--VDASKMYGEMTRAGFNACVTT 528
Query: 469 FNRVLNGLALTGNQEFAKEILR-MQSR 494
+N +LN LA G+ + ++ M+S+
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSK 555
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 159/346 (45%), Gaps = 17/346 (4%)
Query: 160 AGKPHRAVRVF----ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRC 214
+G RAV +F +S + + D + +L + + +A L K +
Sbjct: 149 SGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLL 208
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D +Y I + + + A+ + + M E G SPT+VTYN +L + ++ +W
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF---GKMGRSWRKI 265
Query: 275 L----EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQV 330
L EM+ + + D T +T++ G ++++K F E+ G P TYNAL+QV
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 331 LCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
K AL V +EM C + TYN ++ +G + A + M K G+ P+
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVA 450
TY VI + AG+ ++ L +F M + C +PN TYN ++S + + +S +++
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGC--VPNTCTYNAVLSLLGKKSRSNEMI-- 441
Query: 451 GKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
K+L +M G P + T+N +L G +F + R CG
Sbjct: 442 -KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 180/394 (45%), Gaps = 31/394 (7%)
Query: 97 QFFKHLDRHPTYIHSPS---GFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
++ + + T +H+ S +E AID+ RM++ + TLV+ + ++
Sbjct: 205 EYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVT-------------YNVI 251
Query: 154 AERYAAAGKPHRAV-RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-R 211
+ + G+ R + V M G + D + +T+L + + A F +
Sbjct: 252 LDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG 311
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
+ +V+YN + + AL VLKEM E VTYN L+ Y R +EA
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
M K+ + +TYTT++ +G AG+ ++ ++F M AG VP+ TYNA++ +L
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR-MEKHGIRPS 390
KK + + +M GC PN T+N ++ LC + M++ V + R M+ G P
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKM---GDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
T+N +I + G M+ +M G +C + TYN L++A+ + D
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC-----VTTYNALLNAL---ARKGDW 542
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
++ +M +GF P + +++ +L A GN
Sbjct: 543 RSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 144/318 (45%), Gaps = 7/318 (2%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDS-VSYNIIANGWCLIKRT-PMALQV 238
D+ ++ TIL +T + E A LF+ + + V+YN+I + + + R+ L V
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
L EM +G+ T +T+L R LREA EFF E+K E VTY ++ FG
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
AG ++ V EM TYN L+ + + A V E M KG +PN T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
Y VI +G + A++ M++ G P+ TYN V+ + + M M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
CS PN T+N +++ K D V ++ EM GF P + TFN +++
Sbjct: 449 SNGCS--PNRATWNTMLA--LCGNKGMDKFV-NRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 479 TGNQEFAKEILRMQSRCG 496
G++ A ++ +R G
Sbjct: 504 CGSEVDASKMYGEMTRAG 521
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 127/270 (47%), Gaps = 1/270 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ++ AR D+ + ++S M+S PT +++++ + YA G R+ +
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E T+L K + + + F F+ ++ D V +N + + +
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
A +L+ + E G+SP +VTYN+L+ Y R + +A E ++K + + D+V+Y T++
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
GF G ++++ R+ EM G+ P + TYN + V E M C
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
PN T+ +V+ G C +G A++++ +++
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 128/301 (42%), Gaps = 3/301 (0%)
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
M+S P F L Y G A +++ M G + ++N +L+ L +
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 541
Query: 198 VEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
++ + + F+ SY+++ + ++ + E I P+ + T
Sbjct: 542 WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
LL F+C L + F KK + D+V + +M+ F +++ + + + G
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 317 LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
L P + TYN+L+ + ++ A + + + P+L +YN VI+G C G M+ AV
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLIS 436
+ M + GIRP + TYN + + G + + E M C PN T+ +++
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR--PNELTFKMVVD 779
Query: 437 A 437
Sbjct: 780 G 780
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 160/409 (39%), Gaps = 107/409 (26%)
Query: 142 RRGPTPRA--FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
++G P A + + + Y AGK A+++F SM E GC + ++N +L +L K R
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR-- 436
Query: 200 MAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
+ +++L +M G SP T+NT+L
Sbjct: 437 --------------------------------SNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
+ F EMK E D T+ T++ +G G + +++ EM RAG
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD---MERAV 376
V TYNAL+ L +K ++ V +M KG P +Y+++++ G+ +ER
Sbjct: 525 CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE 584
Query: 377 EYMGR--------------------------------MEKHGIRPSVQTYNVVIRYFCDA 404
+ +KHG +P + +N ++ F
Sbjct: 585 NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRK----KSEDL------------- 447
++ + E + + S P+L TYN L+ M+VR+ K+E++
Sbjct: 645 NMYDQAEGILESIREDGLS--PDLVTYNSLMD-MYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 448 -----VVAG-----------KLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
V+ G ++L EM +RG P FT+N ++G G
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 155/399 (38%), Gaps = 47/399 (11%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A + ++S P + L + + AG A+ V M E+ C D ++N ++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 191 VLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+ + A + + + ++++Y + + + + AL++ M E G P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
TYN +L + + E + +MK C + T+ TM+ G G K RVF
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
EM G P T+N LI + +A ++ EM G + TYN ++ L
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI---------------------- 407
GD + M+ G +P+ +Y+++++ + G
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 408 ----------------EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
E+ ++F+K G P++ +N ++S +F R D A
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYK-----PDMVIFNSMLS-IFTRNNMYD--QAE 651
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+L + + G P T+N +++ G A+EIL+
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 165/354 (46%), Gaps = 7/354 (1%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
R ++ A + S + P ++IL + A+ V M +
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKE 241
+ TI++ LCK + A L R +SYN I +G+ A+ +E
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M GISP ++TY +L+ G + +++ +A E EMK + ++D+ Y ++ GF
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
++ + +F E++ GL PS YN+LI + AL ++++M+ G +L TY
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I GL G++ A E M+ G+ P Y V++ G+ K + MFE+M +
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+ PN+ YN +I+ + + +L A +L EM+D+G LP TF+ +++G
Sbjct: 790 VT--PNVLIYNAVIAGHY---REGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 8/363 (2%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
T A L SRM ++ +L KP A+ V E G D ++
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA 274
Query: 189 LDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM--ALQVLKEMAERG 246
+ CKT + MA+SL + + + C + +K+ M A+++ EM G
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
IS +V +L+ G+ + + L A F +M+K + VT++ ++ F GE++K+
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+ +M GL PSV + +IQ K + AL +F+E G + N+ N ++ L
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWL 453
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C G + A E + +ME GI P+V +YN V+ C ++ +F + + P
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK--P 511
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
N TY++LI F ++ D A +++ M + ++NGL G A+
Sbjct: 512 NNYTYSILIDGCF---RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 487 EIL 489
E+L
Sbjct: 569 ELL 571
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 179/388 (46%), Gaps = 16/388 (4%)
Query: 109 IHSPSGFEHAIDIAARMRDYTT----AWTLVSRM----RSLRRGPTPRAFAILAERYAAA 160
+ SP + A D+ R + A LVS++ +S RAF L Y+
Sbjct: 117 VSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKD 176
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSY 219
+ AV + M E N L L + + A L+ D+V+
Sbjct: 177 RQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT 236
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
++ ++ AL+VL ERG P + Y+ ++ + L A EMK+
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 280 RK-CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+K C TYT+++ G + + R+ DEM+ G+ +V +LI CK + +
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
+AL++F++M +G PN T++V+I +G+ME+A+E+ +ME G+ PSV + +I
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
+ + + E+ L +F++ + + L N+ N ++S + + K+++ A +LL +M
Sbjct: 417 QGWLKGQKHEEALKLFDESFE---TGLANVFVCNTILSWLCKQGKTDE---ATELLSKME 470
Query: 459 DRGFLPRKFTFNRVLNGLALTGNQEFAK 486
RG P ++N V+ G N + A+
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLAR 498
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 148/331 (44%), Gaps = 8/331 (2%)
Query: 112 PSGFEHAIDIAA--RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
P+ + ++I I R D A +V+ M S + + G+ +A +
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 170 FISMHEHG--CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGW 226
+M E C + S+N+I+D K ++ A + ++ G + ++Y + NG
Sbjct: 571 LANMIEEKRLCVSCM-SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
C R AL++ EM +G+ + Y L+ G+ + + A F E+ +
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
Y +++ GF G + + ++ +M++ GL + TY LI L K + A ++ E
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M G VP+ Y V++ GL G + V+ M+K+ + P+V YN VI G
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISA 437
+++ + ++M D LP+ T+++L+S
Sbjct: 810 LDEAFRLHDEMLDK--GILPDGATFDILVSG 838
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 100/286 (34%), Gaps = 41/286 (14%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
F +S ++N + N + ++T A+ ++ +M E + P N L + + L EA
Sbjct: 159 FEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAK 218
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
E + M + D VT ++ + ++ V + G P Y+ +Q
Sbjct: 219 ELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 332 CKKDCVQNALLVFEEMVGKG-CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
CK + A + EM K CVP+ TY VI G+M+ A+ M GI +
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVA 450
V +I C K+ DLV A
Sbjct: 339 VVAATSLITGHC----------------------------------------KNNDLVSA 358
Query: 451 GKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
L +M G P TF+ ++ G E A E + G
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 1/245 (0%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIAN 224
A +F M QD+ S+NT+LD +CK ++++A + R + VSY+ + +
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
G+ R AL + EM GI+ V+YNTLL Y + + EA + EM +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
DVVTY ++ G+G G+ + K+VF EM R ++P++ TY+ LI K + A+ +F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
E G ++ Y+ +I LC +G + AV + M K GI P+V TYN +I F +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 405 GEIEK 409
+++
Sbjct: 598 ATMDR 602
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 97 QFFKHLDRH---PTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
+FF + R+ P I F + + +R + A L M + R ++ L
Sbjct: 325 KFFDEMQRNGVQPDRIT----FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RF 212
+ G+ A + M ++ S++T++D K R + A +LF R
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
D VSYN + + + + R+ AL +L+EMA GI +VTYN LL GY + + E +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
F EMK+ +++TY+T++ G+ G K++ +F E AGL V Y+ALI LC
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
K V +A+ + +EM +G PN+ TYN +I S M+R+ +Y
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 152/340 (44%), Gaps = 40/340 (11%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT----KRV- 198
G T AF+ L Y +G A+ VF SM E+G R +L ++N ++D K K+V
Sbjct: 265 GNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA 324
Query: 199 -------------------------------EMAHSLFKTFRGR-FRCDSVSYNIIANGW 226
E A +LF R D SYN + +
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
C + +A ++L +M + I P +V+Y+T++ G+ + + EA F EM+ +D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
V+Y T++ + G +++ + EM G+ V TYNAL+ K+ VF E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M + +PNL TY+ +I G G + A+E + G+R V Y+ +I C G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
+ +S+ ++M S PN+ TYN +I A F R + D
Sbjct: 565 VGSAVSLIDEMTKEGIS--PNVVTYNSIIDA-FGRSATMD 601
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 146/307 (47%), Gaps = 7/307 (2%)
Query: 186 NTILDVLCKTKRVEMAHSLFKT-FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
+ ++ L + +V +A +F+T F G + +++ + + + A+ V M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 245 RGISPTMVTYNTLLKGYFRCH-QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
G+ P +VTYN ++ + + ++ +FF EM++ + D +T+ +++ G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++ +FDEM + V +YN L+ +CK + A + +M K +PN+ +Y+ VI
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
G +G + A+ G M GI +YN ++ + G E+ L + +M S
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM--ASVG 474
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
++ TYN L+ + K +++ K+ EM LP T++ +++G + G +
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEV---KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 484 FAKEILR 490
A EI R
Sbjct: 532 EAMEIFR 538
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 147/303 (48%), Gaps = 13/303 (4%)
Query: 193 CKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
C+ + A +F C +SVSY+I+ +G C + R A + +M E+G P+
Sbjct: 241 CRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS 300
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
TY L+K + +A+ F EM R C+ +V TYT ++ G G+++++ V
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
+MV+ + PSV TYNALI CK V A + M + C PN+ T+N ++ GLC G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL---PN 427
+AV + RM +G+ P + +YNV+I C G + + M +C P+
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-----NCFDIEPD 475
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
T+ +I+A + K++ VA L M+ +G + T +++G+ G A
Sbjct: 476 CLTFTAIINAFCKQGKAD---VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 488 ILR 490
IL
Sbjct: 533 ILE 535
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 189/441 (42%), Gaps = 41/441 (9%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
AL+ F + + T + + I + A+ L +M P+ R + +L
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFR 213
+ G +A +F M GC+ +++++ ++D LC+ ++E A+ + K + R
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 214 CDSVSYNIIANGWCLIKR--------TPM---------------------------ALQV 238
++YN + NG+C R T M A+ +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
LK M + G+SP +V+YN L+ G R + A++ M E D +T+T +++ F
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
G+ + M+R G+ T LI +CK ++AL + E +V + ++
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
NV++ L ++ + +G++ K G+ PSV TY ++ +G+I + E M
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
CLPN+ Y ++I+ + + E+ A KLL M D G P T+ ++ G
Sbjct: 609 LS--GCLPNVYPYTIIINGLCQFGRVEE---AEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 479 TGNQEFAKEILRMQSRCGHAL 499
G + A E +R G+ L
Sbjct: 664 NGKLDRALETVRAMVERGYEL 684
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 175/412 (42%), Gaps = 39/412 (9%)
Query: 125 MRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+RD + ++S+ + P +++IL G+ A + M E GC+ +
Sbjct: 246 LRDALKVFDVMSK--EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMA 243
+ ++ LC ++ A +LF R +V +Y ++ +G C + A V ++M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
+ I P+++TYN L+ GY + ++ A+E M+KR C+ +V T+ ++ G G+
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
K+ + M+ GL P + +YN LI LC++ + A + M P+ T+ +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE-------- 415
C G + A ++G M + GI T +I C G+ L + E
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 416 ----------KMGDGSCSC---------------LPNLDTYNVLISAMFVRKKSEDLVVA 450
M C +P++ TY L+ + +S D+ +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI---RSGDITGS 600
Query: 451 GKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHALRHL 502
++L M G LP + + ++NGL G E A+++L G + H+
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 190/443 (42%), Gaps = 85/443 (19%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A+ L++ M P R F L E GKP++AV + M ++G D+ S+N ++D
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 191 VLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LC+ + A+ L + D +++ I N +C + +A L M +GIS
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 250 TMVTYNTLLKGYFRCHQLREAW------------------EFFLEMKKRKCEI------- 284
VT TL+ G + + R+A L+M + C++
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 285 ----------DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
VVTYTT+V G +G++ S R+ + M +G +P+V Y +I LC+
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
V+ A + M G PN TY V+++G ++G ++RA+E + M + G + + Y
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Query: 395 NVVIRYFC----------------------DAGEIEKGLSMFEKMG---DGSCSCL---- 425
+ +++ F D I + +S+ E++G G C L
Sbjct: 690 SSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRL 749
Query: 426 --------PNLDTYNVLISAMFVRKKSEDLVVAG-----------KLLIEMVDRGFLPRK 466
N NVL +F+ +K+ D+++ +L+ ++ GF+P
Sbjct: 750 CKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSF 808
Query: 467 FTFNRVLNGLALTGNQEFAKEIL 489
+F V+ GL G+ E A+E++
Sbjct: 809 KSFCLVIQGLKKEGDAERARELV 831
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 6/242 (2%)
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
Y++LL + A+ + M+ + ++ Y T+V+ G + ++ +++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-GCVPNLNTYNVVIRGLCHSGDM 372
+ G V +L+ C+ +++AL VF+ M + C PN +Y+++I GLC G +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
E A +M + G +PS +TY V+I+ CD G I+K ++F++M C PN+ TY
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK--PNVHTYT 340
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQ 492
VLI + K E+ A + +MV P T+N ++NG G A E+L +
Sbjct: 341 VLIDGLCRDGKIEE---ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 493 SR 494
+
Sbjct: 398 EK 399
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 42/357 (11%)
Query: 143 RGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAH 202
R P ++ IL AGK AV ++ +M G D + ++ LC ++V++A+
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 203 SLF--KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG 260
+ + R + +V YN + +G+C R A + M++ G P +VTYN LL
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Query: 261 YFRCHQLREAWEFFLEMK---------------KRKCEI--------------------D 285
Y+ + L+ A EM KR C + D
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD 324
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
VV+Y+T++ F A +K+ R+F+EM + G+V +V TY +LI+ ++ A + +
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
+M G P+ Y ++ LC SG++++A M +H I P +YN +I C +G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 406 EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
+ + + +FE M C P+ T+ +I + KK L A K+ +M+D+GF
Sbjct: 445 RVTEAIKLFEDMKGKECC--PDELTFKFIIGGLIRGKK---LSAAYKVWDQMMDKGF 496
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 174/395 (44%), Gaps = 12/395 (3%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
A+Q F + RH +Y + I + R + A + M+ + P ++
Sbjct: 28 AVQVFDEM-RHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFI 86
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF--RGRF 212
K + M G D+ +FN LD+LC+ +V A F RGR
Sbjct: 87 SGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR- 145
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
D VSY I+ NG + A+++ M G+SP L+ G ++ A+E
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 273 FFLE-MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
E +K + ++ V Y ++ GF AG ++K++ + M + G P + TYN L+
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR-MEKHGIRPS 390
+ ++ A V EMV G + +YN +++ C ++ +M + ME G
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CD 324
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVA 450
V +Y+ +I FC A K +FE+M + N+ TY LI A F+R+ + VA
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGM--VMNVVTYTSLIKA-FLREGNSS--VA 379
Query: 451 GKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
KLL +M + G P + + +L+ L +GN + A
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L S M + P + +L Y RA V M G + D S+N +L
Sbjct: 239 AEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK 298
Query: 191 VLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ + ++ + K R CD VSY+ + +C T A ++ +EM ++G+
Sbjct: 299 RHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVM 358
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+VTY +L+K + R A + +M + D + YTT++ +G V K+ VF
Sbjct: 359 NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVF 418
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
++M+ + P +YN+LI LC+ V A+ +FE+M GK C P+ T+ +I GL
Sbjct: 419 NDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRG 478
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+ A + +M G + +I+ C
Sbjct: 479 KKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
KA + F+ + R + + + I R + + A L+ +M L P + +
Sbjct: 343 KAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFR 213
+ +G +A VF M EH D S+N+++ LC++ RV A LF+ +G+
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 214 C-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG 260
C D +++ I G K+ A +V +M ++G + +TL+K
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 186/398 (46%), Gaps = 33/398 (8%)
Query: 114 GFEHAIDIAARMR------DYTTAWTLVSRMRS--------------LRRGPTPR--AFA 151
G + A + RMR D TT +L+S L G +P ++
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 152 ILAERYAAAGKPHRAVRVF-ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG 210
L Y G+ A ++ +H G ++++N +LD LCK+ + A LFK +
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
Query: 211 RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA 270
R + + ++YNI+ NG C +R +++E+ + G +P VTY T+LK YF+ ++ +
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 271 WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL-VPSVATYNALIQ 329
+ FL+MKK D +V G +++ E+VR+G + +YN L+
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
+ K + + EE+ KG P+ T+ +++ GL + G+ A +++ + + G++P
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
SV T N +I C AG +++ + +F M + + TY ++ + K LV
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASME------VRDEFTYTSVVHNLC---KDGRLVC 413
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
A KLL+ ++G VL+G+ T + + A++
Sbjct: 414 ASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARK 451
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 150/339 (44%), Gaps = 40/339 (11%)
Query: 185 FNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
N ++ LCK + +E A +L R D ++YN + G+ A V + M
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
E GI P + TYN+L+ G + L + F EM D+ +Y T++ + G
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 304 KSKRVFDEMVR-AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
++ ++ E + AGLVP + TYN L+ LCK NA+ +F+ + + P L TYN++
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNIL 194
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG---- 418
I GLC S + M ++K G P+ TY +++ + IEKGL +F KM
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 419 --DGSCSCL----------------------------PNLDTYNVLISAMFVRKKSEDLV 448
DG +C ++ +YN L++ F K +L
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF---KDGNLD 311
Query: 449 VAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKE 487
LL E+ +G P +T ++NGL GN A++
Sbjct: 312 AVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEK 350
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 13/281 (4%)
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
NI N C + A +L + G+ P ++TYNTL+KGY R + EA+ M++
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
E DV TY +++ G + + ++FDEM+ +GL P + +YN L+ K
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 340 ALLVFEEMVG-KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
A + E + G VP ++TYN+++ LC SG + A+E + K ++P + TYN++I
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILI 195
Query: 399 RYFCDA---GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLI 455
C + G ++ + +K G PN TY ++ F K+ E + +L +
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSG-----YTPNAVTYTTMLKMYFKTKRIEKGL---QLFL 247
Query: 456 EMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+M G+ F V++ L TG E A E + R G
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 12/189 (6%)
Query: 312 MVRAGLV--PSVAT--YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
MVR GL+ P ++T N + LCK ++ A + + + G +P++ TYN +I+G
Sbjct: 1 MVR-GLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYT 59
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
++ A RM + GI P V TYN +I + + L +F++M S P+
Sbjct: 60 RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLS--PD 117
Query: 428 LDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD-RGFLPRKFTFNRVLNGLALTGNQEFAK 486
+ +YN L+S F + + A K+L E + G +P T+N +L+ L +G+ + A
Sbjct: 118 MWSYNTLMSCYFKLGRHGE---AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAI 174
Query: 487 EILR-MQSR 494
E+ + ++SR
Sbjct: 175 ELFKHLKSR 183
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 7/289 (2%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A LV RM + G P + + G A+ + M E + + +N I+D
Sbjct: 29 ALALVDRM--VEEGHQP--YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 191 VLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS 248
LCK A +LF +G F D ++Y+ + + +C R A Q+L++M ER I+
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFP-DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQIN 143
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P +VT++ L+ + ++ EA E + +M +R +TY +M+ GF + +KR+
Sbjct: 144 PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM 203
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
D M P V T++ LI CK V N + +F EM +G V N TY +I G C
Sbjct: 204 LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
GD++ A + + M G+ P+ T+ ++ C E+ K ++ E +
Sbjct: 264 VGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 148/300 (49%), Gaps = 7/300 (2%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P F L G+ +A+ + M E G + + TI++ LCK E A +L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNL 63
Query: 205 F-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
K + V YN I + C A + EM ++GI P ++TY+ ++ + R
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+ +A + +M +R+ DVVT++ +++ G+V +++ ++ +M+R G+ P+ T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
YN++I CK+D + +A + + M K C P++ T++ +I G C + ++ +E M
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
+ GI + TY +I FC G+++ + M S PN T+ +++++ +K+
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM--ISSGVAPNYITFQSMLASLCSKKE 301
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 3/292 (1%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
+ LQ +DR H P G I+ +M D +A L+S+M + +
Sbjct: 25 RVLQALALVDRMVEEGHQPYGT--IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAI 82
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-F 212
+R G A +F MH+ G D+ +++ ++D C++ R A L + R
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
D V+++ + N + A ++ +M RGI PT +TYN+++ G+ + +L +A
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
M + C DVVT++T+++G+ A V +F EM R G+V + TY LI C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
+ + A + M+ G PN T+ ++ LC ++ +A + ++K
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 9/286 (3%)
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
R D V++ + NG C R AL ++ M E G P Y T++ G + A
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
+M++ + VV Y ++ G ++ +F EM G+ P V TY+ +I C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
+ +A + +M+ + P++ T++ +I L G + A E G M + GI P+
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TYN +I FC + M + M SCS P++ T++ LI+ K+ ++ +
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCS--PDVVTFSTLINGYCKAKRVDN---GME 237
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
+ EM RG + T+ +++G G+ + A+++L + G A
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 9/213 (4%)
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
M + C DVVT+TT+++G G V ++ + D MV G P Y +I LCK
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
++AL + +M ++ YN +I LC G A M GI P V TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
+I FC +G + M + + P++ T++ LI+A+ K + A ++ +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQIN--PDVVTFSALINALVKEGKVSE---AEEIYGD 171
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
M+ RG P T+N +++G AK +L
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 146/324 (45%), Gaps = 1/324 (0%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
A +FF + H+ + + + I A +Y W LV M T R F +L
Sbjct: 132 AYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI 191
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT-FRGRFR 213
AG +AV F+ R +S+N IL+ L K+ ++ ++K F
Sbjct: 192 CSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFS 251
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
D ++YNI+ + + ++ EMA G SP TYN LL + ++ A
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT 311
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
MK+ + V+ YTT++ G AG ++ K DEMV+AG P V Y +I
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
+ A +F EM KG +PN+ TYN +IRGLC +G+ A + ME G P+
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKM 417
Y+ ++ Y AG++ + + +M
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREM 455
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 6/284 (2%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
FR SY+++ + +++ EM + G T T+N L+ ++A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F++ K +Y +++ + K + V+ +M+ G P V TYN L+
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
+ + +F+EM G P+ TYN+++ L A+ + M++ GI PSV
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
Y +I AG +E ++M C P++ Y V+I+ V S +L A
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCR--PDVVCYTVMITGYVV---SGELDKAK 379
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR-MQSR 494
++ EM +G LP FT+N ++ GL + G A +L+ M+SR
Sbjct: 380 EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 135/259 (52%), Gaps = 1/259 (0%)
Query: 142 RRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT-KRVEM 200
+R T ++ L + G A R+F M + + +S+ ++L+ LC K +E
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 201 AHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG 260
L K D++ YN + + +K+ + ++M + G SP + TYN L+
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIAS 486
Query: 261 YFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS 320
+ R ++ EA F E+++ C+ D+++Y ++++ G G+V ++ F EM GL P
Sbjct: 487 FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD 546
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMG 380
V TY+ L++ K + V+ A +FEEM+ KGC PN+ TYN+++ L +G AV+
Sbjct: 547 VVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYS 606
Query: 381 RMEKHGIRPSVQTYNVVIR 399
+M++ G+ P TY V+ R
Sbjct: 607 KMKQQGLTPDSITYTVLER 625
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 6/322 (1%)
Query: 114 GFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM 173
G+ + + A+ + A + SRM P +++L A G+ R V + +
Sbjct: 307 GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV-VEI 365
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRT 232
+ Q + S+ ++ L K V AH LF + + + SY + C +T
Sbjct: 366 SKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
A+++L ++ E+G+ + YNT+ + Q+ + F +MKK D+ TY +
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 293 VHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
+ FG GEV ++ +F+E+ R+ P + +YN+LI L K V A + F+EM KG
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLS 412
P++ TY+ ++ + +E A M G +P++ TYN+++ G + +
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVD 603
Query: 413 MFEKMGDGSCSCLPNLDTYNVL 434
++ KM + P+ TY VL
Sbjct: 604 LYSKMKQQGLT--PDSITYTVL 623
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 161/363 (44%), Gaps = 12/363 (3%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
R RDY+ A+ + +R A+ +L + A K +A +VF M + CR+D
Sbjct: 215 RSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFEDMKKRHCRRDEY 271
Query: 184 SFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
++ ++ + + + + A LF + + V YN + K A+QV M
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
E G P TY+ LL QL + +E+ KR + +Y +V G V
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVR-LDGVVEISKRYMTQGIYSY--LVRTLSKLGHV 388
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
++ R+F +M + +Y ++++ LC A+ + ++ KG V + YN V
Sbjct: 389 SEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSC 422
L + + +M+K G P + TYN++I F GE+++ +++FE++ C
Sbjct: 449 FSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDC 508
Query: 423 SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
P++ +YN LI+ + K+ D+ A EM ++G P T++ ++ T
Sbjct: 509 K--PDIISYNSLINCL---GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 483 EFA 485
E A
Sbjct: 564 EMA 566
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 141/316 (44%), Gaps = 19/316 (6%)
Query: 165 RAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIAN 224
R + SM + ++++ N ++ T+ ++M L K + + +S +Y +
Sbjct: 154 RVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWD--LKMNSFTYKCLLQ 211
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
+ + A V E+ G + YN LL + + A + F +MKKR C
Sbjct: 212 AYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRR 268
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
D TYT M+ G G+ ++ +F+EM+ GL +V YN L+QVL K V A+ VF
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMER---AVEYMGRMEKHGIRPSVQTYNVVIRYF 401
MV GC PN TY++++ L G + R VE R GI Y+ ++R
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------YSYLVRTL 382
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
G + + +F M S D+Y ++ ++ K+ + A ++L ++ ++G
Sbjct: 383 SKLGHVSEAHRLFCDM--WSFPVKGERDSYMSMLESLCGAGKT---IEAIEMLSKIHEKG 437
Query: 462 FLPRKFTFNRVLNGLA 477
+ +N V + L
Sbjct: 438 VVTDTMMYNTVFSALG 453
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 199/463 (42%), Gaps = 37/463 (7%)
Query: 55 KLVLESDPGTLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSG 114
K+ L D TL E++ + + + + L+ L HG K ++ L + PS
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG-KFIEAETVLKQMTDKGIGPSI 361
Query: 115 FEHAI--DIAARMRDYTTAWTLVSRMRSLRRGPTPRA--FAILAERYAAAGKPHRAVRVF 170
+ + I D ++ + A T+V M+ R G P A + L Y + GK A +
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMK--RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLI 229
M + C + + N +L L K R+ A L + + + D+V+ NII +G C
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 230 KRTPMALQVLKEMAERGIS-----------------------PTMVTYNTLLKGYFRCHQ 266
A++++K M G + P ++TY+TLL G + +
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
EA F EM K + D V Y +H F G++ + RV +M + G S+ TYN+
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
LI L K+ + + +EM KG PN+ TYN I+ LC +E A + M +
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
I P+V ++ +I FC + + +FE C Y+++ + + +
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFET---AVSICGQKEGLYSLMFNELLAAGQ--- 713
Query: 447 LVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
L+ A +LL ++DRGF F + ++ L E A IL
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGIL 756
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 158/325 (48%), Gaps = 12/325 (3%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVS---YNIIANGWCLIKRTPMA 235
+ L+S +++ + K+ ++ A F+ R RF + S YN++ +R
Sbjct: 72 KTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFV 131
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
+ K+M GI+P T+N L++ + A E F EM ++ C+ + T+ +V G
Sbjct: 132 SWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG 191
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
+ AG K + + M G++P+ YN ++ C++ ++ + E+M +G VP+
Sbjct: 192 YCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD 251
Query: 356 LNTYNVVIRGLCHSG---DMERAVEYMGRMEKHGI-RPSVQTYNVVIRYFCDAGEIEKGL 411
+ T+N I LC G D R M E G+ RP+ TYN++++ FC G +E
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
++FE + + L +L +YN+ + + K + A +L +M D+G P +++N
Sbjct: 312 TLFESIREN--DDLASLQSYNIWLQGLVRHGK---FIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 472 VLNGLALTGNQEFAKEILRMQSRCG 496
+++GL G AK I+ + R G
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNG 391
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 172/351 (49%), Gaps = 10/351 (2%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P F +L + A +F M E GC+ + +F ++ CK + L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 205 FKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ V YN I + +C R + +++++M E G+ P +VT+N+ + +
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 264 CHQLREAWEFFLEMKKRKC----EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
++ +A F +M+ + + +TY M+ GF G ++ +K +F+ + +
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
S+ +YN +Q L + A V ++M KG P++ +YN+++ GLC G + A +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMF 439
G M+++G+ P TY ++ +C G+++ S+ ++M +CLPN T N+L+ +++
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN--NCLPNAYTCNILLHSLW 442
Query: 440 VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
K + A +LL +M ++G+ T N +++GL +G + A EI++
Sbjct: 443 ---KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 179/437 (40%), Gaps = 59/437 (13%)
Query: 102 LDRHPTYIHSPSGFEHAIDIAARMRDYTT--AWTLVSRMRSLRRGPTPRAFAILAERYAA 159
D P P+ F I + + T L++ M S P + + +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT-----FRGRFRC 214
G+ + ++ M E G D+ +FN+ + LCK +V A +F + G R
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 215 DSVSYNIIANGWC---------------------------------LIKRTPM--ALQVL 239
+S++YN++ G+C L++ A VL
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
K+M ++GI P++ +YN L+ G + L +A MK+ D VTY ++HG+
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
G+V +K + EM+R +P+ T N L+ L K + A + +M KG + T
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
N+++ GLC SG++++A+E + M HG N I D S+ E
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD--------SLIEN--- 518
Query: 420 GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALT 479
+CLP+L TY+ L++ + K+ A L EM+ P +N ++
Sbjct: 519 ---NCLPDLITYSTLLNGLC---KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 480 GNQEFAKEILRMQSRCG 496
G A +L+ + G
Sbjct: 573 GKISSAFRVLKDMEKKG 589
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 12/322 (3%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
+FN ++ LC + V+ A LF + + + ++ I+ G+C T L++L M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
G+ P V YNT++ + R + ++ + +M++ D+VT+ + + G+V
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 303 KKSKRVFDEMVRAGLV----PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
+ R+F +M + P+ TYN +++ CK +++A +FE + + +L +
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
YN+ ++GL G A + +M GI PS+ +YN+++ C G + ++ M
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 419 -DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA 477
+G C P+ TY L+ K + A LL EM+ LP +T N +L+ L
Sbjct: 389 RNGVC---PDAVTYGCLLHGYCSVGKVD---AAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 478 LTGNQEFAKEILRMQSRCGHAL 499
G A+E+LR + G+ L
Sbjct: 443 KMGRISEAEELLRKMNEKGYGL 464
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 2/256 (0%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ A L + M + P A+ I + GK A RV M + GC + L ++N+
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERG 246
++ L ++ H L + + ++ +YN C ++ A +L EM ++
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
I+P + ++ L++ + + A E F E C Y+ M + AG++ K+
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+ + ++ G Y L++ LCKKD ++ A + +M+ +G + VI GL
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Query: 367 CHSGDMERAVEYMGRM 382
G+ + A + +M
Sbjct: 779 GKMGNKKEANSFADKM 794
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 169/418 (40%), Gaps = 42/418 (10%)
Query: 77 TPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVS 136
T E V VL+ +L+FF +P+Y + +E A + Y + W ++
Sbjct: 76 TSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILK 135
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEH-GCRQDLNSFNTILDVLCKT 195
+M+ L + + E+Y G +AV +F + + GC+Q ++ +N++L LC
Sbjct: 136 QMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDV 195
Query: 196 KRVEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
K A++L + R + D +Y I+ NGWC + A + L EM+ RG +P
Sbjct: 196 KMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGR 255
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
+ L++G L A E +M K D+ T+ ++ +GEV+ ++ +
Sbjct: 256 DLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACK 315
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
GL + TY LI + K + A + V G P + Y +I+G+C +G +
Sbjct: 316 LGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDD 375
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
A + M+ P+ Y ++I G+
Sbjct: 376 AFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK---------------------------- 407
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQ 492
V A L+EM + G +P F+ V +GL G + A I +++
Sbjct: 408 ------------FVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLE 453
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 41/250 (16%)
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+PT + Y L K + W+ +MK +I T ++ +G G V ++
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 308 VFDEMVRA-GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+F+ + + G +V YN+L+ LC A + M+ KG P+ TY +++ G
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C +G M+ A E++ M + G P + +++I +AG +E M KM G
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG------ 281
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
GF+P TFN ++ ++ +G EF
Sbjct: 282 ----------------------------------GFVPDIQTFNILIEAISKSGEVEFCI 307
Query: 487 EILRMQSRCG 496
E+ + G
Sbjct: 308 EMYYTACKLG 317
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 192/420 (45%), Gaps = 22/420 (5%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRD--YTTAWTLVSRMRSLRRGPTPRAFA 151
K L+ F D P+ S S F + I A R+ Y T+ L+ RM++ + P+ +
Sbjct: 159 KCLEVF---DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYN 215
Query: 152 ILAERYAAAGKPHRAV-RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR- 209
+ A G + +F M G + D+ ++NT+L + A +F+T
Sbjct: 216 TVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND 275
Query: 210 GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLRE 269
G D +Y+ + + ++R +L EMA G P + +YN LL+ Y + ++E
Sbjct: 276 GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A F +M+ C + TY+ +++ FG +G +++F EM + P ATYN LI+
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
V + + + +F +MV + P++ TY +I G E A + + M + I P
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR----KKSE 445
S + Y VI F A E+ L F M + + P+++T++ L+ + F R K+SE
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN--PSIETFHSLLYS-FARGGLVKESE 512
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN-QEFAKEILRMQ-SRCGHALRHLK 503
+L +VD G + TFN + G +E K + M+ SRC R L+
Sbjct: 513 ------AILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 566
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 6/345 (1%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ H ++ ++R L+ M S P ++ +L E YA +G A+ VF M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTP 233
GC + N+++ +L++ ++ R + LF + D+ +YNI+ +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
+ + +M E I P M TY ++ + +A + M YT ++
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
FG A +++ F+ M G PS+ T+++L+ + V+ + + +V G
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
N +T+N I G E AV+ MEK P +T V+ + A +++
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
FE+M + LP++ Y ++++ V K+E +LL EM+
Sbjct: 585 FEEM--KASDILPSIMCYCMMLA---VYGKTERWDDVNELLEEML 624
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P Y ++ R L + E F EM + V +YT +++ +G G + S +
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL-VFEEMVGKGCVPNLNTYNVV----- 362
D M + PS+ TYN +I + LL +F EM +G P++ TYN +
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 363 IRGLCHSGDM------------------------------ERAVEYMGRMEKHGIRPSVQ 392
IRGL +M E+ + +G M G P +
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
+YNV++ + +G I++ + +F +M + C PN +TY+VL++ + +D+ +
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQM--QAAGCTPNANTYSVLLNLFGQSGRYDDVR---Q 373
Query: 453 LLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
L +EM P T+N ++ + G + KE++ +
Sbjct: 374 LFLEMKSSNTDPDAATYNILIE---VFGEGGYFKEVVTL 409
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV-PSVATYNALIQVLCKKDCVQN 339
K ++ + + + F G+ ++S R+F M R P+ Y +I +L ++ +
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDK 159
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
L VF+EM +G ++ +Y +I +G E ++E + RM+ I PS+ TYN VI
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN 219
Query: 400 YFCDAG-EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
G + E L +F +M P++ TYN L+SA +R ++ A + M
Sbjct: 220 ACARGGLDWEGLLGLFAEMRHEGIQ--PDIVTYNTLLSACAIRGLGDE---AEMVFRTMN 274
Query: 459 DRGFLPRKFTFNRVL 473
D G +P T++ ++
Sbjct: 275 DGGIVPDLTTYSHLV 289
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 150/277 (54%), Gaps = 3/277 (1%)
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMA-HSLFKTFRGRFRCDSVSYNIIANGWCL 228
+ M + G D+ + +++++ C + ++ A + + + + D V I+ + C
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+ AL+VLK M +RGISP +VTY++L+ G + +L +A EM +K +V+T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
++ ++ + G++ K V+ M++ + P+V TY++LI LC + V A+ + + M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
KGC PN+ TY+ + G S ++ ++ + M + G+ + + N +I+ + AG+I+
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 409 KGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
L +F M S +PN+ +YN++++ +F + E
Sbjct: 241 LALGVFGYM--TSNGLIPNIRSYNIVLAGLFANGEVE 275
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 137/274 (50%), Gaps = 3/274 (1%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIAN 224
A+ V M + G ++ ++++++ LCK+ R+ A L + + + ++++ + +
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
+ + V K M + I P + TY++L+ G +++ EA + M + C
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
+VVTY+T+ +GF + V ++ D+M + G+ + + N LI+ + + AL VF
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
M G +PN+ +YN+V+ GL +G++E+A+ M+K + TY ++I C A
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+++ +F K+ P+ Y ++I+ +
Sbjct: 307 CMVKEAYDLFYKLKFKRVE--PDFKAYTIMIAEL 338
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID + R A ++ RM+ P ++ L +G+ A R M
Sbjct: 55 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 114
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKT-FRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
++ +F+ ++D K ++ S++K + + +Y+ + G C+ R A++
Sbjct: 115 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 174
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+L M +G +P +VTY+TL G+F+ ++ + + +M +R + V+ T++ G+
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
AG++ + VF M GL+P++ +YN ++ L V+ AL FE M ++
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
TY ++I G+C + ++ A + +++ + P + Y ++I AG
Sbjct: 295 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 5/245 (2%)
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
+M + GI P +VT ++L+ G+ + +++A +M+K + DVV T ++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
V + V M G+ P+V TY++LI LCK + +A EM K PN+ T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
+I G + + M + I P+V TY+ +I C +++ + M + M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI-- 180
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
S C PN+ TY+ L + F + +D + KLL +M RG + N ++ G G
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGI---KLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 481 NQEFA 485
+ A
Sbjct: 238 KIDLA 242
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
M S + P F+ L + YA GK + V+ M + ++ ++++++ LC R
Sbjct: 109 MDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 168
Query: 198 VEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
V+ A + + C + V+Y+ +ANG+ R +++L +M +RG++ V+ N
Sbjct: 169 VDEAIKMLDLMISK-GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
TL+KGYF+ ++ A F M ++ +Y ++ G GEV+K+ F+ M +
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT 287
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
+ TY +I +CK V+ A +F ++ K P+ Y ++I L +G M
Sbjct: 288 RNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG-MRTE 346
Query: 376 VEYMGRMEKHGIR 388
+ + R + +R
Sbjct: 347 ADALNRFYQKHVR 359
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F ID A+ + ++ M + P ++ L + A+++ M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
GC ++ +++T+ + K+ RV+ L R ++VS N + G+ +
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
+AL V M G+ P + +YN +L G F ++ +A F M+K + ++D++TYT M+
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
HG A VK++ +F ++ + P Y +I L
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 27/367 (7%)
Query: 135 VSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVL-- 192
+SR+ + + T ++A L + P+ ++ I M + S N++ D L
Sbjct: 50 ISRIPNFKHNVT--SYASLVTLLCSQEIPYEVPKITILM--------IKSCNSVRDALFV 99
Query: 193 ---CKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+T R +F +++ YN + + ++ EM E +SP
Sbjct: 100 VDFCRTMRKG------DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSP 153
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+ T+NTL+ GY + + EA ++ + + C+ D TYT+ + G EV + +VF
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
EM + G + +Y LI L + + AL + +M C PN+ TY V+I LC S
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G A+ +M + GI+P Y V+I+ FC +++ + E M + +PN+
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN--GLMPNVI 331
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TYN LI F +K A LL +M+++ +P T+N ++ G +GN + A +L
Sbjct: 332 TYNALIKG-FCKKNVHK---AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Query: 490 RMQSRCG 496
+ G
Sbjct: 388 SLMEESG 394
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 164/387 (42%), Gaps = 74/387 (19%)
Query: 73 PFRWTPELVDEVLKRLWNHGPK-ALQFFKHLDRHPTYIHSPSGFEHAIDI---------- 121
PF +TP V + N P+ AL F + R P + H+ + + + +
Sbjct: 23 PF-YTPSHVSSLFS--LNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEV 79
Query: 122 ----------AARMRDYTTAWTLVSRMRSLRRGP--------TPRAFAILAERYAAAGKP 163
+RD A +V R++R+G TP+ + L A G
Sbjct: 80 PKITILMIKSCNSVRD---ALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLV 136
Query: 164 HRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDS--VSYNI 221
R++ M E D+ +FNT+++ CK V A + T+ + CD +Y
Sbjct: 137 EEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQ-YVTWLIQAGCDPDYFTYTS 195
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
G C K A +V KEM + G V+Y L+ G F ++ EA ++MK
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG------------------------- 316
C +V TYT ++ +G+ ++ +F +M +G
Sbjct: 256 CCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEAS 315
Query: 317 ----------LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
L+P+V TYNALI+ CKK+ V A+ + +M+ + VP+L TYN +I G
Sbjct: 316 GLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQT 393
C SG+++ A + ME+ G+ P+ +T
Sbjct: 375 CSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 132/262 (50%), Gaps = 9/262 (3%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A V + M E GI PT++T+NT+L F+ L + +LEMK+R E VTY +++
Sbjct: 222 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 281
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
GF G++++++R +M R+G + ++N LI+ CK+ +A V +EM+ G P
Sbjct: 282 GFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 341
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+TYN+ I LC G ++ A E + M P V +YN ++ + G+ + +F
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
+ + G P++ TYN LI + +S +L A +L EM + P T+ ++
Sbjct: 398 DDLRAGDIH--PSIVTYNTLIDGLC---ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 475 GLALTGNQEFAKEILRMQSRCG 496
G GN A E+ R G
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKG 474
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 37/313 (11%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
P ++ L Y GK A +F + + ++NT++D LC++ +E A
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 204 LFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGI--------------- 247
L + + D ++Y + G+ MA +V EM +GI
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 248 ---------------------SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
+P + YN + G + L +A EF ++ + D
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
VTYTT++ G+ G+ K ++ ++DEM+R L PSV TY LI K ++ A E
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M +G PN+ T+N ++ G+C +G+++ A Y+ +ME+ GI P+ +Y ++I CD +
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 407 IEKGLSMFEKMGD 419
E+ + ++++M D
Sbjct: 671 WEEVVKLYKEMLD 683
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 173/389 (44%), Gaps = 38/389 (9%)
Query: 134 LVSRMRSLRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
L+S + +R+G P+ R I+ + + ++A V+ +M EHG + +FNT+LD
Sbjct: 188 LLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDS 247
Query: 192 LCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
K +E ++ + R V+YNI+ NG+ + A + +M G + T
Sbjct: 248 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRK---------------CEI----------- 284
++N L++GY + +AW EM C+
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS 367
Query: 285 -----DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
DVV+Y T++HG+ G+ ++ +FD++ + PS+ TYN LI LC+ ++
Sbjct: 368 SMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEG 427
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
A + EEM + P++ TY +++G +G++ A E M + GI+P Y
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV 487
Query: 400 YFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD 459
G+ +K + E+M + P+L YNV I + K +LV A + ++
Sbjct: 488 GELRLGDSDKAFRLHEEMV-ATDHHAPDLTIYNVRIDGLC---KVGNLVKAIEFQRKIFR 543
Query: 460 RGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
G +P T+ V+ G G + A+ +
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
F++M+R G +PSV N +++VL + A V+E M+ G +P + T+N ++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
+GD+ER + M++ I S TYN++I F G++E+ M + P
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY- 309
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
++N LI + +D A + EM++ G P T+N + L G + A+E+
Sbjct: 310 -SFNPLIEGYCKQGLFDD---AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAREL 365
Query: 489 L 489
L
Sbjct: 366 L 366
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
V KK + LL FE+M+ KG +P++ N+V++ L S M +A M +HGI P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
+V T+N ++ AG++E+ ++ +M + + TYN+LI+ K E+
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEF--SEVTYNILINGFSKNGKMEE--- 291
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
A + +M GF ++FN ++ G G
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG 322
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 182/400 (45%), Gaps = 10/400 (2%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
L F + + H+ + + +D R + + ++ +M+ F L
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 155 ERYAAAGKPHRAVRVFISMHEHG-CRQDLNSFNTILDVLCKTKRVEMAHSL--FKTFRGR 211
++ + + + +F + + LN+ +T L++L + V ++ L +
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS-PTMVTYNTLLKGYFRCHQLREA 270
+ ++ +NI+ C A V++EM GIS P +TY+TL+ F + +EA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 271 WEFFLEM-KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
E F +M K D VT+ M++GF AGEV+++K++ D M + G P+V Y+AL+
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
CK +Q A F+E+ G + Y ++ C +G+ + A++ +G M+ R
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
TYNV++R G E+ L M ++ G N +Y ++++A+ + E V
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL--NKGSYRIILNALCCNGELEKAV- 428
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
K L M +RG P T+N ++ L +G E +L
Sbjct: 429 --KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P P F ++ + AG+ RA ++ M ++GC ++ +++ +++ CK +++ A
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 205 FKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
F + + D+V Y + N +C T A+++L EM +TYN +L+G
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+ EA + + ++ +Y +++ GE++K+ + M G+ P AT
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+N L+ LC+ + + V + G +P ++ V+ +C
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 1/242 (0%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
+A++ F+ + P F I+ R + A ++ M+ P ++ L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RF 212
+ GK A + F + + G + D + T+++ C+ + A L + R
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
R D+++YN+I G R+ ALQ+L + G+ +Y +L +L +A +
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
F M +R T+ +V +G + RV +R GL+P ++ A+++ +C
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 333 KK 334
K+
Sbjct: 490 KE 491
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 299 AGEVKKSKRVF-DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV-------------- 343
+GEV S+++ GL P+ +N L++ CK + A LV
Sbjct: 173 SGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNS 232
Query: 344 ----------------------FEEMVGK-GCVPNLNTYNVVIRGLCHSGDMERAVEYMG 380
FE+M+ K G P+ T+NV+I G C +G++ERA + +
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD 292
Query: 381 RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT--YNVLISAM 438
M+K+G P+V Y+ ++ FC G+I++ F+++ LDT Y L++
Sbjct: 293 FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK----LDTVGYTTLMNC- 347
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
F R D A KLL EM T+N +L GL+ G E E L+M + G
Sbjct: 348 FCRNGETD--EAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE---EALQMLDQWGSE 402
Query: 499 LRHL 502
HL
Sbjct: 403 GVHL 406
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 42/260 (16%)
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
K ++G + TY+ LL R + +MK C + ++ F
Sbjct: 78 KASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFS-- 135
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
R+ L V LIQV+ + P+LN
Sbjct: 136 --------------RSDLHDKVMEMFNLIQVIARVK------------------PSLNAI 163
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKH--GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+ + L SG++ + + + KH G++P+ +N+++++ C G+I + E+M
Sbjct: 164 STCLNLLIDSGEVNLSRKLL-LYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEM 222
Query: 418 GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR-GFLPRKFTFNRVLNGL 476
S PN TY+ L+ +F +S++ V +L +M+ + G P TFN ++NG
Sbjct: 223 KRSGIS-YPNSITYSTLMDCLFAHSRSKEAV---ELFEDMISKEGISPDPVTFNVMINGF 278
Query: 477 ALTGNQEFAKEILRMQSRCG 496
G E AK+IL + G
Sbjct: 279 CRAGEVERAKKILDFMKKNG 298
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 16/353 (4%)
Query: 134 LVSRMRSLRR--GPTPRA--FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTIL 189
+ SR+ SL GP P F L + G+ RA +F M + G DL +++T++
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 190 DVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS 248
D K + M H LF + + D V ++ + + A V K M +GIS
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P +VTY L+KG + ++ EA+ + ++ KR E +VTY++++ GF G ++ +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
+++M++ G P V Y L+ L K+ + +A+ +M+G+ N+ +N +I G C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY------FCDAGEIEKGLSMFEKMGDGSC 422
+ A++ M +GI+P V T+ V+R FC + GL +F+ M
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 423 SCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
S ++ NV+I +F + ED A K +++ P T+N ++ G
Sbjct: 569 S--ADIAVCNVVIHLLFKCHRIED---ASKFFNNLIEGKMEPDIVTYNTMICG 616
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 159/329 (48%), Gaps = 11/329 (3%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + + + + L M + P + +L + + G A+R + M
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF--RCDSVSY------NIIANGW 226
R ++ FN+++D C+ R + A +F+ G + + D ++ +I+ + +
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEDAF 547
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
C + + LQ+ M IS + N ++ F+CH++ +A +FF + + K E D+
Sbjct: 548 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
VTY TM+ G+ + +++R+F+ + P+ T LI VLCK + + A+ +F
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 667
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M KG PN TY ++ S D+E + + M++ GI PS+ +Y+++I C G
Sbjct: 668 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 727
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
+++ ++F + D LP++ Y +LI
Sbjct: 728 VDEATNIFHQAIDA--KLLPDVVAYAILI 754
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 147/285 (51%), Gaps = 6/285 (2%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
FR VS N + G + + +A ++L + + G +P +VT+ TL+ G+ + ++ A+
Sbjct: 248 FRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
+ F M++R E D++ Y+T++ G+ AG + ++F + + G+ V +++ I V
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
K + A +V++ M+ +G PN+ TY ++I+GLC G + A G++ K G+ PS+
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
TY+ +I FC G + G +++E M P++ Y VL+ + K ++ A
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP--PDVVIYGVLVDGL---SKQGLMLHAM 481
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+ ++M+ + FN +++G + A ++ R+ G
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 129/283 (45%), Gaps = 7/283 (2%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAF------AILAERYAAAGKPHRAVR 168
F ID R+ + A + M P F +I+ + + KP ++
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWC 227
+F M + D+ N ++ +L K R+E A F G+ D V+YN + G+C
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
++R A ++ + + P VT L+ + + + A F M ++ + + V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
TY ++ F + +++ S ++F+EM G+ PS+ +Y+ +I LCK+ V A +F +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
+ +P++ Y ++IRG C G + A M ++G++P
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 8/334 (2%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P F + GK AV++F M E G ++ +FNT++D L R + A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 205 FKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ R ++Y+I+ G KR A VLKEM ++G P ++ YN L+ +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
L +A E M + + TY T++ G+ G+ ++R+ EM+ G + +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+ ++I +LC +AL EM+ + P +I GLC G +A+E +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF-EKMGDGSCSCLPNLDTYNVLISAMFVRK 442
G +T N ++ C+AG++++ + E +G G C+ + +YN LIS +K
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG---CVMDRVSYNTLISGCCGKK 554
Query: 443 KSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
K ++ A L EMV RG P +T++ ++ GL
Sbjct: 555 KLDE---AFMFLDEMVKRGLKPDNYTYSILICGL 585
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 146/306 (47%), Gaps = 6/306 (1%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
T++ LCK + A L+ F + F D+ + N + +G C + A ++ KE+
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
RG V+YNTL+ G +L EA+ F EM KR + D TY+ ++ G +V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++ + +D+ R G++P V TY+ +I CK + + F+EM+ K PN YN +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
R C SG + A+E M+ GI P+ TY +I+ +E+ +FE+M
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
PN+ Y LI K +V LL EM + P K T+ ++ G A GN
Sbjct: 713 --PNVFHYTALIDGY---GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 484 FAKEIL 489
A +L
Sbjct: 768 EASRLL 773
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 179/380 (47%), Gaps = 21/380 (5%)
Query: 123 ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDL 182
R + A+ ++ M P + L + + AG ++A+ + M G
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGW----CLIKRTPM---A 235
+++NT++ CK + + A L K S+ +N+ + CL+ M A
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEML------SIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
L+ + EM R +SP TL+ G + + +A E + + + +D T ++HG
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
AG++ ++ R+ E++ G V +YN LI C K + A + +EMV +G P+
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
TY+++I GL + +E A+++ +++G+ P V TY+V+I C A E+G F+
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+M S + PN YN LI A +S L +A +L +M +G P T+ ++ G
Sbjct: 635 EM--MSKNVQPNTVVYNHLIRAYC---RSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 476 LALTGNQEFAK---EILRMQ 492
+++ E AK E +RM+
Sbjct: 690 MSIISRVEEAKLLFEEMRME 709
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 142/345 (41%), Gaps = 40/345 (11%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ +A V M P L GK +A+ ++ G D + N
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
+L LC+ +++ A + K GR C D VSYN + +G C K+ A L EM +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
G+ P TY+ L+ G F +++ EA +F+ + K+ DV TY+ M+ G A ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKK------------------------------- 334
+ FDEM+ + P+ YN LI+ C+
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 335 ----DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
V+ A L+FEEM +G PN+ Y +I G G M + + M + P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
TY V+I + G + + + +M + +P+ TY I
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREK--GIVPDSITYKEFI 792
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 171/410 (41%), Gaps = 41/410 (10%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F AI+ + A L S+M P F + + G+ A M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E G L +++ ++ L + KR+ A+ + K + F + + YN + + +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ-------LRE----------------- 269
A+++ M +G+S T TYNTL+KGY + Q L+E
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 270 -----------AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
A F EM R TT++ G G+ K+ ++ + + G V
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
T NAL+ LC+ + A + +E++G+GCV + +YN +I G C ++ A +
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ M K G++P TY+++I + ++E+ + ++ LP++ TY+V+I
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN--GMLPDVYTYSVMIDGC 620
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+++E+ + EM+ + P +N ++ +G A E+
Sbjct: 621 CKAERTEE---GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 9/330 (2%)
Query: 164 HRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIA 223
+ A+ VF + G + N +L L + + F D +
Sbjct: 208 YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAI 267
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
N +C + A+++ +M E G++P +VT+NT++ G C + EA+ F +M +R E
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
++TY+ +V G A + + V EM + G P+V YN LI + + A+ +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCD 403
+ MV KG +TYN +I+G C +G + A + M G + ++ VI C
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 404 AGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
+ L +M + S P LIS + K A +L + +++GF+
Sbjct: 448 HLMFDSALRFVGEMLLRNMS--PGGGLLTTLISGLCKHGKHSK---ALELWFQFLNKGFV 502
Query: 464 PRKFTFNRVLNGLALTGNQEFA----KEIL 489
T N +L+GL G + A KEIL
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 36/284 (12%)
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF----------- 208
AGK A R+ + GC D S+NT++ C K+++ A
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 209 -------------------------RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
R D +Y+++ +G C +RT + EM
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
+ + P V YN L++ Y R +L A E +MK + + TYT+++ G + V+
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++K +F+EM GL P+V Y ALI K + + EM K PN TY V+I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
G G++ A + M + GI P TY I + G +
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 141 LRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
++RG P ++IL K A++ + +G D+ +++ ++D CK +R
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 199 EMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
E F + + ++V YN + +C R MAL++ ++M +GISP TY +L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
+KG ++ EA F EM+ E +V YT ++ G+G G++ K + + EM +
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
P+ TY +I + V A + EM KG VP+ TY I G G + A
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 309 FDEMVRAGLVPSVATYNALIQVLC---KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
FDE +R + + LI+V C K+D AL VF + KG P+ T N+++
Sbjct: 182 FDEEIRRKMS------DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS 235
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
L + + ++ E + K G+ P V + I FC G++E+ + +F KM + +
Sbjct: 236 LVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA-- 292
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA 477
PN+ T+N +I + + + ++ + + +MV+RG P T++ ++ GL
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKE---KMVERGMEPTLITYSILVKGLT 341
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTP 147
N +A+QF+ R+ P + ++ ID + M S P
Sbjct: 589 NKVEEAIQFWDDCKRNGML---PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 148 RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT 207
+ L Y +G+ A+ + M G + ++ +++ + RVE A LF+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 208 FRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
R + Y + +G+ + + +L+EM + + P +TY ++ GY R
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+ EA EM+++ D +TY ++G+ G V ++ + DE A ++ +N
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG---WNK 822
Query: 327 LIQ 329
LIQ
Sbjct: 823 LIQ 825
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 8/334 (2%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P F + GK AV++F M E G ++ +FNT++D L R + A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 205 FKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ R ++Y+I+ G KR A VLKEM ++G P ++ YN L+ +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
L +A E M + + TY T++ G+ G+ ++R+ EM+ G + +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+ ++I +LC +AL EM+ + P +I GLC G +A+E +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF-EKMGDGSCSCLPNLDTYNVLISAMFVRK 442
G +T N ++ C+AG++++ + E +G G C+ + +YN LIS +K
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG---CVMDRVSYNTLISGCCGKK 554
Query: 443 KSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
K ++ A L EMV RG P +T++ ++ GL
Sbjct: 555 KLDE---AFMFLDEMVKRGLKPDNYTYSILICGL 585
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 146/306 (47%), Gaps = 6/306 (1%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
T++ LCK + A L+ F + F D+ + N + +G C + A ++ KE+
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
RG V+YNTL+ G +L EA+ F EM KR + D TY+ ++ G +V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++ + +D+ R G++P V TY+ +I CK + + F+EM+ K PN YN +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
R C SG + A+E M+ GI P+ TY +I+ +E+ +FE+M
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
PN+ Y LI K +V LL EM + P K T+ ++ G A GN
Sbjct: 713 --PNVFHYTALIDGY---GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 484 FAKEIL 489
A +L
Sbjct: 768 EASRLL 773
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 179/380 (47%), Gaps = 21/380 (5%)
Query: 123 ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDL 182
R + A+ ++ M P + L + + AG ++A+ + M G
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGW----CLIKRTPM---A 235
+++NT++ CK + + A L K S+ +N+ + CL+ M A
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEML------SIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
L+ + EM R +SP TL+ G + + +A E + + + +D T ++HG
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
AG++ ++ R+ E++ G V +YN LI C K + A + +EMV +G P+
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
TY+++I GL + +E A+++ +++G+ P V TY+V+I C A E+G F+
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+M S + PN YN LI A +S L +A +L +M +G P T+ ++ G
Sbjct: 635 EM--MSKNVQPNTVVYNHLIRAYC---RSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 476 LALTGNQEFAK---EILRMQ 492
+++ E AK E +RM+
Sbjct: 690 MSIISRVEEAKLLFEEMRME 709
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 142/345 (41%), Gaps = 40/345 (11%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ +A V M P L GK +A+ ++ G D + N
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
+L LC+ +++ A + K GR C D VSYN + +G C K+ A L EM +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
G+ P TY+ L+ G F +++ EA +F+ + K+ DV TY+ M+ G A ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKK------------------------------- 334
+ FDEM+ + P+ YN LI+ C+
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 335 ----DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
V+ A L+FEEM +G PN+ Y +I G G M + + M + P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
TY V+I + G + + + +M + +P+ TY I
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREK--GIVPDSITYKEFI 792
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 171/410 (41%), Gaps = 41/410 (10%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F AI+ + A L S+M P F + + G+ A M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
E G L +++ ++ L + KR+ A+ + K + F + + YN + + +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ-------LRE----------------- 269
A+++ M +G+S T TYNTL+KGY + Q L+E
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 270 -----------AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
A F EM R TT++ G G+ K+ ++ + + G V
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
T NAL+ LC+ + A + +E++G+GCV + +YN +I G C ++ A +
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ M K G++P TY+++I + ++E+ + ++ LP++ TY+V+I
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN--GMLPDVYTYSVMIDGC 620
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+++E+ + EM+ + P +N ++ +G A E+
Sbjct: 621 CKAERTEE---GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 9/330 (2%)
Query: 164 HRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIA 223
+ A+ VF + G + N +L L + + F D +
Sbjct: 208 YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAI 267
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
N +C + A+++ +M E G++P +VT+NT++ G C + EA+ F +M +R E
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
++TY+ +V G A + + V EM + G P+V YN LI + + A+ +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCD 403
+ MV KG +TYN +I+G C +G + A + M G + ++ VI C
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 404 AGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
+ L +M + S P LIS + K A +L + +++GF+
Sbjct: 448 HLMFDSALRFVGEMLLRNMS--PGGGLLTTLISGLCKHGKHSK---ALELWFQFLNKGFV 502
Query: 464 PRKFTFNRVLNGLALTGNQEFA----KEIL 489
T N +L+GL G + A KEIL
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 36/284 (12%)
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF----------- 208
AGK A R+ + GC D S+NT++ C K+++ A
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 209 -------------------------RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
R D +Y+++ +G C +RT + EM
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
+ + P V YN L++ Y R +L A E +MK + + TYT+++ G + V+
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++K +F+EM GL P+V Y ALI K + + EM K PN TY V+I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
G G++ A + M + GI P TY I + G +
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 141 LRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
++RG P ++IL K A++ + +G D+ +++ ++D CK +R
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 199 EMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
E F + + ++V YN + +C R MAL++ ++M +GISP TY +L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
+KG ++ EA F EM+ E +V YT ++ G+G G++ K + + EM +
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
P+ TY +I + V A + EM KG VP+ TY I G G + A
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 309 FDEMVRAGLVPSVATYNALIQVLC---KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
FDE +R + + LI+V C K+D AL VF + KG P+ T N+++
Sbjct: 182 FDEEIRRKMS------DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTS 235
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
L + + ++ E + K G+ P V + I FC G++E+ + +F KM + +
Sbjct: 236 LVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA-- 292
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA 477
PN+ T+N +I + + + ++ + + +MV+RG P T++ ++ GL
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKE---KMVERGMEPTLITYSILVKGLT 341
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTP 147
N +A+QF+ R+ P + ++ ID + M S P
Sbjct: 589 NKVEEAIQFWDDCKRNGML---PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 148 RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT 207
+ L Y +G+ A+ + M G + ++ +++ + RVE A LF+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 208 FRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
R + Y + +G+ + + +L+EM + + P +TY ++ GY R
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+ EA EM+++ D +TY ++G+ G V ++ + DE A ++ +N
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG---WNK 822
Query: 327 LIQ 329
LIQ
Sbjct: 823 LIQ 825
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 10/343 (2%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
EAL N FR ++VLK++ N+ AL FF L R P + H + + R +
Sbjct: 315 EALHNFGFRMDAYQANQVLKQMDNYA-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 373
Query: 127 DYTTAWTLVSRMRSLRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+ L+ M +R G P + L Y A A+ VF M E GC D +
Sbjct: 374 QFGEINKLLDEM--VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIK--RTPMALQVLKE 241
+ T++D+ K +++A +++ + D+ +Y++I N CL K P A ++ E
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN--CLGKAGHLPAAHRLFCE 489
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M +G +P +VT+N ++ + + A + + +M+ + D VTY+ ++ G G
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+++++ VF EM R VP Y L+ + K V A ++ M+ G PN+ T N
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
++ M A + M G+ PS+QTY +++ DA
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 141/303 (46%), Gaps = 6/303 (1%)
Query: 172 SMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKR 231
++H G R D N +L + K G F+ D +Y + K+
Sbjct: 316 ALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPG-FKHDGHTYTTMVGNLGRAKQ 374
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
++L EM G P VTYN L+ Y R + L+EA F +M++ CE D VTY T
Sbjct: 375 FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCT 434
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++ AG + + ++ M AGL P TY+ +I L K + A +F EMVG+G
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
C PNL T+N++I + + E A++ M+ G +P TY++V+ G +E+
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE 554
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
+F +M + +P+ Y +L+ + K+ ++ A + M+ G P T N
Sbjct: 555 GVFAEMQRK--NWVPDEPVYGLLVD---LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 472 VLN 474
+L+
Sbjct: 610 LLS 612
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 41/229 (17%)
Query: 269 EAWEFFLEMKKRKC-EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
A FF +K++ + D TYTTMV G A + + ++ DEMVR
Sbjct: 341 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVR------------- 387
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
GC PN TYN +I + ++ A+ +M++ G
Sbjct: 388 ----------------------DGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGC 425
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDL 447
P TY +I AG ++ + M+++M + S P+ TY+V+I+ + K+ L
Sbjct: 426 EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLS--PDTFTYSVIINCL---GKAGHL 480
Query: 448 VVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
A +L EMV +G P TFN ++ A N E A ++ R G
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 184/426 (43%), Gaps = 41/426 (9%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA 149
N G +L+F +L Y S F + ++ A +V M P +
Sbjct: 35 NCGILSLKFLAYLVSRG-YTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVIS 93
Query: 150 FAILAERYAAAGKPHRAVRVFISMH-EHG--CRQDLNSFNTILDVLCKTKRVEMAHSLFK 206
+ L + + G A V S+ HG C+ D+ SFN++ + K K M +F
Sbjct: 94 YNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMK---MLDEVFV 150
Query: 207 TFRGRFRCDS---VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+C S V+Y+ + +C +AL+ M +SP +VT+ L+ GY +
Sbjct: 151 YMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
L A + EM++ + ++VVTYT ++ GF GE+++++ ++ MV + P+
Sbjct: 211 AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV 270
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
Y +I ++ NA+ +M+ +G ++ Y V+I GLC +G ++ A E + ME
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK---------------MGDGS------- 421
K + P + + ++ + +G ++ ++M+ K M DG
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLH 390
Query: 422 ------CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
C N Y VLI A+ K D + +L ++ + G +P KF + + G
Sbjct: 391 EAIVYFCIEKANDVMYTVLIDALC---KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 476 LALTGN 481
L GN
Sbjct: 448 LCKQGN 453
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 167/372 (44%), Gaps = 16/372 (4%)
Query: 95 ALQFFKHLDRHPTYIHSPS--GFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAI 152
AL+ F + R SP+ F ID + D A +L MR +R +
Sbjct: 182 ALKSFHSMKRDAL---SPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS-LFKTFRGR 211
L + + G+ RA ++ M E + + TI+D + + A L K
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
R D +Y +I +G C + A +++++M + + P MV + T++ YF+ +++ A
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
+ ++ +R E DVV +TM+ G G++ ++ V+ + +A V Y LI L
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEKANDV----MYTVLIDAL 413
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
CK+ +F ++ G VP+ Y I GLC G++ A + RM + G+ +
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
Y +I G + + +F++M + S P+ +++LI A +K ++ A
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGIS--PDSAVFDLLIRAY---EKEGNMAAAS 528
Query: 452 KLLIEMVDRGFL 463
LL++M RG +
Sbjct: 529 DLLLDMQRRGLV 540
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 161/383 (42%), Gaps = 39/383 (10%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P ++ + + +G+ A++ F SM ++ +F ++D CK +E+A SL
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 205 FKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+K R R + V+Y + +G+C A ++ M E + P + Y T++ G+F+
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
A +F +M + +D+ Y ++ G G++K++ + ++M ++ LVP +
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKG----------------------------CVPN 355
+ ++ K ++ A+ ++ +++ +G C+
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 356 LNT--YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
N Y V+I LC GD ++ + G+ P Y I C G + +
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV-AGKLLIEMVDRGFLPRKFTFNRV 472
+M L +L Y LI + S+ L+V A ++ EM++ G P F+ +
Sbjct: 461 KTRMVQEGL--LLDLLAYTTLIYGL----ASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 473 LNGLALTGNQEFAKE-ILRMQSR 494
+ GN A + +L MQ R
Sbjct: 515 IRAYEKEGNMAAASDLLLDMQRR 537
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 160/346 (46%), Gaps = 5/346 (1%)
Query: 73 PFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAW 132
P+ P L D LK + + +AL F H + + H + I A+ R++
Sbjct: 46 PWEEVPFLTD--LKEIEDP-EEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVD 101
Query: 133 TLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVL 192
++ +R F L + Y AG +A+ VF + C + + S NT+++VL
Sbjct: 102 QILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVL 161
Query: 193 CKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTM 251
+E A S F + R R +SVS+NI+ G+ A +V EM E + P++
Sbjct: 162 VDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
VTYN+L+ R + +A +M K++ + VT+ ++ G GE ++K++ +
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
M G P + Y L+ L K+ + A L+ EM + P++ YN+++ LC
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+ A + M+ G +P+ TY ++I FC + + GL++ M
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 4/267 (1%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
I++ + A + + +R P +F IL + + A +VF M E
Sbjct: 158 INVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEV 217
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKT-FRGRFRCDSVSYNIIANGWCLIKRTPMALQ 237
+ + ++N+++ LC+ + A SL + + R R ++V++ ++ G C A +
Sbjct: 218 QPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKK 277
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
++ +M RG P +V Y L+ + ++ EA EMKKR+ + DVV Y +V+
Sbjct: 278 LMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC 337
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
V ++ RV EM G P+ ATY +I C+ + + L V M+ P
Sbjct: 338 TECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPA 397
Query: 358 TYNVVIRGLCHSGDMERA---VEYMGR 381
T+ ++ GL G+++ A +E MG+
Sbjct: 398 TFVCMVAGLIKGGNLDHACFVLEVMGK 424
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 138/314 (43%), Gaps = 41/314 (13%)
Query: 199 EMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
E A SLF ++ FR D SY+ + + Q+L+ + R + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK----------- 306
++ Y + + +A + F ++ C + + T+++ GE++K+K
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 307 ------------------------RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL 342
+VFDEM+ + PSV TYN+LI LC+ D + A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+ E+M+ K PN T+ ++++GLC G+ A + M ME G +P + Y +++
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
G I++ + +M P++ YN+L++ + + + A ++L EM +G
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIK--PDVVIYNILVNHLCTECRVPE---AYRVLTEMQMKGC 357
Query: 463 LPRKFTFNRVLNGL 476
P T+ +++G
Sbjct: 358 KPNAATYRMMIDGF 371
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 175/396 (44%), Gaps = 12/396 (3%)
Query: 105 HPTYIHSPSGFEHAIDI--AARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGK 162
H ++PS F + + + R + + A L MR P ++ L + G
Sbjct: 146 HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 163 PHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNI 221
A+ M + DL ++ ++++ + A S+F R D V+YN
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNS 265
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
+ N + K A ++KEM E G+ P V+Y+TLL Y H+ EA F EMK+
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
C +D+ T M+ +G VK++ R+F + + + P+V +YN +++V + + A+
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
+F M K N+ TYN +I+ + + E+A + M+ GI P+ TY+ +I +
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
AG++++ ++F+K+ ++ VL M V + L+ K L+ +
Sbjct: 446 GKAGKLDRAATLFQKLRSSG------VEIDQVLYQTMIVAYERVGLMGHAKRLLHELK-- 497
Query: 462 FLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
LP + LA G E A + R G
Sbjct: 498 -LPDNIPRETAITILAKAGRTEEATWVFRQAFESGE 532
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 178/450 (39%), Gaps = 78/450 (17%)
Query: 83 EVLKRLWNHGPKALQFFKHLDRHPTYIHSPS--GFEHAIDIAARMRDYTTAWTLVSRMRS 140
E+ +RL ++ KA+ F L R +P + I++ + + + A L+ M
Sbjct: 233 ELSRRLCDYS-KAISIFSRLKRSGI---TPDLVAYNSMINVYGKAKLFREARLLIKEMNE 288
Query: 141 LRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
P +++ L Y K A+ VF M E C DL + N ++DV + V+
Sbjct: 289 AGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKE 348
Query: 201 AHSLFKTFRG-RFRCDSVSYNIIANGWC-------------LIKRTPM------------ 234
A LF + R + VSYN I + L++R +
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 235 ----------ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
A +++EM RGI P +TY+T++ + + +L A F +++ EI
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468
Query: 285 DVVTYTTMVHGF-------------------------------GVAGEVKKSKRVFDEMV 313
D V Y TM+ + AG +++ VF +
Sbjct: 469 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAF 528
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
+G V ++ + +I + + N + VFE+M G P+ N +V+ + E
Sbjct: 529 ESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFE 588
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNV 433
+A M++ G + + ++ + + E S+F+++ PN+++ +
Sbjct: 589 KADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESD-----PNVNSKEL 643
Query: 434 LISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
+ + ++++ L A +++ M +RG L
Sbjct: 644 HLVVAALYERADKLNDASRVMNRMRERGIL 673
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 24/444 (5%)
Query: 65 LAEALENSPFRWTPE----LVDEVLKRLWNHGPKALQFFKHLD-RHPTYIHSPSG--FEH 117
+A+ L+ + TP +V V + W +AL+ F+ L+ RH HSP+
Sbjct: 143 VADILDARLVQMTPTDYCFVVKSVGQESWQ---RALEVFEWLNLRH---WHSPNARMVAA 196
Query: 118 AIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHG 177
+ + R + A + +R G + + + Y+ +GK +A + +M + G
Sbjct: 197 ILGVLGRWNQESLAVEIFTRAEP-TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRG 255
Query: 178 CRQDLNSFNTILDVLCKTKRV--EMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPM 234
C DL SFNT+++ K+ + +A L R R D+++YN + +
Sbjct: 256 CVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDG 315
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A++V ++M P + TYN ++ Y RC EA F+E++ + D VTY ++++
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG-KGCV 353
F +K K V+ +M + G TYN +I + K+ + AL ++++M G G
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P+ TY V+I L + A M M GI+P++QTY+ +I + AG+ E+
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
F M P+ Y+V++ + + + A L +M+ G P + ++
Sbjct: 496 FSCMLRSGTK--PDNLAYSVMLDVLL---RGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 474 NGLALTG-NQEFAKEILRMQSRCG 496
GL + + K I M+ CG
Sbjct: 551 LGLMKENRSDDIQKTIRDMEELCG 574
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 148/314 (47%), Gaps = 8/314 (2%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMA 243
+ I++ K K + A S+ R R D ++N + + + A + M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
G SPT+ + N LL +L E + E++ +I + M+ F AG +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
+ K+++ M AG +P++ Y +I++LCK V++A ++ EM L +N ++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
+ D ++ V+ R+++ G+ P TYN +I +C E+G + ++M +
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF-LPRKFTFNRVLNGLALTGNQ 482
P LDTY LISA F ++K L A +L E++ +G L R F ++ ++ +G+
Sbjct: 995 --PKLDTYKSLISA-FGKQKC--LEQAEQLFEELLSKGLKLDRSF-YHTMMKISRDSGSD 1048
Query: 483 EFAKEILRMQSRCG 496
A+++L+M G
Sbjct: 1049 SKAEKLLQMMKNAG 1062
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 17/329 (5%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIAN 224
AV+VF M H C+ DL ++N ++ V + A LF + F D+V+YN +
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKC-E 283
+ + T +V ++M + G +TYNT++ Y + QL A + + +MK
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
D +TYT ++ G A ++ + EM+ G+ P++ TY+ALI K + A
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCD 403
F M+ G P+ Y+V++ L + +A M G PS Y ++I
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 404 ---AGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
+ +I+K + E++ C P + IS++ V+ + DL A + L +
Sbjct: 556 ENRSDDIQKTIRDMEEL----CGMNP------LEISSVLVKGECFDL--AARQLKVAITN 603
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
G+ T +L + +G A E+L
Sbjct: 604 GYELENDTLLSILGSYSSSGRHSEAFELL 632
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 140/322 (43%), Gaps = 3/322 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ I+ + + + A ++V +R R P + + L YA G RA +F +M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTP 233
G + S N +L LC R+E + + + + F+ S ++ + +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
++ M G PT+ Y +++ + ++R+A EM++ ++++ + +M+
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
+ + KK+ +V+ + GL P TYN LI + C+ + L+ ++M G
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P L+TY +I +E+A + + G++ Y+ +++ D+G K +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 414 FEKMGDGSCSCLPNLDTYNVLI 435
+ M + P L T ++L+
Sbjct: 1055 LQMMKNAGIE--PTLATMHLLM 1074
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 161/358 (44%), Gaps = 12/358 (3%)
Query: 117 HAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEH 176
HA+ + R+ + + +V ++ + + + ++ + +A AG +++ SM
Sbjct: 830 HALCVDGRLEEL---YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA 886
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIKRTPMA 235
G + + ++++LCK KRV A + F+ + +N + + I+
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKT 946
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
+QV + + E G+ P TYNTL+ Y R + E + +M+ + + TY +++
Sbjct: 947 VQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISA 1006
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
FG +++++++F+E++ GL + Y+ ++++ A + + M G P
Sbjct: 1007 FGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPT 1066
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
L T ++++ SG+ + A + + ++ + + Y+ VI + + + G+
Sbjct: 1067 LATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLL 1126
Query: 416 KMGDGSCSCLPNLDTYNVLI-SAMFVRKKSEDLVVAGKLLIEMVDRGF-LPRKFTFNR 471
+M P+ + + +A F ++K E ++ LL + D GF LP + R
Sbjct: 1127 EMKKEGLE--PDHRIWTCFVRAASFSKEKIEVML----LLKALEDIGFDLPIRLLAGR 1178
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + L +A + V+ M + G +D ++NTI+ + K ++++A L
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 205 FKTFRGRF--RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
+K +G D+++Y ++ + RT A ++ EM + GI PT+ TY+ L+ GY
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ + EA + F M + + D + Y+ M+ E +K+ ++ +M+ G PS
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Query: 323 TYNALIQVLCKK---DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
Y +I L K+ D +Q + EE+ G + L +V+++G C
Sbjct: 545 LYELMILGLMKENRSDDIQKTIRDMEELCG---MNPLEISSVLVKGEC 589
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y T++H ++ +VF ++ +G S + +++ V CK + A V +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 349 GKG----CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
KG C P Y +I ++A +G + + G P ++T+N ++ +
Sbjct: 744 TKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 405 GEIEKGLSMFEK-MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
G E+ ++F M DG P +++ N+L+ A+ V + E+L V ++ E+ D GF
Sbjct: 801 GCYERARAIFNTMMRDGPS---PTVESINILLHALCVDGRLEELYV---VVEELQDMGFK 854
Query: 464 PRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
K + +L+ A GN K+I G+
Sbjct: 855 ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 201/454 (44%), Gaps = 42/454 (9%)
Query: 61 DPGTLAEALENSPFRWTPELVDEVLKRLWNHGPK-ALQFFKHLDRHPTYIHSPSGFEHAI 119
D G L A+ T +++ E+ GP + FF D P+ HS I
Sbjct: 35 DSGLLKSAI-------TTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMI 87
Query: 120 DIAARMRDYTTAWTLVSRM------------RSLRRGPT------PRAFAILAERYAAAG 161
I + + + TA L+ ++ RSL G + F+ L YA AG
Sbjct: 88 LILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAG 147
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVS--- 218
+ ++ VF + G + L + +L+ L K + + +++K F+ + V+
Sbjct: 148 MINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQR---LTDTVWKIFKKMVKLGVVANIH 204
Query: 219 -YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM 277
YN++ + A ++L EM E+G+ P + TYNTL+ Y + EA M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 278 KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCV 337
++ ++VTY + +HGF G ++++ R+F E ++ + + TY LI C+ + +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 338 QNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVV 397
AL + E M +G P + TYN ++R LC G + A + M I P T N +
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 398 IRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEM 457
I +C ++ + + +KM + ++ +Y LI K +L A + L M
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKL--DMYSYKALIHGFC---KVLELENAKEELFSM 438
Query: 458 VDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
+++GF P T++ +++G NQ EI ++
Sbjct: 439 IEKGFSPGYATYSWLVDGFY---NQNKQDEITKL 469
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 144/332 (43%), Gaps = 37/332 (11%)
Query: 121 IAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQ 180
+ R+ D T W + +M L + +L + +G P +A ++ M E G
Sbjct: 179 VKQRLTD--TVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFP 236
Query: 181 DLNSFNTILDVLCKTK-----------------------------------RVEMAHSLF 205
D+ ++NT++ V CK R+ A LF
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Query: 206 KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCH 265
+ + + V+Y + +G+C + AL++ + M RG SP +VTYN++L+
Sbjct: 297 REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 266 QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
++REA EM +K E D +T T+++ + ++ + +V +M+ +GL + +Y
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
ALI CK ++NA M+ KG P TY+ ++ G + + + + EK
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
G+ V Y +IR C +++ +FE M
Sbjct: 477 GLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 19/306 (6%)
Query: 109 IHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR--AFAILAERYAAAGKPHRA 166
I + + F H RMR+ T + R ++ T + L + Y A
Sbjct: 273 IVTYNSFIHGFSREGRMREATRLF------REIKDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 167 VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANG 225
+R+ M G + ++N+IL LC+ R+ A+ L G+ D+++ N + N
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
+C I+ A++V K+M E G+ M +Y L+ G+ + +L A E M ++
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
TY+ +V GF + + ++ +E + GL VA Y LI+ +CK + V A ++FE
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFE 506
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY----------N 395
M KG V + + + +G + A M + +++ Y N
Sbjct: 507 SMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDN 566
Query: 396 VVIRYF 401
V+R+F
Sbjct: 567 DVLRFF 572
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMAL 236
+ D+ I+D LCK A +LF +G F + ++YN + + +C R A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFP-NVLTYNCMIDSFCHSGRWSDAD 65
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
Q+L+ M E+ I+P +VT++ L+ + + ++ EA E + EM + +TY +M+ GF
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
V +KR+ D M G P V T++ LI CK V N + +F EM +G V N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
TY +I G C GD++ A + + M G+ P T++ ++ C E+ K ++ E
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 417 M 417
+
Sbjct: 246 L 246
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-TFRGR 211
+ +R G A +F MHE G ++ ++N ++D C + R A L + +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
D V+++ + N + ++ A ++ KEM I PT +TYN+++ G+ + ++ +A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
M + C DVVT++T+++G+ A V +F EM R G+V + TY LI
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
C+ + A + EM+ G P+ T++ ++ GLC ++ +A + ++K
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 44/270 (16%)
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
+ + D V I + C A + EM E+GI P ++TYN ++ + CH R
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSF--CHSGR 60
Query: 269 --EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+A + M +++ D+VT++ +++ F +V +++ ++ EM+R + P+ TYN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
+I CK+D V +A + + M KGC P++ T++ +I G C + ++ +E M + G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
I + TY +I FC G D
Sbjct: 181 IVANTVTYTTLIHGFCQVG----------------------------------------D 200
Query: 447 LVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
L A LL EM+ G P TF+ +L GL
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
M + + DVV T +V G ++ +F EM G+ P+V TYN +I C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 337 VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNV 396
+A + M+ K P++ T++ +I + A E M + I P+ TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
+I FC ++ M + M CS P++ T++ LI+ K+ ++ ++ E
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCS--PDVVTFSTLINGYCKAKRVDN---GMEIFCE 175
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
M RG + T+ +++G G+ + A+++L CG A
Sbjct: 176 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
++ A L+ M + P F+ L + K A ++ M ++N+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
++D CK RV+ A + + + C D V+++ + NG+C KR +++ EM R
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
GI VTY TL+ G+ + L A + EM D +T+ M+ G E++K+
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 306 KRVFDEMVRA 315
+ +++ ++
Sbjct: 240 FAILEDLQKS 249
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F I+ + R + A + M PT + + + + + A R+ SM
Sbjct: 83 FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMA 142
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTP 233
GC D+ +F+T+++ CK KRV+ +F + R ++V+Y + +G+C +
Sbjct: 143 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 202
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
A +L EM G++P +T++ +L G +LR+A+ +++K +
Sbjct: 203 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 185/417 (44%), Gaps = 11/417 (2%)
Query: 79 ELVDEVLKRLWNHG--PKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVS 136
E +E+L L ++G A + + + RH H PS + + AR+ A ++
Sbjct: 105 ETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPS-CSNLVRGLARIDQLDKAMCILR 163
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTK 196
M P + ++ G A+ + M G D+ ++NT++ +
Sbjct: 164 VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYG 223
Query: 197 RVEMAHSLFKTFRGRFRCDS--VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
E A +K + + C ++Y ++ C + A++VL++MA G P +VTY
Sbjct: 224 NAEQAIRFWKD-QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
N+L+ R L E + E++ VTY T++H + + + + M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
P+V TYN LI LCK + A+ F +M+ + C+P++ TYN V+ + G ++
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
A+E +G ++ P + TYN VI G ++K L ++ +M D P+ T L
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI--FPDDITRRSL 460
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
I E+ AG++L E +RG R T+ V+ GL E A E++ +
Sbjct: 461 IYGFCRANLVEE---AGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 10/320 (3%)
Query: 125 MRDYTTAWTLVSRMRS-LRRGPTP--RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQD 181
M DY A + + L+ G P + +L E RA+ V M GC D
Sbjct: 219 MFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLK 240
+ ++N++++ C+ +E S+ + ++V+YN + + C + ++L
Sbjct: 279 IVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN 338
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
M + PT++TYN L+ G + L A +FF +M ++KC D+VTY T++ G
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
V + + + P + TYN++I L KK ++ AL ++ +M+ G P+ T
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458
Query: 361 VVIRGLCHSGDMERAVEYMGRMEK--HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
+I G C + +E A + + +GIR S TY +VI+ C EIE + + E M
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGS--TYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 419 DGSCSCLPNLDTYNVLISAM 438
G C P+ Y ++ +
Sbjct: 517 TGGCK--PDETIYTAIVKGV 534
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 159/374 (42%), Gaps = 8/374 (2%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
T A LV M + P + + L A + +A+ + M G D ++N I
Sbjct: 121 TDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMI 180
Query: 189 LDVLCKTKRVEMAHSLFK--TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG 246
+ LCK + A L + + G D ++YN + A++ K+ + G
Sbjct: 181 IGNLCKKGHIRTALVLLEDMSLSGSPP-DVITYNTVIRCMFDYGNAEQAIRFWKDQLQNG 239
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
P M+TY L++ R A E +M C D+VTY ++V+ G +++
Sbjct: 240 CPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVA 299
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
V ++ GL + TYN L+ LC + + M P + TYN++I GL
Sbjct: 300 SVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGL 359
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C + + RA+++ +M + P + TYN V+ G ++ + + + + C P
Sbjct: 360 CKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCP--P 417
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
L TYN +I + K + A +L +M+D G P T ++ G E A
Sbjct: 418 GLITYNSVIDGL---AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 487 EILRMQSRCGHALR 500
++L+ S G+ +R
Sbjct: 475 QVLKETSNRGNGIR 488
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 18/320 (5%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV----SYNIIANGWCLIKRTPM 234
D + N IL LC ++ A L + R + V S + + G I +
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMA---RHNQVPHFPSCSNLVRGLARIDQLDK 157
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A+ +L+ M G P +TYN ++ + +R A +M DV+TY T++
Sbjct: 158 AMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR 217
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G +++ R + + ++ G P + TY L++++C+ A+ V E+M +GC P
Sbjct: 218 CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYP 277
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA---GEIEKGL 411
++ TYN ++ C G++E + + HG+ + TYN ++ C E+E+ L
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
++ + S P + TYN+LI+ + K+ L A +M+++ LP T+N
Sbjct: 338 NIMYQT-----SYCPTVITYNILINGLC---KARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 472 VLNGLALTGNQEFAKEILRM 491
VL ++ G + A E+L +
Sbjct: 390 VLGAMSKEGMVDDAIELLGL 409
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 36/252 (14%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SY 219
G V + HG + ++NT+L LC + + + C +V +Y
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITY 352
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
NI+ NG C + A+ +M E+ P +VTYNT+L + + +A E +K
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV------------------ 321
C ++TY +++ G G +KK+ ++ +M+ AG+ P
Sbjct: 413 TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEE 472
Query: 322 -----------------ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
+TY +IQ LCKK ++ A+ V E M+ GC P+ Y +++
Sbjct: 473 AGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVK 532
Query: 365 GLCHSGDMERAV 376
G+ G AV
Sbjct: 533 GVEEMGMGSEAV 544
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 13/231 (5%)
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
+F L E D T ++H G++ + ++ + M R VP + + L++ L
Sbjct: 90 QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
+ D + A+ + MV G VP+ TYN++I LC G + A+ + M G P V
Sbjct: 150 ARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDV 209
Query: 392 QTYNVVIRYFCDAGEIEKGLSMF-EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVA 450
TYN VIR D G E+ + + +++ +G C P + TY VL+ + S +
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNG---CPPFMITYTVLVELVCRYCGSARAI-- 264
Query: 451 GKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHALRH 501
++L +M G P T+N ++N GN E +++ H L H
Sbjct: 265 -EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQ------HILSH 308
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 135/267 (50%), Gaps = 3/267 (1%)
Query: 173 MHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKR 231
+ E G D ++FN + L K + +F F R + Y ++ +R
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR 405
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
+ LK+M G+ ++ +YN ++ + ++ A F EM+ R ++VT+ T
Sbjct: 406 FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
+ G+ V G+VKK V ++++ G P V T++ +I LC+ +++A F+EM+ G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
PN TYN++IR C +GD +R+V+ +M+++G+ P + YN I+ FC +++K
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ + M P+ TY+ LI A+
Sbjct: 586 ELLKTM--LRIGLKPDNFTYSTLIKAL 610
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 173/421 (41%), Gaps = 47/421 (11%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ ID + A+ +MRS P + IL G A+R+ M
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMA---------------HSLFKTF-RGRFRC---- 214
+ G R ++ ++ ++D RV+ A + +TF G FRC
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPC 302
Query: 215 ------------DS----VSYNIIANGWCLIKRTPMAL---QVLKEMAERGISPTMVTYN 255
DS V Y+ + +CL MA Q L+++ ERG P T+N
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGYDAVL--YCL-SNNSMAKETGQFLRKIGERGYIPDSSTFN 359
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
+ + H L E F R + Y +V A + R +M
Sbjct: 360 AAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
GL+ SV +YNA+I LCK ++NA + EM +G PNL T+N + G GD+++
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
+ ++ HG +P V T++++I C A EI+ F++M + PN TYN+LI
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE--PNEITYNILI 537
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
+ ++ V KL +M + G P + +N + + A+E+L+ R
Sbjct: 538 RSCCSTGDTDRSV---KLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRI 594
Query: 496 G 496
G
Sbjct: 595 G 595
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 6/333 (1%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P+ R + + + + A F M GC+ D ++N ++ +CK V+ A L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 205 FKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
K R + +Y I+ +G+ + R AL+ L+ M R ++P T T + G FR
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
C +A+E + ++ + V Y +++ K++ + ++ G +P +T
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+NA + L K + +F+ V +G P N Y V+++ L ++ Y+ +M
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
G+ SV +YN VI C A IE +M D S PNL T+N +S VR
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS--PNLVTFNTFLSGYSVRG- 474
Query: 444 SEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
D+ +L +++ GF P TF+ ++N L
Sbjct: 475 --DVKKVHGVLEKLLVHGFKPDVITFSLIINCL 505
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 4/319 (1%)
Query: 82 DEVLKRLWNH--GPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMR 139
D VL L N+ + QF + + YI S F A+ + D +
Sbjct: 324 DAVLYCLSNNSMAKETGQFLRKIGER-GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 140 SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
S P + +L + A + R M G + S+N ++D LCK +R+E
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 200 MAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
A + R + V++N +G+ + VL+++ G P ++T++ ++
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
R ++++A++ F EM + E + +TY ++ G+ +S ++F +M GL
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P + YNA IQ CK V+ A + + M+ G P+ TY+ +I+ L SG A E
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 379 MGRMEKHGIRPSVQTYNVV 397
+E+HG P T +V
Sbjct: 623 FSSIERHGCVPDSYTKRLV 641
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 34/247 (13%)
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
FR L + E E++ I ++ +G G K VF ++ G+ PS
Sbjct: 121 FRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPST 180
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
YNA+I L K + + A L F++M GC P+ TYN++I G+C G ++ A+ + +
Sbjct: 181 RLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQ 240
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG---------------DGSCSCLP 426
ME+ G RP+V TY ++I F AG +++ L E M G CLP
Sbjct: 241 MEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLP 300
Query: 427 NLDTYNVLISAMFVRKKSE------DLVV-----------AGKLLIEMVDRGFLPRKFTF 469
+ VL+ F+ K S D V+ G+ L ++ +RG++P TF
Sbjct: 301 PCKAFEVLVG--FMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTF 358
Query: 470 NRVLNGL 476
N ++ L
Sbjct: 359 NAAMSCL 365
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 7/245 (2%)
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR 280
++ W + V +++ G+ P+ YN ++ + + L A+ F +M+
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 281 KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
C+ D TY ++HG G V ++ R+ +M + G P+V TY LI V A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM-GRMEKHGIRPSVQTYNVVIR 399
L E M + PN T + G+ +A E + G MEK V Y+ V+
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRV-GYDAVLY 328
Query: 400 YFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD 459
+ ++ K+G+ +P+ T+N +S + K DLV ++ V
Sbjct: 329 CLSNNSMAKETGQFLRKIGER--GYIPDSSTFNAAMSCLL---KGHDLVETCRIFDGFVS 383
Query: 460 RGFLP 464
RG P
Sbjct: 384 RGVKP 388
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 171/359 (47%), Gaps = 21/359 (5%)
Query: 126 RDYTTAWTLVSR--MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
RD + L+ R +R+ P+ F L R+ G+ A+ V M +
Sbjct: 111 RDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFD 170
Query: 184 SF--NTILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMALQVL 239
+F + ++ CK + E+A F++ G + V+Y + + C + + ++
Sbjct: 171 NFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLV 230
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+ + + G V Y+ + GYF+ L +A EM ++ DVV+Y+ ++ G
Sbjct: 231 RRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKE 290
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
G V+++ + +M++ G+ P++ TY A+I+ LCK ++ A ++F ++ G + Y
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
+I G+C G++ RA +G ME+ GI+PS+ TYN VI C AG + + +
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-------DE 403
Query: 420 GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
S + ++ TY+ L+ + +++ ++ D V+ + R FL K + V+ + L
Sbjct: 404 VSKGVVGDVITYSTLLDS-YIKVQNIDAVLE-------IRRRFLEAKIPMDLVMCNILL 454
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%)
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
S ++ Y ++ G + L +A K R ++ +TY ++++G G + ++ R
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+FD + GLVPS TY LI LCK+ +A + + MV KG VPN+ YN ++ G C
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
G E A+ + R + P T + +I+ +C G++E+ LS+F + D + S
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 158/383 (41%), Gaps = 64/383 (16%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
FE A+D + + T TLVS + L + R L R G V F S
Sbjct: 194 FESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD---LVRRLEDEGFEFDCV--FYSNW 248
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM 234
HG + ++D L + + EM +G R D VSY+I+ +G
Sbjct: 249 IHGYFKG----GALVDALMQDR--EMVE------KGMNR-DVVSYSILIDGLSKEGNVEE 295
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
AL +L +M + G+ P ++TY +++G + +L EA+ F + E+D Y T++
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G G + ++ + +M + G+ PS+ TYN +I LC V A + V KG V
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVG 410
Query: 355 NLNTY-----------------------------------NVVIRGLCHSGDMERAVEYM 379
++ TY N++++ G A
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMF 439
M + + P TY +I+ +C G+IE+ L MF ++ S S YN +I A+
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV---CYNRIIDALC 527
Query: 440 VRKKSEDLVVAGKLLIEMVDRGF 462
K L A ++LIE+ ++G
Sbjct: 528 ---KKGMLDTATEVLIELWEKGL 547
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 142/344 (41%), Gaps = 33/344 (9%)
Query: 83 EVLKRLWNHGPKALQFFKHLDRHPT-----YIHSPSGFEHAIDIAARMRDYTTAWTLVSR 137
EVL LW G +LD H + IH+ G + + + + + L
Sbjct: 537 EVLIELWEKGL-------YLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL--- 586
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
G A +L +R G A+ V++ M G S TIL L R
Sbjct: 587 ------GMLNDAILLLCKR----GSFEAAIEVYMIMRRKGLTVTFPS--TILKTLVDNLR 634
Query: 198 VEMAHSLFKTFRGRF---RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
A+ L G D + Y II NG C AL + RG++ +TY
Sbjct: 635 SLDAY-LLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITY 693
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
N+L+ G + L EA F ++ VTY ++ G ++++ D MV
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNAL-LVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
GLVP++ YN+++ CK ++A+ +V +M+G+ P+ T + +I+G C GDME
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDME 812
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
A+ + I + +I+ FC G +E+ + +M
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 45/277 (16%)
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGI-SPTMVTYNTLLKGYFRCHQLREAWEF 273
D+ + + +G+C I + +AL + + G+ P +VTY TL+ + ++ E +
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDL 229
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
++ E D V Y+ +HG+ G AL+
Sbjct: 230 VRRLEDEGFEFDCVFYSNWIHGYFKGG-------------------------ALV----- 259
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
+AL+ EMV KG ++ +Y+++I GL G++E A+ +G+M K G+ P++ T
Sbjct: 260 -----DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLIT 314
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT--YNVLISAMFVRKKSEDLVVAG 451
Y +IR C G++E+ +F ++ S +D Y LI + RK +L A
Sbjct: 315 YTAIIRGLCKMGKLEEAFVLFNRI----LSVGIEVDEFLYVTLIDGI-CRKG--NLNRAF 367
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+L +M RG P T+N V+NGL + G A E+
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 159/386 (41%), Gaps = 34/386 (8%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
+M A+ L +R+ S+ + L + G +RA + M + G + +
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
++NT+++ LC RV A + K G D ++Y+ + + + ++ L++ +
Sbjct: 384 TYNTVINGLCMAGRVSEADEVSKGVVG----DVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
E I +V N LLK + EA + M + D TY TM+ G+ G+++
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIE 499
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++ +F+E+ R V + YN +I LCKK + A V E+ KG +++T ++
Sbjct: 500 EALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
+ +G + + + +E+ + N I C G E + ++ M +
Sbjct: 559 HSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT 618
Query: 424 C-------------LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF--- 467
L +LD Y ++++A S D++ ++ + GFL +
Sbjct: 619 VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLC 678
Query: 468 -------------TFNRVLNGLALTG 480
T+N ++NGL G
Sbjct: 679 SFAKSRGVTLNTITYNSLINGLCQQG 704
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 7/276 (2%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID ++ + A L+ +M P + + GK A +F + G
Sbjct: 284 IDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGI 343
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQ 237
D + T++D +C+ + A S+ R + ++YN + NG C+ R A +
Sbjct: 344 EVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE 403
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
V +G+ ++TY+TLL Y + + E + K +D+V ++ F
Sbjct: 404 V-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFL 458
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
+ G ++ ++ M L P ATY +I+ CK ++ AL +F E+ K V
Sbjct: 459 LMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAV 517
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
YN +I LC G ++ A E + + + G+ + T
Sbjct: 518 CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHT 553
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 165 RAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIA 223
A+R+F S+ G ++ ++D LCK A L + + + + YN I
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
+G+C + +T A++V+ ++P T ++++KGY + + EA F E K +
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEM------------VRAGLVPSVATYNALIQVL 331
D + ++ GF G +++++ + EM V A L S + L++ L
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE-L 886
Query: 332 CKKDCVQNALLVF----------------------------EEMVGKGCVPNLNTYNVVI 363
C++ V A+ + EE+ K V + ++ + +
Sbjct: 887 CEQGRVPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTV 946
Query: 364 RGLCHSGDMERAVEYM 379
LC SG +E+A E++
Sbjct: 947 SSLCTSGKLEQANEFV 962
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
L RT L L+ + + G SPT+ + + L+ +R + +F+ ++ ++ I+
Sbjct: 3 LYPRTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHR 62
Query: 288 TYTTMVHGFGVAGEVKKSKRVFD-EMVRAGLVPSVATYNALIQ--VLCKKDCVQNALLVF 344
Y+ + F + +++ + + +A + P ++LI + + D + L++
Sbjct: 63 IYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILR 122
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY--NVVIRYFC 402
+ + G P+ T+ +I G+M+ A+E + M + + + VI FC
Sbjct: 123 DCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFC 182
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
G+ E L FE D S +PNL TY L+SA+
Sbjct: 183 KIGKPELALGFFESAVD-SGVLVPNLVTYTTLVSAL 217
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 34/309 (11%)
Query: 115 FEHAIDIAARMR--------DYTTAWTLVSRMRSL-------RRGPTPRA------FAIL 153
FE AI++ MR T TLV +RSL G T + + I+
Sbjct: 602 FEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTII 661
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFR 213
G +A+ + G + ++N++++ LC+ + A LF +
Sbjct: 662 INGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGL 721
Query: 214 CDS-VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
S V+Y I+ + C A ++L M +G+ P ++ YN+++ GY + Q +A
Sbjct: 722 VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMR 781
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
+ D T ++M+ G+ G+++++ VF E + + LI+ C
Sbjct: 782 VVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFC 841
Query: 333 KKDCVQNALLVFEEM-VGKGCVPNLNTYNV------VIRG----LCHSGDMERAVEYMGR 381
K ++ A + EM V + V +N + IRG LC G + +A++ +
Sbjct: 842 TKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDE 901
Query: 382 MEKHGIRPS 390
+ I PS
Sbjct: 902 ISST-IYPS 909
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 171/369 (46%), Gaps = 10/369 (2%)
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
R W + +M + F L + + G A+ + M + G R + +
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVY 382
Query: 186 NTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
NT++D K+ +E LF R + + + +YNI+ + + + + +L+EM +
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 245 RGISPTMVTYNTLLKGYFRCHQLRE-AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
G+ P + +Y L+ Y R ++ + A + FL MKK + +YT ++H + V+G +
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
K+ F+EM + G+ PSV TY +++ + + +++ M+ + TYN ++
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
G G A + + K G++PSV TYN+++ + G+ K + ++M + +
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM--AALN 620
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR---VLNGLALTG 480
P+ TY+ +I A FVR + D A MV G +P ++ + +L A T
Sbjct: 621 LKPDSITYSTMIYA-FVRVR--DFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTK 677
Query: 481 NQEFAKEIL 489
N++ IL
Sbjct: 678 NRKDKTAIL 686
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 155/323 (47%), Gaps = 14/323 (4%)
Query: 180 QDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMAL-Q 237
+D+ +N + L ++R + A +++ + D+V+ I+ R+ + +
Sbjct: 271 RDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWE 330
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+ ++M+E+G+ + + L+K + EA EM+K+ + + Y T++ +
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK---DCVQNALLVFEEMVGKGCVP 354
+ +++ + +F EM GL PS ATYN L+ ++ D V+ L E++ G P
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDL---GLEP 447
Query: 355 NLNTYNVVIRGLCHSGDM-ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
N+ +Y +I + M + A + RM+K G++PS +Y +I + +G EK +
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
FE+M P+++TY ++ A + L+ KL++ +G + T+N +L
Sbjct: 508 FEEMCKEGIK--PSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG---TRITYNTLL 562
Query: 474 NGLALTGNQEFAKEILRMQSRCG 496
+G A G A++++ S+ G
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMG 585
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 2/251 (0%)
Query: 111 SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGK-PHRAVRV 169
S + + +D AR TL+ M L P +++ L Y K A
Sbjct: 413 SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA 472
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCL 228
F+ M + G + +S+ ++ + E A++ F+ + + +Y + + +
Sbjct: 473 FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRR 532
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
T +++ K M I T +TYNTLL G+ + EA + E K + V+T
Sbjct: 533 SGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMT 592
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
Y +++ + G+ K ++ EM L P TY+ +I + + A + MV
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 349 GKGCVPNLNTY 359
G VP+ +Y
Sbjct: 653 KSGQVPDPRSY 663
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 155/343 (45%), Gaps = 10/343 (2%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCD 215
+A +G P +A+++ G + +I+ L + R A +LF+ R +
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 216 SVSYNIIANGWCLIKRTPM--ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
+ +YN + G+ +K P+ A ++ EM +RG+SP TY+ L+ Y + A
Sbjct: 339 TRAYNALLKGY--VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
EM+ + + ++ ++ GF GE +K+ +V EM G+ P YN +I K
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
+C+ +A+ F+ M+ +G P+ T+N +I C G A E ME+ G P T
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKL 453
YN++I + D + + KM S LPN+ T+ L+ V KS A +
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKM--KSQGILPNVVTHTTLVD---VYGKSGRFNDAIEC 571
Query: 454 LIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
L EM G P +N ++N A G E A R+ + G
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 6/337 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A ++VS M P +++L + Y AG+ A V M + + F+ +L
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 191 VLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
+ + K + + D YN++ + + A+ M GI P
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
VT+NTL+ + + + A E F M++R C TY M++ +G KR+
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+M G++P+V T+ L+ V K +A+ EEM G P+ YN +I
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
G E+AV M G++PS+ N +I F + + ++ + M + P++
Sbjct: 598 GLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVK--PDVV 655
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
TY L+ A+ K + + V + EM+ G P +
Sbjct: 656 TYTTLMKALIRVDKFQKVPVVYE---EMIMSGCKPDR 689
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 157/355 (44%), Gaps = 11/355 (3%)
Query: 140 SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
S ++ TP + L A +A+ + M + G + D +++ ++ L ++ +++
Sbjct: 190 SQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKID 249
Query: 200 --MAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
M L+K R + D N I G+ ALQ+L G+S T +
Sbjct: 250 SVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVS 309
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
++ + EA F E+++ + Y ++ G+ G +K ++ + EM + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 317 LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
+ P TY+ LI ++A +V +EM PN ++ ++ G G+ ++
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLIS 436
+ + M+ G++P Q YNVVI F ++ ++ F++M S P+ T+N LI
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM--LSEGIEPDRVTWNTLID 487
Query: 437 AMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
+ +VA ++ M RG LP T+N ++N G+QE ++ R+
Sbjct: 488 CHCKHGRH---IVAEEMFEAMERRGCLPCATTYNIMINSY---GDQERWDDMKRL 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 40/320 (12%)
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
++ + ++ M+S+ P + + ++ + + A+ F M G D ++N
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 187 TILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
T++D CK R +A +F+ RG C + +YNI+ N + +R ++L +M
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPC-ATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
+GI P +VT+ TL+ Y + + +A E EMK
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS------------------------- 577
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
GL PS YNALI ++ + A+ F M G P+L N +I
Sbjct: 578 ----------VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
A + M+++G++P V TY +++ + +K ++E+M C
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK- 686
Query: 425 LPNLDTYNVLISAMFVRKKS 444
P+ ++L SA+ K++
Sbjct: 687 -PDRKARSMLRSALRYMKQT 705
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
L +M+S P+ + I+ GK A+ + M +L ++ LD
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 194 KTKRVEMAHSLFKT----FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
K KR A ++FKT + YN + C + T A V+ +M RG P
Sbjct: 655 KHKR---ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
VT+N+L+ GYF +R+A + M + +V TY T++ G AG +K+ +
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
EM G+ P TYNALI K ++ ++ ++ EM+ G VP +TYNV+I +
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
G M +A E + M K G+ P+ TY +I C
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 170/367 (46%), Gaps = 18/367 (4%)
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFIS-MHEHGCRQDLNS 184
R Y A TL S M + P R + L ++ G H V + S M G D+ +
Sbjct: 73 RLYGAARTL-SAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 131
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
N ++ CK R+ A SL R R D+V+YN + +G C A Q L EM
Sbjct: 132 LNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMV 188
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
+ GI P V+YNTL+ G+ + A E+ E++++T+T ++ + ++
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYNLHAIE 244
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++ R +MV +G P V T++++I LCK V L+ EM PN TY ++
Sbjct: 245 EAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 301
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
L + A+ +M GI + Y V++ AG++ + F+ + + +
Sbjct: 302 DSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ- 360
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
+PN+ TY L+ + K+ DL A ++ +M+++ +P T++ ++NG G E
Sbjct: 361 -VPNVVTYTALVDGLC---KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 484 FAKEILR 490
A +LR
Sbjct: 417 EAVSLLR 423
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 154/338 (45%), Gaps = 13/338 (3%)
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
MR P F I+ G ++++ M G + L S N ++ +LC+ +
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 198 VEMA-HSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
+E A H L + + +Y I + KR + + + GI + YNT
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
L+ + ++A +M+ R D VT+ +++HG+ V V+K+ + M+ AG
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 317 LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
+ P+VATYN +I+ L ++ EM +G P+ TYN +I G G+M+ ++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLIS 436
M G+ P TYNV+I F + G++ + + ++MG S PN TY +IS
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS--PNTSTYCTMIS 861
Query: 437 AMFV---------RKKSEDLVVAGKLLIEMV-DRGFLP 464
+ KK+ L A LL EMV ++G++P
Sbjct: 862 GLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMA------------------- 201
G A + M + G D S+NT++D CK A
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILL 234
Query: 202 ------HSLFKTFR----GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTM 251
H++ + +R F D V+++ I N C + +L+EM E + P
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 294
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
VTY TL+ F+ + R A + +M R +D+V YT ++ G AG+++++++ F
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
++ VP+V TY AL+ LCK + +A + +M+ K +PN+ TY+ +I G G
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+E AV + +ME + P+ TY VI AG+ E + + ++M
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 188/470 (40%), Gaps = 84/470 (17%)
Query: 87 RLWNHGPKALQFFKHLDRHPTYI---HSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRR 143
R+WN+ +FF R + I P E ++ I R D A SL
Sbjct: 3 RIWNNYKGKYRFFLSNCRSFSSIKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSL-- 60
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
F L Y + + + A R +M G D +N+++ V S
Sbjct: 61 ------FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVS 114
Query: 204 LF--KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
L K D + N++ + +C + R A+ +L+ R IS VTYNT++ G
Sbjct: 115 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGL 171
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE---------- 311
EA++F EM K D V+Y T++ GF G ++K + DE
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHT 231
Query: 312 ------------------MVRAGLVPSVATYNALIQVLC--------------------- 332
MV +G P V T++++I LC
Sbjct: 232 ILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 333 --------------KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
K + ++AL ++ +MV +G +L Y V++ GL +GD+ A +
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ + P+V TY ++ C AG++ + +M + S +PN+ TY+ +I+
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK--SVIPNVVTYSSMINGY 409
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ E+ V LL +M D+ +P FT+ V++GL G +E A E+
Sbjct: 410 VKKGMLEEAV---SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 179/441 (40%), Gaps = 77/441 (17%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
+D + D ++A ++++M P ++ + Y G AV + M +
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFR---------------------GRFR---- 213
+ ++ T++D L K + EMA L K R GR +
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 214 -----------CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
D ++Y + + + AL +EM ERG+ +V+YN L+ G
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 550
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ ++ W + M+++ E D+ T+ M++ G+ + +++D+M G+ PS+
Sbjct: 551 KFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 609
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT------------------------ 358
+ N ++ +LC+ ++ A+ + +M+ PNL T
Sbjct: 610 SCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETL 669
Query: 359 -----------YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
YN +I LC G ++A MG ME G P T+N ++ + +
Sbjct: 670 LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHV 729
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
K LS + M + S PN+ TYN +I + + + K L EM RG P F
Sbjct: 730 RKALSTYSVMMEAGIS--PNVATYNTIIRGL---SDAGLIKEVDKWLSEMKSRGMRPDDF 784
Query: 468 TFNRVLNGLALTGNQEFAKEI 488
T+N +++G A GN + + I
Sbjct: 785 TYNALISGQAKIGNMKGSMTI 805
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 163/354 (46%), Gaps = 19/354 (5%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ L + + G A+ M E G D+ S+N ++ + K +V A +K R
Sbjct: 507 YTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMR 565
Query: 210 GR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
+ D ++NI+ N + L++ +M GI P++++ N ++ ++
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME 625
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF---DEMVRAGLVPSVATYN 325
EA +M + ++ TY + + + K++ +F + ++ G+ S YN
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSYGIKLSRQVYN 682
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
LI LCK + A +V +M +G +P+ T+N ++ G + +A+ M +
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 386 GIRPSVQTYNVVIRYFCDAG---EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRK 442
GI P+V TYN +IR DAG E++K LS + G P+ TYN LIS +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG-----MRPDDFTYNALISG---QA 794
Query: 443 KSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
K ++ + + EM+ G +P+ T+N +++ A G A+E+L+ + G
Sbjct: 795 KIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG 848
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 156/364 (42%), Gaps = 36/364 (9%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + L + AG A + M E ++ +++++++ K +E A SL
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 205 FKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ + + +Y + +G + MA+++ KEM G+ + L+ R
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+++E +M + +D + YT+++ F G+ + + +EM G+ V +
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
YN LI + K V A ++ M KG P++ T+N+++ GD E ++ +M+
Sbjct: 542 YNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
GI+PS+ + N+V+ C+ G++E+ + + +M PNL TY + + K+
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM--MLMEIHPNLTTYRIFLDTSSKHKR 658
Query: 444 SEDLVVAGKLLI--------------------------------EMVDRGFLPRKFTFNR 471
++ + + L+ +M RGF+P TFN
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 718
Query: 472 VLNG 475
+++G
Sbjct: 719 LMHG 722
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 13/358 (3%)
Query: 139 RSLRRGPTPRAFA---ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT 195
R +++G P AF +L Y G AV++ + G +L S+N +L CK
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGT-DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKE 259
Query: 196 KRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
R + A +LF+ + F+ + VSYNI+ C R A +L EM +P++VTY
Sbjct: 260 GRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTY 319
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKK--RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
N L+ + +A + EM K + + +Y ++ G+V + DEM
Sbjct: 320 NILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Query: 313 VRAGLVPSVATYNALIQVLCKKDC-VQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
+ P+ TYNA I LC+ + VQ A + + + K + Y VI LC G+
Sbjct: 380 IYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 438
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
A + + M + G P TY+ +IR C G + + M + S +C P +D +
Sbjct: 439 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM-EESENCKPTVDNF 497
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
N +I + ++++ +A ++ MV++ +P + T+ ++ G+A E AKE+L
Sbjct: 498 NAMILGLCKIRRTD---LAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 161/340 (47%), Gaps = 8/340 (2%)
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVS 218
A + +A+RV M G D +++ +++ LCK V A L + + ++V+
Sbjct: 119 ANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVT 178
Query: 219 YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
YN + G C++ +LQ ++ + ++G++P TY+ LL+ ++ EA + E+
Sbjct: 179 YNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+ E ++V+Y ++ GF G + +F E+ G +V +YN L++ LC +
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK--HGIRPSVQTYNV 396
A + EM G P++ TYN++I L G E+A++ + M K H R + +YN
Sbjct: 299 EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNP 358
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
VI C G+++ + ++M C PN TYN + S K ++ A ++
Sbjct: 359 VIARLCKEGKVDLVVKCLDEMIYRRCK--PNEGTYNAIGSLCEHNSKVQE---AFYIIQS 413
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+ ++ + V+ L GN A ++L +RCG
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 137/282 (48%), Gaps = 4/282 (1%)
Query: 192 LCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
LCK R++ A + + D+ +Y + N C A+Q++++M + G
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
VTYN L++G L ++ +F + ++ + TY+ ++ ++ ++ D
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD 235
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
E++ G P++ +YN L+ CK+ +A+ +F E+ KG N+ +YN+++R LC G
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
E A + M+ PSV TYN++I G E+ L + ++M G+ +
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
YN +I A ++ DLVV K L EM+ R P + T+N +
Sbjct: 356 YNPVI-ARLCKEGKVDLVV--KCLDEMIYRRCKPNEGTYNAI 394
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 179/439 (40%), Gaps = 80/439 (18%)
Query: 93 PKALQFFKHLDRHPTYIHSPSGFEHAIDI------AARMRDYTTAWTLVSRMRSLRRGPT 146
P F HL+ T H P+ H+ + A R++ A ++ M S P
Sbjct: 85 PNLSDSFSHLESLVTGGHKPN-VAHSTQLLYDLCKANRLK---KAIRVIELMVSSGIIPD 140
Query: 147 PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK 206
A+ L + G A+++ M +HG
Sbjct: 141 ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG----------------------------- 171
Query: 207 TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
+ ++V+YN + G C++ +LQ ++ + ++G++P TY+ LL+ ++
Sbjct: 172 -----YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG 226
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
EA + E+ + E ++V+Y ++ GF G + +F E+ G +V +YN
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK-- 384
L++ LC + A + EM G P++ TYN++I L G E+A++ + M K
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLIS-------- 436
H R + +YN VI C G+++ + ++M C PN TYN + S
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK--PNEGTYNAIGSLCEHNSKV 404
Query: 437 --AMFVRK----------------------KSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
A ++ + + + A +LL EM GF P T++ +
Sbjct: 405 QEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSAL 464
Query: 473 LNGLALTGNQEFAKEILRM 491
+ GL L G A E+L +
Sbjct: 465 IRGLCLEGMFTGAMEVLSI 483
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 152/367 (41%), Gaps = 48/367 (13%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFA 151
++LQF + L + +P+ F ++ ++ A + R A L+ + P ++
Sbjct: 194 QSLQFVERLMQKGL---APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYN 250
Query: 152 ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR 211
+L + G+ A+ +F + G + ++ S+N +L LC R E A+SL G
Sbjct: 251 VLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG 310
Query: 212 FRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAE-------------------------- 244
R SV +YNI+ N RT ALQVLKEM++
Sbjct: 311 DRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVD 370
Query: 245 -----------RGISPTMVTYNTLLKGYFRCHQLREAWEFF--LEMKKRKCEIDVVTYTT 291
R P TYN + +++EA+ L K++ C D Y +
Sbjct: 371 LVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--YKS 428
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV-GK 350
++ G + ++ EM R G P TY+ALI+ LC + A+ V M +
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESE 488
Query: 351 GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
C P ++ +N +I GLC + A+E M + P+ TY +++ E+E
Sbjct: 489 NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Query: 411 LSMFEKM 417
+ +++
Sbjct: 549 KEVLDEL 555
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 6/346 (1%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
PT F + + P RA+ +F M ++ C++ + S N++L L K +E
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ + D+ +YNI+ +G AL++ EM ++ + PT VT+ TL+ G +
Sbjct: 141 LSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKD 200
Query: 265 HQLREAWEFFLEM-KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
+++EA + +M K V Y +++ GE+ + ++ DE + A
Sbjct: 201 SRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAI 260
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
Y+ LI L K ++ EEM KGC P+ TYNV+I G C D E A + M
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
+ G++P V +YN+++ F + E+ +FE M CS P+ +Y ++ + +
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS--PDTLSYRIVFDGLCEGLQ 378
Query: 444 SEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
E+ V +L EM+ +G+ PR+ L L +G E +++
Sbjct: 379 FEEAAV---ILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVI 421
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 11/308 (3%)
Query: 137 RMRSLRRGPTPRA--FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK 194
R+ S+ P A + IL + +G A+++F M + + +F T++ LCK
Sbjct: 140 RLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 195 TKRVE----MAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
RV+ M H + K + R Y + C I A ++ E E I
Sbjct: 200 DSRVKEALKMKHDMLKVYG--VRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVD 257
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
Y+TL+ + + E EM ++ C+ D VTY +++GF V + + + RV D
Sbjct: 258 AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLD 317
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
EMV GL P V +YN ++ V + + A +FE+M +GC P+ +Y +V GLC
Sbjct: 318 EMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGL 377
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
E A + M G +P ++ C++G++E + + G + D
Sbjct: 378 QFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAG---DADV 434
Query: 431 YNVLISAM 438
++V+I M
Sbjct: 435 WSVMIPTM 442
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 8/280 (2%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEM-AERGISPTMVTYNTLLKGYFRCHQLREA 270
FR + Y+II K QVL + + I PT + + ++ + R A
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRA 102
Query: 271 WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQV 330
F EM + +C+ V + +++ GE++K K + G P TYN LI
Sbjct: 103 LHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHG 161
Query: 331 LCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK-HGIRP 389
+ C +AL +F+EMV K P T+ +I GLC ++ A++ M K +G+RP
Sbjct: 162 CSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRP 221
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
+V Y +I+ C GE+ + ++ +G + Y+ LIS++ +S ++ +
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV--DAAIYSTLISSLIKAGRSNEVSM 279
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
+L EM ++G P T+N ++NG + + E A +L
Sbjct: 280 ---ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 164/340 (48%), Gaps = 9/340 (2%)
Query: 141 LRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
++RG P ++ G +RA+ F M + G + +L +F +++D LCK +
Sbjct: 244 IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303
Query: 199 EMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQV-LKEMAERGISPTMVTYNT 256
+ A + + R ++ + ++ + +G C T A ++ LK + P + TY +
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
++ GY + +L A F MK++ +V TYTT+++G AG ++ + + M G
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 317 LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
+P++ TYNA I LCKK A + + G + TY ++I+ C D+ +A+
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLIS 436
+ RM K G ++ N++I FC ++++ +F+ + S +P +TY +IS
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVV--SLGLIPTKETYTSMIS 541
Query: 437 AMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
K D+ +A K M G +P FT+ +++GL
Sbjct: 542 CYC---KEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 6/263 (2%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A V EM+ RG+ P +Y ++ G FR +++EA + M +R D T T ++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G V ++ F +M+ G P++ + +LI LCKK ++ A + EEMV G P
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 355 NLNTYNVVIRGLCHSGDMERAVE-YMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
N+ T+ +I GLC G E+A ++ + +P+V TY +I +C ++ + +
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
F +M + PN++TY LI+ K+ A +L+ M D GF+P +T+N +
Sbjct: 381 FSRMKEQGL--FPNVNTYTTLING---HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 474 NGLALTGNQEFAKEILRMQSRCG 496
+ L A E+L CG
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCG 458
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 9/324 (2%)
Query: 143 RGPTPRAFAI--LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
+G TP + + + E G A VF M G D +S+ ++ + +++
Sbjct: 176 QGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQE 235
Query: 201 AHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A R F D+ + +I C A+ ++M + G P ++ + +L+
Sbjct: 236 ADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 295
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV- 318
G + +++A+E EM + + +V T+T ++ G G +K+ R+F ++VR+
Sbjct: 296 GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 355
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P+V TY ++I CK+D + A ++F M +G PN+NTY +I G C +G RA E
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
M M G P++ TYN I C + + K SC + TY +LI
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA--FSCGLEADGVTYTILIQE- 472
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGF 462
+ K D+ A M GF
Sbjct: 473 --QCKQNDINQALAFFCRMNKTGF 494
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 141/349 (40%), Gaps = 12/349 (3%)
Query: 76 WTPE------LVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYT 129
W P L+D + KR W KA + F L R TY + + I +
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTE--KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375
Query: 130 TAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTIL 189
A L SRM+ P + L + AG RA + M + G ++ ++N +
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 190 DVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS 248
D LCK R A+ L K F D V+Y I+ C AL M + G
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 495
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
M N L+ + R +++E+ F + TYT+M+ + G++ + +
Sbjct: 496 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKY 555
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
F M R G VP TY +LI LCKK V A ++E M+ +G P T + C
Sbjct: 556 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
D A+ + ++K + ++T ++R C ++ F+K+
Sbjct: 616 RNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKL 661
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 151/345 (43%), Gaps = 15/345 (4%)
Query: 84 VLKRLWNHG--PKALQFFK---HLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM 138
+L L +G +A+ +F+ L P I+ F ID + A+ ++ M
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLIN----FTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 139 RSLRRGPTPRAFA--ILAERYAAAGKPHRAVRVFISM-HEHGCRQDLNSFNTILDVLCKT 195
+R G P + L + G +A R+F+ + + +++++ +++ CK
Sbjct: 314 --VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKE 371
Query: 196 KRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
++ A LF + + +V +Y + NG C A +++ M + G P + TY
Sbjct: 372 DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTY 431
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
N + + + EA+E + E D VTYT ++ ++ ++ F M +
Sbjct: 432 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 491
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
G + N LI C++ ++ + +F+ +V G +P TY +I C GD++
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
A++Y M++HG P TY +I C +++ ++E M D
Sbjct: 552 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 596
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 175/402 (43%), Gaps = 50/402 (12%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
GP+ +F + Y G A F ++ + G + S N +++ LC + A
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278
Query: 204 LFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL---- 258
L + DSV+YNI+A G+ L+ A +V+++M ++G+SP ++TY LL
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338
Query: 259 --------------------------------KGYFRCHQLREAWEFFLEMKKRKCEIDV 286
G + ++ EA F +MK D+
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
V Y+ ++HG G+ + ++DEM ++P+ T+ AL+ LC+K + A + +
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC---D 403
++ G ++ YN+VI G SG +E A+E + + GI PSV T+N +I +C +
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518
Query: 404 AGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
E K L + + G P++ +Y L+ A ++ + +L EM G
Sbjct: 519 IAEARKILDVIKLYGLA-----PSVVSYTTLMDAYANCGNTKSI---DELRREMKAEGIP 570
Query: 464 PRKFTFNRVLNGLALTGNQEFAKEILRMQ--SRCGHALRHLK 503
P T++ + GL E +LR + +C LR ++
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 167/361 (46%), Gaps = 22/361 (6%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A +L ++M++ P A++I+ GK A+ ++ M + + + +L
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LC+ + A SL + D V YNI+ +G+ AL++ K + E GI+P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++ T+N+L+ GY + + EA + +K VV+YTT++ + G K +
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 310 DEMVRAGLVPSVATYNALIQVLCK----KDCVQNALL---VFE-------EMVGKGCVPN 355
EM G+ P+ TY+ + + LC+ ++C N +L +FE +M +G P+
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENC--NHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
TYN +I+ LC + A ++ M+ + S TYN++I C G I K S
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+ + + S L Y LI A V+ E +A KL +++ RGF ++ V+N
Sbjct: 680 SLQEQNVS-LSKF-AYTTLIKAHCVKGDPE---MAVKLFHQLLHRGFNVSIRDYSAVINR 734
Query: 476 L 476
L
Sbjct: 735 L 735
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 41/315 (13%)
Query: 218 SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY-----------FRCHQ 266
+Y+ + +G C ++ A+ L+ + I P++V++N+++ GY F C
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 267 LR------------------------EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
L+ EA E +M K E D VTY + GF + G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN-LNTYNV 361
+ V +M+ GL P V TY L+ C+ + L++ ++M+ +G N + +V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
++ GLC +G ++ A+ +M+ G+ P + Y++VI C G+ + L ++++M D
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK- 427
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
LPN T+ L+ + + L+ A LL ++ G +N V++G A +G
Sbjct: 428 -RILPNSRTHGALLLGLCQKGM---LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 482 QEFAKEILRMQSRCG 496
E A E+ ++ G
Sbjct: 484 IEEALELFKVVIETG 498
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 136/322 (42%), Gaps = 15/322 (4%)
Query: 111 SPSGFEHAIDIAA--RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
SP ++I I ++ + A L M R P R L G A
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWC 227
+ S+ G D+ +N ++D K+ +E A LFK SV ++N + G+C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
+ A ++L + G++P++V+Y TL+ Y C + E EMK V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 288 TYTTMVHGF--GVAGE----------VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
TY+ + G G E +K K+ +M G+ P TYN +IQ LC+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
+ A + E M + + TYN++I LC G + +A ++ +++ + S Y
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 396 VVIRYFCDAGEIEKGLSMFEKM 417
+I+ C G+ E + +F ++
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQL 716
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 126/247 (51%), Gaps = 13/247 (5%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
+L +LK+M ++ ++ + +YN++L +FR + + W+ + E+K + TY+T+V
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLY-HFR--ETDKMWDVYKEIKDKNEH----TYSTVVD 195
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G +++ + + PSV ++N+++ CK V A F ++ G VP
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
++ ++N++I GLC G + A+E M KHG+ P TYN++ + F G I +
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF-LPRKFTFNRVL 473
M D S P++ TY +L+ + + ++ + LL +M+ RGF L + +L
Sbjct: 316 RDMLDKGLS--PDVITYTILLCG---QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 474 NGLALTG 480
+GL TG
Sbjct: 371 SGLCKTG 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 105/266 (39%), Gaps = 48/266 (18%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ I+ + YA +G A+ +F + E G + +FN+++ CKT+ + A + +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 210 ----------------GRFRCDS--------------------VSYNIIANGWC------ 227
C + V+Y++I G C
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 228 -----LIKRT-PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
L +R Q L++M GI P +TYNT+++ R L A+ F MK R
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
+ TY ++ V G ++K+ + + S Y LI+ C K + A+
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLC 367
+F +++ +G ++ Y+ VI LC
Sbjct: 711 KLFHQLLHRGFNVSIRDYSAVINRLC 736
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE---- 199
P+ ++ L + YA G + M G +++ I LC+ + E
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 200 -MAHSLFKTFRGRFRC--------DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
+ +F+ + R D ++YN I C +K A L+ M R + +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
TYN L+ +R+A F ++++ + YTT++ V G+ + + ++F
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 311 EMVRAGLVPSVATYNALIQVLCKK 334
+++ G S+ Y+A+I LC++
Sbjct: 715 QLLHRGFNVSIRDYSAVINRLCRR 738
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 175/402 (43%), Gaps = 50/402 (12%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
GP+ +F + Y G A F ++ + G + S N +++ LC + A
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278
Query: 204 LFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL---- 258
L + DSV+YNI+A G+ L+ A +V+++M ++G+SP ++TY LL
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338
Query: 259 --------------------------------KGYFRCHQLREAWEFFLEMKKRKCEIDV 286
G + ++ EA F +MK D+
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
V Y+ ++HG G+ + ++DEM ++P+ T+ AL+ LC+K + A + +
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC---D 403
++ G ++ YN+VI G SG +E A+E + + GI PSV T+N +I +C +
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518
Query: 404 AGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
E K L + + G P++ +Y L+ A ++ + +L EM G
Sbjct: 519 IAEARKILDVIKLYG-----LAPSVVSYTTLMDAYANCGNTKSI---DELRREMKAEGIP 570
Query: 464 PRKFTFNRVLNGLALTGNQEFAKEILRMQ--SRCGHALRHLK 503
P T++ + GL E +LR + +C LR ++
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 167/361 (46%), Gaps = 22/361 (6%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A +L ++M++ P A++I+ GK A+ ++ M + + + +L
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
LC+ + A SL + D V YNI+ +G+ AL++ K + E GI+P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
++ T+N+L+ GY + + EA + +K VV+YTT++ + G K +
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 310 DEMVRAGLVPSVATYNALIQVLCK----KDCVQNALL---VFE-------EMVGKGCVPN 355
EM G+ P+ TY+ + + LC+ ++C N +L +FE +M +G P+
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENC--NHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
TYN +I+ LC + A ++ M+ + S TYN++I C G I K S
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+ + + S L Y LI A V+ E +A KL +++ RGF ++ V+N
Sbjct: 680 SLQEQNVS-LSKF-AYTTLIKAHCVKGDPE---MAVKLFHQLLHRGFNVSIRDYSAVINR 734
Query: 476 L 476
L
Sbjct: 735 L 735
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 41/315 (13%)
Query: 218 SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY-----------FRCHQ 266
+Y+ + +G C ++ A+ L+ + I P++V++N+++ GY F C
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 267 LR------------------------EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
L+ EA E +M K E D VTY + GF + G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN-LNTYNV 361
+ V +M+ GL P V TY L+ C+ + L++ ++M+ +G N + +V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
++ GLC +G ++ A+ +M+ G+ P + Y++VI C G+ + L ++++M D
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK- 427
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
LPN T+ L+ + + L+ A LL ++ G +N V++G A +G
Sbjct: 428 -RILPNSRTHGALLLGLCQKGM---LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 482 QEFAKEILRMQSRCG 496
E A E+ ++ G
Sbjct: 484 IEEALELFKVVIETG 498
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 136/322 (42%), Gaps = 15/322 (4%)
Query: 111 SPSGFEHAIDIAA--RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVR 168
SP ++I I ++ + A L M R P R L G A
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 169 VFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWC 227
+ S+ G D+ +N ++D K+ +E A LFK SV ++N + G+C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 228 LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVV 287
+ A ++L + G++P++V+Y TL+ Y C + E EMK V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 288 TYTTMVHGF--GVAGE----------VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
TY+ + G G E +K K+ +M G+ P TYN +IQ LC+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
+ A + E M + + TYN++I LC G + +A ++ +++ + S Y
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 396 VVIRYFCDAGEIEKGLSMFEKM 417
+I+ C G+ E + +F ++
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQL 716
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 126/247 (51%), Gaps = 13/247 (5%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
+L +LK+M ++ ++ + +YN++L +FR + + W+ + E+K + TY+T+V
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLY-HFR--ETDKMWDVYKEIKDKNEH----TYSTVVD 195
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G +++ + + PSV ++N+++ CK V A F ++ G VP
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
++ ++N++I GLC G + A+E M KHG+ P TYN++ + F G I +
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF-LPRKFTFNRVL 473
M D S P++ TY +L+ + + ++ + LL +M+ RGF L + +L
Sbjct: 316 RDMLDKGLS--PDVITYTILLCG---QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 474 NGLALTG 480
+GL TG
Sbjct: 371 SGLCKTG 377
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 105/266 (39%), Gaps = 48/266 (18%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ I+ + YA +G A+ +F + E G + +FN+++ CKT+ + A + +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 210 ----------------GRFRCDS--------------------VSYNIIANGWC------ 227
C + V+Y++I G C
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 228 -----LIKRT-PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
L +R Q L++M GI P +TYNT+++ R L A+ F MK R
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
+ TY ++ V G ++K+ + + S Y LI+ C K + A+
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLC 367
+F +++ +G ++ Y+ VI LC
Sbjct: 711 KLFHQLLHRGFNVSIRDYSAVINRLC 736
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE---- 199
P+ ++ L + YA G + M G +++ I LC+ + E
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 200 -MAHSLFKTFRGRFRC--------DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
+ +F+ + R D ++YN I C +K A L+ M R + +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
TYN L+ +R+A F ++++ + YTT++ V G+ + + ++F
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 311 EMVRAGLVPSVATYNALIQVLCKK 334
+++ G S+ Y+A+I LC++
Sbjct: 715 QLLHRGFNVSIRDYSAVINRLCRR 738
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 155/333 (46%), Gaps = 10/333 (3%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
WN + L++ ++ + S F I ++ ++ A ++S + + P
Sbjct: 126 WNLVSEILEWLRY---QNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVI 182
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
++ L E Y GK + A +F M G ++ IL + + + A +F+T
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 209 ----RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ + D Y+++ + A +V M +G+ + VTYN+L+ F
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FET 300
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+E + + +M++ + DVV+Y ++ +G A +++ VF+EM+ AG+ P+ Y
Sbjct: 301 S-YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
N L+ V+ A VF+ M P+L +Y ++ ++ DME A ++ R++
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
G P++ TY +I+ + A ++EK + ++EKM
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + + ++ Y AG +A +VF SM G Q ++N+++ K V +
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQ 311
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ R + D VSY ++ + +R AL V +EM + G+ PT YN LL +
Sbjct: 312 MQ--RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 369
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+ +A F M++ + D+ +YTTM+ + A +++ +++ F + G P++ TY
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
LI+ K + V+ + V+E+M G N ++ + A+ + ME
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 489
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKG 410
G+ P + NV++ E+E+
Sbjct: 490 CGVPPDQKAKNVLLSLASTQDELEEA 515
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 17/262 (6%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A +VL +++ G +P +++Y L++ Y R + A F M+ E +TY ++
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 295 GFGVAGEVKKSKRVFDEMV---RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
F + K+++ VF+ ++ ++ L P Y+ +I + K + A VF MVGKG
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
+ TYN ++ ++ + + +M++ I+P V +Y ++I+ + A E+ L
Sbjct: 285 VPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEAL 341
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG-FLPRKFTFN 470
S+FE+M D P YN+L+ A + +V K + + + R P +++
Sbjct: 342 SVFEEMLDAGVR--PTHKAYNILLDAFAI----SGMVEQAKTVFKSMRRDRIFPDLWSYT 395
Query: 471 RVL----NGLALTGNQEFAKEI 488
+L N + G ++F K I
Sbjct: 396 TMLSAYVNASDMEGAEKFFKRI 417
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
+V++YT ++ +G G+ ++ +F M +G PS TY +++ + D + A VF
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 345 EEMVGKG---CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
E ++ + P+ Y+++I +G+ E+A + M G+ S TYN ++ +
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 299
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
E+ K ++++M P++ +Y +LI A ++ E+ A + EM+D G
Sbjct: 300 TSYKEVSK---IYDQMQRSDIQ--PDVVSYALLIKAYGRARREEE---ALSVFEEMLDAG 351
Query: 462 FLPRKFTFNRVLNGLALTGNQEFAKEILRMQSR 494
P +N +L+ A++G E AK + + R
Sbjct: 352 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 163/356 (45%), Gaps = 11/356 (3%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
+ D A+ ++ M L PT ++ + G+ A F M E G + D
Sbjct: 559 KKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEI 618
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRF-RCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
++ +++ + R++ A+ L + F R S +Y ++ +G+ + Q L +M
Sbjct: 619 AYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKM 678
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
E G+SP +V Y L+ + + + ++ F M + + D + Y T++ G A
Sbjct: 679 LEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMAR 738
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM--VGKGCVPNLNTYN 360
KK ++V E + L+ + L+ + + E + V K +PNL +N
Sbjct: 739 KKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHN 798
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
+I G C +G ++ A ++ M+K GI P++ TY ++++ +AG+IE + +FE
Sbjct: 799 TIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE----- 853
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+C P+ Y+ L+ + K+ D A L++EM G P K ++ ++L L
Sbjct: 854 GTNCEPDQVMYSTLLKGLCDFKRPLD---ALALMLEMQKSGINPNKDSYEKLLQCL 906
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 147/336 (43%), Gaps = 46/336 (13%)
Query: 168 RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWC 227
R+F + HG LN +LD LC R+ + +L+K+ +C
Sbjct: 206 RLFKGLCGHG---HLNEAIGMLDTLCGMTRMPLPVNLYKSLF----------------YC 246
Query: 228 LIKR--TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
KR A + M G V Y L+K Y + + + A +L M +R E+D
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
+ T++HGF G + K + +F +M++ G+ +V TY+ +I CK+ V AL +F
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 346 EMVGKGCVP-NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
G + N++ Y +I G G M++AV+ + RM +GI P TY V+++
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKC 426
Query: 405 GEIEKGLSMFEKMGDGSCSCLP----NLDTYNVLISAMF--VRKKSEDLVVAGKLLI--- 455
E++ + + + + D C P +L V + ++ + +K +L G ++
Sbjct: 427 HELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTA 486
Query: 456 ---------------EMVDRGFLPRKFTFNRVLNGL 476
+MV+ G P F++N V+ L
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 153/398 (38%), Gaps = 56/398 (14%)
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
+ T A L RM P F L + G + +F M + G + ++ +++
Sbjct: 287 NMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYH 346
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNI-----IANGWCLIKRTPMALQVLKE 241
++ CK V+ A LF G + +S N+ + G+ A+ +L
Sbjct: 347 IMIGSYCKEGNVDYALRLFVNNTGS---EDISRNVHCYTNLIFGFYKKGGMDKAVDLLMR 403
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M + GI P +TY LLK +CH+L+ A + C I+ + G
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL-------GN 456
Query: 302 VK-KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC-------- 352
++ K + + E+ R + + LC + AL E+MV GC
Sbjct: 457 IEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYN 516
Query: 353 ---------------------------VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
VP+++TY +V+ LC D + A + ME+
Sbjct: 517 SVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEEL 576
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
G+RP+V Y+ +I G + + F KM + P+ Y ++I+ + R
Sbjct: 577 GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ--PDEIAYMIMINT-YARNGRI 633
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
D A +L+ E+V P FT+ +++G G E
Sbjct: 634 D--EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMME 669
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 132/318 (41%), Gaps = 46/318 (14%)
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMA 235
GC S+N+++ L + +E SL + F D +Y I+ N C A
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
++ M E G+ PT V Y++++
Sbjct: 567 FAIIDAMEELGLRPT-----------------------------------VAIYSSIIGS 591
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
G G V +++ F +M+ +G+ P Y +I + + A + EE+V P+
Sbjct: 592 LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPS 651
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
TY V+I G G ME+ +Y+ +M + G+ P+V Y +I +F G+ + ++F
Sbjct: 652 SFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFG 711
Query: 416 KMGDGSCSCLPNLDTYNVLIS----AMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
MG+ + Y L+S AM +KK + +V GK +++ R L R
Sbjct: 712 LMGENDIK--HDHIAYITLLSGLWRAMARKKKRQVIVEPGKE--KLLQR--LIRTKPLVS 765
Query: 472 VLNGLALTGNQEFAKEIL 489
+ + L G++ FA E++
Sbjct: 766 IPSSLGNYGSKSFAMEVI 783
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A++V+ ++ ++ I P + +NT++ GY +L EA+ M+K ++VTYT ++
Sbjct: 779 AMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
AG+++ + +F+ P Y+ L++ LC +AL + EM G P
Sbjct: 838 SHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N ++Y +++ LC+S AV+ + M I P + +I C+ ++ + ++F
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 415 EKM 417
M
Sbjct: 955 AIM 957
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 155/333 (46%), Gaps = 10/333 (3%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
WN + L++ ++ + S F I ++ ++ A ++S + + P
Sbjct: 119 WNLVSEILEWLRY---QNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVI 175
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
++ L E Y GK + A +F M G ++ IL + + + A +F+T
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 209 ----RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ + D Y+++ + A +V M +G+ + VTYN+L+ F
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FET 293
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+E + + +M++ + DVV+Y ++ +G A +++ VF+EM+ AG+ P+ Y
Sbjct: 294 S-YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
N L+ V+ A VF+ M P+L +Y ++ ++ DME A ++ R++
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
G P++ TY +I+ + A ++EK + ++EKM
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + + ++ Y AG +A +VF SM G Q ++N+++ K V +
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQ 304
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
+ R + D VSY ++ + +R AL V +EM + G+ PT YN LL +
Sbjct: 305 MQ--RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 362
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+ +A F M++ + D+ +YTTM+ + A +++ +++ F + G P++ TY
Sbjct: 363 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
LI+ K + V+ + V+E+M G N ++ + A+ + ME
Sbjct: 423 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 482
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKG 410
G+ P + NV++ E+E+
Sbjct: 483 CGVPPDQKAKNVLLSLASTQDELEEA 508
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 17/262 (6%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A +VL +++ G +P +++Y L++ Y R + A F M+ E +TY ++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 295 GFGVAGEVKKSKRVFDEMV---RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
F + K+++ VF+ ++ ++ L P Y+ +I + K + A VF MVGKG
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
+ TYN ++ ++ + + +M++ I+P V +Y ++I+ + A E+ L
Sbjct: 278 VPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEAL 334
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG-FLPRKFTFN 470
S+FE+M D P YN+L+ A + +V K + + + R P +++
Sbjct: 335 SVFEEMLDAGVR--PTHKAYNILLDAFAI----SGMVEQAKTVFKSMRRDRIFPDLWSYT 388
Query: 471 RVL----NGLALTGNQEFAKEI 488
+L N + G ++F K I
Sbjct: 389 TMLSAYVNASDMEGAEKFFKRI 410
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 11/241 (4%)
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
L+ Y + A + K +V++YT ++ +G G+ ++ +F M +G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 317 LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG---CVPNLNTYNVVIRGLCHSGDME 373
PS TY +++ + D + A VFE ++ + P+ Y+++I +G+ E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNV 433
+A + M G+ S TYN ++ + E+ K ++++M P++ +Y +
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQ--RSDIQPDVVSYAL 319
Query: 434 LISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQS 493
LI A ++ E+ A + EM+D G P +N +L+ A++G E AK + +
Sbjct: 320 LIKAYGRARREEE---ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 494 R 494
R
Sbjct: 377 R 377
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 46/362 (12%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNT 187
+ AW L+ M ++ + T +A ++ +RYAAA +A+R F M + +F
Sbjct: 171 FNIAWCLIRDMFNVSK-DTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQG 229
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLI-KRTPMALQVLKEMAERG 246
+L LC+ +E A + F D +N+I NGWC I A ++ +EM
Sbjct: 230 LLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYC 289
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
I+P +Y+ ++ + + L ++ + EMKKR
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKR-------------------------- 323
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
GL P + YN+L+ VL ++DC A+ + +++ +G P+ TYN +IR L
Sbjct: 324 ---------GLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPL 374
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C +G ++ A + M + P+V T++ F +A EK L + +M P
Sbjct: 375 CEAGKLDVARNVLATMISENLSPTVDTFHA----FLEAVNFEKTLEVLGQMKISDLG--P 428
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
+T+ +++ +F K+ E+ A K+ EM + + + GL G E A+
Sbjct: 429 TEETFLLILGKLFKGKQPEN---ALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAR 485
Query: 487 EI 488
EI
Sbjct: 486 EI 487
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE--MVG 349
M+ + A + ++ R FD M + P + L+ LC+ ++ A EE +
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKA----EEFMLAS 250
Query: 350 KGCVP-NLNTYNVVIRGLCH-SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
K P ++ +NV++ G C+ D+ A M + I P+ +Y+ +I F G +
Sbjct: 251 KKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
L ++++M + P ++ YN L+ +V + + A KL+ ++ + G P
Sbjct: 311 FDSLRLYDEMKKRGLA--PGIEVYNSLV---YVLTREDCFDEAMKLMKKLNEEGLKPDSV 365
Query: 468 TFNRVLNGLALTGNQEFAKEIL 489
T+N ++ L G + A+ +L
Sbjct: 366 TYNSMIRPLCEAGKLDVARNVL 387
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 170/393 (43%), Gaps = 45/393 (11%)
Query: 112 PSGFEHAIDIAA--RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
P H I ++A R Y+ A + M+ + P F I+ + G+ +A+ +
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 173
Query: 170 FISMHEH--GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGW 226
F SM E CR D+ +F +I+ + +E ++F+ + + VSYN + +
Sbjct: 174 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 233
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
+ + AL VL ++ + GI P +V+Y LL Y R Q +A E FL M+K + + +V
Sbjct: 234 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 293
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV------------------------- 321
VTY ++ +G G + ++ +F +M + G+ P+V
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 353
Query: 322 ----------ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
A YN+ I ++ A+ +++ M K + T+ ++I G C
Sbjct: 354 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
A+ Y+ ME I + + Y+ V+ + G++ + S+F +M C P++ Y
Sbjct: 414 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE--PDVIAY 471
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
++ A SE A +L +EM G P
Sbjct: 472 TSMLHAY---NASEKWGKACELFLEMEANGIEP 501
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 3/236 (1%)
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
YN +++ + R + + +A F EM+K C+ D TY +++ G AG+ + + + D+M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
RA + PS +TYN LI + AL V ++M G P+L T+N+V+
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNV 433
+A+ Y M+ +RP T+N++I G+ + L +F M + C P++ T+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 434 LISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
++ V+ + E+ + MV G P ++N ++ A+ G A +L
Sbjct: 194 IMHLYSVKGEIENCRA---VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 151/335 (45%), Gaps = 40/335 (11%)
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
MR RR P + L + Y + G AV +F M + G + ++ S T+L ++K+
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 198 -----------------------------------VEMAHSLFKTFRGR-FRCDSVSYNI 221
+E A +L+++ R + + DSV++ I
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
+ +G C + + P A+ LKEM + I T Y+++L Y + Q+ EA F +MK
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
CE DV+ YT+M+H + + + K+ +F EM G+ P +AL++ K N
Sbjct: 464 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 523
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLCHS-GDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
++ + M K +P I C++ + +RA++ + M+ + S+ N ++
Sbjct: 524 VLMDLMREKE-IPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHL 582
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
F +G++E + +F K+ NL TY +L+
Sbjct: 583 FGKSGKVEAMMKLFYKIIASGVGI--NLKTYAILL 615
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 126/298 (42%), Gaps = 44/298 (14%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMAL 236
R D+ +N ++ + + V+ A LF + ++ C D+ +Y+ + N + A+
Sbjct: 10 RNDI--YNMMIRLHARHNWVDQARGLFFEMQ-KWSCKPDAETYDALINAHGRAGQWRWAM 66
Query: 237 QVLKEMAERGISPTMVTYNTL-----------------------------------LKGY 261
++ +M I+P+ TYN L L Y
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM--VRAGLVP 319
Q +A +F MK K D T+ +++ G+ ++ +F+ M RA P
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
V T+ +++ + K ++N VFE MV +G PN+ +YN ++ G A+ +
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISA 437
G ++++GI P V +Y ++ + + + K +F M PN+ TYN LI A
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK--PNVVTYNALIDA 302
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 170/393 (43%), Gaps = 45/393 (11%)
Query: 112 PSGFEHAIDIAA--RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRV 169
P H I ++A R Y+ A + M+ + P F I+ + G+ +A+ +
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 170 FISMHEH--GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGW 226
F SM E CR D+ +F +I+ + +E ++F+ + + VSYN + +
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
+ + AL VL ++ + GI P +V+Y LL Y R Q +A E FL M+K + + +V
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV------------------------- 321
VTY ++ +G G + ++ +F +M + G+ P+V
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 322 ----------ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
A YN+ I ++ A+ +++ M K + T+ ++I G C
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
A+ Y+ ME I + + Y+ V+ + G++ + S+F +M C P++ Y
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE--PDVIAY 603
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
++ A SE A +L +EM G P
Sbjct: 604 TSMLHAY---NASEKWGKACELFLEMEANGIEP 633
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 10/309 (3%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNI--IANGWCLIKRTPMALQVLKE 241
S + ++D L R E + ++ GRF + I ++ C+ + + V K
Sbjct: 77 SVSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCI----ELCVNVFKW 132
Query: 242 MA-ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
M ++ YN +++ + R + + +A F EM+K C+ D TY +++ G AG
Sbjct: 133 MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 192
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+ + + + D+M+RA + PS +TYN LI + AL V ++M G P+L T+N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
+V+ +A+ Y M+ +RP T+N++I G+ + L +F M +
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
C P++ T+ ++ V+ + E+ + MV G P ++N ++ A+ G
Sbjct: 313 RAECRPDVVTFTSIMHLYSVKGEIENCRA---VFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 481 NQEFAKEIL 489
A +L
Sbjct: 370 MSGTALSVL 378
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 151/335 (45%), Gaps = 40/335 (11%)
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
MR RR P + L + Y + G AV +F M + G + ++ S T+L ++K+
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 198 -----------------------------------VEMAHSLFKTFRGR-FRCDSVSYNI 221
+E A +L+++ R + + DSV++ I
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
+ +G C + + P A+ LKEM + I T Y+++L Y + Q+ EA F +MK
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
CE DV+ YT+M+H + + + K+ +F EM G+ P +AL++ K N
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 655
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLCHS-GDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
++ + M K +P I C++ + +RA++ + M+ + S+ N ++
Sbjct: 656 VLMDLMREKE-IPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHL 714
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
F +G++E + +F K+ NL TY +L+
Sbjct: 715 FGKSGKVEAMMKLFYKIIASGVGI--NLKTYAILL 747
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 158/362 (43%), Gaps = 47/362 (12%)
Query: 117 HAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEH 176
+A + M D A + +M+ L PT + L + Y AGKP R+ + M E
Sbjct: 123 NAFSESGNMEDAVQA---LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 177 G---CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIAN-------- 224
G ++ +FN ++ CK K+VE A + K R D+V+YN IA
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 225 -----------------------------GWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
G+C R L+ ++ M E + +V +N
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
+L+ G+ E MK+ + DV+TY+T+++ + AG ++K+ +VF EMV+A
Sbjct: 300 SLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA 359
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
G+ P Y+ L + + + A + E ++ + PN+ + VI G C +G M+ A
Sbjct: 360 GVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDA 418
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
+ +M K G+ P+++T+ ++ + + + K + + M C P T+ +L
Sbjct: 419 MRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM--RGCGVKPENSTFLLLA 476
Query: 436 SA 437
A
Sbjct: 477 EA 478
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 155/353 (43%), Gaps = 54/353 (15%)
Query: 152 ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RG 210
+L ER G+PH A VF ++ E G R L S+ T+L + K+ S+ +
Sbjct: 54 VLIER----GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 211 RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA 270
+ DS+ +N + N + A+Q L +M E G++PT TYNTL+KGY
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY--------- 160
Query: 271 WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV---PSVATYNAL 327
G+AG+ ++S + D M+ G V P++ T+N L
Sbjct: 161 --------------------------GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA----VEYMGRME 383
+Q CKK V+ A V ++M G P+ TYN + G+ RA VE M E
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
K +P+ +T +V+ +C G + GL +M + NL +N LI+ FV
Sbjct: 255 KA--KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA--NLVVFNSLING-FVEVM 309
Query: 444 SEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
D + ++L M + T++ V+N + G E A ++ + + G
Sbjct: 310 DRDGI--DEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 78/163 (47%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
++ + +++AG +A +VF M + G + D ++++ + + K + A L +T
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Query: 210 GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLRE 269
R + V + + +GWC A++V +M + G+SP + T+ TL+ GY Q +
Sbjct: 393 VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 452
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
A E M+ + + T+ + + VAG +S + + +
Sbjct: 453 AEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 495
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 2/259 (0%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC-- 214
Y +G A ++F M E C + + SFN +L +K+++ A FK +
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D V+YN + C L + +E+ + G P ++++NTLL+ ++R E +
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
MK + ++ +Y + V G + + + D M G+ P V TYNALI
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
+ ++ + + EM KG P+ TY ++I LC GD++RAVE KH + Y
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Query: 395 NVVIRYFCDAGEIEKGLSM 413
V+ AG+I++ +
Sbjct: 372 KPVVERLMGAGKIDEATQL 390
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM-KKRKCEIDVVTYTTMV 293
A ++ EM E T+ ++N LL Y +L EA + F E+ +K D+VTY TM+
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G + +F+E+ + G P + ++N L++ +++ +++ M K
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
PN+ +YN +RGL + A+ + M+ GI P V TYN +I + +E+ +
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
+ +M + + P+ TY +LI + K DL A ++ E + L R + V+
Sbjct: 321 YNEMKEKGLT--PDTVTYCMLIPLLC---KKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 474 NGLALTGNQEFAKEILR 490
L G + A ++++
Sbjct: 376 ERLMGAGKIDEATQLVK 392
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 162/359 (45%), Gaps = 4/359 (1%)
Query: 62 PGTLAEALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDI 121
P ++E N R TP +V EVLK L N A +FF + Y H + +
Sbjct: 111 PSVVSEL--NKLRRVTPSIVAEVLK-LGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYC 167
Query: 122 AARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQD 181
R + A L M S R P+ + F IL +A + R V+ M + G +
Sbjct: 168 LNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPR 227
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIKRTPMALQVLK 240
+ +N I+D L K ++A ++++ F+ +S ++ I+ G C R L++L+
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
M E P + Y ++K L + + EM++ + + DV+ Y T+V G G
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
V++ +F EM ++ Y LI+ V++A ++E++V G + ++ YN
Sbjct: 348 RVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
VI+GLC +++A + + + P +T + ++ + + ++ E++G+
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 140/301 (46%), Gaps = 8/301 (2%)
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
++ RMR P A+ + + + G ++RV+ M + D+ ++ T++ LC
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 194 KTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
K RVE + LF +G+ D Y ++ G+ + A + +++ + G +
Sbjct: 345 KDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIG 404
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
YN ++KG +Q+ +A++ F + + E D T + ++ + V + V + +
Sbjct: 405 IYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERI 464
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQN--ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
G P ++LC D +N AL VF + KG +++ YN+++ L G
Sbjct: 465 GELGY-PVSDYLTQFFKLLC-ADEEKNAMALDVFYILKTKGH-GSVSVYNILMEALYKMG 521
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
D+++++ M K G P +Y++ I F + G+++ S EK+ + SC+P++
Sbjct: 522 DIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE--MSCVPSIAA 579
Query: 431 Y 431
Y
Sbjct: 580 Y 580
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 9/267 (3%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPM--ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLRE 269
++ D +YN A +CL + A Q+ + M +G P+ + L++ + +
Sbjct: 154 YKHDFAAYNAFA--YCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
+ + +MKK + V Y ++ G + V+++ GLV T+ L++
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
LCK ++ L + + M C P++ Y +I+ L G+++ ++ M + I+P
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 390 SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
V Y ++ C G +E+G +F +M L + + Y VLI K
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI--LIDREIYRVLIEGFVADGKVRS--- 386
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGL 476
A L ++VD G++ +N V+ GL
Sbjct: 387 ACNLWEDLVDSGYIADIGIYNAVIKGL 413
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 152/354 (42%), Gaps = 35/354 (9%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-TF 208
+ +L E + A GK A ++ + + G D+ +N ++ LC +V+ A+ LF+
Sbjct: 371 YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG--ISPTMVTYNTLLKGYFRCHQ 266
D + + I + ++ R VL+ + E G +S + + LL +
Sbjct: 431 EEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNA 490
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+ A + F +K K V Y ++ G+++KS +F EM + G P ++Y+
Sbjct: 491 M--ALDVFYILKT-KGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSI 547
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV----EYMGRM 382
I +K V+ A E+++ CVP++ Y + +GLC G+++ + E +G +
Sbjct: 548 AICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNV 607
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS--------CSCLPNLDTYNVL 434
E P Y + + + C EK + + ++M C+ + + + +
Sbjct: 608 ESG---PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTI 664
Query: 435 ISA--MFVRKKSE------DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
A +F K D+VV ++LIE +K T + VL+G+ G
Sbjct: 665 KVAREVFTELKKRKVMTEADMVVYEEMLIEQT------KKKTADLVLSGIKFFG 712
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 87/212 (41%), Gaps = 5/212 (2%)
Query: 278 KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCV 337
K++ + D Y + G + + ++ + M G PS + LI++
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 338 QNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVV 397
V+E+M G P + YN ++ L +G + A+ ++ G+ T+ ++
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 398 IRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEM 457
++ C AG IE+ L + ++M + C P++ Y +I + +L + ++ EM
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCK--PDVFAYTAMIKTLV---SEGNLDASLRVWDEM 324
Query: 458 VDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
P + ++ GL G E E+
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELF 356
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 175/401 (43%), Gaps = 22/401 (5%)
Query: 73 PFRWTPELVDEVLKRLWNHGPKALQFFK----HLDRHPT---------YIHSPSGFEHAI 119
P PE + VL R + +A+ FFK L + P + S F A+
Sbjct: 75 PHLGYPE-ISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAM 133
Query: 120 DIAARMRDYTTAWTLVSRMRSLRRGPT-----PRAFAILAERYAAAGKPHRAVRVFISMH 174
+ + T+ V R L P F +L + Y G RVF +
Sbjct: 134 QFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVL 193
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTP 233
+ G + + N +L+ L K +E ++ R ++ ++NI+ N +C
Sbjct: 194 DSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFR 253
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
L++M E G P +VTYNTL+ Y R +L+EA+ + M +R+ D+VTYT+++
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G G V+++ + F MV G+ P +YN LI CK+ +Q + + EM+G V
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P+ T V++ G G + AV ++ + + + + + +I C G+ +
Sbjct: 374 PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHL 433
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMF-VRKKSEDLVVAGKL 453
+++ + +TYN LI ++ E LV+ GKL
Sbjct: 434 LDRIIEEE-GHEAKPETYNNLIESLSRCDAIEEALVLKGKL 473
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 128/324 (39%), Gaps = 40/324 (12%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
W + S M + P F IL + M E G DL ++NT++
Sbjct: 220 CWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS 279
Query: 191 VLCKTKRVEMAHSLFKT-FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
C+ R++ A L+K +R R D V+Y + G C R A Q M +RGI P
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 250 TMVTYNTLL-----------------------------------KGYFRCHQLREAWEFF 274
++YNTL+ +G+ R +L A F
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA-GLVPSVATYNALIQVLCK 333
+E+++ K +I ++ G+ +K + D ++ G TYN LI+ L +
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR 459
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
D ++ AL++ ++ + V + TY +I LC G A M M ++P
Sbjct: 460 CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 394 YNVVIRYFC---DAGEIEKGLSMF 414
++ +C D + E+ LS+F
Sbjct: 520 CGALVYGYCKELDFDKAERLLSLF 543
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 23/269 (8%)
Query: 230 KRTPMALQVLKEMAERG------------ISPT------MVTYNTLLKGYFRCHQLREAW 271
K+ P+A+Q L E+ E +S T V ++ L+KGY + + E +
Sbjct: 127 KKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGF 186
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F E+ + VVT +++G ++ +V+ M R G+ P+ T+N L V
Sbjct: 187 RVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVF 246
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
C + E+M +G P+L TYN ++ C G ++ A M + + P +
Sbjct: 247 CNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDL 306
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
TY +I+ C G + + F +M D P+ +YN LI A K + +
Sbjct: 307 VTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK--PDCMSYNTLIYAYC---KEGMMQQSK 361
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
KLL EM+ +P +FT ++ G G
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREG 390
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 37/329 (11%)
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMA---- 243
I+DV+C T + HS + R D V I G+ I R + Q A
Sbjct: 46 IVDVICST----LNHSDYSVLLPNLR-DEVKSLIPHLGYPEISRVLLRFQSDASRAITFF 100
Query: 244 -----ERGISPTMVTYNTLLKGYFRCHQLREAWEFF---LEMKKRKCEIDV--------- 286
+ G P + Y LL + A +F +E+ +K E+DV
Sbjct: 101 KWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATD 160
Query: 287 ------VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNA 340
V + +V G+ G V++ RVF E++ +G SV T N L+ L K D +++
Sbjct: 161 ECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDC 220
Query: 341 LLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRY 400
V+ M G PN T+N++ C+ + +++ +ME+ G P + TYN ++
Sbjct: 221 WQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
+C G +++ +++ M +P+L TY LI + + + A + MVDR
Sbjct: 281 YCRRGRLKEAFYLYKIMYRR--RVVPDLVTYTSLIKGLCKDGRVRE---AHQTFHRMVDR 335
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
G P ++N ++ G + +K++L
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLL 364
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF--RC 214
Y AG A +VF M C++ + SFN +L +K+ ++ LF G+ +
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKP 178
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D VSYN + C P A+ +L E+ +G+ P +VT+NTLL + Q E +
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
+M ++ ID+ TY + G + K+ +F E+ +GL P V ++NA+I+ +
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
+ A ++E+V G P+ T+ +++ +C +GD E A+E
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIE 341
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 135/288 (46%), Gaps = 20/288 (6%)
Query: 211 RFRCDSVSYNIIANGWCLIKRTPMALQVLKE------MAERGISPTMVTYNTLLKGYFRC 264
RFR + Y+ KR ++L+E M++ G + +++ Y +
Sbjct: 69 RFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISL------YGKA 122
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV-RAGLVPSVAT 323
A + F EM R C+ V+++ ++ + ++ + + +F+E+ + + P + +
Sbjct: 123 GMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVS 182
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
YN LI+ LC+KD + A+ + +E+ KG P++ T+N ++ G E E +M
Sbjct: 183 YNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV 242
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL-PNLDTYNVLISAMFVRK 442
+ + ++TYN + + + ++ +++F G+ S L P++ ++N +I
Sbjct: 243 EKNVAIDIRTYNARLLGLANEAKSKELVNLF---GELKASGLKPDVFSFNAMIRGSINEG 299
Query: 443 KSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
K ++ A E+V G+ P K TF +L + G+ E A E+ +
Sbjct: 300 KMDE---AEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 12/320 (3%)
Query: 146 TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF 205
T + +L + +A G+ R+ M + G +FN ++ C +A +
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVV 207
Query: 206 KTF----RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
+ F +R SYN I + +K+ + V ++M E G +P ++TYN ++
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
FR + + EM K D+ TY ++H + + + + M G+ P V
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
+ LI L + ++ +E V GC P++ Y V+I G G++E+A E
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKE 387
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M + G P+V TYN +IR FC AG+ ++ ++ ++M C+ PN Y+ L++ +
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN--PNFVVYSTLVNNL--- 442
Query: 442 KKSEDLVVAGKLLIEMVDRG 461
K + ++ A +++ +MV++G
Sbjct: 443 KNAGKVLEAHEVVKDMVEKG 462
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 10/305 (3%)
Query: 194 KTKRVEMAHSLFKTFRGR--FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTM 251
KT+ ++A+ F G+ FR + Y+++ + +++ EM + G T
Sbjct: 128 KTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTA 187
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
T+N L+ R+ E F++ K +Y ++H + K V+++
Sbjct: 188 CTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQ 247
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
M+ G P V TYN ++ + + +EMV G P+L TYN+++ L
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK-GLSMFEKMGDGSCSCLPNLDT 430
A+ + M + G+ P V + +I AG++E M E + G C P++
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG---CTPDVVC 364
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
Y V+I+ +L A ++ EM ++G LP FT+N ++ G + G + A +L+
Sbjct: 365 YTVMITGYI---SGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 491 -MQSR 494
M+SR
Sbjct: 422 EMESR 426
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 132 WTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
+ L+ M P + IL A KP A+ + M E G + F T++D
Sbjct: 277 YRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 192 LCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
L + ++E A F + C D V Y ++ G+ A ++ KEM E+G P
Sbjct: 337 LSRAGKLE-ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
+ TYN++++G+ + +EA EM+ R C + V Y+T+V+ AG+V ++ V
Sbjct: 396 NVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVV 455
Query: 310 DEMVRAG 316
+MV G
Sbjct: 456 KDMVEKG 462
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 162/380 (42%), Gaps = 39/380 (10%)
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVS 218
AG +A + M E G + S+NT++ LC V+ A LF T + R + V+
Sbjct: 169 AGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVT 228
Query: 219 YNIIANGWC----LIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
NII + C + L+ + + ++ +V L+ F+ + +A E +
Sbjct: 229 CNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVW 288
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
EM ++ D V Y ++ G +G + + +MV+ G+ P V TYN LI LCK+
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
A + M G P+ +Y V+I+GLC GD+ RA E++ M K + P V +
Sbjct: 349 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 395 NVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNV----------LISAMFVRKKS 444
NVVI + G+ LS+ M S PN+ T N LI A +V+ +
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLM--LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
Query: 445 ED----------------------LVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
L +A +L EM+ RG P T+ ++ GL G
Sbjct: 467 RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRL 526
Query: 483 EFAKEILRMQSRCGHALRHL 502
+ A+ +L G + H+
Sbjct: 527 KKAESLLSRIQATGITIDHV 546
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 162/365 (44%), Gaps = 49/365 (13%)
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMA---HSLFKTFRGRFR-CDSVSYNIIANG 225
F ++ ++D + +LD + K+ +A S+ +T + C S+ +I+ +
Sbjct: 72 FSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRD- 130
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
CL + AL + K+M G+ P ++T+N LL G + + +A EM++ +
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN------ 339
V+Y T++ G V K+ +F+ M + G+ P+ T N ++ LC+K + N
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLL 250
Query: 340 ---------------------------------ALLVFEEMVGKGCVPNLNTYNVVIRGL 366
AL V++EM K + YNV+IRGL
Sbjct: 251 EEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGL 310
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
C SG+M A +M M K G+ P V TYN +I C G+ ++ + M +G + P
Sbjct: 311 CSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA--P 368
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
+ +Y V+I + + D+ A + L+ M+ LP +N V++G G+ A
Sbjct: 369 DQISYKVIIQGLCIHG---DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425
Query: 487 EILRM 491
+L +
Sbjct: 426 SVLNL 430
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 157/381 (41%), Gaps = 48/381 (12%)
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
LV MR + P ++ L + + +A+ +F +M+++G R + + N I+ LC
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 194 ---------------------------------------KTKRVEMAHSLFKTFRGR-FR 213
K V A ++K +
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
DSV YN+I G C A + +M +RG++P + TYNTL+ + + EA +
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
M+ D ++Y ++ G + G+V ++ M+++ L+P V +N +I +
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
+AL V M+ G PN+ T N +I G G + A M I P T
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 394 YNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR---KKSEDL--- 447
YN+++ C G + ++++M C P++ TY L+ + + KK+E L
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQ--PDIITYTELVRGLCWKGRLKKAESLLSR 535
Query: 448 VVAGKLLIEMVDRGFLPRKFT 468
+ A + I+ V L +K+T
Sbjct: 536 IQATGITIDHVPFLILAKKYT 556
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 5/254 (1%)
Query: 148 RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT 207
R + I P + V +SM + CR D + NT+++ LCK RV+ A +
Sbjct: 413 RIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD 472
Query: 208 F-RGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKE-MAERGISPTMVTYNTLLKGYFR 263
G+F C D+V+ N + G R AL VL M E I P +V YN +++G F+
Sbjct: 473 MMTGKF-CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
H+ EA F +++K D TY ++ G V +V +K+ +D+++
Sbjct: 532 LHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFV 591
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
Y A ++ LC+ + +A ++ G +PN+ YN VI SG A + + M
Sbjct: 592 YAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMR 651
Query: 384 KHGIRPSVQTYNVV 397
K+G P T+ ++
Sbjct: 652 KNGQAPDAVTWRIL 665
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 132/318 (41%), Gaps = 19/318 (5%)
Query: 182 LNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLK 240
L ++N +++ LC RV AH L R R D V++ + G+C I+ +A +V
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFD 221
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQ-------LREAWEFFLEMKKRKCEIDVVTYTTMV 293
EM GI P +T + L+ G+ + ++E WE+ + + + +V
Sbjct: 222 EMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYM--KNETDTSMKAAAFANLV 279
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G + + M V Y +I LC+ A + M KG
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
P +YN +I GLC G RA + + + PS TY +++ C + K ++
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 414 FEKM--GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
E M +G+ YN+ + + V +++ +L+ M+ P ++T N
Sbjct: 400 LELMLRKEGA----DRTRIYNIYLRGLCVMDNPTEIL---NVLVSMLQGDCRPDEYTLNT 452
Query: 472 VLNGLALTGNQEFAKEIL 489
V+NGL G + A ++L
Sbjct: 453 VINGLCKMGRVDDAMKVL 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 161/409 (39%), Gaps = 16/409 (3%)
Query: 97 QFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAER 156
+ ++++ + F + +D R + + + M A+ + +
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCD 215
+ H A R+ M G + S+N I+ LCK A+ L + F
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
+Y ++ C T A VL+ M + + YN L+G E +
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLV 436
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL-VPSVATYNALIQVLCKK 334
M + C D T T+++G G V + +V D+M+ P T N ++ L +
Sbjct: 437 SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQ 496
Query: 335 DCVQNALLVFEEMVGKGCV-PNLNTYNVVIRGL--CHSGDMERAVEYMGRMEKHGIRPSV 391
+ AL V ++ + + P + YN VIRGL H GD A+ G++EK +
Sbjct: 497 GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGD--EAMSVFGQLEKASVTADS 554
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRK--KSEDLVV 449
TY ++I C +++ ++ + P+ ++ + A F++ +S L
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDV------IWPS-GRHDAFVYAAFLKGLCQSGYLSD 607
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
A L ++ D G +P +N V+ + +G + A +IL + G A
Sbjct: 608 ACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQA 656
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 141/353 (39%), Gaps = 46/353 (13%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GRFRCDSVSYNIIAN 224
A ++ M G D+ +F T++ C+ + +E+AH +F R R +S++ +++
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 225 GWCLIKRTPMALQVLKEM-----AERGISPTMVTYNTLL-----KGYFR----------- 263
G+ ++ +++KE+ E S + L+ +GYF
Sbjct: 241 GFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSL 300
Query: 264 -----------------CHQLRE--AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
C R A MK + + +Y ++HG G +
Sbjct: 301 CESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
+ ++ +E PS TY L++ LCK+ A V E M+ K YN+ +R
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
GLC + + + M + RP T N VI C G ++ + + + M G C
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGK-FC 479
Query: 425 LPNLDTYNVLISAMFVRKKSED-LVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
P+ T N ++ + + ++E+ L V +++ E P +N V+ GL
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE---NKIKPGVVAYNAVIRGL 529
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 227 CLIKRTP-MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM-------K 278
C ++R P AL++L + RG P + ++++ + EA FL
Sbjct: 65 CAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPD 124
Query: 279 KRKCEIDV--VTYT-TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
+R C + + + Y+ + V GV + K+ F VPS+ YN L+ LC
Sbjct: 125 ERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEF--------VPSLTNYNRLMNQLCTIY 176
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
V +A + +M +G +P++ T+ +I G C ++E A + M GIRP+ T +
Sbjct: 177 RVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLS 236
Query: 396 VVIRYFCDAGEIEKGLSMFEKM 417
V+I F ++E G + +++
Sbjct: 237 VLIGGFLKMRDVETGRKLMKEL 258
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 23/254 (9%)
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL--VPSVATY 324
++EA F MK+ C+ DV Y T+++ G KK++ + D+M G P TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 325 NALIQVLCK-----------KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME 373
LI C+ + + A +F EM+ +G VP++ TYN +I G C + +
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM---FEKMGDGSCSCLPNLDT 430
RA+E M+ G P+ TYN IRY+ EIE + M +K+G G +P T
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG----VPGSST 356
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
Y LI A+ +++ + A L++EMV+ G +PR++T+ V + L+ G E L
Sbjct: 357 YTPLIHALVETRRAAE---ARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELH 413
Query: 491 MQSRCGHALRHLKL 504
+ R G R+ ++
Sbjct: 414 KRMREGIQQRYSRV 427
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 149/336 (44%), Gaps = 28/336 (8%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTL---VSRMRSLRRGPTPRAF 150
KAL+FF ++ H + H+ + A+ D+ W VSR + + T +
Sbjct: 109 KALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASI 168
Query: 151 AILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR- 209
L + G A+ F M E+ C+ D+ ++NTI++ LC+ + A L +
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 210 --GRFRCDSVSYNIIANGWC-----------LIKRTPMALQVLKEMAERGISPTMVTYNT 256
R+ D+ +Y I+ + +C + +R A ++ +EM RG P +VTYN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
L+ G + +++ A E F +MK + C + VTY + + + V E++ + + M + G
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 317 L-VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
VP +TY LI L + A + EMV G VP TY +V L G
Sbjct: 349 HGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTL 408
Query: 376 VEYMGRMEKHG----------IRPSVQTYNVVIRYF 401
E + + + G I+P++ VV +YF
Sbjct: 409 DEELHKRMREGIQQRYSRVMKIKPTMARKEVVRKYF 444
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
V + A+ L++ L ++ V+ AL F M C P++ YN +I LC G+ ++A
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221
Query: 378 YMGRMEKHGIR--PSVQTYNVVIRYFCDAG-----------EIEKGLSMFEKMGDGSCSC 424
+ +M+ G R P TY ++I +C G + + MF +M
Sbjct: 222 LLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFR--GF 279
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
+P++ TYN LI K+ + A +L +M +G +P + T+N + ++T E
Sbjct: 280 VPDVVTYNCLIDGCC---KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 485 AKEILRMQSRCGHAL 499
A E++R + GH +
Sbjct: 337 AIEMMRTMKKLGHGV 351
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 159/362 (43%), Gaps = 10/362 (2%)
Query: 65 LAEALENSPFRWTPELVDEVLKRLWNHGP--KALQFFKHLDRHPTYIHSPSGFEHAIDIA 122
L E L + LV +V++ N + L+FF + F + + +
Sbjct: 54 LEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVL 113
Query: 123 ARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDL 182
A +D+T L+S +R R + F+I+AE GK A+ +F + + C QD
Sbjct: 114 AEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDG 173
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVS-YNIIANGWCLIKRTPMALQVLKE 241
+ I+ LC V+ A + + + +S Y + GW + + A +V+++
Sbjct: 174 FTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQD 233
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLR-------EAWEFFLEMKKRKCEIDVVTYTTMVH 294
M GI+P + +N+LL + R EA LEM+ K + ++Y ++
Sbjct: 234 MKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLS 293
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G V++S ++ ++M R+G P +Y +++VL + +EM+ +G P
Sbjct: 294 CLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP 353
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
Y +I LC + A++ +M++ + Q Y+++I C G EKG ++
Sbjct: 354 ERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELW 413
Query: 415 EK 416
E+
Sbjct: 414 EE 415
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 111/252 (44%), Gaps = 14/252 (5%)
Query: 230 KRTPMALQVL-KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
K+ A+Q+L ++ + + T++ + + + + +A F + K C D T
Sbjct: 116 KKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFT 175
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
T ++ G VK++ V ++ Y +L+ + V+ A V ++M
Sbjct: 176 VTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMK 235
Query: 349 GKGCVPNLNTYNVVIRGLCH-------SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
G P+L +N ++ LC SG + A+ M M + I+P+ +YN+++
Sbjct: 236 SAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCL 295
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
+ + + E+M C P+ +Y ++ +++ + +++ EM++RG
Sbjct: 296 GRTRRVRESCQILEQMKRSGCD--PDTGSYYFVVRVLYLTGR---FGKGNQIVDEMIERG 350
Query: 462 FLP-RKFTFNRV 472
F P RKF ++ +
Sbjct: 351 FRPERKFYYDLI 362
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 188/419 (44%), Gaps = 33/419 (7%)
Query: 111 SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVF 170
SP F+ + + D A+ ++ + R+ + A + R +V+
Sbjct: 147 SPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVY 206
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLI 229
M G +++N+FN ++ CK ++ A S+F + + + VS+N++ +G C
Sbjct: 207 KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT 266
Query: 230 KRTPMALQVLKEMAERG---ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
ALQ+L +M +SP VTYN+++ G+ + +L A +M K + +
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNE 326
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
TY +V +G AG ++ R+ DEM GLV + YN+++ L + ++ A+ V +
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD 386
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M K + T +V+RGLC +G ++ AVE+ ++ + + + +N ++ +F +
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKK 446
Query: 407 IE-----------KGLSM----FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
+ +GLS+ F + DG L+ + M K+ +LV+
Sbjct: 447 LACADQILGSMLVQGLSLDAISFGTLIDGYLK-EGKLERALEIYDGMIKMNKTSNLVIYN 505
Query: 452 KLLIEMVDRGF------------LPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSRCGH 497
++ + RG + T+N +LN TGN E A +IL +MQ + G
Sbjct: 506 SIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGE 564
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 163/387 (42%), Gaps = 58/387 (14%)
Query: 107 TYIHSPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPH 164
TY +GF A +D+A R+R M R + L + Y AG
Sbjct: 293 TYNSVINGFCKAGRLDLAERIR---------GDMVKSGVDCNERTYGALVDAYGRAGSSD 343
Query: 165 RAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIA 223
A+R+ M G + +N+I+ L +E A S+ + + + D + I+
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
G C A++ ++++E+ + +V +NTL+ + R +L A + M +
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
+D +++ T++ G+ G+++++ ++D M++ ++ YN+++ L K+ A
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA--- 520
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ--TYNVVIRYF 401
E +V + ++ TYN ++ +G++E A + + +M+K SV T+N++I +
Sbjct: 521 -EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHL 579
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
C G EK A ++L MV+RG
Sbjct: 580 CKFGSYEK----------------------------------------AKEVLKFMVERG 599
Query: 462 FLPRKFTFNRVLNGLALTGNQEFAKEI 488
+P T+ ++ + +QE E+
Sbjct: 600 VVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
+F L + Y GK RA+ ++ M + +L +N+I++ L K A ++
Sbjct: 468 SFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM 527
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG--ISPTMVTYNTLLKGYFRCHQ 266
+ D V+YN + N A +L +M ++ S ++VT+N ++ +
Sbjct: 528 EIK---DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGS 584
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+A E M +R D +TY T++ F +K + D ++ G+ P Y +
Sbjct: 585 YEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLS 644
Query: 327 LIQVLCKKD 335
+++ L ++
Sbjct: 645 IVRPLLDRE 653
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 152/369 (41%), Gaps = 48/369 (13%)
Query: 77 TPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVS 136
P+L+ + L G AL F + LD + + H+ +D R +D+ ++S
Sbjct: 108 NPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIIS 167
Query: 137 RMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM-HEHGCRQDLNSFNTILDVLCKT 195
+ + + G T + AI +R AG+P + F M +++G ++D S ++ LC+
Sbjct: 168 KYKGIAGGKTLES-AI--DRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEK 224
Query: 196 KRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLI-------------------------- 229
+A + K D +++ +GWC+
Sbjct: 225 GHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYN 284
Query: 230 -----------KRTPMALQ-----VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
K+ P LQ VL EM RG+ T+N L+ + + EA
Sbjct: 285 MMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTL 344
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL--VPSVATYNALIQVL 331
F M + C+ D TY ++ A + + + D+M AG + + Y +++L
Sbjct: 345 FGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKIL 404
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
C + +++A+ VF+ M GC P + TY++++ +C + + RA K GI S
Sbjct: 405 CGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSP 464
Query: 392 QTYNVVIRY 400
+ Y V R+
Sbjct: 465 KEYRVDPRF 473
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 12/287 (4%)
Query: 91 HGP-KALQFFKHLDRHPTYIHSPSGFEHAIDIA----ARMRDYTTAWTLVSRMRSLRRGP 145
H P KAL+ + ++ H SP +A ++ A+ R ++ TL+ ++ +
Sbjct: 44 HDPDKALKIYANVSDHSA---SPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIK 100
Query: 146 TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF 205
++ L Y A + A+R F M ++G + SFN +L+ +K + LF
Sbjct: 101 EEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLF 160
Query: 206 KTFRGRFR---CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
R+ D +SY I+ +C A++++++M +G+ T + + T+L +
Sbjct: 161 DEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLY 220
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ +L A + EM K+ CE+D Y + ++ K + +EM GL P
Sbjct: 221 KKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTI 279
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+YN L+ C++ + A V+E + G C PN T+ +I LC+S
Sbjct: 280 SYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYS 326
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 37/302 (12%)
Query: 126 RDYTT-AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNS 184
+DY + A L+ RM L P + L + +A F + DL +
Sbjct: 578 KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
+ +++ C+ + A++LF+ + R + D V+Y+++ N + L + +EM
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN-------SDPELDMKREME 690
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH--------- 294
+ P +V Y ++ Y + L++ + F +MK+R+ DVVTYT ++
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSR 750
Query: 295 ---GFGVA----------------GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
F V G++ ++KR+FD+M+ +G+ P A Y ALI CK
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYN 395
++ A ++F+ M+ G P++ Y +I G C +G + +AV+ + M + GI+P+ + +
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Query: 396 VV 397
V
Sbjct: 871 AV 872
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 147/366 (40%), Gaps = 63/366 (17%)
Query: 115 FEHAIDI-------AARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAV 167
F+ AIDI R D L+SRM + R F ER H V
Sbjct: 162 FDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYV 221
Query: 168 RVFISMHEHGCRQDLNS----------------FNTILDVLCKTKRVEMAHSLFKTFR-G 210
V ++ + +++L + ++ LC + ++A+ L + R
Sbjct: 222 LVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDA 281
Query: 211 RFRCD----SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY----- 261
D ++Y + G C R A V+ +M + GI P + Y+ +++G+
Sbjct: 282 NILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMN 341
Query: 262 --------------------------FRCH----QLREAWEFFLEMKKRKCEIDVVTYTT 291
+C+ EA++ F E ++ +D V Y
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
G G+V+++ +F EM G+ P V Y LI C + +A + EM G G
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
P++ YNV+ GL +G + A E + ME G++P+ T+N+VI DAGE++K
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Query: 412 SMFEKM 417
+ +E +
Sbjct: 522 AFYESL 527
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 11/316 (3%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLN 183
+M +++ A+ L R + + + GK A+ +F M G D+
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVI 432
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEM 242
++ T++ C + A L G + D V YN++A G A + LK M
Sbjct: 433 NYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
RG+ PT VT+N +++G +L +A F+ ++ + E D +MV GF AG +
Sbjct: 493 ENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGCL 548
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLC-KKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+ F+ +R + Y L LC +KD + A + + M G P + Y
Sbjct: 549 DHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I C ++ +A E+ + I P + TY ++I +C E ++ ++FE M
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 422 CSCLPNLDTYNVLISA 437
P++ TY+VL+++
Sbjct: 666 VK--PDVVTYSVLLNS 679
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 12/327 (3%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIAN 224
A V + M +HG D+ ++ I++ K + A +F K + R R + V + I
Sbjct: 310 AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQ 369
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
+C + A + KE E IS V YN + ++ EA E F EM +
Sbjct: 370 CYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAP 429
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
DV+ YTT++ G + G+ + + EM G P + YN L L Q A
Sbjct: 430 DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETL 489
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
+ M +G P T+N+VI GL +G++++A + +E H R + + +++ FC A
Sbjct: 490 KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE-HKSRENDAS---MVKGFCAA 545
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G ++ F ++ LP Y L +++ K + + A LL M G P
Sbjct: 546 GCLDHAFERFIRLE----FPLPK-SVYFTLFTSLCAEK--DYISKAQDLLDRMWKLGVEP 598
Query: 465 RKFTFNRVLNGLALTGNQEFAKEILRM 491
K + +++ N A+E +
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEI 625
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 30/335 (8%)
Query: 145 PTPRA--FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAH 202
P P++ F + A +A + M + G + + + ++ C+ V A
Sbjct: 561 PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR 620
Query: 203 SLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
F+ + D +Y I+ N +C + A + ++M R + P +VTY+ LL
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSD 680
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
RE M+ DVV YT M++ + ++KK +F +M R +VP V
Sbjct: 681 PELDMKRE-------MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDV 733
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
TY L++ +++ + EM P++ Y V+I C GD+ A +
Sbjct: 734 VTYTVLLKNKPERNLSR-------EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQ 786
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM--- 438
M + G+ P Y +I C G +++ +F++M + P++ Y LI+
Sbjct: 787 MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVK--PDVVPYTALIAGCCRN 844
Query: 439 -FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRV 472
FV K A KL+ EM+++G P K + + V
Sbjct: 845 GFVLK-------AVKLVKEMLEKGIKPTKASLSAV 872
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
D V Y ++ F G++ + + EM GL P V TY ++I C + +A +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG----IRPSVQTYNVVIRY 400
+EM CV N TY+ ++ G+C SGDMERA+E + MEK I P+ TY +VI+
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 401 FCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
FC+ +E+ L + ++MG+ C+PN T VLI V + ED+ KL+ ++V
Sbjct: 284 FCEKRRVEEALLVLDRMGNR--GCMPNRVTACVLIQG--VLENDEDVKALSKLIDKLVKL 339
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKEILRMQ---------SRCGHALRHLKL 504
G + F+ L E A++I R+ C H R L L
Sbjct: 340 GGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC-DSVSY 219
KP V S + C ++ + +L + + + A + + F C D+V+Y
Sbjct: 109 AKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAY 168
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
N++ + +A ++KEM G+ P ++TY +++ GY ++ +AW EM K
Sbjct: 169 NLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSK 228
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR---AGLV-PSVATYNALIQVLCKKD 335
C ++ VTY+ ++ G +G+++++ + EM + GL+ P+ TY +IQ C+K
Sbjct: 229 HDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKR 288
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
V+ ALLV + M +GC+PN T V+I+G+ + + +A+
Sbjct: 289 RVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKAL 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 126/304 (41%), Gaps = 14/304 (4%)
Query: 114 GFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM 173
+ I + A D A L+ M + P + + Y AGK A R+ M
Sbjct: 167 AYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEM 226
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-----GRFRCDSVSYNIIANGWCL 228
+H C + +++ IL+ +CK+ +E A L G ++V+Y ++ +C
Sbjct: 227 SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCE 286
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVT 288
+R AL VL M RG P VT L++G + +A ++ + ++ V+
Sbjct: 287 KRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLID---KLVKLGGVS 343
Query: 289 YTTMVHGFGVA----GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
+ V+ ++++++F M+ G+ P + + + LC + + L++
Sbjct: 344 LSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLY 403
Query: 345 EEMVGKGCVPNLNT--YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+E+ K +++ + V++ GLC G+ A + M +R V +I
Sbjct: 404 QEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALK 463
Query: 403 DAGE 406
G+
Sbjct: 464 KTGD 467
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDM-ERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
V E + C N+ T +V+ LC+ ++ + A+ + + + + YN+VIR F
Sbjct: 117 VIESYRKEECFVNVKTMRIVL-TLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLF 175
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCL-PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR 460
D G++ + ++M C L P++ TY +I+ K +D A +L EM
Sbjct: 176 ADKGDLNIADMLIKEM---DCVGLYPDVITYTSMINGYCNAGKIDD---AWRLAKEMSKH 229
Query: 461 GFLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSRCGHAL 499
+ T++R+L G+ +G+ E A E+L M+ G L
Sbjct: 230 DCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGL 269
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 190/475 (40%), Gaps = 48/475 (10%)
Query: 59 ESDPGTLAE---ALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGF 115
E+DP +A+ AL ++ W + V RL + + + R ++ F
Sbjct: 121 ETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICF 180
Query: 116 EHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE 175
ID + Y A +L ++ R PT +A+L + Y AG RA V + M
Sbjct: 181 NLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQN 240
Query: 176 HG---------------------------------------CRQDLNSFNTILDVLCKTK 196
H C+ ++N ++++ K
Sbjct: 241 HHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKAS 300
Query: 197 RVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
+ M+ L+ R + + + +Y + N + A ++ +++ E G+ P + YN
Sbjct: 301 KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 360
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
L++ Y R A E F M+ CE D +Y MV +G AG ++ VF+EM R
Sbjct: 361 ALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 420
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
G+ P++ ++ L+ K V + +EM G P+ N ++ G +
Sbjct: 421 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 480
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
+ + ME + TYN++I + AG +E+ +F ++ + + P++ T+ I
Sbjct: 481 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR--PDVVTWTSRI 538
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
A + RKK V ++ EM+D G P T +L+ + E +LR
Sbjct: 539 GA-YSRKKL--YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 590
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + L E Y+ AG P+ A +F M GC D S+N ++D + A ++
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 205 FKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
F+ + ++ S+ ++ + + + ++KEM+E G+ P N++L Y R
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 473
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
Q + + EM+ C D+ TY +++ +G AG +++ + +F E+ P V T
Sbjct: 474 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 533
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+ + I +K L VFEEM+ GC P+ T V++ +E+ + M
Sbjct: 534 WTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 593
Query: 384 K 384
K
Sbjct: 594 K 594
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
++K + DV+ + ++ +G + K+++ ++ +++ + VP+ TY LI+ C
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 337 VQNALLVFEEMVGKGCVP---NLNTYNVVIRGLC-HSGDMERAVEYMGRMEKHGIRPSVQ 392
++ A +V EM P + YN I GL G+ E A++ RM++ +P+ +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TYN++I + A + ++ +M S C PN+ TY L++A F R E L +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEM--RSHQCKPNICTYTALVNA-FAR---EGLCEKAE 341
Query: 453 LLIEMV-DRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+ E + + G P + +N ++ + G A EI + G
Sbjct: 342 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 386
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P ++ +N L+ Y + Q +EA ++++ + + TY ++ + +AG +++++ V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 309 FDEMVRAGLVP---SVATYNALIQVLCK-KDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
EM + P V YNA I+ L K K + A+ VF+ M C P TYN++I
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
+ + + M H +P++ TY ++ F G EK +FE++ +
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE- 353
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
P++ YN L+ + ++ A ++ M G P + ++N +++ G
Sbjct: 354 -PDVYVYNALMESY---SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 485 AKEILRMQSRCGHA 498
A+ + R G A
Sbjct: 410 AEAVFEEMKRLGIA 423
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 28/390 (7%)
Query: 83 EVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTA----WTLVSRM 138
EV++R W GP+ L P +H + ++ A + + A W L
Sbjct: 148 EVVQR-WKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYL---- 202
Query: 139 RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFIS--MHEHGCRQDL--NSFNTILDVLCK 194
P+ + +L + G+ ++ + + DL N++N ++ L K
Sbjct: 203 ------PSDECYVVLFDGLNQ-GRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAK 255
Query: 195 TKRVEMAHSLFKTFR-GRFRCDSVSYNIIANGWCLIKRTPM-ALQVLKEMAERGISPTMV 252
+++E+A FK + + D+ +YN + + L K P A ++ + M +
Sbjct: 256 AEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLF-LNKGLPYKAFEIYESMEKTDSLLDGS 314
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
TY ++ + +L A++ F +MK+RK ++++V G AG + S +V+ EM
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
G PS + +LI K + AL +++EM G PN Y ++I SG +
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
E A+ MEK G P+ TY+ ++ +G+++ + ++ M + P L +Y
Sbjct: 435 EVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR--PGLSSYI 492
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
L++ + K+ D VAGK+L+EM G+
Sbjct: 493 SLLT-LLANKRLVD--VAGKILLEMKAMGY 519
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 137/297 (46%), Gaps = 8/297 (2%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSY 219
G P++A ++ SM + D +++ I+ L K+ R++ A LF+ + R R +
Sbjct: 292 GLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVF 351
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK 279
+ + + R +++V EM G P+ + +L+ Y + +L A + EMKK
Sbjct: 352 SSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK 411
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
+ YT ++ +G+++ + VF +M +AG +P+ +TY+ L+++ V +
Sbjct: 412 SGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDS 471
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
A+ ++ M G P L++Y ++ L + ++ A + + M+ G V +V++
Sbjct: 472 AMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI 531
Query: 400 YFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
Y DA ++ L MG + T N +I +F L + + L+E
Sbjct: 532 YIKDAS-VDLALKWLRFMGSS------GIKTNNFIIRQLFESCMKNGLYDSARPLLE 581
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 8/211 (3%)
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP---SVATYNALIQVLCKKDCVQNALLVFE 345
Y + G + + +F+EMV+ S YN +IQ L K + ++ A F+
Sbjct: 208 YVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFK 267
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
+ GC + TYN ++ + G +A E MEK TY ++I +G
Sbjct: 268 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSG 327
Query: 406 EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
++ +F++M + P+ ++ L+ +M K+ L + K+ +EM G P
Sbjct: 328 RLDAAFKLFQQMKERKLR--PSFSVFSSLVDSM---GKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 466 KFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
F +++ A G + A + + G
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSG 413
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 190/475 (40%), Gaps = 48/475 (10%)
Query: 59 ESDPGTLAE---ALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGF 115
E+DP +A+ AL ++ W + V RL + + + R ++ F
Sbjct: 99 ETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICF 158
Query: 116 EHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE 175
ID + Y A +L ++ R PT +A+L + Y AG RA V + M
Sbjct: 159 NLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQN 218
Query: 176 HG---------------------------------------CRQDLNSFNTILDVLCKTK 196
H C+ ++N ++++ K
Sbjct: 219 HHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKAS 278
Query: 197 RVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
+ M+ L+ R + + + +Y + N + A ++ +++ E G+ P + YN
Sbjct: 279 KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 338
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
L++ Y R A E F M+ CE D +Y MV +G AG ++ VF+EM R
Sbjct: 339 ALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 398
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
G+ P++ ++ L+ K V + +EM G P+ N ++ G +
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 458
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
+ + ME + TYN++I + AG +E+ +F ++ + + P++ T+ I
Sbjct: 459 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR--PDVVTWTSRI 516
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
A + RKK V ++ EM+D G P T +L+ + E +LR
Sbjct: 517 GA-YSRKKL--YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 568
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + L E Y+ AG P+ A +F M GC D S+N ++D + A ++
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 205 FKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
F+ + ++ S+ ++ + + + ++KEM+E G+ P N++L Y R
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 451
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
Q + + EM+ C D+ TY +++ +G AG +++ + +F E+ P V T
Sbjct: 452 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 511
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
+ + I +K L VFEEM+ GC P+ T V++ +E+ + M
Sbjct: 512 WTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571
Query: 384 K 384
K
Sbjct: 572 K 572
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDC 336
++K + DV+ + ++ +G + K+++ ++ +++ + VP+ TY LI+ C
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 337 VQNALLVFEEMVGKGCVP---NLNTYNVVIRGLC-HSGDMERAVEYMGRMEKHGIRPSVQ 392
++ A +V EM P + YN I GL G+ E A++ RM++ +P+ +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TYN++I + A + ++ +M S C PN+ TY L++A F R E L +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEM--RSHQCKPNICTYTALVNA-FAR---EGLCEKAE 319
Query: 453 LLIEMV-DRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
+ E + + G P + +N ++ + G A EI + G
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 364
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P ++ +N L+ Y + Q +EA ++++ + + TY ++ + +AG +++++ V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 309 FDEMVRAGLVP---SVATYNALIQVLCK-KDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
EM + P V YNA I+ L K K + A+ VF+ M C P TYN++I
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
+ + + M H +P++ TY ++ F G EK +FE++ +
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE- 331
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
P++ YN L+ + ++ A ++ M G P + ++N +++ G
Sbjct: 332 -PDVYVYNALMESY---SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 485 AKEILRMQSRCGHA 498
A+ + R G A
Sbjct: 388 AEAVFEEMKRLGIA 401
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 182/430 (42%), Gaps = 50/430 (11%)
Query: 73 PFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAW 132
P +TP E+ L N+ +L+FF R+ H I I +R R + A
Sbjct: 66 PSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHAS 125
Query: 133 TLV---------------------SRMRSLRR-GPTPRAFAILAERYAAAGKPHRAVRVF 170
++ S ++S R G P F +L + + + AV V
Sbjct: 126 EIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVM 185
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF--------------KTFRGRFRCDS 216
+ G +++ N ++ + + + + ++ K G+ + ++
Sbjct: 186 RKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNA 245
Query: 217 VSYNIIANGWCLIKRTPMALQVLKEMAER-GISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
++N + + T M ++ +EM E G SP + +YN L++ Y + EA + +
Sbjct: 246 TTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWE 305
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
EMK R D+V Y TM+ G EV K+K +F +M G+ + TY L+ CK
Sbjct: 306 EMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAG 365
Query: 336 CVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR-----PS 390
V + L+V+ EM KG + T ++ GLC D +R VE + K +R PS
Sbjct: 366 DVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVE-AADIVKDAVREAMFYPS 424
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
Y ++++ C+ G++++ L++ +M G G P+ +TY I + E
Sbjct: 425 RNCYELLVKRLCEDGKMDRALNIQAEMVGKG---FKPSQETYRAFIDGYGIVGDEE---T 478
Query: 450 AGKLLIEMVD 459
+ L IEM +
Sbjct: 479 SALLAIEMAE 488
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 161/356 (45%), Gaps = 52/356 (14%)
Query: 186 NTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
N+IL V K ++ A F+ R R D +++N + +C + A++++KEM +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRER---DVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
GISP +VT+N L+ GY + + A + +M+ DV T+T M+ G G ++
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 306 KRVFDEMVRAGLVPSVATY-----------------------------------NALIQV 330
+F +M AG+VP+ T N+L+ +
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 331 LCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
K +++A VF+ + K ++ T+N +I G C +G +A E RM+ +RP+
Sbjct: 397 YSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKM-GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVV 449
+ T+N +I + G+ + + +F++M DG N T+N++I+ K ++
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQ--RNTATWNLIIAGYIQNGKKDE--- 507
Query: 450 AGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI----LRMQSRCGHALRH 501
A +L +M F+P T +L A + +EI LR HA+++
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCD 215
YA G+ A + F M E +D+ ++N++L C+ + E A L K
Sbjct: 226 YAKCGELDFATKFFRRMRE----RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG 281
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF- 274
V++NI+ G+ + + A+ ++++M GI+ + T+ ++ G +A + F
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 275 -----------------------LEMKKRKCEI-----------DVVTYTTMVHGFGVAG 300
L++ + E+ DV+ ++V + G
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+++ +++VFD + V T+N++I C+ A +F M PN+ T+N
Sbjct: 402 KLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHG-IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+I G +GD A++ RMEK G ++ + T+N++I + G+ ++ L +F KM
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 118/269 (43%), Gaps = 10/269 (3%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-GR 211
L + Y+ GK A +VF S+ +D+ ++N+++ C+ A+ LF +
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG-ISPTMVTYNTLLKGYFRCHQLREA 270
R + +++N + +G+ A+ + + M + G + T+N ++ GY + + EA
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 271 WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQV 330
E F +M+ + + VT +++ K + + ++R L A NAL
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDT 568
Query: 331 LCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
K ++ + +F M K + T+N +I G G A+ +M+ GI P+
Sbjct: 569 YAKSGDIEYSRTIFLGMETKDII----TWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
T + +I G +++G +F + +
Sbjct: 625 RGTLSSIILAHGLMGNVDEGKKVFYSIAN 653
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 283 EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL 342
E DV T ++ + G + +++VFD M L T++A+I +++ +
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAK 167
Query: 343 VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFC 402
+F M+ G +P+ + +++G + GD+E + K G+ ++ N ++ +
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 403 DAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
GE++ F +M + ++ +N ++ A K E+ V +L+ EM G
Sbjct: 228 KCGELDFATKFFRRMRE------RDVIAWNSVLLAYCQNGKHEEAV---ELVKEMEKEGI 278
Query: 463 LPRKFTFNRVLNGLALTGNQEFAKEILR 490
P T+N ++ G G + A ++++
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 72/387 (18%)
Query: 117 HAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEH 176
+A + M D A + +M+ L PT + L + Y AGKP R+ + M E
Sbjct: 123 NAFSESGNMEDAVQA---LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 177 G---CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIAN-------- 224
G ++ +FN ++ CK K+VE A + K R D+V+YN IA
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 225 -----------------------------GWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
G+C R L+ ++ M E + +V +N
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 256 TLLKGYFRCHQLREAWEFFLE-------------------------MKKRKCEIDVVTYT 290
+L+ G+ E L MK+ + DV+TY+
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYS 359
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK 350
T+++ + AG ++K+ +VF EMV+AG+ P Y+ L + + + A + E ++ +
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 419
Query: 351 GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
PN+ + VI G C +G M+ A+ +M K G+ P+++T+ ++ + + + K
Sbjct: 420 S-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 478
Query: 411 LSMFEKMGDGSCSCLPNLDTYNVLISA 437
+ + M C P T+ +L A
Sbjct: 479 EEVLQMM--RGCGVKPENSTFLLLAEA 503
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 151/351 (43%), Gaps = 62/351 (17%)
Query: 152 ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR 211
+L ER G+PH A VF ++ E G R L S+ T+L + K+
Sbjct: 54 VLIER----GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ-------------- 95
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
Y I++ ++ E+ + G + +N ++ + + +A
Sbjct: 96 -------YGSISS-------------IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAV 135
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV---PSVATYNALI 328
+ L+MK+ TY T++ G+G+AG+ ++S + D M+ G V P++ T+N L+
Sbjct: 136 QALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLV 195
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA----VEYMGRMEK 384
Q CKK V+ A V ++M G P+ TYN + G+ RA VE M EK
Sbjct: 196 QAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKS 444
+P+ +T +V+ +C G + GL +M + NL +N LI+ FV
Sbjct: 256 A--KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA--NLVVFNSLING-FVEVMD 310
Query: 445 EDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRC 495
D + L + + +FN + L GNQ+ ++L + C
Sbjct: 311 RDGIDEVTLTLLL---------MSFNEEVE---LVGNQKMKVQVLTLMKEC 349
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 137/363 (37%), Gaps = 63/363 (17%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
+AL K L +PT + + IA + + L+ ++ GP R F +L
Sbjct: 136 QALLKMKELGLNPT-TSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK---TKRVEMAHSLFKTFRG 210
+ + K A V M E G R D ++NTI + T R E +
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 211 RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA 270
+ + + + I+ G+C R L+ ++ M E + +V +N+L+ G+
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314
Query: 271 WEFFLE-------------------------MKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
E L MK+ + DV+TY+T+++ + AG ++K+
Sbjct: 315 DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 374
Query: 306 KRVFDEMVRAGLVPSVATYNAL----------------------------------IQVL 331
+VF EMV+AG+ P Y+ L I
Sbjct: 375 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGW 434
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
C + +A+ VF +M G PN+ T+ ++ G +A E + M G++P
Sbjct: 435 CSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPEN 494
Query: 392 QTY 394
T+
Sbjct: 495 STF 497
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 78/163 (47%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
++ + +++AG +A +VF M + G + D ++++ + + K + A L +T
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Query: 210 GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLRE 269
R + V + + +GWC A++V +M + G+SP + T+ TL+ GY Q +
Sbjct: 418 VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 477
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
A E M+ + + T+ + + VAG +S + + +
Sbjct: 478 AEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 520
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 165 RAVRVFISMHEHGCRQDLNS--FNTILDVLCKTKRVEMAHSLFKT-FRGRFRCDSVSYNI 221
R + F +H+ + +S ++ LC V + L K + Y
Sbjct: 194 RKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAK 253
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
+ +G+C I +VL M P+M Y ++KG + EA+ F +K +
Sbjct: 254 LISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKG 313
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
D V YTTM+ GF G + +++++ EM++ G+ P+ YN +I K+ +
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
+ EM+ G + + N +I+G C G + A E M + G+ P+ TYN +I+ F
Sbjct: 374 AFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433
Query: 402 CDAGEIEKGLSMFEKM 417
C ++EKGL +++++
Sbjct: 434 CKENKVEKGLKLYKEL 449
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%)
Query: 219 YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
Y I G C+ K+ A + K + ++G +P V Y T+++G+ L A + + EM
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
K+ + Y M+HG GE+ + ++EM+R G ++ + N +I+ C
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
A +F+ M G PN TYN +I+G C +E+ ++ ++ G++PS Y ++
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Query: 399 R 399
R
Sbjct: 466 R 466
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
+ I+ LC K+ A+ +FK + + + D V Y + G+C A ++ EM
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 303
++G+ P YN ++ G+F+ ++ F+ EM + +++ TM+ GF G+
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 304 KSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVI 363
++ +F M G+ P+ TYNALI+ CK++ V+ L +++E+ G P+ Y ++
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Query: 364 RGL 366
R L
Sbjct: 466 RNL 468
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 9/263 (3%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A++V + + GIS ++VT N++L G + +L WE EM + E D ++
Sbjct: 164 AIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES--EFDSERIRCLIR 221
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
G+V + + + ++ GL P Y LI C+ V M+ P
Sbjct: 222 ALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP 281
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM- 413
++ Y +I+GLC + A ++ G P Y +IR FC+ G + +
Sbjct: 282 SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLW 341
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
FE + G PN YNV+I F R ++ + EM+ G+ + N ++
Sbjct: 342 FEMIKKG---MRPNEFAYNVMIHGHFKRG---EISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 474 NGLALTGNQEFAKEILRMQSRCG 496
G G + A EI + S G
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETG 418
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL-FKTFRGRFRCDSVSYN 220
K A +F ++ + G D + T++ C+ + A L F+ + R + +YN
Sbjct: 298 KQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYN 357
Query: 221 IIANGWCLIKRTPMAL--QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
++ +G KR ++L EM G TM++ NT++KG+ + EA+E F M
Sbjct: 358 VMIHGH--FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMS 415
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+ + +TY ++ GF +V+K +++ E+ GL PS Y AL++ L D V
Sbjct: 416 ETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVA 475
Query: 339 NAL 341
+L
Sbjct: 476 TSL 478
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 12/292 (4%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC---RQDLNSFNT 187
A+ ++ +R++ P A+ ++AE + G + V + G D +F
Sbjct: 242 AFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAF-- 299
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
ILD++ + E G+F D+ + + + A++ L M G
Sbjct: 300 ILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDS-AVEFLVYMVSTGK 358
Query: 248 SPTMVTYNTLLKGYFR---CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
P + T + L K R L +A+E L K E+ +Y+ M+ AG V++
Sbjct: 359 LPAIRTLSKLSKNLCRHDKSDHLIKAYEL-LSSKGYFSELQ--SYSLMISFLCKAGRVRE 415
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
S EM + GL P V+ YNALI+ CK + ++ A +++EM +GC NL TYNV+IR
Sbjct: 416 SYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIR 475
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
L G+ E ++ +M + GI P Y +I C +IE + +F K
Sbjct: 476 KLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 9/305 (2%)
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
IL LCK R A + + R C D ++Y +IA + + VLK+ +
Sbjct: 229 ILHSLCKCSREMDAFYILEELRN-IDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
G++P Y + +L EA E + K +D ++ G A + +
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI-GSVSAVDPDSA 346
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
MV G +P++ T + L + LC+ D + + +E + KG L +Y+++I
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISF 406
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
LC +G + + + M+K G+ P V YN +I C A I ++++M C
Sbjct: 407 LCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM- 465
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
NL TYNVLI + ++E+ + +L +M++RG P + + ++ GL E A
Sbjct: 466 -NLTTYNVLIRKLSEEGEAEESL---RLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 486 KEILR 490
E+ R
Sbjct: 522 MEVFR 526
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 172/453 (37%), Gaps = 47/453 (10%)
Query: 77 TPELVDEVLKR-LWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLV 135
+P LV V+ L NH AL FF + P Y H + + R ++ L
Sbjct: 46 SPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALF 105
Query: 136 SRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT 195
+++S + + L + K A V G + N +L L
Sbjct: 106 KQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSD 165
Query: 196 KRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEM--AERGISPTMV 252
+ A LF R + +++ + + +C T L+++ E+ A I+ +++
Sbjct: 166 GCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSII 225
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
+L +C + +A+ E++ C+ D + Y + F V G + + + V +
Sbjct: 226 AL-LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKK 284
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFE--------------------------- 345
+ G+ P + Y A I L + A V E
Sbjct: 285 RKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPD 344
Query: 346 -------EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
MV G +P + T + + + LC + ++ + G +Q+Y+++I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
+ C AG + + + ++M + P++ YN LI A K+E + A KL EM
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLA--PDVSLYNALIEACC---KAEMIRPAKKLWDEMF 459
Query: 459 DRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
G T+N ++ L+ G A+E LR+
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGE---AEESLRL 489
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 22/275 (8%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + + + AG RA +V M G + ++N +L CK +++ A L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 205 FK--TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
+ T D VSYNII +G LI + AL EM RGI+PT ++Y TL+K +
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 263 RCHQLREAWEFFLEM-KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
Q + A F EM + ++D++ + +V G+ G ++ ++RV M G P+V
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCV-------------------PNLNTYNVV 362
ATY +L + + +ALL+++E+ + V P+ + +
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTL 689
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVV 397
+ ++A+E + ME++GI P+ Y +
Sbjct: 690 ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK---RKCEIDVVTYTTMVHGFGVAGEVKK 304
+P Y TL+KGY + ++ + M++ R D VTYTT+V F AG + +
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV-GKGCVPNLNTYNVVI 363
+++V EM R G+ + TYN L++ CK+ + A + EM G P++ +YN++I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 364 RGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
G D A+ + M GI P+ +Y +++ F +G+ + +F++M +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA 477
+ +L +N+L+ ED A +++ M + GF P T+ + NG++
Sbjct: 591 KV-DLIAWNMLVEGYCRLGLIED---AQRVVSRMKENGFYPNVATYGSLANGVS 640
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 6/232 (2%)
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQ---DLNSFNTILDVLCKTKRVEM 200
P R + L + Y G+ R+ +M R D ++ T++ ++
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 201 AHS-LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER-GISPTMVTYNTLL 258
A L + R + ++YN++ G+C + A +L+EM E GI P +V+YN ++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
G A FF EM+ R ++YTT++ F ++G+ K + RVFDEM+ V
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 319 P-SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
+ +N L++ C+ +++A V M G PN+ TY + G+ +
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 168/414 (40%), Gaps = 64/414 (15%)
Query: 135 VSRMRSLRRG---PTPRAFAILAERYAAAGK--PHRAVRVFISMHEH-----------GC 178
VS ++S+ R P +A+ +A+G P ++++FI++
Sbjct: 173 VSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVGQS 232
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMAL 236
R D +FN +L+ + LF+ + C D ++YN++ + R + +
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEM-SEWDCEPDVLTYNVMIKLCARVGRKELIV 291
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK---CEI--------- 284
VL+ + ++GI M T ++L+ Y LR A M++++ C++
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDL 351
Query: 285 -----------DVVTYTTMVHGFGVAGEVKKSK--RVFDEMVRAGLVPS----------- 320
+ G+ EV + VF +++ + PS
Sbjct: 352 KEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFA 411
Query: 321 --VATYNALIQVLCKKDCVQNALLVFEEM---VGKGCVPNLNTYNVVIRGLCHSGDMERA 375
Y L++ K V + + E M + P+ TY V+ ++G M+RA
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
+ + M + G+ + TYNV+++ +C +I++ + +M + + P++ +YN++I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA-GIEPDVVSYNIII 530
Query: 436 SAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
+ +D A EM RG P K ++ ++ A++G + A +
Sbjct: 531 DGCIL---IDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC-- 214
Y G A +VF M E C++ SFN +L+ +K+ ++ +FK G+
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D SYN + G C A+ ++ E+ +G+ P +T+N LL + + E + +
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
M ++ + D+ +Y + G + + ++ +FD++ L P V T+ A+I+ +
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
+ A+ ++E+ GC P +N ++ +C +GD+E A E
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYE 338
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 6/258 (2%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK-KRKCEIDVVTYTTMV 293
A +V EM ER T +++N LL + F E+ K E DV +Y T++
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
G G ++ + DE+ GL P T+N L+ K + ++ MV K
Sbjct: 185 KGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
++ +YN + GL E V +++ + ++P V T+ +I+ F G++++ ++
Sbjct: 245 RDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITW 304
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
++++ C L + +N L+ A+ K+ DL A +L E+ + L + V+
Sbjct: 305 YKEIEKNGCRPLKFV--FNSLLPAIC---KAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 474 NGLALTGNQEFAKEILRM 491
+ L Q+ A+EI+ +
Sbjct: 360 DALVKGSKQDEAEEIVEL 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC---KKDCVQNALLVFEEMV 348
+++ +G G + +++VFDEM + ++NAL+ K D V+ +F+E+
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEG---IFKELP 168
Query: 349 GKGCV-PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
GK + P++ +YN +I+GLC G AV + +E G++P T+N+++ G+
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
E+G ++ +M + + ++ +YN + + + KSE++V L ++ P F
Sbjct: 229 EEGEQIWARMVEKNVK--RDIRSYNARLLGLAMENKSEEMV---SLFDKLKGNELKPDVF 283
Query: 468 TFNRVLNGLALTG 480
TF ++ G G
Sbjct: 284 TFTAMIKGFVSEG 296
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 159/421 (37%), Gaps = 44/421 (10%)
Query: 94 KALQFFKHL--DRHPTYIH---SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPR 148
KA +FFK D + H S + ID + A RM PT
Sbjct: 275 KAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
F + Y G+ + +M H C D ++N ++ + K +E A + FK
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEM 393
Query: 209 RGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
+ + D VSY + + + A ++ EM + + T + L + Y L
Sbjct: 394 KDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEML 453
Query: 268 REAWEFF--------LEMKKRKCEID-------------------------VVTYTTMVH 294
++W +F + + ID V+ Y M+
Sbjct: 454 EKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIK 513
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
+G++ +K+ +F+ M+ G+ P TYN L+Q+L D E+M G V
Sbjct: 514 AYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS 573
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+ Y VI G + A E M ++ I P V Y V+I F D G +++ +S
Sbjct: 574 DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYV 633
Query: 415 EKMGDGSCSCLP-NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
E M + +P N YN LI ++ + L++ ++ P +T N ++
Sbjct: 634 EAMKEAG---IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 474 N 474
N
Sbjct: 691 N 691
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 147/354 (41%), Gaps = 21/354 (5%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ + + Y +G+ A F M E G +FNT++ + ++ SL KT +
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 210 GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLRE 269
D+ +YNI+ + A KEM + G+ P V+Y TLL + H + E
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A EM EID T + + + A ++KS F AG + S Y+A I
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG-YSANID 479
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNT-----YNVVIRGLCHSGDMERAVEYMGRMEK 384
++ + A VF C +N YNV+I+ S E+A E M
Sbjct: 480 AYGERGYLSEAERVFI------CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMS 533
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS--CSCLPNLDTYNVLISAMFVRK 442
+G+ P TYN +++ A KG EKM + C+P Y +IS+ FV
Sbjct: 534 YGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP----YCAVISS-FV-- 586
Query: 443 KSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
K L +A ++ EMV+ P + ++N A TGN + A + G
Sbjct: 587 KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 15/267 (5%)
Query: 164 HRAVRVFISMHEHGCRQ-DLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNI 221
RAV +F GC + ++ +N +L +L K + SL+ + R + + +Y
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
+ + + AL L +M++ G+ P VT +L+ Y + + ++A EFF KK
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFF---KKWS 284
Query: 282 CE---------IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
C+ + TY TM+ +G +G++K++ F M+ G+VP+ T+N +I +
Sbjct: 285 CDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYG 344
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
+ + + M C P+ TYN++I + D+ERA Y M+ G++P
Sbjct: 345 NNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPV 403
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGD 419
+Y ++ F +E+ + +M D
Sbjct: 404 SYRTLLYAFSIRHMVEEAEGLIAEMDD 430
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 48/251 (19%)
Query: 270 AWEFFLEMKKRKC-EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
A E F K + C E++V+ Y M+ G A + + + ++DEM+R G+ P +TY LI
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPN--------------------------------- 355
V K +AL +M G P+
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 356 --------LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
TYN +I SG ++ A E RM + GI P+ T+N +I + + G++
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
+ S+ + M C P+ TYN+LIS + K+ D+ AG EM D G P
Sbjct: 350 GEVTSLMKTM---KLHCAPDTRTYNILIS---LHTKNNDIERAGAYFKEMKDDGLKPDPV 403
Query: 468 TFNRVLNGLAL 478
++ +L ++
Sbjct: 404 SYRTLLYAFSI 414
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 109/268 (40%), Gaps = 5/268 (1%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A L M S P + L + A+A PH+ M E G D + ++
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 191 VLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP 249
K ++ MA ++K D V Y ++ N + A+ ++ M E GI
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFF---LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
V YN+L+K Y + L EA + L+ + DV T M++ + V+K++
Sbjct: 644 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+FD M + G T+ ++ + K + A + ++M + + +YN V+
Sbjct: 704 AIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLF 762
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTY 394
G + AVE M GI+P T+
Sbjct: 763 ALDGRFKEAVETFKEMVSSGIQPDDSTF 790
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 103/233 (44%), Gaps = 9/233 (3%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + +L +A G +A+ +M E G + +N+++ + K ++ A ++
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLI----KRTPM--ALQVLKEMAERGISPTMVTYNTLL 258
++ C+ Y + C+I +R+ + A + M +RG T+ +L
Sbjct: 668 YRKLLQS--CNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMML 724
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
Y + + EA + +M++ K D ++Y +++ F + G K++ F EMV +G+
Sbjct: 725 CMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
P +T+ +L +L K + A+ EE+ K L + + L GD
Sbjct: 785 PDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGD 837
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVS 218
AG+ +RA+ + M + GC SFN IL++L K + H +F + + D+
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 219 YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
NI+ G C ALQ+L E ++ P ++T++ L++G+ + EA++ M+
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
K + E D +T+ ++ G G V++ + + M G P+ TY ++ L K
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
A + +M+ G P+ +Y ++ GLC + + + +M HG P + V+
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Query: 399 R 399
+
Sbjct: 385 Q 385
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 139/312 (44%), Gaps = 8/312 (2%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRC---DSVSYNIIANGWCLIKRTPMALQVLKE 241
+ +++ + K + + +T + RC + YN++ L R A+++L
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M + G P+ ++N +L E + F+ K EID ++ G +G
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
++ + ++ DE + P+V T++ LI+ C K + A + E M + P+ T+N+
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I GL G +E ++ + RM+ G P+ TY V+ D + M +M S
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM--IS 335
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGN 481
P+ +Y ++ + +++ +V +L +MV+ GF+P+ + +V+ + N
Sbjct: 336 WGMRPSFLSYKKMVLGLC---ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNN 392
Query: 482 QEFAKEILRMQS 493
+ + R+ +
Sbjct: 393 DDSQANLDRITA 404
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 97 QFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAER 156
+FF +L R Y + AI+I M D+ W P+ ++F +
Sbjct: 132 EFFYNLMR--IYGNLAGRINRAIEILFGMPDFG-CW------------PSSKSFNFILNL 176
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCD 215
+A ++F+S + G D N ++ LC++ +E A L F + + R +
Sbjct: 177 LVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPN 236
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
++++ + G+C + A ++L+ M + I P +T+N L+ G + ++ E +
Sbjct: 237 VMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLE 296
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
MK + CE + TY +++G ++K + +M+ G+ PS +Y ++ LC+
Sbjct: 297 RMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Query: 336 CVQNALLVFEEMVGKGCVP 354
V V +MV G VP
Sbjct: 357 SVVEMDWVLRQMVNHGFVP 375
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 145/337 (43%), Gaps = 40/337 (11%)
Query: 111 SPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA-FAILAERYAAAGKPHRAVRV 169
+P + I A+ +++ + + TP + F + Y +G+ A+ V
Sbjct: 71 TPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEV 130
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKR-VEMA-HSLFKTFRGRFRCDSVSYNIIANGWC 227
F + C + N +L VL + ++ +E+ L K R R + ++ I+ + C
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALC 190
Query: 228 LIKRTPMALQVLKEMAERGI-------------------------------------SPT 250
I A ++++ M++ + SP
Sbjct: 191 RIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPG 250
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
+ Y +++ + +E +MK + E D+V YT ++ G + K+ ++FD
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD 310
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
E++ GL P V TYN I LCK++ ++ AL + M G PN+ TYN++I+ L +G
Sbjct: 311 ELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
D+ RA ME +G+ + T++++I + + E+
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 407
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 211 RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA 270
R D V Y I+ G + P A ++ E+ G++P + TYN + G + + + A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 271 WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQV 330
+ M K E +VVTY ++ AG++ ++K ++ EM G+ + T++ +I
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Query: 331 LCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM 382
+ D V A + EE + VI LC G M++AVE + +
Sbjct: 401 YIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 143/346 (41%), Gaps = 61/346 (17%)
Query: 199 EMAHSLFKT-----FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVT 253
++ HS FKT + ++ + + N++ + + + +L PT
Sbjct: 19 KIPHSSFKTKWNENLKQKYAMEELRSNLLTDS----ENASVMRTLLSSFQLHNCEPTPQA 74
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMK-KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
Y ++K + QL ++ K + + ++ +G +G ++++ VF ++
Sbjct: 75 YRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKI 134
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL----NTYNVVIRGLCH 368
VPS T NAL+ VL +K + +L + E++ K C + +T+ ++I LC
Sbjct: 135 PNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGVRLEESTFGILIDALCR 191
Query: 369 SGDMERAVE-------------------------------------YMGRMEKHGIRPSV 391
G+++ A E Y+ + K P +
Sbjct: 192 IGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGL 251
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL-PNLDTYNVLISAMFVRKKSEDLVVA 450
+ Y VV+R+ + G ++ +S+ +M C + P+L Y +++ + ED A
Sbjct: 252 RDYTVVMRFLVEGGRGKEVVSVLNQM---KCDRVEPDLVCYTIVLQGVIA---DEDYPKA 305
Query: 451 GKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
KL E++ G P +T+N +NGL + E A +++ ++ G
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 1/212 (0%)
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
+R R P R + ++ G+ V V M DL + +L + +
Sbjct: 242 LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED 301
Query: 198 VEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
A LF D +YN+ NG C AL+++ M + G P +VTYN
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAG 316
L+K + L A + EM+ + T+ M+ + EV + + +E
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 317 LVPSVATYNALIQVLCKKDCVQNALLVFEEMV 348
+ + +I LC+K + A+ + +V
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 139/295 (47%), Gaps = 15/295 (5%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNII-----ANGWCLIKRTPMALQV 238
+N + V K+K +E + LF R + D+ ++ I NG + KR A++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNG--VPKR---AVEW 232
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
++M+ G P VT ++ Y R + A + + K ID VT++T++ +GV
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
+G +++EM G+ P++ YN LI + + A +++++++ G PN +T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
Y ++R + + A+ M++ G+ +V YN ++ D +++ +F+ M
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
+ +C P+ T++ LI+ + + A L++M + GF P F V+
Sbjct: 413 NCE-TCDPDSWTFSSLITVYACSGRVSEAEAA---LLQMREAGFEPTLFVLTSVI 463
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 11/301 (3%)
Query: 141 LRRG--PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
L RG P F + G P RAV F M GC D + ++D + V
Sbjct: 202 LERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV 261
Query: 199 EMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
+MA SL+ R ++R D+V+++ + + + L + +EM G+ P +V YN L
Sbjct: 262 DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRL 321
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
+ R + +A + ++ + TY +V +G A + ++ EM GL
Sbjct: 322 IDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVG-KGCVPNLNTYNVVIRGLCHSGDMERAV 376
+V YN L+ + V A +F++M + C P+ T++ +I SG + A
Sbjct: 382 SLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAE 441
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-------GDGSCSCLPNLD 429
+ +M + G P++ VI+ + A +++ + F+++ D C CL N+
Sbjct: 442 AALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVM 501
Query: 430 T 430
T
Sbjct: 502 T 502
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
+V+ Y + F + +++KS+++FDEM+ G+ P AT+ +I + + A+ F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
E+M GC P+ T +I +G+++ A+ R R T++ +IR + +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G + L+++E+M + PNL YN LI +M K+ + K +++ GF P
Sbjct: 294 GNYDGCLNIYEEM--KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYK---DLITNGFTP 348
Query: 465 RKFTFNRVLN--GLALTGNQEFA 485
T+ ++ G A G+ A
Sbjct: 349 NWSTYAALVRAYGRARYGDDALA 371
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 21/278 (7%)
Query: 144 GPTPRAFAILAE---RYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
G T +A A++ E R AG RAV ++ C +++
Sbjct: 259 GETEKAVALILELIDRKYLAGDDLRAV-----------------LGMVVRGFCNEMKMKA 301
Query: 201 AHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A S+ F D + + + +C P AL L +M +G+ V + +L+
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
Y + EA E F E + +D V Y G V+++ + EM G+VP
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
V Y LI C + V +AL + +EM+G G P+L TYNV++ GL +G E +E
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIY 481
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
RM+ G +P+ T +V+I C A ++++ F +
Sbjct: 482 ERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 149/370 (40%), Gaps = 88/370 (23%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
+N D L K RVE A L + + R D ++Y + +G+CL + AL ++ EM
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 244 ERGISPTMVTYNTLLKGYFR-----------------------------------CHQLR 268
G+SP ++TYN L+ G R +++
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 269 EAWEFF--LEMK---------KRKCEIDVV-----------------TYTTMVHGFGVAG 300
EA +FF LE K K CE + Y + + G
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
++K+ V +M + P + +I CK + V+ A ++F+ MV +G +P+L TY
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI-RYF---------CDA-GEIEK 409
++I C ++++A M++ GI+P V TY V++ RY C GE+ K
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 410 G-----LSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
L F G G ++ Y VLI + K +L A +L M+D G P
Sbjct: 691 RKASEVLREFSAAGIG-----LDVVCYTVLIDR---QCKMNNLEQAAELFDRMIDSGLEP 742
Query: 465 RKFTFNRVLN 474
+ +++
Sbjct: 743 DMVAYTTLIS 752
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 27/263 (10%)
Query: 147 PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK 206
P A + Y AG +A + F+ + E+ R+ + + + LC +E AH + K
Sbjct: 524 PENKASFVKGYCEAGLSKKAYKAFVRL-EYPLRKSV--YIKLFFSLCIEGYLEKAHDVLK 580
Query: 207 TFR------GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG 260
GR C + +C + A + M ERG+ P + TY ++
Sbjct: 581 KMSAYRVEPGRSMCGK-----MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHT 635
Query: 261 YFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF-----------GVAGEV--KKSKR 307
Y R ++L++A F +MK+R + DVVTYT ++ + V GEV +K+
Sbjct: 636 YCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASE 695
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
V E AG+ V Y LI CK + ++ A +F+ M+ G P++ Y +I
Sbjct: 696 VLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYF 755
Query: 368 HSGDMERAVEYMGRMEKHGIRPS 390
G ++ AV + + K PS
Sbjct: 756 RKGYIDMAVTLVTELSKKYNIPS 778
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 176/447 (39%), Gaps = 57/447 (12%)
Query: 85 LKRLWN---HGPK-ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAW-------- 132
L+RL N P AL F + L H SP+ ++ A + T W
Sbjct: 59 LQRLLNSTRDDPNLALSFLRQLKEHGV---SPN-----VNAYATLVRILTTWGLDIKLDS 110
Query: 133 TLVSRMRSLRRGPT---------------PRAFAI------LAERYAAAGKPHRAVRVFI 171
LV +++ RG T R+F + L + Y + G A V
Sbjct: 111 VLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLF 170
Query: 172 SMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIK 230
C D+ + N +++ + + ++ M +LFK + C + +Y I+ C
Sbjct: 171 QSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKG 230
Query: 231 RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK--CEIDVVT 288
A +L E + ++ Y T + G + +A LE+ RK D+
Sbjct: 231 NLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRA 284
Query: 289 YTTMV-HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
MV GF ++K ++ V EM G V A+I CK + AL ++M
Sbjct: 285 VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKM 344
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
+GKG N +++++ C A+E I YNV G +
Sbjct: 345 LGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRV 404
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
E+ + ++M D +P++ Y LI ++ K D A L+ EM+ G P
Sbjct: 405 EEAFELLQEMKDR--GIVPDVINYTTLIDGYCLQGKVVD---ALDLIDEMIGNGMSPDLI 459
Query: 468 TFNRVLNGLALTGNQEFAKEIL-RMQS 493
T+N +++GLA G++E EI RM++
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKA 486
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 14/344 (4%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI----LDVLCKTKRVEM 200
P ++ L G+ A+ +F M GCR D + +N + L K K +E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 201 AHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
+G RC + V+YNI+ + + + K++ +SP + T+N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
Y + ++E M+ +C+ D++T+ ++ +G E +K ++ F ++R+
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P++ T+N++I K + A VF++M +P+ TY +I + G + RA E
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ + T N ++ +C G + +F + P+ TY L A
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNA--SAFRVHPDASTYKFLYKAY 428
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
E + + L+ +M G +P K F L L + G++
Sbjct: 429 TKADMKEQVQI---LMKKMEKDGIVPNKRFF---LEALEVFGSR 466
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 135 VSRMRSLRR-GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
+ +M+ + R P + IL +A +GK + +F + D+ +FN ++D
Sbjct: 195 LDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYG 254
Query: 194 KTKRV-EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
K + EM L + + D +++N++ + + + Q K + PT+
Sbjct: 255 KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP 314
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
T+N+++ Y + + +A F +M +TY M+ +G G V +++ +F+E+
Sbjct: 315 TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
+ V +T NA+++V C+ A +F P+ +TY + + +
Sbjct: 375 GESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMK 434
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
E+ M +MEK GI P+ R+F +A E+
Sbjct: 435 EQVQILMKKMEKDGIVPNK-------RFFLEALEV 462
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 272 EFFLEMKKRKCEI-DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI-- 328
E F M+K++ I D Y+ ++ G G+ + + +F EM +G P + YNALI
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 329 --QVLCKKDCVQNALLVFEEMVG-KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
K ++ ++M G + C PN+ TYN+++R SG +++ ++
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
+ P V T+N V+ + G I++ ++ +M S C P++ T+NVLI + +++ E
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM--RSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
+ K L+ ++ LP TFN ++
Sbjct: 296 KMEQTFKSLMRSKEKPTLP---TFNSMI 320
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 16/176 (9%)
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
+P Y+ LI V+ KK + A+ +F EM GC P+ + YN +I H+ D +A+E
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 378 ----YMGRMEKHGI---RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
Y+ +M+ GI +P+V TYN+++R F +G++++ ++F+ + S P++ T
Sbjct: 190 KVRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVS--PDVYT 245
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
+N ++ A K+ + +L M P TFN +++ QEF K
Sbjct: 246 FNGVMDAY---GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG--KKQEFEK 296
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 14/344 (4%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI----LDVLCKTKRVEM 200
P ++ L G+ A+ +F M GCR D + +N + L K K +E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 201 AHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
+G RC + V+YNI+ + + + K++ +SP + T+N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
Y + ++E M+ +C+ D++T+ ++ +G E +K ++ F ++R+
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
P++ T+N++I K + A VF++M +P+ TY +I + G + RA E
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
+ + T N ++ +C G + +F + P+ TY L A
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNA--SAFRVHPDASTYKFLYKAY 428
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQ 482
E + + L+ +M G +P K F L L + G++
Sbjct: 429 TKADMKEQVQI---LMKKMEKDGIVPNKRFF---LEALEVFGSR 466
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 135 VSRMRSLRR-GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
+ +M+ + R P + IL +A +GK + +F + D+ +FN ++D
Sbjct: 195 LDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYG 254
Query: 194 KTKRV-EMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
K + EM L + + D +++N++ + + + Q K + PT+
Sbjct: 255 KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP 314
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
T+N+++ Y + + +A F +M +TY M+ +G G V +++ +F+E+
Sbjct: 315 TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
+ V +T NA+++V C+ A +F P+ +TY + + +
Sbjct: 375 GESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMK 434
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
E+ M +MEK GI P+ R+F +A E+
Sbjct: 435 EQVQILMKKMEKDGIVPNK-------RFFLEALEV 462
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 272 EFFLEMKKRKCEI-DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI-- 328
E F M+K++ I D Y+ ++ G G+ + + +F EM +G P + YNALI
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 329 --QVLCKKDCVQNALLVFEEMVG-KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
K ++ ++M G + C PN+ TYN+++R SG +++ ++
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
+ P V T+N V+ + G I++ ++ +M S C P++ T+NVLI + +++ E
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM--RSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
+ K L+ ++ LP TFN ++
Sbjct: 296 KMEQTFKSLMRSKEKPTLP---TFNSMI 320
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 16/176 (9%)
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
+P Y+ LI V+ KK + A+ +F EM GC P+ + YN +I H+ D +A+E
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 378 ----YMGRMEKHGI---RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
Y+ +M+ GI +P+V TYN+++R F +G++++ ++F+ + S P++ T
Sbjct: 190 KVRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVS--PDVYT 245
Query: 431 YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAK 486
+N ++ A K+ + +L M P TFN +++ QEF K
Sbjct: 246 FNGVMDAY---GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG--KKQEFEK 296
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 7/319 (2%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARM-RDYTTAWTLVSRMRSLRRGPTPRAFAI 152
K L FF + Y H F+H + + ++ R+Y + ++ R++ PR F +
Sbjct: 54 KTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLL 113
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L E + +A+ V+ M G + + N ++DV K V A +F+ R R
Sbjct: 114 LLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR- 172
Query: 213 RCDSVSYNIIANGWCLI--KRTPMALQ-VLKEMAERGISPTMVTYNTLLKGYFRCHQLRE 269
+ S++I + +C + + ++ VLK M G P + +L+ R + E
Sbjct: 173 --NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSE 230
Query: 270 AWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQ 329
A++ M + V ++ +V GF +GE +K+ +F++M++ G P++ TY +LI+
Sbjct: 231 AFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIK 290
Query: 330 VLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP 389
V A V ++ +G P++ N++I G E A + +EK + P
Sbjct: 291 GFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVP 350
Query: 390 SVQTYNVVIRYFCDAGEIE 408
T+ ++ C +G+ +
Sbjct: 351 DQYTFASILSSLCLSGKFD 369
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 121/257 (47%), Gaps = 12/257 (4%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A++V M+ G P N ++ F+ + + A E F ++ R + ++ +
Sbjct: 127 AIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDIALS 182
Query: 295 GF---GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
F G G++ K V M+ G P+ + ++++ C+ CV A V M+ G
Sbjct: 183 HFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSG 242
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
++N +++++ G SG+ ++AV+ +M + G P++ TY +I+ F D G +++
Sbjct: 243 ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAF 302
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNR 471
++ K+ + P++ N++I + E+ A K+ + R +P ++TF
Sbjct: 303 TVLSKVQSEGLA--PDIVLCNLMIHTYTRLGRFEE---ARKVFTSLEKRKLVPDQYTFAS 357
Query: 472 VLNGLALTGNQEFAKEI 488
+L+ L L+G + I
Sbjct: 358 ILSSLCLSGKFDLVPRI 374
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILD 190
A+T++S+++S P ++ Y G+ A +VF S+ + D +F +IL
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 191 VLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPT 250
LC + + ++ + F D V+ N+++N + I AL+VL M+ + +
Sbjct: 361 SLCLSGKFDLVPRITHGIGTDF--DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALD 418
Query: 251 MVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFD 310
TY L R R A + + + K K +D ++ ++ G+ + +F
Sbjct: 419 CYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
Query: 311 EMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
+ V +Y I+ L + ++ A + +M G PN TY +I GLC
Sbjct: 479 RCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEK 538
Query: 371 DMERAVEYMGRMEKHGIR----PSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
+ E+ + + + G+ Q Y+++ RY D E S+FEK
Sbjct: 539 ETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFR---SVFEK 585
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 143/381 (37%), Gaps = 75/381 (19%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
F + + R + A+ +V M + +++L + +G+P +AV +F M
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM 234
+ GC +L V+Y + G+ +
Sbjct: 275 QIGCSPNL----------------------------------VTYTSLIKGFVDLGMVDE 300
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV- 293
A VL ++ G++P +V N ++ Y R + EA + F ++KRK D T+ +++
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 294 ---------------HGFGV----------------AGEVKKSKRVFDEMVRAGLVPSVA 322
HG G G + +V M
Sbjct: 361 SLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCY 420
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR- 381
TY + LC+ + A+ +++ ++ + + + ++ +I L G AV R
Sbjct: 421 TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRC 480
Query: 382 -MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFV 440
+EK+ + V +Y V I+ A IE+ S+ M +G PN TY +IS +
Sbjct: 481 ILEKYPL--DVVSYTVAIKGLVRAKRIEEAYSLCCDMKEG--GIYPNRRTYRTIISGLCK 536
Query: 441 RKKSEDLVVAGKLLIEMVDRG 461
K++E + K+L E + G
Sbjct: 537 EKETEKV---RKILRECIQEG 554
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 146/345 (42%), Gaps = 40/345 (11%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A +L+ +M P + + IL +A AG A+ + + + G D + +
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAV 416
Query: 189 LDVLCKTKRV-EMAHSLFKTFRGRFRCDSVSYNIIANGW-------------------CL 228
L +LC+ K V E+ + + R R D S +I + C+
Sbjct: 417 LHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCV 476
Query: 229 IKRTPMALQVLKEMAERGI-----------------SPTMVTYNTLLKGYFRCHQLREAW 271
+ T +A V+ AE+G+ ++ YN ++K Y + +A
Sbjct: 477 LSSTTLA-AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F MK + D TY ++ V +++R+ EM+ +G P TY A+I
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
+ + +A+ ++E M G PN Y +I G SG +E A++Y ME+HG++ +
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNH 655
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLIS 436
+I+ + G +E+ +++KM D P++ N ++S
Sbjct: 656 IVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG--PDVAASNSMLS 698
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 152/370 (41%), Gaps = 14/370 (3%)
Query: 140 SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVE 199
S R+ F L + Y AG+ + A +F M + G D +FNT++ +
Sbjct: 298 SPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLS 357
Query: 200 MAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLL 258
A SL K + D+ +YNI+ + AL+ +++ + G+ P VT+ +L
Sbjct: 358 EAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Query: 259 KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLV 318
+ + E EM + ID + ++ + G V ++K +F E + V
Sbjct: 418 HILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF-ERFQLDCV 476
Query: 319 PSVATYNALIQVLCKKDCVQNALLVFEEMVGK----GCVPNLNTYNVVIRGLCHSGDMER 374
S T A+I V +K A VF GK G ++ YNV+I+ + E+
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVF---YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
A+ M+ G P TYN + + +++ + +M D C P TY +
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK--PGCKTYAAM 591
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSR 494
I A +VR L A L M G P + + ++NG A +G E A + RM
Sbjct: 592 I-ASYVRLGL--LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 495 CGHALRHLKL 504
G H+ L
Sbjct: 649 HGVQSNHIVL 658
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 12/308 (3%)
Query: 178 CRQDLNSFNTILDVLCKTKRVEMAHSLF---KTFRGRFRCDSVSYNIIANGWCLIKRTPM 234
C + ++DV + A ++F + G+ R D + YN++ + K
Sbjct: 475 CVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQ-RNDVLEYNVMIKAYGKAKLHEK 533
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
AL + K M +G P TYN+L + + EA EM C+ TY M+
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
+ G + + +++ M + G+ P+ Y +LI + V+ A+ F M G
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
N +I+ G +E A +M+ P V N ++ D G + + S+F
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 415 EKMGD-GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
+ + G+C + + M++ K L A ++ EM + G L +FN+V+
Sbjct: 714 NALREKGTCDVIS-------FATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 474 NGLALTGN 481
A G
Sbjct: 767 ACYAADGQ 774
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 13/262 (4%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L + Y+ G A RV+ M + D+ + N++L + V A S+F R +
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
CD +S+ + + + A++V +EM E G+ ++N ++ Y QL E E
Sbjct: 721 TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCE 780
Query: 273 FFLEM-KKRKCEIDVVTYTTM---VHGFGVAGE-VKKSKRVFDEMVRAGLVPSVATYNAL 327
F EM +RK +D T+ T+ + GV E V + + ++E +AT
Sbjct: 781 LFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNE------AKPLATPAIT 834
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCVPNLN-TYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
+ AL +E+ G +P + YN VI SGD++ A++ RM++ G
Sbjct: 835 ATLFSAMGLYAYALESCQELT-SGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKG 893
Query: 387 IRPSVQTYNVVIRYFCDAGEIE 408
+ P + T ++ + AG +E
Sbjct: 894 LEPDIVTQAYLVGIYGKAGMVE 915
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 55/232 (23%)
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
EMA G+ PT TY L+ Y + ++EA + M +R D VT T+V F +G
Sbjct: 170 EMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSG 229
Query: 301 EVKKSKRVF---------------DEMVRAGLVPS------------------------- 320
E ++ R F D+ + G S
Sbjct: 230 EFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSL 289
Query: 321 ---------------VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRG 365
+T+N LI + K + +A +F EM+ G + T+N +I
Sbjct: 290 HFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT 349
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
G + A + +ME+ GI P +TYN+++ DAG+IE L + K+
Sbjct: 350 CGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKI 401
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 127/316 (40%), Gaps = 39/316 (12%)
Query: 95 ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
A + F + + P + HS S I R R + ++++ RS T F L
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTK-RVEMAHSLFKTFRGRFR 213
+ YA A P + + F M E N ILDVL + ++ A LFK+ R
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH-- 184
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
G+ P +YN L++ + L A++
Sbjct: 185 --------------------------------GVMPNTRSYNLLMQAFCLNDDLSIAYQL 212
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
F +M +R DV +Y ++ GF G+V + + D+M+ G VP LI LC
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCD 268
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
+ EEM+ KG P+ + N +++G C G +E A + + + K+G T
Sbjct: 269 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 328
Query: 394 YNVVIRYFCDAGEIEK 409
+ +VI C+ E EK
Sbjct: 329 WEMVIPLICNEDESEK 344
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
L++A+E F + + +Y ++ F + ++ + ++F +M+ +VP V +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
LIQ C+K V A+ + ++M+ KG VP+ +I GLC G + +Y+ M G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
P N +++ FC G++E+ + E
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVE 315
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 12/213 (5%)
Query: 289 YTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK-KDCVQNALLVFEEM 347
+T ++ + A +K F +M+ P N ++ VL + +Q A +F+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
G +PN +YN++++ C + D+ A + G+M + + P V +Y ++I+ FC G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLIS-AMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
+ + + M + +P+ L MF K K L EM+ +GF P
Sbjct: 242 NGAMELLDDMLNKGF--VPDRTLIGGLCDQGMFDEGK--------KYLEEMISKGFSPHF 291
Query: 467 FTFNRVLNGLALTGNQEFAKEILRMQSRCGHAL 499
N ++ G G E A +++ + + G L
Sbjct: 292 SVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 38/301 (12%)
Query: 174 HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRT 232
H D +S + +++ L K +V+MA +L + + YN I G C R+
Sbjct: 431 HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK-------------- 278
+L++L EM + G+ P+ T N + A + +M+
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 279 -KRKCE----IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA----------------GL 317
K+ CE +D Y V G G G + S D +++ G
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
P V Y+ LI+ LCK A ++F EMV KG P + TYN +I G C G+++R +
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 378 YMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISA 437
+ RM + P V TY +I C +G + + + +M C PN T+ LI
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGK--DCYPNRITFMALIQG 728
Query: 438 M 438
+
Sbjct: 729 L 729
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
D+ A L+ +MR P + L ++ G+ A + + G + +
Sbjct: 524 DFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 187 TILDVLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
+D L K + V+ LF+ C D ++Y+++ C RT A + EM +
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
G+ PT+ TYN+++ G+ + ++ + M + + DV+TYT+++HG +G ++
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 306 KRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
++EM P+ T+ ALIQ LCK AL+ F EM K P+ Y
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 160/417 (38%), Gaps = 94/417 (22%)
Query: 152 ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR 211
IL + G+ +A + + E R + ++ ++ K R++ A LF+ R
Sbjct: 253 ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 212 -FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISP--------------------- 249
D Y+++ G C K MAL + E+ GI P
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRI 372
Query: 250 ------------TMVTYNTLLKGYFRCHQLREAWEF------------------FLEMKK 279
M+ Y +L +G+ R + EA+ F L+
Sbjct: 373 TEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHN 432
Query: 280 RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQN 339
+ D + + +++ A +V + + ++V+ GL+P YN +I+ +CK+ +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 340 ALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIR 399
+L + EM G P+ T N + L D A++ + +M +G P ++ +++
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 400 YFCD--------------AGE---------------------IEKGLSMFEKM-GDGSCS 423
C+ AGE +++GL +F + +G C
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC- 611
Query: 424 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
P++ Y+VLI A+ K+ + A L EMV +G P T+N +++G G
Sbjct: 612 --PDVIAYHVLIKALC---KACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/480 (19%), Positives = 176/480 (36%), Gaps = 97/480 (20%)
Query: 77 TPELVDEVLKRLWNHGPK---ALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWT 133
+PEL +V++ + N + A FF + Y + + I +R R +
Sbjct: 68 SPELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKA 127
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHG-CRQDLNSFNTILD-- 190
LV + + R +P AF AG A VF + E G C + ++N +L+
Sbjct: 128 LVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI 187
Query: 191 -----------------------------------VLCKTKRVEMAHSLFKTFRGRFRCD 215
V C T + E A S+F R D
Sbjct: 188 SKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLD 247
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
I+ +C + A ++++ + ER I TY L+ G+ + ++ +A++ F
Sbjct: 248 EHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFE 307
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS--------------- 320
+M++ D+ Y ++ G +++ + ++ E+ R+G+ P
Sbjct: 308 KMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEES 367
Query: 321 ------------------VATYNALIQVLCKKDCVQNALLVFEEMVG------------- 349
+ Y +L + + D V A + ++G
Sbjct: 368 ELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKL 427
Query: 350 -----KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
K +P+ ++ ++VI L + ++ AV + + ++G+ P YN +I C
Sbjct: 428 LKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKE 487
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G E+ L + +M D P+ T N + + R D V A LL +M GF P
Sbjct: 488 GRSEESLKLLGEMKDAGVE--PSQFTLNCIYGCLAERC---DFVGALDLLKKMRFYGFEP 542
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS- 203
P A+ +L + A + A +F M G + + ++N+++D CK ++ S
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 204 LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
+ + + D ++Y + +G C R A+ EM + P +T+ L++G +
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
C EA +F EM++++ E D Y ++V F + + +F EMV G P
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 324 YNALIQV 330
N ++ V
Sbjct: 792 RNYMLAV 798
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 79/132 (59%)
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
+++YN + +G+C R A ++L MA +G SP +VT++TL+ GY + ++ E F
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
EM +R + VTYTT++HGF G++ ++ + +EM+ G+ P T++ ++ LC K
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 336 CVQNALLVFEEM 347
++ A + E++
Sbjct: 130 ELRKAFAILEDL 141
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
+TY +M+ GF V +KR+ D M G P V T++ LI CK V N + +F
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG 405
EM +G V N TY +I G C GD++ A + + M G+ P T++ ++ C
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 406 EIEKGLSMFEKM 417
E+ K ++ E +
Sbjct: 130 ELRKAFAILEDL 141
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%)
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M I PT +TYN+++ G+ + ++ +A M + C DVVT++T+++G+ A
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
V +F EM R G+V + TY LI C+ + A + EM+ G P+ T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 362 VIRGLCHSGDMERAVEYMGRMEK 384
++ GLC ++ +A + ++K
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
M+R + P+ TYN++I CK+D V +A + + M KGC P++ T++ +I G C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
++ +E M + GI + TY +I FC G+++ + +M SC P+ T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM--ISCGVAPDYITF 118
Query: 432 NVLISAMFVRKK 443
+ +++ + +K+
Sbjct: 119 HCMLAGLCSKKE 130
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKE 241
++N+++D CK RV+ A + + + C D V+++ + NG+C KR +++ E
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M RGI VTY TL+ G+ + L A + EM D +T+ M+ G E
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 302 VKKSKRVFDEMVRA 315
++K+ + +++ ++
Sbjct: 131 LRKAFAILEDLQKS 144
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
PT + + + + + A R+ SM GC D+ +F+T+++ CK KRV+ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 205 F-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
F + R ++V+Y + +G+C + A +L EM G++P +T++ +L G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 264 CHQLREAWEFFLEMKKRK 281
+LR+A+ +++K +
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 382 MEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVR 441
M + I P+ TYN +I FC ++ M + M CS P++ T++ LI+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS--PDVVTFSTLINGYCKA 58
Query: 442 KKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
K+ ++ ++ EM RG + T+ +++G G+ + A+++L CG A
Sbjct: 59 KRVDN---GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 172/388 (44%), Gaps = 17/388 (4%)
Query: 112 PSGFEHAIDIAARMRDYTTAWTLVSRMRSLR-RGPTPRAFAILAERYAAAGKPHRAVRVF 170
P A+D A + + +A + + +R P + + L + +P +A +F
Sbjct: 108 PKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLF 167
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSYNIIANGWCL 228
M G + ++ + +++ V K++ ++ A S + + C D ++ ++ + C
Sbjct: 168 EVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCK 227
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI-DVV 287
+ R + ++ EM+ G+ + VTYNT++ GY + E +M + + DV
Sbjct: 228 LGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVC 287
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
T +++ +G ++K + + G+ P + T+N LI K + V + M
Sbjct: 288 TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM 347
Query: 348 VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
+ TYN+VI +G +E+ + +M+ G++P+ TY ++ + AG +
Sbjct: 348 EKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLV 407
Query: 408 EKGLSMFEKMGDGSCSCLPNLDT--YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPR 465
K S+ ++ + LDT +N +I+A ++ DL +L I+M +R P
Sbjct: 408 VKIDSVLRQIVNSDVV----LDTPFFNCIINAY---GQAGDLATMKELYIQMEERKCKPD 460
Query: 466 KFTFNRVLNGLALTG----NQEFAKEIL 489
K TF ++ G QE K+++
Sbjct: 461 KITFATMIKTYTAHGIFDAVQELEKQMI 488
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 147/361 (40%), Gaps = 9/361 (2%)
Query: 79 ELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRM 138
E +DE +K N AL+ F L + Y + + + A L M
Sbjct: 113 EALDEAIKE--NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVM 170
Query: 139 RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHE-HGCRQDLNSFNTILDVLCKTKR 197
S PT + L Y + +A M C+ D+ +F ++ CK R
Sbjct: 171 LSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR 230
Query: 198 VEMAHSLF--KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS-PTMVTY 254
++ S+ ++ G C +V+YN I +G+ VL +M E G S P + T
Sbjct: 231 FDLVKSIVLEMSYLG-VGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTL 289
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
N+++ Y +R+ ++ + + D+ T+ ++ FG AG KK V D M +
Sbjct: 290 NSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEK 349
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMER 374
+ TYN +I+ K ++ VF +M +G PN TY ++ +G + +
Sbjct: 350 RFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVK 409
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
+ ++ + +N +I + AG++ ++ +M + C P+ T+ +
Sbjct: 410 IDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCK--PDKITFATM 467
Query: 435 I 435
I
Sbjct: 468 I 468
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 79/183 (43%), Gaps = 1/183 (0%)
Query: 136 SRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKT 195
SR + + P F IL + AG + V M + ++N +++ K
Sbjct: 310 SRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKA 369
Query: 196 KRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTY 254
R+E +F+ + + + +S++Y + N + VL+++ + +
Sbjct: 370 GRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFF 429
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
N ++ Y + L E +++M++RKC+ D +T+ TM+ + G + + +M+
Sbjct: 430 NCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMIS 489
Query: 315 AGL 317
+ +
Sbjct: 490 SDI 492
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 157/344 (45%), Gaps = 16/344 (4%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSVSY 219
+P +A +F M GC + + ++ ++ R + A +L + + C D +Y
Sbjct: 165 QPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTY 224
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM-K 278
+I+ + + +L +M +GI P +TYNTL+ Y + E ++M
Sbjct: 225 SILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLG 284
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+ C+ D T + + FG G+++ + +++ +G+ P++ T+N L+ K +
Sbjct: 285 EDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYK 344
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR-MEKHGIRPSVQTYNVV 397
V E M + TYNVVI +GD+ + +EY+ R M+ I PS T +
Sbjct: 345 KMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL-KQMEYLFRLMQSERIFPSCVTLCSL 403
Query: 398 IRYFCDAGEIEK--GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLI 455
+R + A + +K G+ F + D +L +N L+ A +K ++ K ++
Sbjct: 404 VRAYGRASKADKIGGVLRFIENSDIRL----DLVFFNCLVDAYGRMEKFAEM----KGVL 455
Query: 456 EMVD-RGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGHA 498
E+++ +GF P K T+ ++ ++G KE+ + G A
Sbjct: 456 ELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEA 499
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 137/338 (40%), Gaps = 32/338 (9%)
Query: 78 PELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSR 137
PE E+ + + N G + H Y S + +R + A+TL+ R
Sbjct: 166 PEKAHELFQEMINEGC--------VVNHEVYTALVSAY-------SRSGRFDAAFTLLER 210
Query: 138 MRSLRR-GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTK 196
M+S P ++IL + + + + M G R + ++NT++D K K
Sbjct: 211 MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAK 270
Query: 197 R-VEMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVT 253
VEM +L + G C DS + N + + M ++ GI P + T
Sbjct: 271 MFVEMESTLIQML-GEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 254 YNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
+N LL Y + ++ M+K +VTY ++ FG AG++K+ + +F M
Sbjct: 330 FNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQ 389
Query: 314 RAGLVPSVATYNALIQVL---CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
+ PS T +L++ K D + L E +L +N ++ G
Sbjct: 390 SERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE---NSDIRLDLVFFNCLVDAY---G 443
Query: 371 DMERAVEYMG---RMEKHGIRPSVQTYNVVIRYFCDAG 405
ME+ E G MEK G +P TY +++ + +G
Sbjct: 444 RMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 10/220 (4%)
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL--VPSVATYN 325
REA + +E KK ++ T +H A + + +VF E++R L P+V Y
Sbjct: 96 REATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVF-ELLREQLWYKPNVGIYV 154
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME-K 384
LI +L K + A +F+EM+ +GCV N Y ++ SG + A + RM+
Sbjct: 155 KLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSS 214
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKS 444
H +P V TY+++I+ F +K + M PN TYN LI A K+
Sbjct: 215 HNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIR--PNTITYNTLIDAY---GKA 269
Query: 445 EDLVVAGKLLIEMV-DRGFLPRKFTFNRVLNGLALTGNQE 483
+ V LI+M+ + P +T N L G E
Sbjct: 270 KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 40/245 (16%)
Query: 231 RTPMALQVLKEMAER-GISPTMVTYNTLLKGYFRCHQLREAWEFFLEM------------ 277
R A+QV + + E+ P + Y L+ +C Q +A E F EM
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 278 ------------------------KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
C+ DV TY+ ++ F K + + +M
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-GCVPNLNTYNVVIRGLCHSGDM 372
R G+ P+ TYN LI K +M+G+ C P+ T N +R +G +
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
E + + GI P+++T+N+++ + +G +K ++ E M S + TYN
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSW--TIVTYN 366
Query: 433 VLISA 437
V+I A
Sbjct: 367 VVIDA 371
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 178/445 (40%), Gaps = 30/445 (6%)
Query: 72 SPFRWTPELVDEVLKRLWN--HGPKALQFFKHLDRHPTYI-HSPSGFEHAIDIAARMRDY 128
S + L++ +L R N +AL FF H H + H + I I + R
Sbjct: 71 SSIDLSDSLIETILLRFKNPETAKQALSFF-HWSSHTRNLRHGIKSYALTIHILVKARLL 129
Query: 129 TTAWTLVSRMRSLRRGP------------------TPRAFAILAERYAAAGKPHRAVRVF 170
A L+ SL P TP F +L + YA VF
Sbjct: 130 IDARALIES--SLLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVF 187
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLI 229
+ + G + + NT++ K+K ++ +++ R + ++ I+ C
Sbjct: 188 KRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKE 247
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
R + +L + + P+++ +L+ ++ E+ + + +D + Y
Sbjct: 248 GRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGY 307
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
+ +V+ G++ +++VFDEM++ G + Y ++V C+K V+ A + EM
Sbjct: 308 SIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEE 367
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
G P T+N +I G G E+ +EY M G+ PS +N +++ + +
Sbjct: 368 SGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNR 427
Query: 410 GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTF 469
+ K D +P+ TY+ LI + D+ A KL EM R P F
Sbjct: 428 ANEILTKSIDK--GFVPDEHTYSHLIRGFI---EGNDIDQALKLFYEMEYRKMSPGFEVF 482
Query: 470 NRVLNGLALTGNQEFAKEILRMQSR 494
++ GL G E ++ L++ +
Sbjct: 483 RSLIVGLCTCGKVEAGEKYLKIMKK 507
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 41/250 (16%)
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
RG F +S Y + C A ++L EM E G+SP T+N L+ G+ R
Sbjct: 333 RG-FSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARF---- 387
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
WE E CE+ MV GL+PS + +N ++
Sbjct: 388 -GWE---EKGLEYCEV---------------------------MVTRGLMPSCSAFNEMV 416
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIR 388
+ + K + V A + + + KG VP+ +TY+ +IRG D+++A++ ME +
Sbjct: 417 KSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476
Query: 389 PSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
P + + +I C G++E G + M PN D Y+ LI A +K D
Sbjct: 477 PGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIE--PNADIYDALIKAF---QKIGDKT 531
Query: 449 VAGKLLIEMV 458
A ++ EM+
Sbjct: 532 NADRVYNEMI 541
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 5/239 (2%)
Query: 114 GFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFA--ILAERYAAAGKPHRAVRVFI 171
G+ + A+ D +A + M L+RG + +F + G A R+
Sbjct: 306 GYSIVVYAKAKEGDLVSARKVFDEM--LQRGFSANSFVYTVFVRVCCEKGDVKEAERLLS 363
Query: 172 SMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVS-YNIIANGWCLIK 230
M E G +FN ++ + E + R S S +N + I+
Sbjct: 364 EMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIE 423
Query: 231 RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYT 290
A ++L + ++G P TY+ L++G+ + + +A + F EM+ RK +
Sbjct: 424 NVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFR 483
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
+++ G G+V+ ++ M + + P+ Y+ALI+ K NA V+ EM+
Sbjct: 484 SLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
VF + G SV T N LI K ++E + K PN T ++I+ LC
Sbjct: 186 VFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLC 245
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
G ++ V+ + R+ PSV ++ + IE+ +S+ +++ + N
Sbjct: 246 KEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL------LMKN 299
Query: 428 L--DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
+ DT I ++ + K DLV A K+ EM+ RGF F + + G+ + A
Sbjct: 300 MVVDTIGYSI-VVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEA 358
Query: 486 KEILRMQSRCG 496
+ +L G
Sbjct: 359 ERLLSEMEESG 369
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 37/260 (14%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF--RC 214
Y AG +A+ F +M +GC++ + SFN L VL + ++
Sbjct: 116 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 175
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF---RC------- 264
D+VS+NI +C + A ++EM + G++P +VTY TL+ + RC
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 265 ----------------------HQLREAW---EFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
R AW + L M K + E D +TY ++ GF +A
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
++RV+ M G P++ Y +I LCK A + ++ + K PNL+T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 360 NVVIRGLCHSGDMERAVEYM 379
++++GL G +++A M
Sbjct: 356 EMLLKGLVKKGQLDQAKSIM 375
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 12/267 (4%)
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM-KKRKCEIDVVTYT 290
T AL M G ++ ++N L+ L WEF + K +ID V++
Sbjct: 122 TKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFN 181
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD--CVQNALLVFEEMV 348
+ F G + + EM ++GL P V TY LI L K + + N L + MV
Sbjct: 182 IAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGL--WNLMV 239
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
KGC PNL T+NV I+ L + A + + M K + P TYN+VI+ F A +
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPD 299
Query: 409 KGLSMFEKM-GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKF 467
++ M G G PNL Y +I + K+ + +A + + + + + P
Sbjct: 300 MAERVYTAMHGKGYK---PNLKIYQTMIHYLC---KAGNFDLAYTMCKDCMRKKWYPNLD 353
Query: 468 TFNRVLNGLALTGNQEFAKEILRMQSR 494
T +L GL G + AK I+ + R
Sbjct: 354 TVEMLLKGLVKKGQLDQAKSIMELVHR 380
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 190 DVLCKTKRVEMAHS---LFKTFRG--RFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
++L +R +M +F+ +G RF+ D+ SYNI +G+ AL + KEM E
Sbjct: 217 ELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKE 276
Query: 245 R------GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
R P + TYN+L+ + ++A + E+K E D TY ++ G
Sbjct: 277 RSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCK 336
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
+ + + R++ EM G VP YN L+ K V A +FE+MV +G + T
Sbjct: 337 SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWT 396
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
YN++I GL +G E ++K G T+++V C G++E + + E+M
Sbjct: 397 YNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 25/283 (8%)
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-------FRCDSVSYNIIA 223
I +H GC DL++ A SLFK + R F D +YN +
Sbjct: 253 ICIHGFGCWGDLDA----------------ALSLFKEMKERSSVYGSSFGPDICTYNSLI 296
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
+ CL + AL V E+ G P TY L++G + +++ +A + EM+
Sbjct: 297 HVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV 356
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
D + Y ++ G A +V ++ ++F++MV+ G+ S TYN LI L + + +
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCD 403
F ++ KG + T+++V LC G +E AV+ + ME G + T + ++ F
Sbjct: 417 FCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHK 476
Query: 404 AGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
G + + + + +G + +PN+ +N + A R +S+D
Sbjct: 477 QGRWDWKEKLMKHIREG--NLVPNVLRWNAGVEASLKRPQSKD 517
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 169/425 (39%), Gaps = 69/425 (16%)
Query: 68 ALENSPFRWTPELVDEVLKRLWNHGPKALQFFKH-LDRHPTYIHSPSGFEHAIDIAARMR 126
+L+ + + +V ++L+R K L FF+ P Y HS + + R
Sbjct: 47 SLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTG 106
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFN 186
L+ M+ IL + +GK A+ V M E G + + ++
Sbjct: 107 LLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYD 166
Query: 187 TILDVLCKTKRVEMAHS-LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
++L L K + +A S LFK S +++ G +I
Sbjct: 167 SVLIALVKKHELRLALSILFKLLEA-----SDNHSDDDTGRVIIV--------------- 206
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKK-RKCEIDVVTYTTMVHGFGVAGEVKK 304
P V N LL G R E F ++K ++ + D +Y +HGFG G++
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 305 SKRVFDEMVRAGLV------PSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
+ +F EM V P + TYN+LI VLC ++AL+V++E+ G P+ +T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
Y ++I+G C S M+ A+ G M+ +G P YN ++
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL-------------------- 366
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
DG+ + RK +E A +L +MV G +T+N +++GL
Sbjct: 367 DGT----------------LKARKVTE----ACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 479 TGNQE 483
G E
Sbjct: 407 NGRAE 411
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCD--SVSYNIIANGWCLIKRTPMALQV 238
D++ NT L + + +A LF+ F G D S +YN + + + A V
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
L +M E + + TYN +++G + + A + K+ +D+V Y T+++ G
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
A + ++ ++FD M G+ P V +YN +I+V K ++ A + M+ GC+PN
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYT--TMVHGFGVAGEVKKSKRVFDEM 312
NT L Y L A + F E+ D+ +YT +M+ F G + ++ V D+M
Sbjct: 598 NTFLSIYLSKGDLSLACKLF-EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQM 656
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
+ATYN +IQ L K A V + + +G ++ YN +I L + +
Sbjct: 657 FENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRL 716
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
+ A + M+ +GI P V +YN +I AG++++ + M D CLPN T
Sbjct: 717 DEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA--GCLPNHVTDT 774
Query: 433 VL 434
+L
Sbjct: 775 IL 776
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 176/445 (39%), Gaps = 41/445 (9%)
Query: 89 WNHGPKALQFFKHLDRHPTYIHSPSGFE--------HAIDIAARMRDYTTAWTLVSRMRS 140
W AL FK + + S G + H + + + +D W ++
Sbjct: 261 WGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVW---DELKV 317
Query: 141 LRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEM 200
P + IL + + + A+R++ M +G D +N +LD K ++V
Sbjct: 318 SGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 201 AHSLF-KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
A LF K + R +YNI+ +G R + ++ ++G +T++ +
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGL 437
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
R +L A + EM+ R +D+VT ++++ GF G +++ + LVP
Sbjct: 438 QLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Query: 320 SVATYNALIQVLCK------KDCV-----QNALLVFEEMVG--------KGCVPNLN--- 357
+V +NA ++ K KD + + L MVG + P +
Sbjct: 498 NVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPW 557
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP---SVQTYNVVIRYFCDAGEIEKGLSMF 414
+ + + L H + + + + R ++ +P V N + + G++ +F
Sbjct: 558 SSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLF 617
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
E + L + TYN ++S+ FV+K A +L +M + T+N ++
Sbjct: 618 EIFNGMGVTDLTSY-TYNSMMSS-FVKKGY--FQTARGVLDQMFENFCAADIATYNVIIQ 673
Query: 475 GLALTGNQEFAKEILRMQSRCGHAL 499
GL G + A +L ++ G L
Sbjct: 674 GLGKMGRADLASAVLDRLTKQGGYL 698
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA-TYNALIQVLCKKDCVQNALLV 343
DV T + + G++ + ++F+ G+ + TYN+++ KK Q A V
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 344 FEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCD 403
++M C ++ TYNV+I+GL G + A + R+ K G + YN +I
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 404 AGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFL 463
A +++ +F+ M + P++ +YN +I V K+ L A K L M+D G L
Sbjct: 713 ATRLDEATQLFDHMKSNGIN--PDVVSYNTMIE---VNSKAGKLKEAYKYLKAMLDAGCL 767
Query: 464 PRKFT 468
P T
Sbjct: 768 PNHVT 772
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSF--NTILDVLCKTKRVEMAHSLF-KTFRGRFR 213
Y + G A ++F + G DL S+ N+++ K + A + + F
Sbjct: 604 YLSKGDLSLACKLFEIFNGMGV-TDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCA 662
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
D +YN+I G + R +A VL + ++G +V YNTL+ + +L EA +
Sbjct: 663 ADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQL 722
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
F MK DVV+Y TM+ AG++K++ + M+ AG +P+ T
Sbjct: 723 FDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 146 TPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF 205
T + + + G A V M E+ C D+ ++N I+ L K R ++A ++
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 206 K--TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
T +G + D V YN + N R A Q+ M GI+P +V+YNT+++ +
Sbjct: 689 DRLTKQGGY-LDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
+L+EA+++ M C + VT T +
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 163/418 (38%), Gaps = 67/418 (16%)
Query: 60 SDPGTLAEALENSPFRWTPELVDEVLKRL---WNHGPKALQFFKHLDRHPTYIHSPSGFE 116
S L L ++ F+ T E +V W P F HP + H+ +
Sbjct: 59 SPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWR--PVHRFFLYSQTHHPDFTHTSTTSN 116
Query: 117 HAIDIAARMRDYTTAWTLVSRMRSLRRG-PTPRAFAILAERYAAAGKPHRAVRVFISMHE 175
+ I R+ W L + +RG + F I+ + A+A + + V F M+
Sbjct: 117 KMLAIIGNSRNMDLFWELAQEIG--KRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNG 174
Query: 176 HGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMA 235
G ++ + N ++ LCK K VE A +F + + D ++Y + G+C + A
Sbjct: 175 FGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEA 234
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE-FFLEMKKRKCEIDVVTYTTMVH 294
++ M + G + +++ + +Q EA + F++ + KR ++D Y M+
Sbjct: 235 AKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMID 294
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLV-------------------------------PSVAT 323
G + +++VFDEM G+ P ++
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISI 354
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY-----------------------N 360
Y+ LI+ L K A VF +M+ +GC P ++TY
Sbjct: 355 YHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFDT 414
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
+ + G+ +G +Y+ R K G+ Y+ + Y+ + E+G+ MFE+M
Sbjct: 415 IFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFLHYYSN----EEGVVMFEEMA 468
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 6/227 (2%)
Query: 250 TMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
T T N +L + WE E+ KR ++ T+ ++ A E+KK F
Sbjct: 111 TSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGL-VNDKTFRIVLKTLASARELKKCVNYF 169
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
M G + +V T N ++ LCK+ V+ A VF ++ + P+ TY +I+G C
Sbjct: 170 HLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDV 228
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
GD+ A + M G ++ ++ + ++ +F M L
Sbjct: 229 GDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDG-G 287
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
Y V+I + K+ + +A K+ EM +RG T+ ++ GL
Sbjct: 288 FYRVMIDWLC---KNGRIDMARKVFDEMRERGVYVDNLTWASLIYGL 331
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 138 MRSLRRGPTPRAFA-ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTK 196
M S R G F ++ + G+ A +VF M E G D ++ +++ L +
Sbjct: 276 MVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKR 335
Query: 197 RVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
RV A+ L + G D Y+ + G IKR A +V ++M +RG P M TY
Sbjct: 336 RVVEAYGLVE---GVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLM 392
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM-VHGFGVAGEVKKSKRVFDEMVRA 315
LL+G+ L + RK +V + T+ V G AG+ ++ + + ++
Sbjct: 393 LLQGH-------------LGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKR 439
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK 350
GL Y+ + ++ V ++FEEM K
Sbjct: 440 GLEVPRFDYSKFLHYYSNEEGV----VMFEEMAKK 470
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 17/285 (5%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIA----ARMRDYTTAWTLVSRMRSLRRGPTPRA 149
KAL +K + + T SP +A+++ A+ + ++ L+ ++ + T
Sbjct: 48 KALAIYKSVSNNST---SPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETF 104
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ L Y A A+++F M + G + + SFN +L + E LF F
Sbjct: 105 LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFP 164
Query: 210 GRFRC---DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
R+ D +SY ++ +C + A++++++M +G+ T++ + T+L ++
Sbjct: 165 QRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL 224
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV-KKSKRVFDEMVRAGLVPSVATYN 325
+ EA ++EM + C++D Y V A E ++ K + +EM GL P +YN
Sbjct: 225 VDEAESLWIEMVNKGCDLDNTVYN--VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYN 282
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
L+ C K + A V+E + PN T+ +I LC +G
Sbjct: 283 YLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCING 323
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI--DVVTYTTM 292
A+++ +EM + G T+V++N LL + F E +R I D ++Y +
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 293 VHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
+ + +G+ +K+ + +M G+ ++ + ++ L K V A ++ EMV KGC
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLS 412
+ YNV + ER E M M G++P +YN ++ +C G + +
Sbjct: 241 DLDNTVYNVRLMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKK 299
Query: 413 MFEKMGDGSCSCLPNLDTYNVLI 435
++E + PN T+ LI
Sbjct: 300 VYEGLEQ------PNAATFRTLI 316
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 14/260 (5%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR-EAWEFFLEMKKRKCEIDVVTY-TTM 292
AL + K ++ SP Y L R E +E K +I T+ +T+
Sbjct: 49 ALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTL 108
Query: 293 VHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-- 350
+ +G A + ++F+EM + G +V ++NAL+ D + +F+E +
Sbjct: 109 IRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYN 168
Query: 351 GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
P+ +Y ++I+ C SG E+A+E M ME G+ ++ + ++ G +++
Sbjct: 169 NITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEA 228
Query: 411 LSMFEKMGDGSCSCLPNLDT--YNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFT 468
S++ +M + C +LD YNV + M K+S + V +L+ EM G P +
Sbjct: 229 ESLWIEMVNKGC----DLDNTVYNVRL--MNAAKESPERV--KELMEEMSSVGLKPDTVS 280
Query: 469 FNRVLNGLALTGNQEFAKEI 488
+N ++ + G AK++
Sbjct: 281 YNYLMTAYCVKGMMSEAKKV 300
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 10/316 (3%)
Query: 178 CRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPM--- 234
CR D +F+ ++ L + K +L F R D S A+ L + M
Sbjct: 76 CRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIEN-RPDLKSERFAAHAIVLYAQANMLDH 134
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKR-KCEIDVVTYTTMV 293
+L+V +++ + IS T+ + N LL +EA ++EM K E D+ TY M+
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 294 HGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV 353
F +G S + EM R G+ P+ +++ +I +D V M +G
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 354 PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM 413
++TYN+ I+ LC + A + M G++P+ TY+ +I FC+ + E+ +
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 414 FEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
F+ M + C P+ + Y LI + K D A L E +++ ++P ++
Sbjct: 315 FKIMVNRGCK--PDSECYFTLI---YYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLV 369
Query: 474 NGLALTGNQEFAKEIL 489
NGLA E AKE++
Sbjct: 370 NGLAKDSKVEEAKELI 385
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF--RC 214
YA A ++RVF + + + + S N +L K + A ++ +
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D +YN + +C + ++ EM +GI P ++ ++ G++ + E +
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
MK R I V TY + + K++K + D M+ AG+ P+ TY+ LI C +
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR-MEKHGIRPSVQT 393
D + A +F+ MV +GC P+ Y +I LC GD E A+ MEK+ + PS
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV-PSFSI 364
Query: 394 YNVVIRYFCDAGEIEKG 410
++ ++E+
Sbjct: 365 MKSLVNGLAKDSKVEEA 381
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 204 LFKTFR-GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
+FK R D+ YNII +G C + A + + G+ P + TYN ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
R L A + + EM +R D +TY +M+HG ++ ++++V S +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM 382
T+N LI CK V++ + +F EM +G V N+ TY +I G GD A++ M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+G+ S T+ ++ C E+ K ++M
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 138 MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKR 197
MR + I+ AGK A +F ++ G + D+ ++N ++ R
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR 63
Query: 198 VEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTL 257
E ++ + R D+++YN + +G C K+ +A R +S + T+NTL
Sbjct: 64 AEKLYA--EMIRRGLVPDTITYNSMIHGLC--KQNKLA-------QARKVSKSCSTFNTL 112
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
+ GY + ++++ F EM +R +V+TYTT++HGF G+ + +F EMV G+
Sbjct: 113 INGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Query: 318 VPSVATYNALIQVLCKKDCVQNAL 341
S T+ ++ LC + ++ A+
Sbjct: 173 YSSSITFRDILPQLCSRKELRKAV 196
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+ K M E + YN ++ G + + EA F + + DV TY M+ F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
G ++++++ EM+R GLVP TYN++I LCK++ + A V K C +
Sbjct: 60 SLG---RAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA-----RKVSKSC----S 107
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
T+N +I G C + ++ + M + GI +V TY +I F G+ L +F++M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 45/281 (16%)
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIK 230
+++ E R+D+ S+ ++D L K +V+ A LF R + +S+N + G+
Sbjct: 191 MNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER---NIISWNAMITGYAQNN 247
Query: 231 RTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYT 290
R A Q+ + M ER + ++NT++ G+ R ++ +A F R E +V+++T
Sbjct: 248 RIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLF----DRMPEKNVISWT 299
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLV-PSVATYNALIQ-------------------- 329
TM+ G+ E +++ VF +M+R G V P+V TY +++
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 330 -VLCKKDCVQNALL----------VFEEMVGKG--CVPNLNTYNVVIRGLCHSGDMERAV 376
V K + V +ALL +M G C +L ++N +I H G + A+
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 377 EYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
E +M KHG +PS TY ++ AG +EKG+ F+ +
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 165 RAVRVFI---SMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNI 221
R+V++F S++ R + ++ LCK ++ A LF R D V++
Sbjct: 26 RSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER---DVVTWTH 82
Query: 222 IANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRK 281
+ G+ + A ++ + R +VT+ ++ GY R QL A F EM +R
Sbjct: 83 VITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER- 138
Query: 282 CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL 341
+VV++ TM+ G+ +G + K+ +FDEM +V ++N++++ L ++ + A+
Sbjct: 139 ---NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAM 191
Query: 342 LVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
+FE M + V ++ ++ GL +G ++ A M + I ++N +I +
Sbjct: 192 NLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGY 243
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLD--TYNVLISAMFVRKK 443
I++ +F+ M P D ++N +I+ F+R +
Sbjct: 244 AQNNRIDEADQLFQVM--------PERDFASWNTMITG-FIRNR 278
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 148/359 (41%), Gaps = 29/359 (8%)
Query: 141 LRRGPTPRAFA--ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV---LCKT 195
L R +P F + YA + P A+ VF M D SF +L C
Sbjct: 97 LNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 156
Query: 196 KRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
+ H LF + D N + N + +A +VL M R V++N
Sbjct: 157 EEGRQIHGLF--IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWN 210
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
+LL Y + EA F EM++R E ++ M+ G+ AG VK++K VFD M
Sbjct: 211 SLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMP-- 264
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV-PNLNTYNVVIRGLCHSGDMER 374
V V ++NA++ C L VF +M+ P+ T V+ G + +
Sbjct: 265 --VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQ 322
Query: 375 AVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVL 434
++KHGI ++ + G+I+K L +F + ++ T+N +
Sbjct: 323 GEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR------ATSKRDVSTWNSI 376
Query: 435 ISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQS 493
IS + V +D A ++ EMV GF P TF VL+ G + A+++ M S
Sbjct: 377 ISDLSVHGLGKD---ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMS 432
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 13/275 (4%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L Y G A +F M E +++ S+N ++ V+ A +F + R
Sbjct: 212 LLSAYLEKGLVDEARALFDEMEE----RNVESWNFMISGYAAAGLVKEAKEVFDSMPVR- 266
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGIS-PTMVTYNTLLKGYFRCHQLREAW 271
D VS+N + + + L+V +M + P T ++L L +
Sbjct: 267 --DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
+ + K EI+ T +V + G++ K+ VF RA V+T+N++I L
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF----RATSKRDVSTWNSIISDL 380
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK-HGIRPS 390
++AL +F EMV +G PN T+ V+ H G +++A + M + + P+
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPT 440
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
++ Y ++ G+IE+ + ++ S L
Sbjct: 441 IEHYGCMVDLLGRMGKIEEAEELVNEIPADEASIL 475
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 141/324 (43%), Gaps = 9/324 (2%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEH-G 177
IDI M +++ A L ++S F+I+ Y AG A V M E
Sbjct: 565 IDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKD 624
Query: 178 CRQDLNSFNTILDVLCKTK-RVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMA- 235
D+ F +L + K + ++ H ++ + + YN + N C + P+
Sbjct: 625 IVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN--CCARALPLDE 682
Query: 236 -LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
+EM G +P VT+N LL Y + ++ E FL + KR +DV++Y T++
Sbjct: 683 LSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRHGVVDVISYNTIIA 741
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
+G + M G S+ YN L+ K ++ + + M P
Sbjct: 742 AYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGP 801
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+ TYN++I G ++ + + +++ G+ P + +YN +I+ + G +E+ + +
Sbjct: 802 DHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLV 861
Query: 415 EKMGDGSCSCLPNLDTYNVLISAM 438
++M + +P+ TY L++A+
Sbjct: 862 KEM--RGRNIIPDKVTYTNLVTAL 883
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%)
Query: 170 FISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLI 229
F M +G + +FN +LDV K K + + LF + D +SYN I +
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKN 746
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
K +K M G S ++ YNTLL Y + Q+ + MKK D TY
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
M++ +G G + + V E+ +GL P + +YN LI+ V+ A+ + +EM G
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
+ +P+ TY ++ L + + A+++ M++ GI
Sbjct: 867 RNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 4/210 (1%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHG--CRQDLNSFNTILDVLCKTKRVEMAH 202
P +L Y A F M + G C +S TI L + E
Sbjct: 243 PNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVI 302
Query: 203 SLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYF 262
L K R R + ++ + ++ N + + +A +L M G SP ++ YNTL+ GY
Sbjct: 303 DLMKQDRVRLKLEN--WLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360
Query: 263 RCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVA 322
+ ++ A F + E D +Y +M+ G+G A +++K + E+ R G P+
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420
Query: 323 TYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
LI + K A+ E+M G GC
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGC 450
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 140/329 (42%), Gaps = 7/329 (2%)
Query: 84 VLKRLWN-HGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLR 142
+LKRL + A++FF + + + + + + + R ++ A L+ +
Sbjct: 145 ILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFH 204
Query: 143 R-GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMA 201
+ + F + G A + F M E G R ++ + ++ + K VE A
Sbjct: 205 EFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEA 264
Query: 202 HSLFKTFRGRFR--CDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLK 259
F R +F C+S +Y+ + + ++ A +V+ M + + + + +L
Sbjct: 265 EFAFSHMR-KFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLN 322
Query: 260 GYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP 319
Y + ++ A + M+ +++ Y T++ G+G +++ ++ +F + GL P
Sbjct: 323 AYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEP 382
Query: 320 SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
+Y ++I+ + D + A ++E+ G PN +I GD + A++ +
Sbjct: 383 DETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTI 442
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAGEIE 408
M G + S ++++ + G+I+
Sbjct: 443 EDMTGIGCQYS-SILGIILQAYEKVGKID 470
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 144/329 (43%), Gaps = 11/329 (3%)
Query: 113 SGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAI--LAERYAAAGKPHRAVRVF 170
+ + I+ R +Y A ++ R G P +F + L A G A++
Sbjct: 385 TSYRSMIEGWGRADNYEEAKHYYQELK--RCGYKPNSFNLFTLINLQAKYGDRDGAIKTI 442
Query: 171 ISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK-TFRGRFRCDSVSYNIIANGWCLI 229
M GC Q + IL K ++++ + K +F R + S++ + +
Sbjct: 443 EDMTGIGC-QYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKH 501
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
L +L+E R + Y+ L+ QL +A + + + EI++
Sbjct: 502 GMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT 561
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM-V 348
+TM+ + V GE ++++++ + +G+V ++ ++++ K ++ A V E M
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 349 GKGCVPNLNTYNVVIRGLCHSGDMERAVEYM-GRMEKHGIRPSVQTYNVVIRYFCDAGEI 407
K VP++ + ++R + D++ ++++ R+ K GI + + YN VI A +
Sbjct: 622 QKDIVPDVYLFRDMLR-IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPL 680
Query: 408 EKGLSMFEKMGDGSCSCLPNLDTYNVLIS 436
++ FE+M + PN T+NVL+
Sbjct: 681 DELSGTFEEMIRYGFT--PNTVTFNVLLD 707
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 74/170 (43%)
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
Y++++ Y R +A E MK+ + + + + M++ + G+++ ++ + M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
AG P++ YN LI K ++ A +F + G P+ +Y +I G + +
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSC 422
E A Y +++ G +P+ +I G+ + + E M C
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGC 450
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
D V+ +I C R A ++KE+ E+ P TYN LLK +C L +EF
Sbjct: 158 DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV 217
Query: 275 LEMKKR-KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCK 333
EM+ + D+V++T ++ + ++++ + ++ AG P YN +++ C
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 334 KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQT 393
A+ V+++M +G P+ TYN +I GL +G +E A Y+ M G P T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 394 YNVVIRYFCDAG 405
Y ++ C G
Sbjct: 338 YTSLMNGMCRKG 349
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 161 GKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF--RCDSVS 218
G+ A + + E D ++N +L LCK K + + + R F + D VS
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 219 YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
+ I+ + C K A+ ++ ++ G P YNT++KG+ + EA + +MK
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
+ E D +TY T++ G AG V++++ MV AG P ATY +L+ +C+K
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 168 RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC-DSVSYNIIANGW 226
RV M +G D + + + LC+T RV+ A L K + D+ +YN +
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 227 CLIKRTPMALQVLKEMAER-GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
C K + + + EM + + P +V++ L+ LREA ++ + D
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
Y T++ GF + ++ V+ +M G+ P TYN LI L K V+ A + +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSG 370
MV G P+ TY ++ G+C G
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 283 EIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALL 342
E D VT V G V ++K + E+ P TYN L++ LCK +
Sbjct: 156 EPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYE 215
Query: 343 VFEEMVGKGCV-PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYF 401
+EM V P+L ++ ++I +C+S ++ A+ + ++ G +P YN +++ F
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 402 CDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
C + + + +++KM + P+ TYN LI F K+ + A L MVD G
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVE--PDQITYNTLI---FGLSKAGRVEEARMYLKTMVDAG 330
Query: 462 FLPRKFTFNRVLNGLALTG 480
+ P T+ ++NG+ G
Sbjct: 331 YEPDTATYTSLMNGMCRKG 349
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
RV + MV GL P T + ++ LC+ V A + +E+ K P+ TYN +++ L
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 367 CHSGDMERAVEYMGRM-EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
C D+ E++ M + ++P + ++ ++I C++ + + + + K+G+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK-- 262
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFA 485
P+ YN ++ K + V K +M + G P + T+N ++ GL+ G E A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYK---KMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 486 KEILRMQSRCGH 497
+ L+ G+
Sbjct: 320 RMYLKTMVDAGY 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 258 LKGYFRCHQLREAWEFFLEMKK-RKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA- 315
L+ F+ L +A F + + +D+ + +++ +G V + ++F ++++
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 316 -GLVPSVATYNALIQVLCK--KDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
P +T+ L+ C+ + N V MV G P+ T ++ +R LC +G +
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
+ A + M + + P TYN ++++ C ++ ++M D P+L ++
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD-DFDVKPDLVSFT 234
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+LI + S++L A L+ ++ + GF P F +N ++ G
Sbjct: 235 ILIDNVC---NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
E F EM +R + VTYTT++ G AG+ ++ +F EMV G+ P + TYN L+ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 332 CKKDCVQNALL---------VFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM 382
CK ++ AL+ +F + KG PN+ TY +I G C G E A +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRK 442
++ G P TYN +IR G+ + ++M SC + TY ++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTYGLVT------- 172
Query: 443 KSEDLVVAGKLLIEMVDRGFL 463
D++ G+L D+GFL
Sbjct: 173 ---DMLHDGRL-----DKGFL 185
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
+++ +EM++RG+ VTY TL++G F+ A E F EM D++TY ++ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 296 FG---------VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
VAG+V+ +F + G+ P+V TY +I CKK + A +F +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
M G +P+ TYN +IR GD + E + M TY +V D G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GR 179
Query: 407 IEKGL 411
++KG
Sbjct: 180 LDKGF 184
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREA---- 270
++V+Y + G MA ++ KEM G+ P ++TYN LL G + +L +A
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 271 -----WEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
W+ F + + + +VVTYTTM+ GF G +++ +F +M G +P TYN
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 326 ALIQV-LCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
LI+ L D +A L+ +EM + +TY +V + H G +++
Sbjct: 135 TLIRAHLRDGDKAASAELI-KEMRSCRFAGDASTYGLVTD-MLHDGRLDKG 183
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 148 RAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT 207
+ F+ L GKP A + I+ E + I+ LC +VE A + +
Sbjct: 463 KTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINEL 522
Query: 208 FRGRFRCDSVS-YNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
F S + + G + R +A +++ M E+G +PT Y +++ C
Sbjct: 523 FNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCV--CEM 580
Query: 267 LREAWEFFLEMKKRKCEI---DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
FF + K + + V Y + G G AG+ K ++ V+D M R G+ P+VA+
Sbjct: 581 ESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVAS 640
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
++Q K + + +AL F ++ +G Y V+I GLC + ++ A+ ++ M+
Sbjct: 641 NILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEMK 699
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSM---FEKMGDGSCSCLPNLDTYNVLIS 436
G++PS++ Y V I+ C+ + ++ + + F K G + + N+ +N + S
Sbjct: 700 GEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKS 755
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 142/357 (39%), Gaps = 31/357 (8%)
Query: 151 AILAERYAAAGKPHRA---VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT 207
+IL +++ GK A +R + GC L ++D LC ++ + A L
Sbjct: 255 SILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLG---ILVDALCSKRKFQEATKLLDE 311
Query: 208 FR--GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE--RGISP------TMVTYNTL 257
+ G D +YNI W R + L A+ + ISP + YN++
Sbjct: 312 IKLVGTVNMDR-AYNI----WI---RALIKAGFLNNPADFLQKISPLEGCELEVFRYNSM 363
Query: 258 LKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGL 317
+ + + L ++ EM R + T + F AG V ++ ++ G
Sbjct: 364 VFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGF 423
Query: 318 VPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVE 377
P+ +YN LI LC + V+ A V + + +G T++ + LC G + A E
Sbjct: 424 APTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARE 483
Query: 378 YMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISA 437
+ + + P +I CD G++E L + E + T + S
Sbjct: 484 LVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSI 543
Query: 438 MFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLA--LTGNQEFAKEILRMQ 492
+R +A KL+I M ++G+ P + + V+ + +G + F +L+ Q
Sbjct: 544 TLMRGD-----IAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQ 595
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 169/432 (39%), Gaps = 11/432 (2%)
Query: 69 LENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDY 128
L N R T + V +VL L+FF R P + H+ + F I +
Sbjct: 103 LSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKLV 162
Query: 129 TTAWTLVSR---MRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
T + R S R + R L YA AG+ A++ F +M G D +
Sbjct: 163 TLMIDFLDRSVGFESCRH--SLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGY 220
Query: 186 NTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
+ +L+ L + K + +F R +V+++I+ +C + A L+ +
Sbjct: 221 HVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPN 280
Query: 246 GISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKS 305
+ L+ + +EA + E+K Y + AG +
Sbjct: 281 DPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNP 340
Query: 306 KRVFDEMV-RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
++ G V YN+++ L K++ + + EM+ +G PN T N +
Sbjct: 341 ADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALC 400
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
C +G ++ A+E + G P+ +YN +I C +E+ + + D
Sbjct: 401 FFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDR--GH 458
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
T++ L +A+ + K + +A +L+I +R LP++ ++++ L G E
Sbjct: 459 FLGGKTFSTLTNALCWKGKPD---MARELVIAAAERDLLPKRIAGCKIISALCDVGKVED 515
Query: 485 AKEILRMQSRCG 496
A I + ++ G
Sbjct: 516 ALMINELFNKSG 527
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 11/247 (4%)
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
+ L+ GY + A + F M+ R ++D Y +++ +FD++
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISV 245
Query: 315 AGLVPSVATYNALIQVLCKK---DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
G V +V T++ L++ CK+ D ++ L GC L +++ LC
Sbjct: 246 RGFVCAV-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLG---ILVDALCSKRK 301
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
+ A + + ++ G + YN+ IR AG + +K+ C + Y
Sbjct: 302 FQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE-GCELEVFRY 360
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
N S +F K +L +L EM+ RG P K T N L G + A E+ R
Sbjct: 361 N---SMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRS 417
Query: 492 QSRCGHA 498
+S G A
Sbjct: 418 RSEIGFA 424
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 143/325 (44%), Gaps = 40/325 (12%)
Query: 156 RYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRC 214
++ A +A+ ++ S+ + + ++ N+IL L K +++ LF R +
Sbjct: 140 KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKP 199
Query: 215 DSVSYNIIANGWCLIKRT-PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEF 273
D V+YN + G +K P A++++ E+ GI V Y T+L + EA F
Sbjct: 200 DVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENF 259
Query: 274 FLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQV--- 330
+MK ++ Y+++++ + G+ KK+ + EM GLVP+ L++V
Sbjct: 260 IQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIK 319
Query: 331 --------------------------------LCKKDCVQNALLVFEEMVGKGCVPNLNT 358
L K ++ A +F++M GKG +
Sbjct: 320 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYA 379
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
+++I LC S + A E E + + N ++ +C AGE+E + M +KM
Sbjct: 380 NSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKK 443
+ + S P+ +T+++LI F+++K
Sbjct: 440 EQAVS--PDYNTFHILIK-YFIKEK 461
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 108/240 (45%), Gaps = 4/240 (1%)
Query: 134 LVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC 193
L+S + S + +L + + AGK A +F M G R D + + ++ LC
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 194 KTKRVEMAHSLFKTFRGRF-RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV 252
++KR + A L + + +CD V N + +C ++++K+M E+ +SP
Sbjct: 389 RSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYN 448
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
T++ L+K + + A++ L+M + ++ +++++ G ++ V++ +
Sbjct: 449 TFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNML 508
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
+ + ++ +L + + +++A +V ++ P L + R SG++
Sbjct: 509 RYSKRTICKELHEKILHILIQGNLLKDAYIVVKDNAKMISQPTLKKFG---RAFMISGNI 565
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 110/245 (44%), Gaps = 8/245 (3%)
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
N +L+ + + ++ + F E ++ +I V TY++ + G A V K+ ++ +
Sbjct: 102 NVILRDFGISGRWQDLIQLF-EWMQQHGKISVSTYSSCIKFVG-AKNVSKALEIYQSIPD 159
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH-SGDME 373
+V N+++ L K + + + +F++M G P++ TYN ++ G
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP 219
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNV 433
+A+E +G + +GI+ Y V+ G E+ + ++M S PN+ Y+
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS--PNIYHYSS 277
Query: 434 LISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQS 493
L+++ + D A +L+ EM G +P K +L G + ++E+L
Sbjct: 278 LLNSYSWKG---DYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 494 RCGHA 498
G+A
Sbjct: 335 SAGYA 339
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 266 QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
+++ + +F +++ + V ++ FG++G + ++F+ M + G + SV+TY+
Sbjct: 78 EVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHGKI-SVSTYS 136
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
+ I+ + K+ V AL +++ + + N+ N ++ L +G ++ ++ +M++
Sbjct: 137 SCIKFVGAKN-VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRD 195
Query: 386 GIRPSVQTYNVVIRYFCDAG--EIEKGL-SMFEKMGDGSCSCLPN----LDT--YNVLIS 436
G++P V TYN ++ AG +++ G E +G+ LP+ +D+ Y +++
Sbjct: 196 GLKPDVVTYNTLL-----AGCIKVKNGYPKAIELIGE-----LPHNGIQMDSVMYGTVLA 245
Query: 437 AMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
+SE+ A + +M G P + ++ +LN + G+ + A E++
Sbjct: 246 ICASNGRSEE---AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELM 295
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 110 HSPSGFEHA--IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAV 167
HSP+ + ++ ++ + DY A L++ M+S+ P L + Y G R+
Sbjct: 268 HSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSR 327
Query: 168 RVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGW 226
+ + G ++ + ++D L K ++E A S+F +G+ R D + +I+ +
Sbjct: 328 ELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISAL 387
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
C KR A ++ ++ +V NT+L Y R ++ +M ++ D
Sbjct: 388 CRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 447
Query: 287 VTYTTMVHGF 296
T+ ++ F
Sbjct: 448 NTFHILIKYF 457
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 156/369 (42%), Gaps = 69/369 (18%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDS 216
YA +GK A ++F + QD+ ++ ++ + + VE A LF R +
Sbjct: 260 YAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER---NE 312
Query: 217 VSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLE 276
VS+N + G+ +R MA ++ M R +S T+NT++ GY +C ++ EA F +
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDK 368
Query: 277 MKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY------------ 324
M KR D V++ M+ G+ +G ++ R+F +M R G + +++
Sbjct: 369 MPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 325 -----------------------NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
NAL+ + CK ++ A +F+EM GK V ++N
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV----SWNT 480
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I G G E A+ + M++ G++P T V+ G ++KG F M
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ-D 539
Query: 422 CSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE----MVDRGFLPRKFTFNRVLNGLA 477
+PN Y ++ DL+ LL + M + F P + +L
Sbjct: 540 YGVMPNSQHYACMV----------DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 478 LTGNQEFAK 486
+ GN E A+
Sbjct: 590 VHGNTELAE 598
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 36/309 (11%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLK 240
D+ +N + +T R A +FK R SVSYN + +G+ +A ++
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP---RWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
EM ER +V++N ++KGY R L +A E F M +R DV ++ TM+ G+ G
Sbjct: 120 EMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNG 171
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
V ++ VFD M V ++NAL+ + ++ A ++F+ V ++N
Sbjct: 172 CVDDARSVFDRMPEKNDV----SWNALLSAYVQNSKMEEACMLFKSRENWALV----SWN 223
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
++ G + A ++ M +R V ++N +I + +G+I++ +F++
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMN---VRDVV-SWNTIITGYAQSGKIDEARQLFDE---- 275
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
S + ++ T+ ++S + E+ A +L +M +R + ++N +L G
Sbjct: 276 --SPVQDVFTWTAMVSGYIQNRMVEE---ARELFDKMPERN----EVSWNAMLAGYVQGE 326
Query: 481 NQEFAKEIL 489
E AKE+
Sbjct: 327 RMEMAKELF 335
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 180 QDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVL 239
+D+ S+NT+L + V+ A S+F + + VS+N + + + + A +
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK---NDVSWNALLSAYVQNSKMEEACMLF 211
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
K + +V++N LL G+ + ++ EA +FF M R DVV++ T++ G+ +
Sbjct: 212 KSRE----NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQS 263
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
G++ +++++FDE V V T+ A++ + V+ A +F++M + V ++
Sbjct: 264 GKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV----SW 315
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
N ++ G ME A E M +V T+N +I + G+I + ++F+KM
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKM 369
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 119/317 (37%), Gaps = 50/317 (15%)
Query: 147 PRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF- 205
P ++A + Y+ +G A+R+F+ M G R + +SF++ L +E+ L
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 206 KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCH 265
+ +G + N + +C A + KEMA + I V++NT++ GY R
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI----VSWNTMIAGYSR-- 487
Query: 266 QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
HGF GEV + R F+ M R GL P AT
Sbjct: 488 ----------------------------HGF---GEV--ALRFFESMKREGLKPDDATMV 514
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGK-GCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
A++ V F M G +PN Y ++ L +G +E A M M
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP- 573
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKS 444
P + ++ A + + E D + P VL+S ++
Sbjct: 574 --FEPDAAIWGTLL----GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGR 627
Query: 445 EDLVVAGKLLIEMVDRG 461
V GKL + M D+G
Sbjct: 628 WGDV--GKLRVRMRDKG 642
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 267 LREAWEFF-LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
+++AW FF + + + D TYTTM+ FG AG ++ VF M G++ TY
Sbjct: 102 MQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYT 161
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
+LI + V A+ ++EEM GC P + +Y ++ L G +E A E M +
Sbjct: 162 SLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRS 221
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
+ P+ TY V++ Y G+ E+ L +F KM + P+ N+LI+ K
Sbjct: 222 RVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQE--IGVQPDKAACNILIAKAL---KFG 276
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQE 483
+ ++L+ M + G + R F L L G +
Sbjct: 277 ETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESD 314
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 87/162 (53%)
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
+G TY T+L + +++ + F MK++ ID VTYT+++H +G+V
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
+ R+++EM G P+V +Y A +++L V+ A V++EM+ PN +TY V++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
L +G E A++ +M++ G++P N++I GE
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGE 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 125/311 (40%), Gaps = 18/311 (5%)
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMAL 236
G R D + N +L ++ + + +G F+ D +Y + + + R
Sbjct: 84 GVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKG-FKHDHFTYTTMLDIFGEAGRIQSMY 142
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
V M E+G+ VTY +L+ + A + EM+ CE VV+YT +
Sbjct: 143 SVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKML 202
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
G V+++ V+ EM+R+ + P+ TY L++ L + AL +F +M G P+
Sbjct: 203 FADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDK 262
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL----- 411
N++I G+ + M+++G+ + + AGE + L
Sbjct: 263 AACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNS 322
Query: 412 ---------SMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
S ++ + N D V+ S + ++ ++LV LL +M DR
Sbjct: 323 HISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMK---QNLVAVDILLNQMRDRNI 379
Query: 463 LPRKFTFNRVL 473
F + ++
Sbjct: 380 KLDSFVVSAII 390
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 12/210 (5%)
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG 246
I VL + + L R R + DS + I C RT A E G
Sbjct: 354 ISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMG 413
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
I Y L+ + R ++L + E EM K + + ++H G + +
Sbjct: 414 IHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAA 473
Query: 307 RVFDEMVRAGLVPS----VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
VFD L+P VA Y AL+ V + A+ + EM + +P+L TY+V+
Sbjct: 474 DVFD------LLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVL 527
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
+ GL + D ++ V + R EK + S +
Sbjct: 528 LSGLEKTSDFQKEVALL-RKEKKSLVASAR 556
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 132/268 (49%), Gaps = 15/268 (5%)
Query: 217 VSYNIIANGWCLIKRTPMALQVLKEMAERG-ISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
++YN+I + +++ +AL+ K + ++P++ T+ L+KG L +A E
Sbjct: 166 ITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKE 225
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR--AGLVPSVATYNALIQVLCK 333
+M + +D V Y+ ++ G + +++ E+ G V Y L++
Sbjct: 226 DMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFM 285
Query: 334 KDCVQNALLVFEEMVGKGCVPNLN--TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRP-- 389
K+ + A+ +EE VG+ ++ YN V+ L +G + A++ ++K P
Sbjct: 286 KEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRH 345
Query: 390 ---SVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSED 446
++ T+NV++ +C G+ E+ + +F +MGD CS P+ ++N L++ + +E
Sbjct: 346 LAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCS--PDTLSFNNLMNQLC---DNEL 400
Query: 447 LVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
L A KL EM ++ P ++T+ +++
Sbjct: 401 LAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 115/244 (47%), Gaps = 11/244 (4%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGR------FRCDSVSYNIIANGWCLIKRTPMALQ 237
++N +L+ L + + + A LF + + ++N++ NG+C + A++
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
V ++M + SP +++N L+ L EA + + EM+++ + D TY ++
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
G++ + + MV + L P++A YN L L K + +A F+ MV K + +
Sbjct: 432 KEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDD-E 490
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRM-EKHGIRPSVQTYNVV---IRYFCDAGEIEKGLSM 413
Y ++R L +G ++ ++ + M + +R S + V +R G++EK +
Sbjct: 491 AYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLMEE 550
Query: 414 FEKM 417
E++
Sbjct: 551 KERL 554
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
F ++ Y A GK A+ VF M + C D SFN +++ LC + + A L+
Sbjct: 353 FNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEME 412
Query: 210 GR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
+ + D +Y ++ + + K M E + P + YN L + +L
Sbjct: 413 EKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 472
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV 313
+A FF +M K ++D Y ++ AG + + ++ DEM+
Sbjct: 473 DAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 108/283 (38%), Gaps = 79/283 (27%)
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
LQ+ + + GI+P ++TYN + + Y RK EI + Y +
Sbjct: 150 LQLHGFINQAGIAPNIITYNLIFQAYLDV---------------RKPEIALEHYKLFIDN 194
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
A L PS+AT+ L++ L D ++ A+ + E+M KG V +
Sbjct: 195 -------------------APLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVD 235
Query: 356 LNTYNVVIRGLCHSGDMERAVE--------------------------YMGRMEKHG--- 386
Y+ ++ G + D + ++ +M MEK
Sbjct: 236 PVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMEC 295
Query: 387 ----------IRPSVQTYNVVIRYFCDAGEIEKGLSMFE---KMGDGSCSCLPNLDTYNV 433
+R S YN V+ + G+ ++ L +F+ K + NL T+NV
Sbjct: 296 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 355
Query: 434 LISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
+++ K E+ A ++ +M D P +FN ++N L
Sbjct: 356 MVNGYCAGGKFEE---AMEVFRQMGDFKCSPDTLSFNNLMNQL 395
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 146/371 (39%), Gaps = 58/371 (15%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
ID+ DY + + + L+ P + I + + ++V+ +M
Sbjct: 274 IDVCGLCGDYVKSRYIYEDL--LKENIKPNIYVINSLMNVNSHDLGYTLKVYKNMQILDV 331
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFR-----GRFRCDSVSYNIIANGWCLIKRTP 233
D+ S+N +L C RV++A ++K + G + D+ +Y I + K
Sbjct: 332 TADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWK 391
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
AL+V +M G++P T+++L+ + +A F EM CE + + ++
Sbjct: 392 WALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILL 451
Query: 294 HGFGVAGEVKKSKRVF--------------DEMVRAG----------------------- 316
H A + ++ R+F D++V G
Sbjct: 452 HACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNS 511
Query: 317 ----------LVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
P+ ATYN L++ C D + L+ +EM G PN T++ +I
Sbjct: 512 PYIQASKRFCFKPTTATYNILLKA-CGTDYYRGKELM-DEMKSLGLSPNQITWSTLIDMC 569
Query: 367 CHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
SGD+E AV + M G RP V Y I+ + ++ S+FE+M P
Sbjct: 570 GGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIK--P 627
Query: 427 NLDTYNVLISA 437
N TYN L+ A
Sbjct: 628 NWVTYNTLLKA 638
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 33/324 (10%)
Query: 119 IDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGC 178
I + A + + A + M+S+ P ++ L A AG +A +F M GC
Sbjct: 381 IKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGC 440
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSV------------SYNIIANGW 226
+ FN +L + + + A LF++++G +S+ S NI+ N
Sbjct: 441 EPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNG 500
Query: 227 --CLIKRTPMA--LQVLKEMAERGISPTMVTYNTLLKG----YFRCHQLREAWEFFLEMK 278
L+ R + +Q K PT TYN LLK Y+R +L + EMK
Sbjct: 501 PGSLVNRNSNSPYIQASKRFC---FKPTTATYNILLKACGTDYYRGKELMD------EMK 551
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+ +T++T++ G +G+V+ + R+ M AG P V Y I++ + C++
Sbjct: 552 SLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLK 611
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG---DMERAVEYMGRMEKHGIRPSVQTYN 395
A +FEEM PN TYN +++ G ++ + + M G +P+
Sbjct: 612 LAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLK 671
Query: 396 VVIRYFCDAGEIEKGLSMFEKMGD 419
+I +C+ E G S +K+ D
Sbjct: 672 ELIEEWCEGVIQENGQSQ-DKISD 694
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 19/275 (6%)
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKC----EIDVVTYTT 291
L+V K M ++ M +YN LLK ++ A + + E K+ + ++D TY T
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++ F A K + +V D+M G+ P+ T+++LI V+ A +FEEM+ G
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
C PN +N+++ + +RA + + S+ ++V + + I K
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN 499
Query: 412 SMFEKMGDGSCS---------CL-PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG 461
+ S S C P TYN+L+ A D +L+ EM G
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKAC-----GTDYYRGKELMDEMKSLG 554
Query: 462 FLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
P + T++ +++ +G+ E A ILR G
Sbjct: 555 LSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAG 589
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 291 TMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK 350
TM+ G+ G+ KS+ +++++++ + P++ N+L+ V + L V++ M
Sbjct: 272 TMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQIL 329
Query: 351 GCVPNLNTYNVVIRGLCHSGDMERAVEY---MGRMEKHG-IRPSVQTYNVVIRYFCDAGE 406
++ +YN++++ C +G ++ A + RME G ++ TY +I+ F DA
Sbjct: 330 DVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKM 389
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
+ L + + M S PN T++ LISA E A L EM+ G P
Sbjct: 390 WKWALKVKDDM--KSVGVTPNTHTWSSLISACANAGLVEQ---ANHLFEEMLASGCEPNS 444
Query: 467 FTFNRVLNG 475
FN +L+
Sbjct: 445 QCFNILLHA 453
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 41/198 (20%)
Query: 88 LWNHGPKAL----QFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRR 143
L N+GP +L ++ + P+ + I + A DY L+ M+SL
Sbjct: 496 LKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGL 555
Query: 144 GPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHS 203
P ++ L + +G AVR+ +MH G R D+ ++ T + + + K +++A S
Sbjct: 556 SPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFS 615
Query: 204 LFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG--- 260
LF +EM I P VTYNTLLK
Sbjct: 616 LF----------------------------------EEMRRYQIKPNWVTYNTLLKARSK 641
Query: 261 YFRCHQLREAWEFFLEMK 278
Y ++R+ + +M+
Sbjct: 642 YGSLLEVRQCLAIYQDMR 659
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 154/360 (42%), Gaps = 57/360 (15%)
Query: 166 AVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANG 225
VR + + E +D S+N++L L K + A LF R D +S+N + +G
Sbjct: 169 GVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR---DLISWNTMLDG 225
Query: 226 WCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
+ + A ++ ++M ER V+++T++ GY + + A F +M +
Sbjct: 226 YARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KN 279
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT---------------------- 323
VVT+T ++ G+ G +K++ R+ D+MV +GL A
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 324 -------------YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSG 370
NAL+ + K ++ A VF ++ K +L ++N ++ GL G
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHG 395
Query: 371 DMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT 430
+ A+E RM + GIRP T+ V+ AG I++G+ F M + +P ++
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM-EKVYDLVPQVEH 454
Query: 431 YNVLISAMF-VRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
Y L+ + V + E + V + +E P + +L + + AKE+L
Sbjct: 455 YGCLVDLLGRVGRLKEAIKVVQTMPME-------PNVVIWGALLGACRMHNEVDIAKEVL 507
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 50/339 (14%)
Query: 166 AVRVFISMHE---HGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR--GRFRCDSVSYN 220
AVRVF + E H C N+++ + + A +F + G F D+ +Y
Sbjct: 70 AVRVFNQVQEPNVHLC-------NSLIRAHAQNSQPYQAFFVFSEMQRFGLF-ADNFTYP 121
Query: 221 IIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL--REAWEFFLEMK 278
+ P+ + + + G+S + N L+ Y RC L R+A + F +M
Sbjct: 122 FLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS 181
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+R D V++ +M+ G AGE++ ++R+FDEM + L+ ++N ++ + +
Sbjct: 182 ER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI----SWNTMLDGYARCREMS 233
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
A +FE+M + V +++ ++ G +GDME A +M + NVV
Sbjct: 234 KAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKM-------PLPAKNVVT 282
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
AG EKGL L + L+ M D +L
Sbjct: 283 WTIIIAGYAEKGL----------------LKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 459 DRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCGH 497
+ G L + +L L N +L M ++CG+
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 15/237 (6%)
Query: 186 NTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAER 245
N +LD+ K K +A F + + D S+N + G+ + A V +M +R
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKK---DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 246 GISPTMVTYNTLLKGYFR--CHQLREAWEFFLEMK-KRKCEIDVVTYTTMVHGFGVAGEV 302
+V++N+LL GY + C Q R E F EM K + D VT +++ G GE+
Sbjct: 330 ----DLVSWNSLLFGYSKKGCDQ-RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
+ V ++R L +ALI + CK ++ A +VF+ K ++ + +
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK----DVALWTSM 440
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
I GL G+ ++A++ GRM++ G+ P+ T V+ +G +E+GL +F M D
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKD 497
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 19/235 (8%)
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
S ++ N LL YF+C + A F MKK+ D+ ++ TMV GF G+++ ++
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKK----DMRSWNTMVVGFVRLGDMEAAQA 321
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNAL--LVFEEMVGKGCVPNLNTYNVVIRG 365
VFD+M + LV ++N+L+ KK C Q + L +E + + P+ T +I G
Sbjct: 322 VFDQMPKRDLV----SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISG 377
Query: 366 LCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
++G++ G + + ++ + +I +C G IE+ +F+ +
Sbjct: 378 AANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE------ 431
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
++ + +I+ + + A +L M + G P T VL + +G
Sbjct: 432 KDVALWTSMITGLAFHGNGQQ---ALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 17/272 (6%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L Y++ G A RVF + +DL ++N++++ K ++ A LF R
Sbjct: 103 LLNMYSSCGDLRSAQRVF----DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER- 157
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMA-----ERGISPTMVTYNTLLKGYFRCHQL 267
+ +S++ + NG+ + + AL + +EM E + P T +T+L R L
Sbjct: 158 --NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGAL 215
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNAL 327
+ + K EID+V T ++ + G ++++KRVF+ + G V Y+A+
Sbjct: 216 EQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL---GSKKDVKAYSAM 272
Query: 328 IQVLCKKDCVQNALLVFEEMVGKGCV-PNLNTYNVVIRGLCHSGDMERAVEYMGRM-EKH 385
I L +F EM + PN T+ ++ H G + Y M E+
Sbjct: 273 ICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEF 332
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
GI PS+Q Y ++ + +G I++ S M
Sbjct: 333 GITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 121/311 (38%), Gaps = 36/311 (11%)
Query: 143 RGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLC-KTKRVEMA 201
+ P + + Y G A +F+ E GC + + +++ L + K E
Sbjct: 700 KTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE 759
Query: 202 HSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY 261
H D+V YN + + A ++ + M G+ ++ TYNT++ Y
Sbjct: 760 HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 262 FRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSV 321
R QL +A E F ++ +D YT M+ +G G++ ++ +F EM + G+ P
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGT 879
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR----------------- 364
+YN ++++ + + M G +L+TY +I+
Sbjct: 880 PSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 365 ------------------GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
L +G ME A +M + GI P +++ + G+
Sbjct: 940 VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGD 999
Query: 407 IEKGLSMFEKM 417
EKG+ +EKM
Sbjct: 1000 AEKGILFYEKM 1010
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 249 PTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRV 308
P++V Y +L+ Y + +++ A E FLEM + CE D V TM+ + G
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 309 FDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
+ + ++ S + YN ++ L KK + ++ EMV +G PN TY +V+
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
G E A++ G M+ G P TY+ VI AG+ EK + ++E M S +P+
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM--RSQGIVPSN 363
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLAL 478
T ++S + K+E+ A L +M +R +P + V+ GL +
Sbjct: 364 YTCATMLSLYY---KTENYPKALSLFADM-ERNKIPA----DEVIRGLII 405
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 235 ALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVH 294
A + E AE+G P VT + L+ + REA ++ E+D V Y T++
Sbjct: 723 AYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIK 782
Query: 295 GFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVP 354
AG+++ + +++ M +G+ S+ TYN +I V + + A+ +F G
Sbjct: 783 AMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYL 842
Query: 355 NLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAG----EIEKG 410
+ Y +I G M A+ M+K GI+P +YN++++ C E+++
Sbjct: 843 DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDEL 901
Query: 411 LSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
L E+ +G C+ +L TY LI V +S A K + + ++G
Sbjct: 902 LQAMER--NGRCT---DLSTYLTLIQ---VYAESSQFAEAEKTITLVKEKGI 945
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 139/352 (39%), Gaps = 39/352 (11%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P+ + I+ Y GK A F+ M E GC D + T+L + R HS
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGR----HSA 241
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
TF K + ER I + YN +L +
Sbjct: 242 MLTF------------------------------YKAVQERRILLSTSVYNFMLSSLQKK 271
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+ + +LEM + + TYT +V + G +++ + F EM G VP TY
Sbjct: 272 SFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTY 331
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK 384
+++I + K + A+ ++E+M +G VP+ T ++ + + +A+ ME+
Sbjct: 332 SSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMER 391
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKS 444
+ I ++IR + G SMFE+ + L + TY ++ V S
Sbjct: 392 NKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET--ERLNLLADEKTY---LAMSQVHLNS 446
Query: 445 EDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
++V A ++ M R +F + +L A N + A+E R S+ G
Sbjct: 447 GNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG 498
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+P +++ Y RC L +A+ F+E ++ C+ VT + +V+ G+ ++++
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+ + + YN LI+ + + +Q A ++E M G ++ TYN +I
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPN 427
+++A+E + G+ + Y +I ++ G++ + LS+F +M P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIK--PG 878
Query: 428 LDTYNVLI 435
+YN+++
Sbjct: 879 TPSYNMMV 886
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 6/244 (2%)
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
T TL+ Y R H+L+EA +L + K V +M+ + G ++ + +F E
Sbjct: 672 TIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVI-RSMIDAYVRCGWLEDAYGLFMES 730
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
G P T + L+ L + + A + + K + YN +I+ + +G +
Sbjct: 731 AEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKL 790
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
+ A E RM G+ S+QTYN +I + +++K + +F + T N
Sbjct: 791 QCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT-N 849
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQ 492
+++ K SE L L EM +G P ++N ++ A + E+L+
Sbjct: 850 MIMHYGKGGKMSEAL----SLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAM 905
Query: 493 SRCG 496
R G
Sbjct: 906 ERNG 909
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 113/289 (39%), Gaps = 35/289 (12%)
Query: 165 RAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIA 223
+ + +++ M E G + ++ ++ K E A F + F + V+Y+ +
Sbjct: 276 KVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Query: 224 NGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCE 283
+ A+ + ++M +GI P+ T T+L Y++ +A F +M++ K
Sbjct: 336 SLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIP 395
Query: 284 IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV 343
D V ++ +G G ++ +F+E R L+ TY A+ QV V AL V
Sbjct: 396 ADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDV 455
Query: 344 FEEMVGKGC----------------VPNLNTYNVVIRGLCHSG--------DM------- 372
E M + + N++ R L +G DM
Sbjct: 456 IEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRL 515
Query: 373 ---ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
E+A ++ ++ + ++ Y +R +C G + + + KMG
Sbjct: 516 NLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMG 564
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 163/372 (43%), Gaps = 20/372 (5%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQ--- 180
R D A+T+ MR + T ++++ + A A+R+F + R+
Sbjct: 154 RNGDIQKAFTVFEFMRK-KENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCF 212
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDS-VSYNIIANGWCLIKRTPMALQVL 239
D+ +NT + + + V +++ +G + ++Y+++ + + R+ +AL V
Sbjct: 213 DVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVY 272
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
EM IS ++ + + A + F M K+ + ++V T+++ G A
Sbjct: 273 DEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKA 332
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG-CVPNLNT 358
G+V +V+ + G P T+NAL+ L K + ++ L +F+ + + C N
Sbjct: 333 GKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYL 392
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMG 418
YN + G E+AV+ + ME G+ S +YN+VI + + + L ++E M
Sbjct: 393 YNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMA 452
Query: 419 DGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD--RGFLPRKFTFNRVLNGL 476
C PN TY L+ + + G L E+ D + P +N ++G+
Sbjct: 453 QRDCK--PNTFTYLSLVRS----------CIWGSLWDEVEDILKKVEPDVSLYNAAIHGM 500
Query: 477 ALTGNQEFAKEI 488
L +FAKE+
Sbjct: 501 CLRREFKFAKEL 512
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 139/317 (43%), Gaps = 7/317 (2%)
Query: 162 KPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNI 221
K A+ +F SM G + + ++ N+ L L + ++ A ++F+ R + +Y++
Sbjct: 122 KVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSL 181
Query: 222 IANGWCLIKRTPMALQVLKEMA---ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK 278
+ +K AL++ +E+ +R +V YNT + R + + E + MK
Sbjct: 182 MLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMK 241
Query: 279 KRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQ 338
+TY+ +V F G + + V+DEMV + A+I K++
Sbjct: 242 GDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWD 301
Query: 339 NALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVI 398
AL +F+ M+ KG PNL N +I L +G + + ++ G +P T+N ++
Sbjct: 302 LALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALL 361
Query: 399 RYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMV 458
A E L +F+ + + CL N YN +AM +K A KLL EM
Sbjct: 362 TALYKANRYEDVLQLFDMIRSENLCCL-NEYLYN---TAMVSCQKLGYWEKAVKLLYEME 417
Query: 459 DRGFLPRKFTFNRVLNG 475
G ++N V++
Sbjct: 418 GSGLTVSTSSYNLVISA 434
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 138/327 (42%), Gaps = 9/327 (2%)
Query: 95 ALQFFKHLDRHPT--YIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAI 152
AL+ F+ L+R P + AI + R+ + + M+ T +++
Sbjct: 195 ALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSL 254
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKT-FRGR 211
L + G+ A+ V+ M + ++ ++ K ++ ++A +F++ +
Sbjct: 255 LVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKG 314
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
+ + V+ N + N + + +V + G P T+N LL ++ ++ +
Sbjct: 315 MKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVL 374
Query: 272 EFFLEMKKRK-CEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQV 330
+ F ++ C ++ Y T + G +K+ ++ EM +GL S ++YN +I
Sbjct: 375 QLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA 434
Query: 331 LCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
K + ALLV+E M + C PN TY ++R C G + VE + + + P
Sbjct: 435 CEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSLWDEVEDILK----KVEPD 489
Query: 391 VQTYNVVIRYFCDAGEIEKGLSMFEKM 417
V YN I C E + ++ KM
Sbjct: 490 VSLYNAAIHGMCLRREFKFAKELYVKM 516
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 141 LRRGPTPRAFA--ILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRV 198
L++G P A L AGK +V+ + G + D ++N +L L K R
Sbjct: 311 LKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 199 EMAHSLFKTFRGRFRC--DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNT 256
E LF R C + YN + A+++L EM G++ + +YN
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 257 LLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM--VR 314
++ + + + A + M +R C+ + TY ++V + G + +DE+ +
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSL------WDEVEDIL 483
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
+ P V+ YNA I +C + + A ++ +M G P+ T ++++ L
Sbjct: 484 KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 125/276 (45%), Gaps = 4/276 (1%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFK--- 206
+ L E++ G A + S+ E ++ F +L + ++++ +F+
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 207 TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
G+ S Y +A + +LKE++E + ++ N ++ + Q
Sbjct: 133 ILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQ 192
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVP-SVATYN 325
+ + EMK+ +C+ DV+TY +++ G AG V + V M V ++ TYN
Sbjct: 193 IDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYN 252
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
++ + K L+++ EMV G P+L +Y VI L SG+++ ++ M++
Sbjct: 253 TVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR 312
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
IRPSV Y +I +G+ + L + +++ + S
Sbjct: 313 QIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTS 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 9/242 (3%)
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
+ Y L++ + R L A++ ++++ + + + ++ G ++K S RVF E
Sbjct: 71 IDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFRE 130
Query: 312 -MVRAGLVP-SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
++ G P S Y L + D + +E+ L N +I +
Sbjct: 131 VLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAET 190
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
+++ + + M++ +P V TYN V+ AG + + L + M + CS N+
Sbjct: 191 RQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE-DCSVSVNII 249
Query: 430 TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
TYN +++ M +K+ + + EMV G P ++ V++ L +GN KE L
Sbjct: 250 TYNTVLNGM---RKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGN---VKESL 303
Query: 490 RM 491
R+
Sbjct: 304 RL 305
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 134/283 (47%), Gaps = 16/283 (5%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L + Y+A G+ A +VF M E R D+ ++ T++ + ++ A+SL +
Sbjct: 910 LIDFYSATGRIREARKVFDEMPE---RDDI-AWTTMVSAYRRVLDMDSANSLANQMSEK- 964
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
+ + N + NG+ + A + +M + I +++ T++KGY + + REA
Sbjct: 965 --NEATSNCLINGYMGLGNLEQAESLFNQMPVKDI----ISWTTMIKGYSQNKRYREAIA 1018
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
F +M + D VT +T++ G ++ K V ++ G V V +AL+ +
Sbjct: 1019 VFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYS 1078
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
K ++ ALLVF + K NL +N +I GL G + A++ +ME ++P+
Sbjct: 1079 KCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 1134
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLI 435
T+ V AG +++G ++ M D S + N++ Y ++
Sbjct: 1135 TFVSVFTACTHAGLVDEGRRIYRSMID-DYSIVSNVEHYGGMV 1176
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 23/259 (8%)
Query: 230 KRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTY 289
KR +A+ + +M E P + YN L KG+ C + E ++ M + TY
Sbjct: 819 KRLDLAVSTMTQMQE----PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTY 874
Query: 290 TTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVG 349
+++V A +S + + + G V LI ++ A VF+EM
Sbjct: 875 SSLVKASSFASRFGESLQA--HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 932
Query: 350 KGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEK 409
+ + + R L DM+ A +M + + T N +I + G +E+
Sbjct: 933 RDDIAWTTMVSAYRRVL----DMDSANSLANQMSE----KNEATSNCLINGYMGLGNLEQ 984
Query: 410 GLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTF 469
S+F +M + ++ ++ +I K+ + + + +M++ G +P + T
Sbjct: 985 AESLFNQMP------VKDIISWTTMIKGYSQNKRYREAIA---VFYKMMEEGIIPDEVTM 1035
Query: 470 NRVLNGLALTGNQEFAKEI 488
+ V++ A G E KE+
Sbjct: 1036 STVISACAHLGVLEIGKEV 1054
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 137/345 (39%), Gaps = 58/345 (16%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQV 238
QD N + KR+++A S + + YN + G+ +L++
Sbjct: 802 NQDCRLMNQFITACTSFKRLDLAVSTMTQMQ---EPNVFVYNALFKGFVTCSHPIRSLEL 858
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREA-----WEFFLEMKKRKCEIDVVTYTTMV 293
M +SP+ TY++L+K + E+ W+F V TT++
Sbjct: 859 YVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFH-------VKIQTTLI 911
Query: 294 HGFGVAGEVKKSKRVFDEMVR---AGLVPSVATY---------NALIQVLCKK-----DC 336
+ G ++++++VFDEM V+ Y N+L + +K +C
Sbjct: 912 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 971
Query: 337 VQNALLVF------EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
+ N + E + + V ++ ++ +I+G + A+ +M + GI P
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 391 VQTYNVVIRYFCDAG--EIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLV 448
T + VI G EI K + M+ L N +V I + V S+
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMY---------TLQNGFVLDVYIGSALVDMYSK--- 1079
Query: 449 VAGKLLIEMVDRGFLPRK--FTFNRVLNGLALTGNQEFAKEILRM 491
G L ++ LP+K F +N ++ GLA G FA+E L+M
Sbjct: 1080 -CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG---FAQEALKM 1120
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++D + + + + + + R D V YN + N K+ A VL+++ +RG
Sbjct: 565 VIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQ 624
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P+ VTY +++ C + EFF +M+K + + Y +V+ G+ ++
Sbjct: 625 KPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVH 683
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
++M G+V S A Y L + LC L + +++ P + TY +I+
Sbjct: 684 TVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACV 743
Query: 368 HSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM---------- 417
SG+++ A +M+K P++ T N++++ + G E+ +F+KM
Sbjct: 744 DSGNIKNAAYIFDQMKK-VCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNS 802
Query: 418 GDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGF 462
D LP+ T+N ++ ++K +D G EM+ G+
Sbjct: 803 SDFESRVLPDTYTFNTMLDTCAEQEKWDDF---GYAYREMLRHGY 844
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
++ F G D V++N + G+ A + EM +R V++N+++ G+ R
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRN 236
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
+ ++A + F EM+++ + D T ++++ G ++ + + + +VR +
Sbjct: 237 GRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVV 296
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVP--NLNTYNVVIRGLCHSGDMERAVEYMGRM 382
ALI + CK C++ L VFE C P L+ +N +I GL ++G ERA++ +
Sbjct: 297 TALIDMYCKCGCIEEGLNVFE------CAPKKQLSCWNSMILGLANNGFEERAMDLFSEL 350
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
E+ G+ P ++ V+ +GE+ + F M
Sbjct: 351 ERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 123/315 (39%), Gaps = 64/315 (20%)
Query: 219 YNIIANGWCLIKRTPMALQVLKEM--AERGISPTMVTYNTLLKGYFRCHQLR-------- 268
+N I G+ MA+ + +M + + P +TY ++ K Y R Q R
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 269 ---------------------------EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
EAW FL M DVV + +M+ GF G
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG----FDVVAWNSMIMGFAKCGL 207
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+ +++ +FDEM + V ++N++I + ++AL +F EM K P+ T
Sbjct: 208 IDQAQNLFDEMPQRNGV----SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 362 VIRGLCHSGDMERAV---EYM--GRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
++ + G E+ EY+ R E + I +I +C G IE+GL++FE
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSI-----VVTALIDMYCKCGCIEEGLNVFE- 317
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
C+ L +N +I + E A L E+ G P +F VL
Sbjct: 318 -----CAPKKQLSCWNSMILGLANNGFEER---AMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 477 ALTGNQEFAKEILRM 491
A +G A E R+
Sbjct: 370 AHSGEVHRADEFFRL 384
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 123/317 (38%), Gaps = 31/317 (9%)
Query: 67 EALENSPFRWTPELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMR 126
E + P R+TPE + + + L F + P + H + AI +
Sbjct: 128 ETISKLPPRFTPEELADAIT-LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK 186
Query: 127 DYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVF---ISMHEHGCRQDLN 183
Y +V+++ S+R + + + AGK RAV +F ++ CR +
Sbjct: 187 MYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIR 246
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMA 243
++ H LFK GR +++ + L ++M
Sbjct: 247 TY----------------HILFKALLGRGNNSYINHVYMETVRSL----------FRQMV 280
Query: 244 ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMK-KRKCEIDVVTYTTMVHGFGVAGEV 302
+ GI P + N L+KGY + +A F +M CE + TY ++HG G
Sbjct: 281 DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRT 340
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
++ + EM G VP+ +YN+L+ + +A+ EM+ G V + +Y +
Sbjct: 341 INARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTL 400
Query: 363 IRGLCHSGDMERAVEYM 379
+ C G + A +
Sbjct: 401 VDESCRKGKYDEATRLL 417
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 249 PTMVTYNTLLKG--------YFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
PT+ TY+ L K Y + F +M E DV +V G+ ++
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 301 EVKKSKRVFDEM-VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
V + R+F +M V P+ TY+ LI LC + NA + EM GKG VPN +Y
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSY 362
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
N ++ SG+++ AV+ + M ++G +Y ++ C G+ ++ + E + +
Sbjct: 363 NSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLRE 422
Query: 420 GSCSCLPNLDTYNVLISAM 438
L + D+Y+ L++ +
Sbjct: 423 KQ---LVDRDSYDKLVNVL 438
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 288 TYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEM 347
+Y + G A ++ + ++++ + + YN++I K + A+ +F M
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 348 VGKG---CVPNLNTYNVVIRGLCHSGD--------MERAVEYMGRMEKHGIRPSVQTYNV 396
V C P + TY+++ + L G+ ME +M GI P V N
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 397 VIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIE 456
+++ + + + L +F +M C PN TY+ LI + + ++ + A +LL E
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMS-VVYDCEPNSFTYDYLIHGLCAQGRT---INARELLSE 349
Query: 457 MVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
M +GF+P ++N ++N AL+G + A + L
Sbjct: 350 MKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL 382
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMAL 236
R+ + F+ ++ LC+ + V+ A +L +G ++V +N++ + A
Sbjct: 369 RRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV-FNLVVHACSKTGDLDEAK 427
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
+VLK M RG+ P + TY ++ GY + + EA E E KK+ ++ VTY ++ G+
Sbjct: 428 EVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCV-QNALLVFEEMVGKG 351
E ++ ++ +EM R G+ P+ YN LIQ C K + A ++FEEM KG
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 543
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 127/310 (40%), Gaps = 10/310 (3%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRFRCD 215
+ GK A VF E G + ++ L+ LCK ++ A S+ K + +
Sbjct: 241 FGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSE 300
Query: 216 SVSYNIIANGWCLIKRTPMALQV--LKEMAERGISPTMVTYNTLLKGYFRCH-QLREAWE 272
I +C + A V L + E+ + P V TL+ + + A E
Sbjct: 301 GEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQE 358
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
++ + ++ ++H VK +K + +M+ G P A +N ++
Sbjct: 359 MLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACS 418
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQ 392
K + A V + M +G P++ TY V+I G G M+ A E + +K + S
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 478
Query: 393 TYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGK 452
TY+ +IR +C E ++ L + +M PN D YN LI + + K+ D A
Sbjct: 479 TYHALIRGYCKIEEYDEALKLLNEM--DRFGVQPNADEYNKLIQSFCL--KALDWEKAEV 534
Query: 453 LLIEMVDRGF 462
L EM +G
Sbjct: 535 LFEEMKQKGL 544
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 271 WEFFLEM-KKRKCEI-DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
W+ E+ +K C + ++ ++ FG G+ K + VF + G P+ TY +
Sbjct: 214 WDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTL 273
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA--VEYMGRMEKHG 386
+ LCK+ + A V E+M+ G + +I C G E A V + + ++
Sbjct: 274 EALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKS 333
Query: 387 IRPSVQTYNVVIRYFC-DAGEIEKGLSMFEKMGDGSCSCLP-NLDTYNVLISAMFVRKKS 444
+ P + +I C + G I M +GD S + ++ +I ++ +
Sbjct: 334 LPP--RFVATLITALCKNDGTITFAQEM---LGDLSGEARRRGIKPFSDVIHSLCRMRNV 388
Query: 445 EDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR-MQSR 494
+D A LL++M+ +G P FN V++ + TG+ + AKE+L+ M+SR
Sbjct: 389 KD---AKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESR 436
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 23/295 (7%)
Query: 206 KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCH 265
+ F G D V++ + +G+ A+ EM + G++ +T ++LK +
Sbjct: 159 RLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVE 218
Query: 266 QLR---EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS-- 320
+R +LE + KC DV +++V +G +++VFDEM PS
Sbjct: 219 DVRFGRSVHGLYLETGRVKC--DVFIGSSLVDMYGKCSCYDDAQKVFDEM------PSRN 270
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMG 380
V T+ ALI + C +LVFEEM+ PN T + V+ H G + R
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 381 RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFV 440
M K+ I + +I + G +E+ + +FE++ + N+ T+ +I+
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE------KNVYTWTAMINGFAA 384
Query: 441 RKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI-LRMQSR 494
+ D A L M+ P + TF VL+ A G E + + L M+ R
Sbjct: 385 HGYARD---AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
V++N+L+ G + Q+ EA+E F +M + D+V++T M+ GF GE+ K +F
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF-- 395
Query: 312 MVRAGLVP--SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHS 369
G++P T+ A+I + AL F +M+ K PN T++ V+
Sbjct: 396 ----GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 370 GDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLD 429
D+ ++ GR+ K I + N ++ +C G +F SC PN+
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF------SCISEPNIV 505
Query: 430 TYNVLISA 437
+YN +IS
Sbjct: 506 SYNTMISG 513
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 140/319 (43%), Gaps = 33/319 (10%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPRAFAI-----LAERYAAAGKPHRAVRVFISMHEHGC 178
R R+ + LVSRM P F + L Y+ G A VF M
Sbjct: 290 RYREGSQIHGLVSRM--------PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK---- 337
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQV 238
+D S+N+++ L + K++ A+ LF+ G+ D VS+ + G+ +++
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGK---DMVSWTDMIKGFSGKGEISKCVEL 394
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
M E+ +T+ ++ + EA +F +M +++ + T+++++
Sbjct: 395 FGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATAS 450
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV--PNL 356
++ + ++ +V+ +V ++ N+L+ + CK +A +F C+ PN+
Sbjct: 451 LADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS------CISEPNI 504
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
+YN +I G ++G ++A++ +E G P+ T+ ++ G ++ G F+
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 417 MGDGSCSCLPNLDTYNVLI 435
M S + P D Y ++
Sbjct: 565 M-KSSYNIEPGPDHYACMV 582
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 28/293 (9%)
Query: 149 AFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
A +L Y AGK + AVRVF M +++ S ++++ CK R+ A SLF
Sbjct: 179 ASNVLLSGYLRAGKWNEAVRVFQGM----AVKEVVSCSSMVHGYCKMGRIVDARSLFDRM 234
Query: 209 RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL- 267
R + +++ + +G+ + M + G V NTL + C
Sbjct: 235 TER---NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG--DVKVNSNTLAVMFKACRDFV 289
Query: 268 --REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
RE + + + E D+ +++ + G + ++K VF M V ++N
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSV----SWN 345
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM-EK 384
+LI L ++ + A +FE+M GK V ++ +I+G G++ + VE G M EK
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMV----SWTDMIKGFSGKGEISKCVELFGMMPEK 401
Query: 385 HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISA 437
I T+ +I F G E+ L F KM PN T++ ++SA
Sbjct: 402 DNI-----TWTAMISAFVSNGYYEEALCWFHKMLQK--EVCPNSYTFSSVLSA 447
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 157/382 (41%), Gaps = 39/382 (10%)
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRA------------------- 166
R T W L+ +R P +L +R + PH A
Sbjct: 77 RPDTFLWNLM--IRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 167 VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGW 226
++ + + G D+ + N++++ T ++AH LF D VS+N + G+
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP---EPDDVSWNSVIKGY 191
Query: 227 CLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDV 286
+ +AL + ++MAE+ +++ T++ GY + +EA + F EM+ E D
Sbjct: 192 VKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 287 VTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEE 346
V+ + G +++ K + + + + LI + K ++ AL VF+
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 347 MVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
+ K ++ + +I G + G A+ M+K GI+P+V T+ V+ G
Sbjct: 308 IKKK----SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
+E+G +F M + + P ++ Y ++ + ++ L A + + EM P
Sbjct: 364 VEEGKLIFYSM-ERDYNLKPTIEHYGCIVDLL---GRAGLLDEAKRFIQEM---PLKPNA 416
Query: 467 FTFNRVLNGLALTGNQEFAKEI 488
+ +L + N E +EI
Sbjct: 417 VIWGALLKACRIHKNIELGEEI 438
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 54/303 (17%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L YA G A +F + E D S+N+++ K ++++A +LF+ +
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK- 210
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKG------------ 260
+++S+ + +G+ ALQ+ EM + P V+ L
Sbjct: 211 --NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 261 -----------------------YFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
Y +C ++ EA E F +KK+ V +T ++ G+
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS----VQAWTALISGYA 324
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMV-GKGCVPNL 356
G +++ F EM + G+ P+V T+ A++ V+ L+F M P +
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
Y ++ L +G ++ A ++ M ++P+ + +++ A I K + + E+
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALLK----ACRIHKNIELGEE 437
Query: 417 MGD 419
+G+
Sbjct: 438 IGE 440
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 113/314 (35%), Gaps = 36/314 (11%)
Query: 208 FRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQL 267
F G R D+ +N++ G+ +L + + M T+ +LLK
Sbjct: 72 FDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 268 REAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM--------------- 312
E + ++ K E DV ++++ + V G K + +FD +
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 313 VRAG-------LVPSVATYNA-----LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
V+AG L +A NA +I + D + AL +F EM P+ +
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
+ G +E+ + K IR V+I + GE+E+ L +F+ +
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
S + + LIS + + +EM G P TF VL + TG
Sbjct: 312 S------VQAWTALISGYAYHGHGREAISK---FMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 481 NQEFAKEILRMQSR 494
E K I R
Sbjct: 363 LVEEGKLIFYSMER 376
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 46/318 (14%)
Query: 151 AILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-R 209
+ LA Y +P A RVF M E D+ + +L K E A LF R
Sbjct: 202 STLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHR 257
Query: 210 GR-FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLR 268
G+ D ++ + ++R ++ ++ GI +V ++LL Y +C +R
Sbjct: 258 GKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM---------------- 312
EA + F M K+ + V+++ ++ G+ GE +K+ +F EM
Sbjct: 318 EARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACA 373
Query: 313 ---------------VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLN 357
VR G +V +ALI + K C+ +A V+ +M + N+
Sbjct: 374 GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM----SIRNMI 429
Query: 358 TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
T+N ++ L +G E AV + M K GI+P ++ ++ G +++G + F M
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Query: 418 GDGSCSCLPNLDTYNVLI 435
S P + Y+ +I
Sbjct: 490 AK-SYGIKPGTEHYSCMI 506
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 139/332 (41%), Gaps = 27/332 (8%)
Query: 100 KHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRG------PTPRAFAIL 153
+H +H + +PS A +R+ + L +R L TP+ +A L
Sbjct: 8 RHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASL 67
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCK-------TKRVEMAHSLFK 206
+ ++ + + G D N N++L + K T+RV
Sbjct: 68 LQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRV-------- 119
Query: 207 TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
F GRF D++S+ + +G+ K AL+V EM G+ T ++ +K +
Sbjct: 120 -FDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGE 178
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
+R F + E + +T+ + +GV E ++RVFDEM P V + A
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE----PDVICWTA 234
Query: 327 LIQVLCKKDCVQNALLVFEEM-VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
++ K D + AL +F M GKG VP+ +T+ V+ + +++ E G++ +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
GI +V + ++ + G + + +F M
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 151/365 (41%), Gaps = 40/365 (10%)
Query: 145 PTPRAFAI--LAERYAAAGKPHRAVRVFISMHEHG-CRQDLNSFNTILDVLCKTKRVEMA 201
P P AF L Y+ + +PH +V VF+ M G D SF ++ K VE
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI------KAVENF 119
Query: 202 HSLFKTFRGRFRCDSVSYNIIAN---GWCLIKR------TPMALQVLKEMAERGISPTMV 252
SL F + C ++ + + ++ G LI A +V EM + P +V
Sbjct: 120 RSLRTGF--QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ----PNLV 173
Query: 253 TYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEM 312
+N ++ FR + + A E F +M R + ++ M+ G+ AGE++ +KR+F EM
Sbjct: 174 AWNAVITACFRGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEM 229
Query: 313 VRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDM 372
V +++ +I + + L F E+ G PN + V+ SG
Sbjct: 230 PHRDDV----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSF 285
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
E G +EK G V N +I + G + +FE M + C + ++
Sbjct: 286 EFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC-----IVSWT 340
Query: 433 VLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRMQ 492
+I+ + + + E+ V +L EM G P +F +L+ + G E ++
Sbjct: 341 SMIAGLAMHGQGEEAV---RLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM 397
Query: 493 SRCGH 497
R H
Sbjct: 398 KRVYH 402
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 16/282 (5%)
Query: 141 LRRGPTPRAFAILAERY-AAAGKPHRAVRVFISMHEHGCR----QDLNSFNTILDVLCKT 195
+RR P F + A A K + + + ++H R DL + NT++ V
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 196 KRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
++ A LF R D V+YN++ +G + A ++ M R +V++N
Sbjct: 166 APIDSALQLFDENPQR---DVVTYNVLIDGLVKAREIVRARELFDSMPLR----DLVSWN 218
Query: 256 TLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRA 315
+L+ GY + + REA + F EM + D V + + +G+ +K K + D R
Sbjct: 219 SLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRK 278
Query: 316 GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERA 375
L L+ K + A+ +FE K L T+N +I GL G+ E
Sbjct: 279 RLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK----TLFTWNAMITGLAMHGNGELT 334
Query: 376 VEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
V+Y +M GI+P T+ V+ +G +++ ++F++M
Sbjct: 335 VDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM 376
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 3/280 (1%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISM- 173
F ID AR A+ +RS P F L +G RA V M
Sbjct: 540 FGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMK 599
Query: 174 -HEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGRFRCDSVSYNIIANGWCLIKR 231
H D S ++ C +VE A +++ + R Y I N
Sbjct: 600 AETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD 659
Query: 232 TPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTT 291
A + K+M E+ ++P V ++ L+ L EA+ + K + + ++Y++
Sbjct: 660 WDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSS 719
Query: 292 MVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
++ A + KK+ +++++ L P+++T NALI LC+ + + A+ +E+ G
Sbjct: 720 LMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLG 779
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
PN TY++++ D E + + + + + G+ P++
Sbjct: 780 LKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 145/375 (38%), Gaps = 49/375 (13%)
Query: 99 FKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYA 158
F L +PT S F + + A +D A ++ ++ + + L A
Sbjct: 458 FTKLILNPTM----STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCA 513
Query: 159 AAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCDSV 217
+GK VF M G +L++F ++D + +V A + R + + D V
Sbjct: 514 KSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRV 573
Query: 218 SYNIIANGWCLIKRTPMALQVLKEMAERG--ISPTMVTYNTLLKGYFRCHQLREA----- 270
+N + + A VL EM I P ++ L+K Q+ A
Sbjct: 574 VFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ 633
Query: 271 --------------------------WEF----FLEMKKRKCEIDVVTYTTMVHGFGVAG 300
W+F + +MK++ D V ++ ++ G A
Sbjct: 634 MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAK 693
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+ ++ + + G+ +Y++L+ C + AL ++E++ P ++T N
Sbjct: 694 MLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMN 753
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM-GD 419
+I LC + +A+EY+ ++ G++P+ TY++++ + E + + GD
Sbjct: 754 ALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGD 813
Query: 420 GS------CSCLPNL 428
G C C+ +L
Sbjct: 814 GVSPNLIMCRCITSL 828
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
++PTM T+N L+ + A +++ D YTT++ +G+V
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
VF +M +G+ ++ T+ ALI + V A + + K P+ +N +I
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 367 CHSGDMERAVEYMGRM--EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
SG ++RA + + M E H I P + +++ C+AG++E+ +++ +
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
P + Y + +++ KS D A + +M ++ P + F+ +++
Sbjct: 643 TP--EVYTIAVNSC---SKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 27/288 (9%)
Query: 206 KTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCH 265
+ + R D++++ + ++ + Q ++ G + N+L+ Y C
Sbjct: 107 QMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCG 166
Query: 266 QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
+ A F +M R DVV++T+MV G+ G V+ ++ +FDEM L T++
Sbjct: 167 FIAAAGRIFGQMGFR----DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF----TWS 218
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDME---RAVEYMGRM 382
+I K +C + A+ +FE M +G V N VI H G +E RA EY+
Sbjct: 219 IMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV--- 275
Query: 383 EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT--YNVLISAMFV 440
K + ++ ++ F G+IEK + +FE LP D+ ++ +I + V
Sbjct: 276 VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG--------LPETDSLSWSSIIKGLAV 327
Query: 441 RKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
+ A +M+ GF+PR TF VL+ + G E EI
Sbjct: 328 HGHAHK---AMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 131/306 (42%), Gaps = 17/306 (5%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L YA G A R+F M G R D+ S+ +++ CK VE A +F R
Sbjct: 158 LVHMYANCGFIAAAGRIFGQM---GFR-DVVSWTSMVAGYCKCGMVENAREMFDEMPHR- 212
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
+ +++I+ NG+ A+ + + M G+ +++ L
Sbjct: 213 --NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 273 FFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLC 332
+ + K ++++ T +V F G+++K+ VF+ + + +++++I+ L
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL----SWSSIIKGLA 326
Query: 333 KKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK-HGIRPSV 391
A+ F +M+ G +P T+ V+ H G +E+ +E M+K HGI P +
Sbjct: 327 VHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRL 386
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
+ Y ++ AG++ + + KM PN L+ A + K +E G
Sbjct: 387 EHYGCIVDMLGRAGKLAEAENFILKM-----HVKPNAPILGALLGACKIYKNTEVAERVG 441
Query: 452 KLLIEM 457
+LI++
Sbjct: 442 NMLIKV 447
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 135/317 (42%), Gaps = 22/317 (6%)
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMAL 236
G + D+ N+++ + + A +F R D VS+ + G+C A
Sbjct: 147 GFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR---DVVSWTSMVAGYCKCGMVENAR 203
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
++ EM R + T++ ++ GY + + +A + F MK+ + +++
Sbjct: 204 EMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
G ++ +R ++ +V++ + ++ AL+ + + ++ A+ VFE + P
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL------PET 313
Query: 357 N--TYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMF 414
+ +++ +I+GL G +A+ Y +M G P T+ V+ G +EKGL ++
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 415 EKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLN 474
E M P L+ Y ++ + ++ L A +++M + P +L
Sbjct: 374 ENMKKDH-GIEPRLEHYGCIVDML---GRAGKLAEAENFILKMHVK---PNAPILGALLG 426
Query: 475 GLALTGNQEFAKEILRM 491
+ N E A+ + M
Sbjct: 427 ACKIYKNTEVAERVGNM 443
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 182/441 (41%), Gaps = 29/441 (6%)
Query: 78 PELVDEVLKRLWNHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAAR-MRDYTTAWTLVS 136
P L + R N +L+ K L+ P +PS E ++A +R T ++S
Sbjct: 29 PSLFRQSRSRKLNISCSSLKQPKTLEEEPITTKTPSLSEQLKPLSATTLRQEQTQ--ILS 86
Query: 137 RMRSLRRGPTPRAFAILA----ERYAAAGKPH-RAVRVFISMHEHGCRQDLNSFNTILD- 190
+ +S+ PT ++L+ +R A + P + +R F + + F ++LD
Sbjct: 87 KPKSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDE 146
Query: 191 ------------VLCKTKRVEMAHSLFKTFRGR--FRCDSVSYNIIANGWCLIKRTPMAL 236
VL + + H+ F + + F +++ YN+ ++ +
Sbjct: 147 IPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIE 206
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
++ EM + G+ +TY+T++ RC+ +A E+F M K D VTY+ ++ +
Sbjct: 207 EMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVY 266
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
+G+V++ +++ V G P ++ L ++ + V +EM PN+
Sbjct: 267 SKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNV 326
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
YN ++ + +G A M + G+ P+ +T +++ + A L ++E+
Sbjct: 327 VVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEE 386
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDR-GFLPRKFTFNRVLNG 475
M + YN L++ E+ A +L +M + P F++ +LN
Sbjct: 387 MKAKKWPM--DFILYNTLLNMCADIGLEEE---AERLFNDMKESVQCRPDNFSYTAMLNI 441
Query: 476 LALTGNQEFAKEILRMQSRCG 496
G E A E+ + G
Sbjct: 442 YGSGGKAEKAMELFEEMLKAG 462
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 133/296 (44%), Gaps = 6/296 (2%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
KA+++F+ + + + + +D+ ++ +L R + P AF++L
Sbjct: 239 KAIEWFERMYKT-GLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLF-KTFRGRF 212
+ + AG V M + ++ +NT+L+ + + + +A SLF +
Sbjct: 298 GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 213 RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWE 272
+ + + + + ALQ+ +EM + + YNTLL EA
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAER 417
Query: 273 FFLEMKKR-KCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F +MK+ +C D +YT M++ +G G+ +K+ +F+EM++AG+ +V L+Q L
Sbjct: 418 LFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 332 CKKDCVQNALLVFEEMVGKGCVPN--LNTYNVVIRGLCHSG-DMERAVEYMGRMEK 384
K + + + VF+ + +G P+ L + + LC S D E+ + + R K
Sbjct: 478 GKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANK 533
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 119/278 (42%), Gaps = 2/278 (0%)
Query: 115 FEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMH 174
+ I A R Y A RM P ++ + + Y+ +GK + ++
Sbjct: 224 YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 175 EHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG-RFRCDSVSYNIIANGWCLIKRTP 233
G + D +F+ + + + + + + + + + V YN + +
Sbjct: 284 ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPG 343
Query: 234 MALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMV 293
+A + EM E G++P T L+K Y + R+A + + EMK +K +D + Y T++
Sbjct: 344 LARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL 403
Query: 294 HGFGVAGEVKKSKRVFDEMVRA-GLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC 352
+ G ++++R+F++M + P +Y A++ + + A+ +FEEM+ G
Sbjct: 404 NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Query: 353 VPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPS 390
N+ +++ L + ++ V K G++P
Sbjct: 464 QVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 42/271 (15%)
Query: 181 DLNSFN--TILDVLCKTKRVEMAHSLFKTFRGRFRCDSV-SYNIIANGWCLIKRTPMALQ 237
D +SF +++D+ KT +++ A +F+ R + +S+ +N++ NG+C K MA
Sbjct: 158 DCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATT 217
Query: 238 VLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+ + M ER +++TL+KGY +L A + F M ++ +VV++TT+++GF
Sbjct: 218 LFRSMPERNSG----SWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFS 269
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLV----------FEEM 347
G+ + + + EM+ GL P+ T A++ K + + + + +
Sbjct: 270 QTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRA 329
Query: 348 VGKGCV----------------PNLN-----TYNVVIRGLCHSGDMERAVEYMGRMEKHG 386
+G V N+N ++ +I+G G +A++ +M G
Sbjct: 330 IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG 389
Query: 387 IRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+P + V+ ++ E++ GL+ F+ M
Sbjct: 390 EKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 38/314 (12%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRF 212
L + YA G+ A +VF + ++ + +N +++ C+ K + MA +LF++ R
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN 226
Query: 213 R----------CDS------------------VSYNIIANGWCLIKRTPMALQVLKEMAE 244
DS VS+ + NG+ A+ EM E
Sbjct: 227 SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE 286
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
+G+ P T +L + L + ++D T +V + GE+
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
+ VF M ++ ++ A+IQ A+ F +M+ G P+ + V+
Sbjct: 347 AATVFSNMNHKDIL----SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLT 402
Query: 365 GLCHSGDMERAVEYMGRME-KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCS 423
+S +++ + + M + I P+++ Y +V+ AG++ + + E M
Sbjct: 403 ACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM-----P 457
Query: 424 CLPNLDTYNVLISA 437
P+L T+ L A
Sbjct: 458 INPDLTTWAALYRA 471
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 181 DLNSF--NTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQV 238
D N + N++L++ K + + A S+F R + DS S+NI+ +G+ +R AL++
Sbjct: 73 DSNGYICNSVLNMYAKCRLLADAESVF---RDHAKLDSASFNIMVDGYVRSRRLWDALKL 129
Query: 239 LKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGV 298
M ER + V+Y TL+KGY + +Q EA E F EM+ ++ VT T++
Sbjct: 130 FDVMPER----SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
G + + + ++ L V L+ + C C+++A +F+EM + NL T
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER----NLVT 241
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
+NV++ G +G +E+A E ++ + I
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKDI 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 145/345 (42%), Gaps = 59/345 (17%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLK 240
D SFN ++D +++R+ A LF R VSY + G+ + A+++ +
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPER---SCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 241 EMAERGISPTMVTYNT-----------------------------------LLKGYFRCH 265
EM GI VT T LL Y C
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 266 QLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYN 325
L++A + F EM +R ++VT+ M++G+ AG +++++ +FD++ +V ++
Sbjct: 223 CLKDARKLFDEMPER----NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV----SWG 274
Query: 326 ALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKH 385
+I +K+ + AL+ + EM+ G P+ ++ S + ++ G + K
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
Query: 386 GIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSE 445
G +I ++ + +I+ L FE S ++ + N LI A FV+
Sbjct: 335 GFDCYDFLQATIIHFYAVSNDIKLALQQFEA------SVKDHIASRNALI-AGFVKNG-- 385
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILR 490
+V + E+ D+ F++N +++G A + + + A + R
Sbjct: 386 -MVEQAR---EVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFR 426
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM-KKRKCEIDVVTYTTMVHGFGV 298
+E+ ++ + ++N ++ GY + + A F EM + + D +T ++
Sbjct: 391 REVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISS 450
Query: 299 AGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNT 358
G +++ KR D + + + P+ A+I + K ++ AL +F + ++
Sbjct: 451 LGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISS-STISP 509
Query: 359 YNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+N +I G G + A++ ++ I+P+ T+ V+ C AG +E G + FE M
Sbjct: 510 WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESM 568
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 102/253 (40%), Gaps = 6/253 (2%)
Query: 167 VRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGW 226
+++ + E + + S N ++ K VE A +F + D S+N + +G+
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK---DIFSWNAMISGY 412
Query: 227 CLIKRTPMALQVLKEM-AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEID 285
+AL + +EM + + P +T ++ L E + +
Sbjct: 413 AQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPN 472
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
++ + G ++ + +F + +++ +NA+I + AL ++
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNIS-SSTISPWNAIICGSATHGHAKLALDLYS 531
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK-HGIRPSVQTYNVVIRYFCDA 404
++ PN T+ V+ CH+G +E Y M+ HGI P ++ Y ++ A
Sbjct: 532 DLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKA 591
Query: 405 GEIEKGLSMFEKM 417
G +E+ M +KM
Sbjct: 592 GRLEEAKEMIKKM 604
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 123/290 (42%), Gaps = 3/290 (1%)
Query: 90 NHGPKALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRA 149
N+ + L+ + P Y F A+ AR + + L+ + P +
Sbjct: 53 NNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSES 112
Query: 150 FAILAE-RYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF 208
FA+ A Y A R+++ F ++ ++ + + S N +L K + A+ ++
Sbjct: 113 FAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEM 172
Query: 209 RGRF--RCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQ 266
+ D +YN + C T + ++ EM + I PT ++ ++ G+++ +
Sbjct: 173 PKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEK 232
Query: 267 LREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNA 326
E + M + + V TY M+ + ++K + D ++ + P+ TY+
Sbjct: 233 FDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSL 292
Query: 327 LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAV 376
LI C ++ + A+ +FE MV G P+ Y +I LC GD E A+
Sbjct: 293 LIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 149/363 (41%), Gaps = 17/363 (4%)
Query: 135 VSRMRS-LRRGPTPRAFAI--LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV 191
+S RS LR G +P AF+ + + A+ P ++ + + GC + ++ +
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM 97
Query: 192 LCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTM 251
CK V A +F+ + SV YN + +G+ + A + + M E G+S
Sbjct: 98 YCKCGLVADARKVFEENPQSSQL-SVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 252 VTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDE 311
VT L+ L + K + +V + + + G V+ +R+FDE
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 312 MVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGD 371
M GL+ T+NA+I + + L ++E+M G P+ T V+ H G
Sbjct: 217 MPVKGLI----TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 372 MERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTY 431
+ E +E +G P+V N I + G + K ++F+ M + +L ++
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP------VKSLVSW 326
Query: 432 NVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEILRM 491
+I + E + L +M+ RG P F VL+ + +G + E+ R
Sbjct: 327 TAMIGCYGMHGMGE---IGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRA 383
Query: 492 QSR 494
R
Sbjct: 384 MKR 386
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 144/313 (46%), Gaps = 30/313 (9%)
Query: 126 RDYTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSF 185
+ Y T + VS +RS R P F + + G + + S+ + G + +
Sbjct: 463 KGYETLFLFVSMLRS-RIEPDEFTFGSIL-KACTGGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 186 NTILDVLCKTKRVEMA---HSLF--------------KTFRGRFRCDSVSYNIIANGWCL 228
+++D+ K +E A HS F K R + VS+N I +G+ +
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 229 IKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW---EFFLEMKKRKCEID 285
+++ A + M E GI+P TY T+L C L A + ++ K++ + D
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLD---TCANLASAGLGKQIHAQVIKKELQSD 637
Query: 286 VVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFE 345
V +T+V + G++ S+ +F++ +R V T+NA+I + A+ +FE
Sbjct: 638 VYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV----TWNAMICGYAHHGKGEEAIQLFE 693
Query: 346 EMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEK-HGIRPSVQTYNVVIRYFCDA 404
M+ + PN T+ ++R H G +++ +EY M++ +G+ P + Y+ ++ +
Sbjct: 694 RMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKS 753
Query: 405 GEIEKGLSMFEKM 417
G++++ L + +M
Sbjct: 754 GKVKRALELIREM 766
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 149/378 (39%), Gaps = 33/378 (8%)
Query: 129 TTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTI 188
+ A M+ + G + +A + AA + +R+ +H H + D + +
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE----LRLGGQLHAHALKSDFAADGIV 318
Query: 189 ----LDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
LD+ K ++ A LF R SYN + G+ + AL + +
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNR---QSYNAMITGYSQEEHGFKALLLFHRLMS 375
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
G+ ++ + + + L E + + K +DV + +G + +
Sbjct: 376 SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAE 435
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
+ RVFDEM R V ++NA+I + L +F M+ P+ T+ +++
Sbjct: 436 AFRVFDEMRRRDAV----SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSM----FEKMG-D 419
C G + +E + K G+ + +I + G IE+ + F++
Sbjct: 492 A-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 420 GSCSCLPNLD---------TYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFN 470
G+ L + ++N +IS ++++SED A L M++ G P KFT+
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSED---AQMLFTRMMEMGITPDKFTYA 607
Query: 471 RVLNGLALTGNQEFAKEI 488
VL+ A + K+I
Sbjct: 608 TVLDTCANLASAGLGKQI 625
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 129/338 (38%), Gaps = 34/338 (10%)
Query: 177 GCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMAL 236
GC D+ + + +LD+ K KR SL + F+G +SVS++ I G +AL
Sbjct: 210 GCDTDVVAASALLDMYAKGKR--FVESL-RVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 237 QVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGF 296
+ KEM + + Y ++L+ +LR + K D + T + +
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 297 GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL 356
++ ++ +FD + +YNA+I +++ ALL+F ++ G +
Sbjct: 327 AKCDNMQDAQILFDNSENL----NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
+ + V R + ++ G K + V N I + + + +F++
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL 476
M + ++N +I+A K + + L + M+ P +FTF +L
Sbjct: 443 MRR------RDAVSWNAIIAAHEQNGKGYETLF---LFVSMLRSRIEPDEFTFGSILKAC 493
Query: 477 ------------------ALTGNQEFAKEILRMQSRCG 496
+ N ++ M S+CG
Sbjct: 494 TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 531
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 11/226 (4%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
N +L V ++ A +F R D VS+N + NG+ A M
Sbjct: 86 LNCLLQVYTNSRDFVSASMVFDKMPLR---DVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
R + V++N++L GY + + ++ E F++M + E D T+ ++ +
Sbjct: 143 RDV----VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSL 198
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
++ +VR G V +AL+ + K +L VF+ + K V +++ +I
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV----SWSAIIA 254
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKG 410
G + + A+++ M+K S Y V+R E+ G
Sbjct: 255 GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 152/359 (42%), Gaps = 25/359 (6%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P + L YA+ G A+ V M G + +S +++L + + +++ ++
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 205 FK-TFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
R + D + + + P A V M + I V +N+L+ G
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI----VAWNSLVSGLSY 303
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
L++A + M+K + D +T+ ++ G+ G+ +K+ V +M G+ P+V +
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR-----GLCHSGDMERAVEY 378
+ A+ K +NAL VF +M +G PN T + +++ L HSG E
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK-----EV 418
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
G + + ++ + +G+++ + +F + + S L ++N ++
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKS------LASWNCMLMGY 472
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG-NQEFAKEILRMQSRCG 496
+ + E+ + A +++E G P TF VL+ +G QE K M+SR G
Sbjct: 473 AMFGRGEEGIAAFSVMLE---AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 183 NSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEM 242
NS + L C K E + + + + D++++N +A+G+ + + AL V+ +M
Sbjct: 295 NSLVSGLSYACLLKDAEAL--MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 243 AERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEV 302
E+G++P +V++ + G + R A + F++M++ + T +T++ G +
Sbjct: 353 KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLL 412
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
K V +R L+ AL+ + K +Q+A+ +F + K +L ++N +
Sbjct: 413 HSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWNCM 468
Query: 363 IRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD--- 419
+ G G E + M + G+ P T+ V+ ++G +++G F+ M
Sbjct: 469 LMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 420 -----GSCSCLPNL 428
CSC+ +L
Sbjct: 529 IIPTIEHCSCMVDL 542
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 135/314 (42%), Gaps = 19/314 (6%)
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFK--TFRGRFRCDSVSYNIIANGWCLIKRT-PMA 235
R DL ++N I+ V ++ E A LF+ F G DS ++ C K
Sbjct: 52 RDDL-AWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV--CSNKEGFAEG 108
Query: 236 LQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
Q+ + G+ + N+L+ Y R +L + + F MK R ++ ++ +++
Sbjct: 109 RQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSS 164
Query: 296 FGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPN 355
+ G V + + DEM GL P + T+N+L+ K ++A+ V + M G P+
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 356 LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFE 415
++ + +++ + G ++ G + ++ + V +I + G + +F+
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
M N+ +N L+S + +D A L+I M G P T+N + +G
Sbjct: 285 MMD------AKNIVAWNSLVSGLSYACLLKD---AEALMIRMEKEGIKPDAITWNSLASG 335
Query: 476 LALTGNQEFAKEIL 489
A G E A +++
Sbjct: 336 YATLGKPEKALDVI 349
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 144/340 (42%), Gaps = 45/340 (13%)
Query: 188 ILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGI 247
++D + + + + + + R D V YN + N K+ A VL+++ +RG
Sbjct: 565 VIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQ 624
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
P+ VTY +++ C + EFF +M+K + + Y +V+ G+ ++
Sbjct: 625 KPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVH 683
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV----- 362
++M G+V S A Y L + LC G+ C LN N V
Sbjct: 684 TVEDMESRGIVGSAALYYDLARCLCS--------------AGR-CNEGLNMVNFVNPVVL 728
Query: 363 --IRGLCHSGDMERAVEY-MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGD 419
I L + D+ +++ + ++ + +P V TY +I+ D+G I+ +F++M
Sbjct: 729 KLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKK 788
Query: 420 GSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG------------FLPRKF 467
C PNL T N+++ A E+ A +L +M + G LP +
Sbjct: 789 ---VCSPNLVTCNIMLKAYLQGGLFEE---ARELFQKMSEDGNHIKNSSDFESRVLPDTY 842
Query: 468 TFNRVLNGLALTGNQEFAKEILRMQSRCGH---ALRHLKL 504
TFN +L+ A + R R G+ A RHL++
Sbjct: 843 TFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRM 882
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 33/320 (10%)
Query: 180 QDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVL 239
+D+ + ++ LC+ RV+ A +F R R + V++ + G+ R +A ++
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRER---NVVTWTTMITGYRQNNRVDVARKLF 226
Query: 240 KEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVA 299
+ M E+ T V++ ++L GY ++ +A EFF M + V+ M+ GFG
Sbjct: 227 EVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP----VIACNAMIVGFGEV 278
Query: 300 GEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTY 359
GE+ K++RVFD M AT+ +I+ +K AL +F +M +G P+ +
Sbjct: 279 GEISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 360 NVVIRGLCHSGDMERAVEYMGRMEKHGIR----PSVQTYNVVIRYFCDAGEIEKGLSMFE 415
+ I +C + +++Y ++ H +R V +V++ + GE+ K +F+
Sbjct: 335 -ISILSVCAT---LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 416 KMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNG 475
+ ++ +N +IS E+ A K+ EM G +P K T +L
Sbjct: 391 RFSS------KDIIMWNSIISGYASHGLGEE---ALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 476 LALTGNQEFAKEILR-MQSR 494
+ G E EI M+S+
Sbjct: 442 CSYAGKLEEGLEIFESMESK 461
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 153/367 (41%), Gaps = 59/367 (16%)
Query: 156 RYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCD 215
R + GK + A + F S+ + + S+N+I+ + A LF R +
Sbjct: 26 RLSRIGKINEARKFFDSLQ----FKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER---N 78
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
VS+N + +G+ + A V + M ER + V++ ++KGY + + EA F
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFW 134
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
M +R + V++T M G G + K+++++D M V V +I LC++
Sbjct: 135 RMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLCREG 186
Query: 336 CVQNALLVFEEMVGKGCVPNLN---------------------------TYNVVIRGLCH 368
V A L+F+EM + V ++ ++ G
Sbjct: 187 RVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL 246
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
SG +E A E+ E ++P + N +I F + GEI K +F+ M D +
Sbjct: 247 SGRIEDAEEF---FEVMPMKPVIAC-NAMIVGFGEVGEISKARRVFDLMEDRDNA----- 297
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
T+ +I A + RK E + A L +M +G P + +L+ A + ++ +++
Sbjct: 298 -TWRGMIKA-YERKGFE--LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 489 LRMQSRC 495
RC
Sbjct: 354 HAHLVRC 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 255 NTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVR 314
+ L+ Y +C +L +A F R D++ + +++ G+ G +++ ++F EM
Sbjct: 370 SVLMTMYVKCGELVKAKLVF----DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 315 AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCV-PNLNTYNVVIRGLCHSGDME 373
+G +P+ T A++ ++ L +FE M K CV P + Y+ + L +G ++
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVD 485
Query: 374 RAVEYMGRMEKHGIRPSVQTYNVVI-----RYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
+A+E +E I+P + ++ D E+ +FE D N
Sbjct: 486 KAMEL---IESMTIKPDATVWGALLGACKTHSRLDLAEV-AAKKLFENEPD-------NA 534
Query: 429 DTYNVLISAMFVRKKSEDLVVAGK 452
TY +L S R K D+ V K
Sbjct: 535 GTYVLLSSINASRSKWGDVAVVRK 558
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 150/371 (40%), Gaps = 38/371 (10%)
Query: 126 RDYTTAWTLVSRM--------------RSLRRGPTPRAFAILAERYAAAGKPHRAVRVFI 171
RD+ T TL+S + LR G +P F + + AAA A R
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA-----AERRGC 178
Query: 172 SMHE-HG----CRQDLNSF--NTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIAN 224
H+ HG C D N + +LD+ + ++ A +F R + VS+N +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR---NDVSWNALIA 235
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
G T AL++ + M G P+ +Y +L L + M K ++
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
T++ + +G + ++++FD + + +V ++N+L+ + + A+ F
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV----SWNSLLTAYAQHGFGKEAVWWF 351
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
EEM G PN ++ V+ HSG ++ Y M+K GI P Y V+ A
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G++ + L E+M P + L++A + K +E A + + E+ P
Sbjct: 412 GDLNRALRFIEEM-----PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 465 RKFTFNRVLNG 475
+N +G
Sbjct: 467 HVILYNIYASG 477
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 18/261 (6%)
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
FR D V N + N + A +V ++M +R VT+ TL+ GY + + +A
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDAL 146
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
FF +M + + T ++++ ++ V+ G +V +AL+ +
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
+ + +A LVF+ + + V ++N +I G E+A+E M + G RPS
Sbjct: 207 TRYGLMDDAQLVFDALESRNDV----SWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 392 QTYNVVIRYFCDAGEIEKGL---SMFEKMGDGSCSCLPN--LDTYNVLIS-----AMFVR 441
+Y + G +E+G + K G+ + N LD Y S +F R
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 442 KKSEDLVVAGKLLIEMVDRGF 462
D+V LL GF
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGF 343
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 23/335 (6%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG--RFRC 214
Y A +VF M E +D+ S+N+++ ++ E ++K F+
Sbjct: 177 YTKCDNIESARKVFDEMSE----RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKP 232
Query: 215 DSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFF 274
+ V+ + L+V K+M E I + N ++ Y +C L A F
Sbjct: 233 NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALF 292
Query: 275 LEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKK 334
EM ++ D VTY ++ G+ G VK++ +F EM GL +T+NA+I L +
Sbjct: 293 DEMSEK----DSVTYGAIISGYMAHGLVKEAMALFSEMESIGL----STWNAMISGLMQN 344
Query: 335 DCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
+ + + F EM+ G PN T + ++ L +S +++ E ++G ++
Sbjct: 345 NHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVT 404
Query: 395 NVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 454
+I + G + +F+ D S L + +I+A V S+ A L
Sbjct: 405 TSIIDNYAKLGFLLGAQRVFDNCKDRS------LIAWTAIITAYAVHGDSDS---ACSLF 455
Query: 455 IEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL 489
+M G P T VL+ A +G+ + A+ I
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIF 490
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
+A QV + G + N ++ Y +C + A + F EM +R DVV++ +M
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER----DVVSWNSM 204
Query: 293 VHGFGVAGEVKKSKRVFDEMVR-AGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
+ G+ +G + K+++ M+ + P+ T ++ Q C Q++ L+F V K
Sbjct: 205 ISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQA-----CGQSSDLIFGLEVHKK 259
Query: 352 CVPN-----LNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGE 406
+ N L+ N VI G ++ A M + + SV TY +I + G
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE---KDSV-TYGAIISGYMAHGL 315
Query: 407 IEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRK 466
+++ +++F +M L T+N +IS + E+++ + + EM+ G P
Sbjct: 316 VKEAMALFSEMES------IGLSTWNAMISGLMQNNHHEEVINSFR---EMIRCGSRPNT 366
Query: 467 FTFNRVLNGLALTGNQEFAKEILRMQSRCG 496
T + +L L + N + KEI R G
Sbjct: 367 VTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 107/277 (38%), Gaps = 39/277 (14%)
Query: 173 MHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRT 232
M E+ + DL+ N ++ K ++ A +LF + DSV+Y I +G+
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK---DSVTYGAIISGYMAHGLV 316
Query: 233 PMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTM 292
A+ + EM G+S T+N ++ G + + E F EM + + VT +++
Sbjct: 317 KEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSL 372
Query: 293 ---------------VHGF----GVAGEVKKSKRVFDEMVRAGLV------------PSV 321
+H F G + + + D + G + S+
Sbjct: 373 LPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSL 432
Query: 322 ATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGR 381
+ A+I +A +F++M G P+ T V+ HSGD + A
Sbjct: 433 IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDS 492
Query: 382 M-EKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
M K+ I P V+ Y ++ AG++ + KM
Sbjct: 493 MLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 132/316 (41%), Gaps = 40/316 (12%)
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRC--DSV 217
+G+P+RA ++F M E G + + +L ++ ++ A S+ + +C D
Sbjct: 137 SGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVF 196
Query: 218 SYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEM 277
+Y+ + + + + KEM ER I+P VT N +L GY R + + + +M
Sbjct: 197 TYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
Query: 278 -KKRKCEIDVVTYTTMVHGFGVAGEVK----------------------------KSKRV 308
C+ DV T ++ FG G++ KR+
Sbjct: 257 LVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRM 316
Query: 309 FDEM------VRAGLVP-SVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+D+M +R P + +TYN +I+ +N L F++M +G + T+
Sbjct: 317 YDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCC 376
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGS 421
+I G ++G + + + K I + YN VI A ++ + ++ +M +
Sbjct: 377 LINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQ 436
Query: 422 CSCLPNLDTYNVLISA 437
C C + T+ +++ A
Sbjct: 437 CVC--DSRTFEIMVEA 450
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 120/273 (43%), Gaps = 11/273 (4%)
Query: 150 FAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFR 209
+ I+ A +G+ A+ V M + G + ++ ++ + + V + LFK
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 210 GR------FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFR 263
G+ C V + G L+V+ M + + T ++ G+ +
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREG-----NMETTLEVVAAMRKAELKVTDCILCAIVNGFSK 365
Query: 264 CHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVAT 323
EA + + K +CE VTY ++ + + K++ +FDEMV+ G V
Sbjct: 366 QRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVA 425
Query: 324 YNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRME 383
Y+ ++ + K + +A+ + +M +GC PN+ YN +I + D+ RA + M+
Sbjct: 426 YSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK 485
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
+ + P +Y +I + + E+E+ + ++++
Sbjct: 486 RAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 140/326 (42%), Gaps = 20/326 (6%)
Query: 124 RMRDYTTAWTLVSRMR-SLRRGPTPRAFAILAERYAAAGKPHRAVRVFISMHEHG----C 178
+++ Y++ + R++ S+ P+P + + E + G+ H+ V +F
Sbjct: 185 KLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLA 244
Query: 179 RQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVS-YNIIANGWCLIKRTPMALQ 237
++ + + + L K+ R A + + + + +S Y+++ + + + +
Sbjct: 245 KESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEK 304
Query: 238 VLKEMAERGI--SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHG 295
+ KE + + P M L+ Y R + E M+K + ++ +V+G
Sbjct: 305 LFKEAGGKKLLKDPEMCLKVVLM--YVREGNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 296 F----GVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKG 351
F G A VK + E AG V TY I C+ + A ++F+EMV KG
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQV----TYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 352 CVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGL 411
+ Y+ ++ + + AV M +M++ G +P++ YN +I A ++ +
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 412 SMFEKMGDGSCSCLPNLDTYNVLISA 437
++++M LP+ +Y +ISA
Sbjct: 479 KIWKEMKRA--KVLPDKVSYTSMISA 502
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 20/289 (6%)
Query: 184 SFNTILDVLCKTKRVEMAHSLFKTF--RGRFRCDSVSYNIIANGWCLIKRTPMALQVLKE 241
S+N I++ C V+ A +++ F SV+Y + G R A +L+E
Sbjct: 218 SYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLRE 277
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M +G + YN L++GY +A EFF E+K + D + T + + G
Sbjct: 278 MLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGN 337
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNL----- 356
K++ + ++ T N L++V K A +F EM+ PN+
Sbjct: 338 DKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNS 397
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRM-EKHGIRPSVQTY----NVVIRYFCDAGEIEKGL 411
+T +++ G+ A+ ++ K +P V Y N+V R FC+ G + +
Sbjct: 398 DTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR-FCEQGMLTEAE 456
Query: 412 SMFEKMGDGSCSCLP-NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVD 459
F +G LP + ++ +I A ++ +D V K+L MVD
Sbjct: 457 RFF---AEGVSRSLPADAPSHRAMIDAYLKAERIDDAV---KMLDRMVD 499
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 113/276 (40%), Gaps = 15/276 (5%)
Query: 151 AILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRG 210
A E + G A+ + S+ + R + N +L+V K + + A +LF
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 211 R------FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMV----TYNTLLKG 260
+S + I+ N + A+ K++ + S V Y ++
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445
Query: 261 YFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS 320
+ L EA FF E R D ++ M+ + A + + ++ D MV L
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLR-V 504
Query: 321 VATYNA-LIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYM 379
VA + A + L K + + V +M + P+ + Y+VV+RGLC +++A + +
Sbjct: 505 VADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIV 564
Query: 380 GRMEKHGIRPSVQTYNVVIRYFCDAG---EIEKGLS 412
G M +H + + +I F AG EIEK L+
Sbjct: 565 GEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILN 600
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 314 RAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGC-VPNLNTYNVVIRGLCHSGDM 372
++ +VP+V +YN +I C + V AL V+ ++ P+ TY + +GL +G +
Sbjct: 209 QSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRI 268
Query: 373 ERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYN 432
A + M G YN +IR + D G+ +K + F+++ C+ Y+
Sbjct: 269 GDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDEL-KSKCTV------YD 321
Query: 433 VLISAMFV 440
+++A F+
Sbjct: 322 GIVNATFM 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 131/337 (38%), Gaps = 16/337 (4%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEH---AIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAF 150
+AL+ ++H+ + + S + H + A R+ D A +L+ M S + +
Sbjct: 234 EALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGD---AASLLREMLSKGQAADSTVY 290
Query: 151 AILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDV-LCKTKRVEMAHSLFKTFR 209
L Y G +AV F + D T ++ K E S
Sbjct: 291 NNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLD 350
Query: 210 GRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGY-----FRC 264
+FR + N++ + + A + EM + P +++ N+ G F+
Sbjct: 351 KKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKM 410
Query: 265 HQLREAWEFFLEMKKRKCE----IDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPS 320
+ EA F ++ + +D + Y +V F G + +++R F E V L
Sbjct: 411 GEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPAD 470
Query: 321 VATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMG 380
++ A+I K + + +A+ + + MV + V L +G + + E +
Sbjct: 471 APSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLT 530
Query: 381 RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+M + +P Y+VV+R CD +++ + +M
Sbjct: 531 KMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEM 567
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 180/427 (42%), Gaps = 64/427 (14%)
Query: 99 FKHLDRHPTYI----HSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAILA 154
+ H +R +++ +SP H + + R+ TT+ S SLRR RA +I
Sbjct: 6 YLHCNRSKSFLFQRFYSPYRIAHKLFDGSSQRNATTSINH-SISESLRRNSPARALSIFK 64
Query: 155 ERYAAAGKPHRAVRVFISMHEHGCRQDL---------------NSF----NTILDVLCKT 195
E V + + CR DL SF N ++ + K
Sbjct: 65 ENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKA 124
Query: 196 KRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYN 255
R + A +F+ D VS+N I +G+ +AL + M G+ TY+
Sbjct: 125 GRFDNALCIFENL---VDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYS 178
Query: 256 TLL------KGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVF 309
T L +G+ QL+ + K E D+V + + + +G + ++RVF
Sbjct: 179 TALSFCVGSEGFLLGLQLQST------VVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 310 DEMVRAGLVPSVATYNALIQVLCKKDCVQ-NALLVFEEMVGKGCVPNLNTYNVVIRGLCH 368
DEM ++ ++N+L+ L ++ A+++F +M+ +G + ++ VI CH
Sbjct: 233 DEMSFKDMI----SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Query: 369 SGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNL 428
D++ A + G K G ++ N+++ + G +E S+F +M + N+
Sbjct: 289 ETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSE------RNV 342
Query: 429 DTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
++ +IS+ +D V + + M G P + TF ++N A+ N++ KE
Sbjct: 343 VSWTTMISS-----NKDDAV---SIFLNMRFDGVYPNEVTFVGLIN--AVKCNEQI-KEG 391
Query: 489 LRMQSRC 495
L++ C
Sbjct: 392 LKIHGLC 398
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 169/410 (41%), Gaps = 86/410 (20%)
Query: 124 RMRDYTTAWTLVSRMRSLRRGPTPR---AFAILAERYAAAGKPHRAVRVFISMHEHGCRQ 180
+ R AWTL M P+ ++ ++ G+ AV +F M E +
Sbjct: 120 KCRRMNEAWTLFREM--------PKNVVSWTVMLTALCDDGRSEDAVELFDEMPE----R 167
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLK 240
++ S+NT++ L + +E A +F R D VS+N + G+ A +
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR---DVVSWNAMIKGYIENDGMEEAKLLFG 224
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
+M+E+ + VT+ +++ GY R +REA+ F EM +R ++V++T M+ GF
Sbjct: 225 DMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNE 276
Query: 301 EVKKSKRVFDEMVRA--GLVPSVATY---------------------------------- 324
+++ +F EM + + P+ T
Sbjct: 277 LYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVD 336
Query: 325 ------NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEY 378
+L+ + + +A + E +L + N++I +GD+ERA
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESF------DLQSCNIIINRYLKNGDLERAETL 390
Query: 379 MGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAM 438
R++ + S + +I + +AG++ + +F+K+ D + T+ V+IS +
Sbjct: 391 FERVKSLHDKVS---WTSMIDGYLEAGDVSRAFGLFQKLHD------KDGVTWTVMISGL 441
Query: 439 FVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI 488
++E A LL +MV G P T++ +L+ T N + K I
Sbjct: 442 V---QNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 19/288 (6%)
Query: 128 YTTAWTLVSRMRSLRRGPTPRAFAILAERYAAAGKPHRAVRVF---ISMHEHGCRQDLNS 184
Y ++ + S L ++ I+ RY G RA +F S+H D S
Sbjct: 349 YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH------DKVS 402
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
+ +++D + V A LF+ + D V++ ++ +G + A +L +M
Sbjct: 403 WTSMIDGYLEAGDVSRAFGLFQKLHDK---DGVTWTVMISGLVQNELFAEAASLLSDMVR 459
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKC--EIDVVTYTTMVHGFGVAGEV 302
G+ P TY+ LL L + + K + D++ ++V + G +
Sbjct: 460 CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAI 519
Query: 303 KKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVV 362
+ + +F +MV+ V ++N++I L AL +F+EM+ G PN T+ V
Sbjct: 520 EDAYEIFAKMVQKDTV----SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGV 575
Query: 363 IRGLCHSGDMERAVEYMGRM-EKHGIRPSVQTYNVVIRYFCDAGEIEK 409
+ HSG + R +E M E + I+P + Y +I AG++++
Sbjct: 576 LSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 242 MAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 301
M ER I VT N +L GY +C ++ EAW F EM K +VV++T M+ G
Sbjct: 103 MPERNI----VTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGR 153
Query: 302 VKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNV 361
+ + +FDEM +V ++N L+ L + ++ A VF+ M + V ++N
Sbjct: 154 SEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV----SWNA 205
Query: 362 VIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKM 417
+I+G + ME A G M + +V T+ ++ +C G++ + +F +M
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 120/261 (45%), Gaps = 10/261 (3%)
Query: 247 ISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSK 306
+ P +V YN +L Q + F+E++K + TY + +G+ +
Sbjct: 337 LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVH 396
Query: 307 RVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGL 366
F +M +G P TY L++ L ++ ++ A+ +M KG + + Y + L
Sbjct: 397 DFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCL 456
Query: 367 CHSGDMERAVEYMGRMEK-HGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCL 425
C++G A+ +GRM++ RP T+ +I + G ++ +++F+ M D C
Sbjct: 457 CNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKD---KCD 513
Query: 426 PNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRG---FLPRKFTFNRVLNGLALTGNQ 482
PN+ T N+++ V +++ A +L E+V R +P ++T++ +L A +
Sbjct: 514 PNIGTANMMLK---VYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQW 570
Query: 483 EFAKEILRMQSRCGHALRHLK 503
E+ + + + G+ + K
Sbjct: 571 EYFEHVYQTMVLSGYQMDQTK 591
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 278 KKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMV-RAGLVPSVATYNALIQVLCKKDC 336
KKRK YT ++ G A +++ ++F++M+ L P +A Y+ + L +
Sbjct: 247 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 306
Query: 337 VQNALLVFEEMVGKGC---------------VPNLNTYNVVIRGLCHSGDMERAVEYM-G 380
++ L V E M K P+L YN ++ C +AV ++
Sbjct: 307 LKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNA-CVPTLQWKAVSWVFV 365
Query: 381 RMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFV 440
+ K+G+RP+ TY + + ++G+ ++ F KM S P TY VL+ A++
Sbjct: 366 ELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKM--KSSGEAPKAITYKVLVRALWR 423
Query: 441 RKKSEDLVVA 450
K E+ V A
Sbjct: 424 EGKIEEAVEA 433
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 23/293 (7%)
Query: 181 DLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLK 240
D S+N +L + E A S F R F+ D+ S+N + G+ A ++
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFD--RMPFK-DAASWNTMITGYARRGEMEKARELFY 179
Query: 241 EMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAG 300
M E+ V++N ++ GY C L +A FF R VV +T M+ G+ A
Sbjct: 180 SMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVR----GVVAWTAMITGYMKAK 231
Query: 301 EVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYN 360
+V+ ++ +F +M + ++ T+NA+I + ++ L +F M+ +G PN + +
Sbjct: 232 KVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 361 VVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDG 420
+ G ++ + + K + V +I +C GE+ +FE M
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK- 347
Query: 421 SCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVL 473
++ +N +IS + + + D + L EM+D P TF VL
Sbjct: 348 -----KDVVAWNAMISG-YAQHGNADKALC--LFREMIDNKIRPDWITFVAVL 392
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 158/382 (41%), Gaps = 31/382 (8%)
Query: 109 IHSPSGFEHAIDIAARMRD--YTTAWTLVSRMRSLRRGPTPRA--FAILAERYAAAGKPH 164
I P F + I ++ +R+ + A + RM P A + + YA G+
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM------PFKDAASWNTMITGYARRGEME 172
Query: 165 RAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIAN 224
+A +F SM E ++ S+N ++ + +E A FK R V++ +
Sbjct: 173 KARELFYSMME----KNEVSWNAMISGYIECGDLEKASHFFKVAPVR---GVVAWTAMIT 225
Query: 225 GWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEI 284
G+ K+ +A + K+M ++ +VT+N ++ GY + + + F M +
Sbjct: 226 GYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 285 DVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVF 344
+ ++ + G ++ +++ + ++ L V +LI + CK + +A +F
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 345 EEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDA 404
E M K V +N +I G G+ ++A+ M + IRP T+ V+ A
Sbjct: 343 EVMKKKDVV----AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 405 GEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLP 464
G + G++ FE M P D Y ++ + K E+ A KL+ M F P
Sbjct: 399 GLVNIGMAYFESMVR-DYKVEPQPDHYTCMVDLLGRAGKLEE---ALKLIRSM---PFRP 451
Query: 465 RKFTFNRVLNGLALTGNQEFAK 486
F +L + N E A+
Sbjct: 452 HAAVFGTLLGACRVHKNVELAE 473
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 185 FNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAE 244
N I+ ++ ++ A +F R + +++++N + G I + P + ++ +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAK---NTITWNSLLIG---ISKDPSRMMEAHQLFD 117
Query: 245 RGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKK 304
P +YN +L Y R +A FF M + D ++ TM+ G+ GE++K
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEK 173
Query: 305 SKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIR 364
++ +F M+ V ++N +I
Sbjct: 174 ARELFYSMMEKNEV---------------------------------------SWNAMIS 194
Query: 365 GLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSC 424
G GD+E+A + G V + +I + A ++E +MF+ M +
Sbjct: 195 GYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDM-----TV 245
Query: 425 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEF 484
NL T+N +IS + ED + KL M++ G P + L G + +
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGL---KLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 485 AKEILRMQSR 494
++I ++ S+
Sbjct: 303 GRQIHQIVSK 312
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 159/363 (43%), Gaps = 23/363 (6%)
Query: 131 AWTLVSRMRSLRRGPTPRAFAILAERYAAAG--KPHRAVRVFISMHEHGCRQDLNSFNTI 188
A +L MR R P LA + G + R+V+ F ++ + +D+ N +
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF-TLRKGWFLEDITIGNAV 390
Query: 189 LDVLCKTKRVEMAHSLFKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERG-I 247
+ + K V+ A ++F D +S+N I +G+ A+++ M E G I
Sbjct: 391 VVMYAKLGLVDSARAVFNWLP---NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 248 SPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKR 307
+ T+ ++L + LR+ + + K +DV T++ +G G ++ +
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 308 VFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLC 367
+F ++ R VP +N LI + A+++F+EM+ +G P+ T+ ++
Sbjct: 508 LFYQIPRVNSVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
Query: 368 HSGDMERAVEYMGRME-KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLP 426
HSG ++ M+ +GI PS++ Y ++ + AG++E L + M S P
Sbjct: 564 HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM-----SLQP 618
Query: 427 NLDTYNVLISAMFVRKKSEDLVVAGKLLIEMVDRGFLPRKFTFNRVLNGL-ALTGNQEFA 485
+ + L+SA V + +A + L E+ P ++ +L+ + A G E
Sbjct: 619 DASIWGALLSACRVHGNVDLGKIASEHLFEVE-----PEHVGYHVLLSNMYASAGKWEGV 673
Query: 486 KEI 488
EI
Sbjct: 674 DEI 676
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 141/335 (42%), Gaps = 42/335 (12%)
Query: 160 AGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFRCDSVSY 219
AG +R V + +HG +L N ++D+ + R+ +F R D +S+
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR---DLISW 316
Query: 220 NIIANGWCLIKRTPMALQVLKEMAERGISP---TMVTYNTLLK--GYFRC------HQLR 268
N I + L ++ A+ + +EM I P T+++ ++L G R LR
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 269 EAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALI 328
+ W FLE D+ +V + G V ++ VF+ + V ++N +I
Sbjct: 377 KGW--FLE--------DITIGNAVVVMYAKLGLVDSARAVFNWLPNT----DVISWNTII 422
Query: 329 QVLCKKDCVQNALLVFEEMVGKGCV-PNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGI 387
+ A+ ++ M +G + N T+ V+ +G + + ++ GR+ K+G+
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 388 RPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDT--YNVLISAMFVRKKSE 445
V + + G +E LS+F + +P +++ +N LI+ E
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQ--------IPRVNSVPWNTLIACHGFHGHGE 534
Query: 446 DLVVAGKLLIEMVDRGFLPRKFTFNRVLNGLALTG 480
V+ L EM+D G P TF +L+ + +G
Sbjct: 535 KAVM---LFKEMLDEGVKPDHITFVTLLSACSHSG 566
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 17/314 (5%)
Query: 145 PTPRAFAILAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSL 204
P+ R L YAA G+ AVR+F SM +D+ S+ +I+ + +++A +
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKA----RDVISWTSIVKGYVERGNLKLARTY 324
Query: 205 FKTFRGRFRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRC 264
F R D +S+ I+ +G+ +L++ +EM G+ P T ++L
Sbjct: 325 FDQMPVR---DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 265 HQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATY 324
L + K K + DVV ++ + G +K+++VF +M + T+
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF----TW 437
Query: 325 NALIQVLCKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRM-E 383
A++ L Q A+ VF +M P+ TY V+ HSG +++A ++ +M
Sbjct: 438 TAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS 497
Query: 384 KHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKK 443
H I PS+ Y ++ AG +++ + KM PN + L+ A +
Sbjct: 498 DHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM-----PMNPNSIVWGALLGASRLHND 552
Query: 444 SEDLVVAGKLLIEM 457
+A K ++E+
Sbjct: 553 EPMAELAAKKILEL 566
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 149/353 (42%), Gaps = 25/353 (7%)
Query: 153 LAERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTF-RGR 211
L + Y+ G A VF + C++D+ S+N ++ + K E + L R
Sbjct: 176 LVKMYSLCGLMDMARGVF----DRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNL 231
Query: 212 FRCDSVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAW 271
SV+ ++ + +K + +V + ++E P++ N L+ Y C ++ A
Sbjct: 232 VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 272 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVL 331
F MK R DV+++T++V G+ G +K ++ FD+M V ++ +I
Sbjct: 292 RIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMP----VRDRISWTIMIDGY 343
Query: 332 CKKDCVQNALLVFEEMVGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSV 391
+ C +L +F EM G +P+ T V+ H G +E ++K+ I+ V
Sbjct: 344 LRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 392 QTYNVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAG 451
N +I + G EK +F M + T+ ++ + + ++ +
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQ------RDKFTWTAMVVGLANNGQGQEAI--- 454
Query: 452 KLLIEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEI---LRMQSRCGHALRH 501
K+ +M D P T+ VL+ +G + A++ +R R +L H
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 147/343 (42%), Gaps = 24/343 (6%)
Query: 157 YAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGR-FRCD 215
Y + G A +VF ++ E +D+ S+N++++ + + A LFK +
Sbjct: 176 YFSCGDLDSACKVFTTIKE----KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKAS 231
Query: 216 SVSYNIIANGWCLIKRTPMALQVLKEMAERGISPTMVTYNTLLKGYFRCHQLREAWEFFL 275
V+ + + I+ QV + E ++ + N +L Y +C + +A F
Sbjct: 232 HVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 291
Query: 276 EMKKRKCEIDVVTYTTMVHGFGVAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKD 335
M+++ D VT+TTM+ G+ ++ + + ++ V + M + +V +NALI +
Sbjct: 292 AMEEK----DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV----AWNALISAYEQNG 343
Query: 336 CVQNALLVFEEM-VGKGCVPNLNTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTY 394
AL+VF E+ + K N T + G +E ++KHGIR +
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 395 NVVIRYFCDAGEIEKGLSMFEKMGDGSCSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 454
+ +I + G++EK +F + ++ ++ +I + + + V +
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEK------RDVFVWSAMIGGLAMHGCGNEAV---DMF 454
Query: 455 IEMVDRGFLPRKFTFNRVLNGLALTGNQEFAKEIL-RMQSRCG 496
+M + P TF V + TG + A+ + +M+S G
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 146/385 (37%), Gaps = 56/385 (14%)
Query: 94 KALQFFKHLDRHPTYIHSPSGFEHAIDIAARMRDYTTAWTLVSRMRSLRRGPTPRAFAIL 153
KAL+ FK ++ S + A++R+ + S + R +
Sbjct: 215 KALELFKKMESEDVKA-SHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 154 AERYAAAGKPHRAVRVFISMHEHGCRQDLNSFNTILDVLCKTKRVEMAHSLFKTFRGRFR 213
+ Y G A R+F +M E +D ++ T+LD ++ E A + + +
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEE----KDNVTWTTMLDGYAISEDYEAAREVLNSMPQK-- 327
Query: 214 CDSVSYNIIANGWCLIKRTPMALQVLKEMA------------------------------ 243
D V++N + + + + AL V E+
Sbjct: 328 -DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 244 ------ERGISPTMVTYNTLLKGYFRCHQLREAWEFFLEMKKRKCEIDVVTYTTMVHGFG 297
+ GI + L+ Y +C L ++ E F ++KR DV ++ M+ G
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR----DVFVWSAMIGGLA 442
Query: 298 VAGEVKKSKRVFDEMVRAGLVPSVATYNALIQVLCKKDCVQNALLVFEEMVGK-GCVPNL 356
+ G ++ +F +M A + P+ T+ + V A +F +M G VP
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 357 NTYNVVIRGLCHSGDMERAVEYMGRMEKHGIRPSVQTYNVVIRYFCDAGEIEKGLSMFEK 416
Y ++ L SG +E+AV+++ M I PS + ++ A +I L++ E
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMP---IPPSTSVWGALL----GACKIHANLNLAEM 555
Query: 417 MGDGSCSCLPNLDTYNVLISAMFVR 441
P D +VL+S ++ +
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAK 580