Miyakogusa Predicted Gene

Lj1g3v0415480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0415480.1 Non Chatacterized Hit- tr|I1Q127|I1Q127_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,45,1e-16,ARM
repeat,Armadillo-type fold; RING/U-box,NULL; no description,Zinc
finger, RING/FYVE/PHD-type; no ,CUFF.25755.1
         (526 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26...   472   e-133
AT5G40140.1 | Symbols:  | RING/U-box superfamily protein with AR...   410   e-114
AT5G62560.1 | Symbols:  | RING/U-box superfamily protein with AR...   309   4e-84
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17...   286   2e-77
AT2G23140.2 | Symbols:  | RING/U-box superfamily protein with AR...   112   6e-25
AT2G23140.1 | Symbols:  | RING/U-box superfamily protein with AR...   112   6e-25
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12...   106   4e-23
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20...   106   4e-23
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17...   105   5e-23
AT1G71020.2 | Symbols:  | ARM repeat superfamily protein | chr1:...   105   7e-23
AT1G71020.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   105   8e-23
AT5G67340.1 | Symbols:  | ARM repeat superfamily protein | chr5:...    96   7e-20
AT1G23030.1 | Symbols:  | ARM repeat superfamily protein | chr1:...    94   2e-19
AT3G01400.1 | Symbols:  | ARM repeat superfamily protein | chr3:...    94   3e-19
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16...    92   1e-18
AT3G54790.1 | Symbols:  | ARM repeat superfamily protein | chr3:...    89   6e-18
AT3G54790.2 | Symbols:  | ARM repeat superfamily protein | chr3:...    89   1e-17
AT4G16490.1 | Symbols:  | ARM repeat superfamily protein | chr4:...    78   1e-14
AT5G58680.1 | Symbols:  | ARM repeat superfamily protein | chr5:...    77   2e-14
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548...    70   3e-12
AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556...    70   4e-12
AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556...    70   4e-12
AT2G25130.1 | Symbols:  | ARM repeat superfamily protein | chr2:...    65   1e-10
AT4G31890.2 | Symbols:  | ARM repeat superfamily protein | chr4:...    63   5e-10
AT4G31890.1 | Symbols:  | ARM repeat superfamily protein | chr4:...    63   5e-10
AT1G67530.2 | Symbols:  | ARM repeat superfamily protein | chr1:...    63   6e-10
AT1G67530.1 | Symbols:  | ARM repeat superfamily protein | chr1:...    63   6e-10
AT5G01830.1 | Symbols:  | ARM repeat superfamily protein | chr5:...    62   7e-10
AT1G24330.1 | Symbols:  | ARM repeat superfamily protein | chr1:...    62   1e-09
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143...    61   2e-09
AT5G37490.1 | Symbols:  | ARM repeat superfamily protein | chr5:...    60   3e-09
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10...    60   3e-09
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97...    60   5e-09
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18...    58   2e-08
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671...    57   4e-08
AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 ...    55   1e-07
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15...    55   2e-07
AT4G36550.1 | Symbols:  | ARM repeat superfamily protein | chr4:...    55   2e-07
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19...    55   2e-07
AT5G18340.1 | Symbols:  | ARM repeat superfamily protein | chr5:...    54   2e-07
AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 ...    53   6e-07
AT3G61390.2 | Symbols:  | RING/U-box superfamily protein | chr3:...    53   7e-07
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p...    52   1e-06
AT5G18320.1 | Symbols:  | ARM repeat superfamily protein | chr5:...    51   2e-06
AT3G03440.1 | Symbols:  | ARM repeat superfamily protein | chr3:...    49   7e-06

>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
           chr5:26048173-26049843 REVERSE LENGTH=556
          Length = 556

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 279/560 (49%), Positives = 342/560 (61%), Gaps = 38/560 (6%)

Query: 1   MGGNGKHRWK---------ISFHRSSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFER 51
           MG NG+ RW           S        + +PP EFLCPIS S+MSDPVVVSSGQTFER
Sbjct: 1   MGKNGRLRWNPFSHRSSSSTSSSSRQQQQEQQPPVEFLCPISKSVMSDPVVVSSGQTFER 60

Query: 52  LSVQVCNDLKFSPNLNG---TRPDFSTVIPNLAIKTTILNWCRKSATPPPCPPDYSAVES 108
           + VQVC DL F P LN    + PDFS +IPNL +K+TI  WC       P PPDYS VE 
Sbjct: 61  VCVQVCRDLNFIPKLNDDEESLPDFSNIIPNLNMKSTIDTWCDTVGVSRPQPPDYSTVER 120

Query: 109 LVRQAMAAEPQESVRVSEKELLKAVADNPVMIGFSHAATELGPPRVNDFNXXXXXXXXXX 168
           ++RQ M   P   +RVSE+ELL+AVA    MI   HA +EL   R  DFN          
Sbjct: 121 ILRQQMPP-PDVEIRVSEQELLRAVAHRAPMI-IHHADSELMGRR--DFNNSTTSSDESV 176

Query: 169 XXXXXXXXXXXXXXXXXCFXXXXXXXC-EIEAQ------NPSGAPPSEEEARLVKMMKSN 221
                            CF         EIE        + S +  +EE+  +   +KS+
Sbjct: 177 IVAHSPFTPLPLTTRPACFSPSPSSSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSS 236

Query: 222 EVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXXXXXXXXSLE 281
           E+F+QE+G++M+R +TR  +EARVSLC+PR+LS L+ ++ SRY              SL+
Sbjct: 237 EIFDQEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLD 296

Query: 282 KTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHA 341
           K NK+ IVR GFVP LIDVLK G  E+QEHAAG +FSL+L+DDNKM IGVLGALQPL+HA
Sbjct: 297 KKNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHA 356

Query: 342 LR-SESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXXXXXX 400
           LR +ES+RTRHDSALALYHLTL Q+NR KLV+LG VP L SMV +G  ASR         
Sbjct: 357 LRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRALLVICNLA 416

Query: 401 XXXEGRTAMLDGNAVEILVDLLRRNKFD-------SEATRENCVAALYALSHGSLRFKGL 453
              EGR+AMLD NAV ILV  LR    +       S + RENCVAAL+ALSH SLRFKGL
Sbjct: 417 CCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSHESLRFKGL 476

Query: 454 AKEAKAVEVLREIEETGTERAREKARRVLQTMRA------GEDQPGS-QFDSLFESDGLP 506
           AKEA+AVEVL+E+EE GTERAREKA+++LQ MR        ED  GS  +D + +S+G  
Sbjct: 477 AKEARAVEVLKEVEERGTERAREKAKKILQLMRERVPEDDEEDGEGSIDWDRVIDSNGSI 536

Query: 507 RTRHRAAGAWNTNHVNSTTF 526
           R+R R  G       NS+ F
Sbjct: 537 RSRFRVGGRNRVVTQNSSGF 556


>AT5G40140.1 | Symbols:  | RING/U-box superfamily protein with ARM
           repeat domain | chr5:16057347-16058999 FORWARD
           LENGTH=550
          Length = 550

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 254/538 (47%), Positives = 325/538 (60%), Gaps = 34/538 (6%)

Query: 5   GKHRWKISFHRSSSH--------SKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQV 56
           GK +W+ S  RSSS         +K E P EFLCPISGSLM+DP++VSSG ++ER  V  
Sbjct: 31  GKSKWRTSLSRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVIA 90

Query: 57  CNDLKFSPNLNGTRPDFSTVIPNLAIKTTILNWCRKSATPPPCPPDYSAVESLVRQAMAA 116
           C  L F+P      PDFSTVIPNLA+K+ I +WC +   PPP P + +A E L+   M  
Sbjct: 91  CKTLGFTPT---PPPDFSTVIPNLALKSAIHSWCERRCFPPPKPLNSAAAEKLILALMEK 147

Query: 117 EPQE-SVRVSEKELLKAVADNPVMIGFSHAATELGPPRVNDFNXXXXXXXXXXXXXXXXX 175
           +PQ   V VSEKEL++A+ D P  +  +HAATEL   R N FN                 
Sbjct: 148 KPQRRKVSVSEKELIQAIRDKP-SVRLNHAATELDR-RPNYFNSSSDESIASSSRTLQLT 205

Query: 176 XXXXXXXXXXCFXXXXXXXCEIEAQNPSGAPPSEEEARLVKMMKSNEVFEQEEGVVMLRS 235
                     CF        EIE+  P+  P  EEEA L K+ KSN + E EE ++ +R 
Sbjct: 206 TKPS------CFSSPSSG--EIESLEPNLTP--EEEALLTKL-KSNRISEIEEALISIRR 254

Query: 236 VTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXXXXXXXXSLEKTNKVRIVRSGFVP 295
           +TR  E +R+SLCT R++SAL+ L+ SRY              SLEK+NKV+IVRSG VP
Sbjct: 255 ITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVKIVRSGIVP 314

Query: 296 FLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRHDSAL 355
            LIDVLK G  E+QEH+AG +FSLAL+D+NK AIGVLG L+PL+H +R  +E TRHDSAL
Sbjct: 315 PLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTELTRHDSAL 374

Query: 356 ALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXXXXXXXXXEGRTAMLDGNAV 415
           ALYHL+LVQSNR KLVKLG V  LL MV+ G +  R              R A+LD   V
Sbjct: 375 ALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMIGRVLLILCNMASCPVSRPALLDSGGV 434

Query: 416 EILVDLLRRNKFDSEATRENCVAALYALSH-GSLRFKGLAKEAKAVEVLREIEETGTERA 474
           E +V +LRR++  +E+TRE+CVA LY LSH G LRFKGLA  A AVE L ++E +G ERA
Sbjct: 435 ECMVGVLRRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERA 494

Query: 475 REKARRVLQTMRAG-EDQPGSQ-----FDSLFESDGLPRTRHRAAGAWNTNHVNSTTF 526
           ++KARRVL+ +RA  ED    +     ++ L  S  + R+R R  G    + VNS  F
Sbjct: 495 KQKARRVLEVLRAKIEDDDLVENEEIDWEELLNSGDVSRSRCRLGG--EKSCVNSAEF 550


>AT5G62560.1 | Symbols:  | RING/U-box superfamily protein with ARM
           repeat domain | chr5:25110073-25111752 FORWARD
           LENGTH=559
          Length = 559

 Score =  309 bits (791), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 172/331 (51%), Positives = 219/331 (66%), Gaps = 12/331 (3%)

Query: 206 PPSEEEARLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYX 265
           P S EE  +   ++  ++F+ E+G+++LR +TR+ E+ RVSLCT R+LS LR L+ SRY 
Sbjct: 231 PMSPEEEEIFNKLRGTDIFDHEQGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYN 290

Query: 266 XXXXXXXXXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDN 325
                        SLEK NKV+IVRSGFVP LIDVLK G +E+QEH AGALFSLAL+D+N
Sbjct: 291 LVQTNAAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDEN 350

Query: 326 KMAIGVLGALQPLMHALR-SESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVA 384
           KM IGVLGA++PL+HALR SESER R D+ALALYHL+L+ SNR +LV+ G VPTLLSMV 
Sbjct: 351 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVR 410

Query: 385 NGNLASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRR-NKFDSEATRENCVAALYAL 443
           +G+  SR            +G+ AMLDGNAV ILV  LR     DSEA RENCVA L  L
Sbjct: 411 SGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTL 470

Query: 444 SHGSLRFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMR--------AGEDQPGSQ 495
             G+LRF+GLA EA A EVL E+EE G ER +EKA ++L  MR         GE+    +
Sbjct: 471 CQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKILLAMRGGGGGESEFGENAEARE 530

Query: 496 FDSLFESDGLPRTRHRAAGAWNTNHVNSTTF 526
           ++ + E+ GL RT+ +  G  N     S+ F
Sbjct: 531 WNRMLEATGLSRTQFQ--GGQNGGFAYSSQF 559



 Score =  146 bits (368), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/131 (58%), Positives = 89/131 (67%), Gaps = 12/131 (9%)

Query: 1   MGGNGKHRWKISFHRSSS---------HSKLEPPKEFLCPISGSLMSDPVVVSSGQTFER 51
           MGGN K RW  SFH+ SS         H   E P EFLCPI+G LMSDPVVVSSGQTFER
Sbjct: 1   MGGN-KQRW-FSFHQRSSSATTTTLPQHKHDETPPEFLCPITGFLMSDPVVVSSGQTFER 58

Query: 52  LSVQVCNDLKFSPN-LNGTRPDFSTVIPNLAIKTTILNWCRKSATPPPCPPDYSAVESLV 110
           LSVQVC +L + P+ L+GTRPD STVIPNLA+K+TI +WC +     P PPD + VE +V
Sbjct: 59  LSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMKSTIFSWCDRQKVDHPRPPDAAYVEGVV 118

Query: 111 RQAMAAEPQES 121
           R  M  +P  S
Sbjct: 119 RARMDKDPNPS 129


>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
           chr3:17644434-17645963 FORWARD LENGTH=509
          Length = 509

 Score =  286 bits (733), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/313 (50%), Positives = 206/313 (65%), Gaps = 10/313 (3%)

Query: 206 PPSEEEARLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYX 265
           P S EE  +   + S +  + E+G++ LR  TR+ E  R+SLCT R+LS LR L+ SRY 
Sbjct: 180 PMSPEEEEIYNKLTSVDTIDHEQGLIQLRKTTRSNETTRISLCTDRILSLLRSLIVSRYN 239

Query: 266 XXXXXXXXXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDN 325
                        SLEK NK++IVRSGFVP LIDVLK G +E+QEH  GALFSLA++++N
Sbjct: 240 IVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEEN 299

Query: 326 KMAIGVLGALQPLMHALR-SESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVA 384
           KM IGVLGA++PL+HALR SESER R D+ALALYHL+L+ +NR +LVK G VP +LSM+ 
Sbjct: 300 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIR 359

Query: 385 NGNLASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKF--DSEATRENCVAALYA 442
           +G  ASR            EG+ AMLDGNAV ILV  LR +       A RENCV AL  
Sbjct: 360 SGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLT 419

Query: 443 LSHGSLRFKGLAKEAKAVEVLREI--EETGTERAREKARRVLQTMRAGEDQPGS-----Q 495
           LS G++RF+GLA EA A E+L EI   E+G+ R +EKA ++LQT+R G  + G      +
Sbjct: 420 LSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLRGGGSEFGEGAEARE 479

Query: 496 FDSLFESDGLPRT 508
           ++ + E+ GL R+
Sbjct: 480 WNRMLEASGLSRS 492



 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/116 (59%), Positives = 89/116 (76%), Gaps = 2/116 (1%)

Query: 23  EPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNL-NGTRPDFSTVIPNLA 81
           E P EFLCPI+G LMSDPVVV+SGQTFER+SVQVC +L F+P L +GT+PD STVIPNLA
Sbjct: 9   ETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTVIPNLA 68

Query: 82  IKTTILNWCRKSATPPPCPPDYSAVESLVRQAMAAEPQESV-RVSEKELLKAVADN 136
           +K+TIL+WC ++    P PPDY+ VE +VR  M + P  S  R+++ E+L  VA+N
Sbjct: 69  MKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMDSLPPGSGHRIAKSEILPPVAEN 124


>AT2G23140.2 | Symbols:  | RING/U-box superfamily protein with ARM
           repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
          Length = 826

 Score =  112 bits (280), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 10/278 (3%)

Query: 213 RLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXX 272
           +LV+ +KS+ +  Q +    LR + ++  + R+ +       A+ LLVE  Y        
Sbjct: 545 KLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS---GAIVLLVELLYSTDSATQE 601

Query: 273 XXXXXX---SLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAI 329
                    S+   NK  I  +G +  LI VL+ G SE++E++A  LFSL++ ++NK+ I
Sbjct: 602 NAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKI 661

Query: 330 GVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMV-ANGNL 388
           G  GA+ PL+  L + + R + D+A AL++L++ Q N+  +V+ G V  L+ ++     +
Sbjct: 662 GQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGM 721

Query: 389 ASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSL 448
             +            EGR A+     + +LV+++   +  S   +EN  AAL  LS  S 
Sbjct: 722 VDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV---ELGSARGKENAAAALLQLSTNSG 778

Query: 449 RFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMR 486
           RF  +  +  AV  L  + ++GT RAREKA+ +L   R
Sbjct: 779 RFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFR 816



 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 27  EFLCPISGSLMSDPVVVSSGQTFERLSVQVCND--LKFSPNLNGTRPDFSTVIPNLAIKT 84
           +F CP+S  +M+DPV+VSSGQT+E+  ++   D  LK  P    T    +T+IPN  +K 
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLT-HTTLIPNYTVKA 291

Query: 85  TILNWCRKSATPPPCPPDYSAVESL 109
            I NWC  +    P P   +++  L
Sbjct: 292 LIANWCETNDVKLPDPNKSTSLNEL 316


>AT2G23140.1 | Symbols:  | RING/U-box superfamily protein with ARM
           repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
          Length = 829

 Score =  112 bits (280), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 10/278 (3%)

Query: 213 RLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXX 272
           +LV+ +KS+ +  Q +    LR + ++  + R+ +       A+ LLVE  Y        
Sbjct: 548 KLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS---GAIVLLVELLYSTDSATQE 604

Query: 273 XXXXXX---SLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAI 329
                    S+   NK  I  +G +  LI VL+ G SE++E++A  LFSL++ ++NK+ I
Sbjct: 605 NAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKI 664

Query: 330 GVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMV-ANGNL 388
           G  GA+ PL+  L + + R + D+A AL++L++ Q N+  +V+ G V  L+ ++     +
Sbjct: 665 GQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGM 724

Query: 389 ASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSL 448
             +            EGR A+     + +LV+++   +  S   +EN  AAL  LS  S 
Sbjct: 725 VDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV---ELGSARGKENAAAALLQLSTNSG 781

Query: 449 RFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMR 486
           RF  +  +  AV  L  + ++GT RAREKA+ +L   R
Sbjct: 782 RFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFR 819



 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 27  EFLCPISGSLMSDPVVVSSGQTFERLSVQVCND--LKFSPNLNGTRPDFSTVIPNLAIKT 84
           +F CP+S  +M+DPV+VSSGQT+E+  ++   D  LK  P    T    +T+IPN  +K 
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLT-HTTLIPNYTVKA 294

Query: 85  TILNWCRKSATPPPCPPDYSAVESL 109
            I NWC  +    P P   +++  L
Sbjct: 295 LIANWCETNDVKLPDPNKSTSLNEL 319


>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
           chr2:12367001-12370608 REVERSE LENGTH=962
          Length = 962

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 279 SLEKTNKVRIVRS-GFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQP 337
           S+ + NK +IV S G VP ++ VL+ G  E++E+AA  LFSL++ D+NK+ IG  GA+ P
Sbjct: 426 SICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPP 485

Query: 338 LMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVA--NGNLASRXXXX 395
           L+  L   S+R + D+A AL++L + Q N+ K V+ G+VP L+ ++      +       
Sbjct: 486 LVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSI 545

Query: 396 XXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAK 455
                   +G++ +   +AV +LVD +R     S   +EN  A L  L   + +    A+
Sbjct: 546 LAILSSHPDGKSEVGAADAVPVLVDFIRSG---SPRNKENSAAVLVHLCSWNQQHLIEAQ 602

Query: 456 EAKAVEVLREIEETGTERAREKARRVLQTMRAGEDQ 491
           +   +++L E+ E GT+R + KA ++L       DQ
Sbjct: 603 KLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFNDQ 638



 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 6/126 (4%)

Query: 15  RSSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVC---NDLKFSPNLNGTRP 71
           R      L PP+EF CPIS  LM+DPV+VSSGQT+ER  ++       L           
Sbjct: 247 RDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTS 306

Query: 72  DFSTVIPNLAIKTTILNWCRKSATPPPCPPDYSAVESLVRQAMAAEPQESVRVSEKELLK 131
           D  T  PN  +++ I  WC  +   PP  P+ S   S    + +A   E  ++ E+ LLK
Sbjct: 307 DIMT--PNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKI-EELLLK 363

Query: 132 AVADNP 137
             +  P
Sbjct: 364 LTSQQP 369


>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
           chr3:20321524-20323848 FORWARD LENGTH=632
          Length = 632

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 123/213 (57%), Gaps = 5/213 (2%)

Query: 279 SLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPL 338
           S+ + NK  IV +G +  +++VLK G  E++E+AA  LFSL++ D+NK+AIG  GA+Q L
Sbjct: 415 SINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQAL 474

Query: 339 MHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMV--ANGNLASRXXXXX 396
           +  L   + R + D+A A+++L + Q N+ + VK G+V  L  ++  A G +        
Sbjct: 475 ISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAIL 534

Query: 397 XXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAKE 456
                  EG+TA+ +  ++ +LV+++R     S   REN  A L+ L  G++    +A+E
Sbjct: 535 AILSTNQEGKTAIAEAESIPVLVEIIRTG---SPRNRENAAAILWYLCIGNIERLNVARE 591

Query: 457 AKAVEVLREIEETGTERAREKARRVLQTMRAGE 489
             A   L+E+ E GT+RA+ KA  +L+ ++  E
Sbjct: 592 VGADVALKELTENGTDRAKRKAASLLELIQQTE 624



 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDL--KFSPNLNGTRPDFSTVIPNLAI 82
           P+ F CPIS  LM DPV+VS+GQT+ER S+Q   D   K  P    T    + + PN  +
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL-HAGLTPNYVL 307

Query: 83  KTTILNWCRKSATPPP 98
           K+ I  WC  +    P
Sbjct: 308 KSLIALWCESNGIELP 323


>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
           chr3:17124106-17126539 REVERSE LENGTH=660
          Length = 660

 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 6/216 (2%)

Query: 279 SLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPL 338
           S+ + NK  IV +G +P ++ VLK G  E++E+AA  LFSL++ D+NK+ IG LGA+ PL
Sbjct: 422 SICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPL 481

Query: 339 MHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVA--NGNLASRXXXXX 396
           +  L   ++R + D+A AL++L + Q N+ K ++ GV+PTL  ++      +        
Sbjct: 482 VVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAIL 541

Query: 397 XXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAKE 456
                  EG+  +   +AV  LV+ +R     S   REN  A L  L  G  +    A++
Sbjct: 542 AILSSHPEGKAIIGSSDAVPSLVEFIRTG---SPRNRENAAAVLVHLCSGDPQHLVEAQK 598

Query: 457 AKAVEVLREIEETGTERAREKARRVLQTM-RAGEDQ 491
              +  L ++   GT+R + KA ++L+ + R  E Q
Sbjct: 599 LGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQ 634



 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 11/83 (13%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLNGTRPDF------STVIP 78
           P +F CPIS  +M DPV+VSSGQT+ER  ++     K+    + T P        +T+ P
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIE-----KWIEGGHSTCPKTQQALTSTTLTP 311

Query: 79  NLAIKTTILNWCRKSATPPPCPP 101
           N  +++ I  WC  +   PP PP
Sbjct: 312 NYVLRSLIAQWCEANDIEPPKPP 334


>AT1G71020.2 | Symbols:  | ARM repeat superfamily protein |
           chr1:26790825-26792357 REVERSE LENGTH=480
          Length = 480

 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 7/285 (2%)

Query: 214 LVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSAL-RLLVESRYXXXXXXXX 272
           LV  + S  + ++   V  +RS+++   + R+ +     +  L +LL             
Sbjct: 198 LVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAV 257

Query: 273 XXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVL 332
                 S+ + NK  I+ +G V  ++ VL+ G  E++E+AA  LFSL+L D+NK+ IG  
Sbjct: 258 TCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGAS 317

Query: 333 GALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGN---LA 389
           GA+  L+  L+  S R + D+A AL++L + Q N+ + V+ G+V  L+ M+ + +   +A
Sbjct: 318 GAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMA 377

Query: 390 SRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLR 449
                           +TA+L  NA+  L+D L++   D    REN  A L  L      
Sbjct: 378 DEALTILSVLASNQVAKTAILRANAIPPLIDCLQK---DQPRNRENAAAILLCLCKRDTE 434

Query: 450 FKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMRAGEDQPGS 494
                    AV  L E+   GTERA+ KA  +L+ +R    + GS
Sbjct: 435 KLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSSRKLGS 479



 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 26/153 (16%)

Query: 16  SSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQ---VCNDLKFSPNLNGTRPD 72
           S     L  P++FLCPIS  LM DP +VS+GQT+ER  +Q    C +L   P       +
Sbjct: 87  SQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLS-CPKTQQKLEN 145

Query: 73  FSTVIPNLAIKTTILNWCRKSATPPP-----------------CPPDYSAVESLVRQAMA 115
           F T+ PN  +++ I  WC K     P                    D SA+ +LV + ++
Sbjct: 146 F-TLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCK-LS 203

Query: 116 AEPQESVR--VSE-KELLKAVADNPVMIGFSHA 145
           ++  E  R  VSE + L K   DN ++I  + A
Sbjct: 204 SQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGA 236


>AT1G71020.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:26790825-26793105 REVERSE LENGTH=628
          Length = 628

 Score =  105 bits (262), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 7/285 (2%)

Query: 214 LVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSAL-RLLVESRYXXXXXXXX 272
           LV  + S  + ++   V  +RS+++   + R+ +     +  L +LL             
Sbjct: 346 LVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAV 405

Query: 273 XXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVL 332
                 S+ + NK  I+ +G V  ++ VL+ G  E++E+AA  LFSL+L D+NK+ IG  
Sbjct: 406 TCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGAS 465

Query: 333 GALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGN---LA 389
           GA+  L+  L+  S R + D+A AL++L + Q N+ + V+ G+V  L+ M+ + +   +A
Sbjct: 466 GAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMA 525

Query: 390 SRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLR 449
                           +TA+L  NA+  L+D L++   D    REN  A L  L      
Sbjct: 526 DEALTILSVLASNQVAKTAILRANAIPPLIDCLQK---DQPRNRENAAAILLCLCKRDTE 582

Query: 450 FKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMRAGEDQPGS 494
                    AV  L E+   GTERA+ KA  +L+ +R    + GS
Sbjct: 583 KLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSSRKLGS 627



 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 26/153 (16%)

Query: 16  SSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQ---VCNDLKFSPNLNGTRPD 72
           S     L  P++FLCPIS  LM DP +VS+GQT+ER  +Q    C +L   P       +
Sbjct: 235 SQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLS-CPKTQQKLEN 293

Query: 73  FSTVIPNLAIKTTILNWCRKSATPPP-----------------CPPDYSAVESLVRQAMA 115
           F T+ PN  +++ I  WC K     P                    D SA+ +LV + ++
Sbjct: 294 F-TLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCK-LS 351

Query: 116 AEPQESVR--VSE-KELLKAVADNPVMIGFSHA 145
           ++  E  R  VSE + L K   DN ++I  + A
Sbjct: 352 SQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGA 384


>AT5G67340.1 | Symbols:  | ARM repeat superfamily protein |
           chr5:26864996-26867450 FORWARD LENGTH=707
          Length = 707

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 5/280 (1%)

Query: 210 EEARLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXX 269
           E  +L+  +KS+ +  Q E    +R + RN  + R+ +     + +L  L+ S       
Sbjct: 422 EVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQA 481

Query: 270 XXXXXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGF-SESQEHAAGALFSLALDDDNKMA 328
                    S+   NK  I  SG +  LI VLK G+  E++ ++A  LFSL++ ++ K  
Sbjct: 482 DAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTE 541

Query: 329 IGVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANG-N 387
           IG  GA++PL+  L S S   + D+A AL++L++   N+ K+++ G V  L+ ++     
Sbjct: 542 IGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFG 601

Query: 388 LASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGS 447
           +  +            EG+ A+ +   + +LV+++   +  S   +EN  AAL  L   S
Sbjct: 602 MVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVV---ELGSARGKENATAALLQLCTHS 658

Query: 448 LRFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMRA 487
            +F         +  L  + ++GT R +EKA+ +L+  +A
Sbjct: 659 PKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKA 698



 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCND--LKFSPNLNGTRPDFS--TVIPNL 80
           P +F C +S  LM+DPV+V+SGQTFER+ +Q   D  L   P    TR   S  T+ PN 
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPK---TRQALSHTTLTPNF 297

Query: 81  AIKTTILNWCRKSATPPPCP 100
            ++  + +WC  +   PP P
Sbjct: 298 IVRAFLASWCETNNVYPPDP 317


>AT1G23030.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:8156745-8158842 FORWARD LENGTH=612
          Length = 612

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 6/276 (2%)

Query: 214 LVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXXX 273
           LV+ + S    ++   V  +RS+++   + R+ +     +  L  L+ S           
Sbjct: 336 LVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAIT 395

Query: 274 XXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLG 333
                S+ + NK  I+ +G V  ++ VL+ G  E++E+AA  LFSL+L D+NK+ IG  G
Sbjct: 396 CVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSG 455

Query: 334 ALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGN---LAS 390
           A+  L+  L + + R + D+A AL++L +   N+ + V+ G+V  L+ M+++     +  
Sbjct: 456 AIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVD 515

Query: 391 RXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRF 450
                        + ++A++  N +  L+ +L   + D    REN  A L +L       
Sbjct: 516 EALTILSVLANNQDAKSAIVKANTLPALIGIL---QTDQTRNRENAAAILLSLCKRDTEK 572

Query: 451 KGLAKEAKAVEVLREIEETGTERAREKARRVLQTMR 486
                   AV  L ++ + GTER + KA  +L+ +R
Sbjct: 573 LITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608



 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 162/394 (41%), Gaps = 57/394 (14%)

Query: 16  SSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQ---VCNDLKFSPNLNGTRPD 72
           S    KL  P +FLCP+S  LM DPV+V++GQT+ER  +Q    C +L   P       +
Sbjct: 233 SKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLT-CPKTQQKLEN 291

Query: 73  FSTVIPNLAIKTTILNWCRKSATPPPC---------PPDYSAVESLVRQAMAAEPQESVR 123
           F T+ PN  +++ I  WC +     P            D S + +LV Q +++   E  R
Sbjct: 292 F-TLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALV-QRLSSRSTEDRR 349

Query: 124 --VSE-KELLKAVADNPVMIGFSHAATELGPPRVNDFNXXXXXXXXXXXXXXXXXXXXXX 180
             VSE + L K   DN ++I  + A     P  VN                         
Sbjct: 350 NAVSEIRSLSKRSTDNRILIAEAGAI----PVLVN---------------LLTSEDVATQ 390

Query: 181 XXXXXCFXXXXXXXCEIEAQNPSGAPPSEEEARLVKMMKSNEVFEQEEGVVMLRSVTRNR 240
                C           E    +GA  S     +V+++++  +  +E     L S++   
Sbjct: 391 ENAITCVLNLSIYENNKELIMFAGAVTS-----IVQVLRAGTMEARENAAATLFSLSL-A 444

Query: 241 EEARVSLCTPRLLSALRLLVESRYXXXXXXXXXXXXXXSLEKTNKVRIVRSGFVPFLIDV 300
           +E ++ +     + AL  L+E+                 +   NK R VR+G V  L+ +
Sbjct: 445 DENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKM 504

Query: 301 LKGGFSESQEH-----AAGALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRHDSAL 355
           L    S+S  H     A   L  LA + D K AI     L  L+  L+++  R R ++A 
Sbjct: 505 L----SDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAA 560

Query: 356 ALYHLTLVQSNRVKLV---KLGVVPTLLSMVANG 386
            L  L+L + +  KL+   +LG V  L+ +  NG
Sbjct: 561 IL--LSLCKRDTEKLITIGRLGAVVPLMDLSKNG 592


>AT3G01400.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:151920-152987 FORWARD LENGTH=355
          Length = 355

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 135/269 (50%), Gaps = 5/269 (1%)

Query: 220 SNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXXXXXXXXS 279
           S  + EQ++  + +R +++N+ E R+ +     +  L  L+ S                S
Sbjct: 74  SYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLS 133

Query: 280 LEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLM 339
           L   NK  I  SG +  L+  LK G   ++E+AA AL  L+  ++NK+AIG  GA+  L+
Sbjct: 134 LCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLV 193

Query: 340 HALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVAN--GNLASRXXXXXX 397
           + L +   R + D++ ALY L   + N+++ V+ G++  L+ ++A+   N+  +      
Sbjct: 194 NLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMS 253

Query: 398 XXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAKEA 457
                 E + A+++   V +LV+++   +  ++  +E  V+ L  L   S+ ++ +    
Sbjct: 254 LLMSVPESKPAIVEEGGVPVLVEIV---EVGTQRQKEMAVSILLQLCEESVVYRTMVARE 310

Query: 458 KAVEVLREIEETGTERAREKARRVLQTMR 486
            A+  L  + + GT RA++KA  +++ +R
Sbjct: 311 GAIPPLVALSQAGTSRAKQKAEALIELLR 339


>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
           chr5:16928086-16930367 REVERSE LENGTH=660
          Length = 660

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 10/292 (3%)

Query: 205 APPSEEEAR-----LVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLL 259
           +P S+ E +     LV+ + S+++ EQ   V  +R + R   E RV +     +  L  L
Sbjct: 370 SPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQL 429

Query: 260 VESRYXXXXXXXXXXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSL 319
           +                  S+++ NK  I   G +P +I++L+ G  E++E++A ALFSL
Sbjct: 430 LSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSL 489

Query: 320 ALDDDNKMAIGVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVP-- 377
           ++ D+NK+ IG+   + PL+  L+  + R + D+  AL++L+L  +N+ + +  G+V   
Sbjct: 490 SMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPL 549

Query: 378 TLLSMVANGNLASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCV 437
             L    N  +               EGR A+   + +E LV+ +R+    +   +E   
Sbjct: 550 LNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQG---TPKNKECAT 606

Query: 438 AALYALSHGSLRFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMRAGE 489
           + L  L   +  F   A +    E L EI  +GT RA+ KA  ++Q +   E
Sbjct: 607 SVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSE 658



 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 14/124 (11%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDL--KFSPNLNGTRP--DFSTVIPNL 80
           P EFLCPI+  +M DPV++++GQT+E+ S+Q   D   K  P    TR   D  ++ PN 
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPK---TRQELDHLSLAPNF 347

Query: 81  AIKTTILNWCRKSATPPP---CPPDYSAVE----SLVRQAMAAEPQESVRVSEKELLKAV 133
           A+K  I+ WC K+    P     PD    +    SL+ +A+++   E  R S K++    
Sbjct: 348 ALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLA 407

Query: 134 ADNP 137
            +NP
Sbjct: 408 RENP 411


>AT3G54790.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:20281830-20284363 REVERSE LENGTH=760
          Length = 760

 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 5/298 (1%)

Query: 195 CEIEAQNPSGAPPSEEEARLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLS 254
           C +   + SG   +    +LV+ +KS     +      +R +T N  E RV +     ++
Sbjct: 458 CSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAIT 517

Query: 255 ALRLLVESRYXXXXXXXXXXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAG 314
            L  L+ S                S+ + NK  IV  G +  L+ VL  G   ++E++A 
Sbjct: 518 PLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAA 577

Query: 315 ALFSLALDDDNKMAIGVL-GALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKL 373
           +LFSL++   N+  IG    A+Q L++ L   + R + D+A AL++L++   N+ ++V+ 
Sbjct: 578 SLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQA 637

Query: 374 GVVPTLLSMVA-NGNLASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEAT 432
             V  L+ ++  +  +  +            EGR A++    + +LV+ +      S+  
Sbjct: 638 KAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV---DLGSQRG 694

Query: 433 RENCVAALYALSHGSLRFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMRAGED 490
           +EN  + L  L   S +F  L  +  A+  L  + ++GT+RA+EKA+++L   R   D
Sbjct: 695 KENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRD 752



 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 7/69 (10%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQ--VCNDLKFSPNLNGTRPDFS--TVIPNL 80
           P  F CP+S  LM DPV+V+SGQTF+R S++  + N L   P    TR   +   +IPN 
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPR---TRQVLTHQELIPNY 295

Query: 81  AIKTTILNW 89
            +K  I +W
Sbjct: 296 TVKAMIASW 304


>AT3G54790.2 | Symbols:  | ARM repeat superfamily protein |
           chr3:20281830-20284255 REVERSE LENGTH=724
          Length = 724

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 5/298 (1%)

Query: 195 CEIEAQNPSGAPPSEEEARLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLS 254
           C +   + SG   +    +LV+ +KS     +      +R +T N  E RV +     ++
Sbjct: 422 CSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAIT 481

Query: 255 ALRLLVESRYXXXXXXXXXXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAG 314
            L  L+ S                S+ + NK  IV  G +  L+ VL  G   ++E++A 
Sbjct: 482 PLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAA 541

Query: 315 ALFSLALDDDNKMAIGVL-GALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKL 373
           +LFSL++   N+  IG    A+Q L++ L   + R + D+A AL++L++   N+ ++V+ 
Sbjct: 542 SLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQA 601

Query: 374 GVVPTLLSMVA-NGNLASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEAT 432
             V  L+ ++  +  +  +            EGR A++    + +LV+ +      S+  
Sbjct: 602 KAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV---DLGSQRG 658

Query: 433 RENCVAALYALSHGSLRFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMRAGED 490
           +EN  + L  L   S +F  L  +  A+  L  + ++GT+RA+EKA+++L   R   D
Sbjct: 659 KENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRD 716



 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 7/69 (10%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQ--VCNDLKFSPNLNGTRPDFS--TVIPNL 80
           P  F CP+S  LM DPV+V+SGQTF+R S++  + N L   P    TR   +   +IPN 
Sbjct: 203 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPR---TRQVLTHQELIPNY 259

Query: 81  AIKTTILNW 89
            +K  I +W
Sbjct: 260 TVKAMIASW 268


>AT4G16490.1 | Symbols:  | ARM repeat superfamily protein |
           chr4:9293891-9295530 REVERSE LENGTH=472
          Length = 472

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 7/276 (2%)

Query: 215 VKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXXXX 274
           +  ++S+ V  +      LR + +NR + RV +     + AL  L+              
Sbjct: 189 IDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTA 248

Query: 275 XXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGA 334
               SL   NK  I   G +  L+ VLK G   S+++AA AL SLAL ++NK +IG  GA
Sbjct: 249 LLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGA 308

Query: 335 LQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVA--NGNLASRX 392
           + PL+  L + S R + D+   LY L  +Q N+ + V  G V  L+ +VA     +A + 
Sbjct: 309 IPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKA 368

Query: 393 XXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKG 452
                      +G+ A+++   +  LV+ +      S   +E  +  L  L   S+R +G
Sbjct: 369 MVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDG---SVKGKEFAILTLLQLCSDSVRNRG 425

Query: 453 LAKEAKAVEVLREIEETG--TERAREKARRVLQTMR 486
           L     A+  L  + ++G  + RA+ KA R+L  +R
Sbjct: 426 LLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLR 461


>AT5G58680.1 | Symbols:  | ARM repeat superfamily protein |
           chr5:23708247-23709320 REVERSE LENGTH=357
          Length = 357

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 22/268 (8%)

Query: 220 SNEVFEQEEGVVMLRSVTRNREEARVSLCTPRLLSALRLLVESRYXXXXXXXXXXXXXXS 279
           S+ + EQ++  + +R +++N+ E R+ L     +  L  L+ S                S
Sbjct: 72  SSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLS 131

Query: 280 LEKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLM 339
           L   NK  IV SG V  L++ L+ G   ++E+AA AL  L+  ++NK+ IG  GA+  L+
Sbjct: 132 LCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLV 191

Query: 340 HALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVAN--GNLASRXXXXXX 397
           + L +   R + D++ ALY L     N+ + V+ G++  L+ ++ +   ++  +      
Sbjct: 192 NLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMN 251

Query: 398 XXXXXXEGRTAMLDGNAVEILVDLL----RRNK----------------FDSEATRENCV 437
                 E + A+++   V +LV+++    +R K                + +   RE  V
Sbjct: 252 LLMSAPESKPAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQLCEESVVYRTMVAREGAV 311

Query: 438 AALYALSHGSLRFKGLAKEAKAVEVLRE 465
             L ALS GS       K    +E+LR+
Sbjct: 312 PPLVALSQGSASRGAKVKAEALIELLRQ 339



 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 105/201 (52%), Gaps = 6/201 (2%)

Query: 284 NKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHALR 343
           N++++ ++G +  L+ ++     + QE+   A+ +L+L D+NK  I   GA++PL++ALR
Sbjct: 95  NRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALR 154

Query: 344 SESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXXXXXX--X 401
             +  T+ ++A AL  L+ V+ N++ + + G +P L++++ NG   ++            
Sbjct: 155 LGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCS 214

Query: 402 XXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAKEAKAVE 461
             E +T  ++   ++ LV+L+     D E+   +  A +  L   +   K    E   V 
Sbjct: 215 TNENKTRAVESGIMKPLVELM----IDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVP 270

Query: 462 VLREIEETGTERAREKARRVL 482
           VL EI E GT+R +E +  +L
Sbjct: 271 VLVEIVEAGTQRQKEISVSIL 291


>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
           chr3:2354884-2356613 FORWARD LENGTH=460
          Length = 460

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 3/196 (1%)

Query: 292 GFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRH 351
             +P LID L+ G   ++ +AA A+F+L+  D NK+ IG  G L+PL+  L   +     
Sbjct: 258 NVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIK 317

Query: 352 DSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXXXXXXXXXEGRTAMLD 411
           D A A++ L +   NR + V+ G V  L   ++NG                 +    + +
Sbjct: 318 DVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVEELGE 377

Query: 412 GNAVEILVDLLRRNKFDSEATRENCVAALYALSHGS-LRFKGLAKEAKAVEVLREIEETG 470
              V  L+ + R +  + +  +EN +  L+ +      ++K + +E  A   + ++   G
Sbjct: 378 LGGVSWLLKITRES--ECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREG 435

Query: 471 TERAREKARRVLQTMR 486
           T RA+ KA  +L  +R
Sbjct: 436 TSRAQRKANGILDRLR 451



 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 14/89 (15%)

Query: 15  RSSSHSKLEP---PKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLNGTRP 71
           +SSS   LE    P+EF CP+S  LM DPVV++SGQT+++L +Q     K+  + N T P
Sbjct: 62  KSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQ-----KWLSSGNRTCP 116

Query: 72  DFSTVI------PNLAIKTTILNWCRKSA 94
               V+      PNL I+  I  WC+K+ 
Sbjct: 117 KTQQVLPHTALTPNLLIREMISKWCKKNG 145


>AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
           chr3:2355636-2356613 FORWARD LENGTH=325
          Length = 325

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 3/195 (1%)

Query: 293 FVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRHD 352
            +P LID L+ G   ++ +AA A+F+L+  D NK+ IG  G L+PL+  L   +     D
Sbjct: 124 VIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKD 183

Query: 353 SALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXXXXXXXXXEGRTAMLDG 412
            A A++ L +   NR + V+ G V  L   ++NG                 +    + + 
Sbjct: 184 VAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVEELGEL 243

Query: 413 NAVEILVDLLRRNKFDSEATRENCVAALYALSHGS-LRFKGLAKEAKAVEVLREIEETGT 471
             V  L+ + R +  + +  +EN +  L+ +      ++K + +E  A   + ++   GT
Sbjct: 244 GGVSWLLKITRES--ECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGT 301

Query: 472 ERAREKARRVLQTMR 486
            RA+ KA  +L  +R
Sbjct: 302 SRAQRKANGILDRLR 316


>AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
           chr3:2355636-2356613 FORWARD LENGTH=325
          Length = 325

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 3/195 (1%)

Query: 293 FVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRHD 352
            +P LID L+ G   ++ +AA A+F+L+  D NK+ IG  G L+PL+  L   +     D
Sbjct: 124 VIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKD 183

Query: 353 SALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXXXXXXXXXEGRTAMLDG 412
            A A++ L +   NR + V+ G V  L   ++NG                 +    + + 
Sbjct: 184 VAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVEELGEL 243

Query: 413 NAVEILVDLLRRNKFDSEATRENCVAALYALSHGS-LRFKGLAKEAKAVEVLREIEETGT 471
             V  L+ + R +  + +  +EN +  L+ +      ++K + +E  A   + ++   GT
Sbjct: 244 GGVSWLLKITRES--ECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGT 301

Query: 472 ERAREKARRVLQTMR 486
            RA+ KA  +L  +R
Sbjct: 302 SRAQRKANGILDRLR 316


>AT2G25130.1 | Symbols:  | ARM repeat superfamily protein |
           chr2:10695243-10696959 REVERSE LENGTH=468
          Length = 468

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 17/238 (7%)

Query: 283 TNKVRIVRSGFVPFLIDVLKGGFSESQ---EHAAGALFSLALDDDNKMAIGVLGALQPLM 339
            NK  IV++G V  ++ +++     +Q   E        L+  D NK  IG  GA+  L+
Sbjct: 186 VNKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLV 245

Query: 340 HALR----SESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXX 395
             L+    + S + R D+  ALY+L++   N   +++  ++P LL+ + +  ++ R    
Sbjct: 246 KTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAI 305

Query: 396 XXXXXXXXEGRTAMLDGNAVE---ILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKG 452
                   EGR A+  G  VE   ILVD+L  N  DS   +E  V  L  ++H     + 
Sbjct: 306 LTNVVSVPEGRKAI--GEVVEAFPILVDVLNWN--DSIKCQEKAVYILMLMAHKGYGDRN 361

Query: 453 LAKEAKAVEVLREIEETGTERAREKARRVLQTMRAGEDQPGSQFDS-LFESDGLPRTR 509
              EA     L E+   G+  A+++A RVL+ +R  +   G Q  + ++ +  L R R
Sbjct: 362 AMIEAGIESSLLELTLVGSPLAQKRASRVLECLRVVD--KGKQVSAPIYGTSSLGRER 417


>AT4G31890.2 | Symbols:  | ARM repeat superfamily protein |
           chr4:15427290-15429049 REVERSE LENGTH=518
          Length = 518

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 10/211 (4%)

Query: 284 NKVRIVRSGFVPFLIDVLKGGFSESQEHAAGAL---FSLALDDDNKMAIGVLGALQPLMH 340
           NK  IV++G V  ++ +++   +  QE A   +     L+  D NK  IG  GA+  L+ 
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279

Query: 341 ALR----SESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXX 396
            L+    + S + R D+  ALY+L++ Q N   +++  ++  LL+ + +  ++ R     
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAIL 339

Query: 397 XXXXXXXEGRTAM-LDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAK 455
                  EGR A+ L  +A  +LVD+L  N  DS   +E     L  ++H     + +  
Sbjct: 340 SNLVAVPEGRKAIGLVCDAFPVLVDVL--NWTDSPGCQEKATYILMLMAHKGYGDRQVMI 397

Query: 456 EAKAVEVLREIEETGTERAREKARRVLQTMR 486
           EA     L E+   G+  A+++A R+L+ +R
Sbjct: 398 EAGIESALLELTLLGSALAQKRASRILECLR 428


>AT4G31890.1 | Symbols:  | ARM repeat superfamily protein |
           chr4:15427290-15429049 REVERSE LENGTH=518
          Length = 518

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 10/211 (4%)

Query: 284 NKVRIVRSGFVPFLIDVLKGGFSESQEHAAGAL---FSLALDDDNKMAIGVLGALQPLMH 340
           NK  IV++G V  ++ +++   +  QE A   +     L+  D NK  IG  GA+  L+ 
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279

Query: 341 ALR----SESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXX 396
            L+    + S + R D+  ALY+L++ Q N   +++  ++  LL+ + +  ++ R     
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAIL 339

Query: 397 XXXXXXXEGRTAM-LDGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAK 455
                  EGR A+ L  +A  +LVD+L  N  DS   +E     L  ++H     + +  
Sbjct: 340 SNLVAVPEGRKAIGLVCDAFPVLVDVL--NWTDSPGCQEKATYILMLMAHKGYGDRQVMI 397

Query: 456 EAKAVEVLREIEETGTERAREKARRVLQTMR 486
           EA     L E+   G+  A+++A R+L+ +R
Sbjct: 398 EAGIESALLELTLLGSALAQKRASRILECLR 428


>AT1G67530.2 | Symbols:  | ARM repeat superfamily protein |
           chr1:25308229-25311081 FORWARD LENGTH=782
          Length = 782

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 11/84 (13%)

Query: 24  PPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFS------PNLNGTRPDFSTVI 77
           PP+E  CPIS  LM DPV+++SGQT+ER    VC +  FS      P      P  S + 
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYER----VCIEKWFSDGHNTCPKTQQQLPHIS-LT 326

Query: 78  PNLAIKTTILNWCRKSATPPPCPP 101
           PN  +K  I +WC ++ T  P  P
Sbjct: 327 PNNCVKGLIASWCEQNGTQIPSGP 350


>AT1G67530.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:25308229-25311081 FORWARD LENGTH=782
          Length = 782

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 11/84 (13%)

Query: 24  PPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFS------PNLNGTRPDFSTVI 77
           PP+E  CPIS  LM DPV+++SGQT+ER    VC +  FS      P      P  S + 
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYER----VCIEKWFSDGHNTCPKTQQQLPHIS-LT 326

Query: 78  PNLAIKTTILNWCRKSATPPPCPP 101
           PN  +K  I +WC ++ T  P  P
Sbjct: 327 PNNCVKGLIASWCEQNGTQIPSGP 350


>AT5G01830.1 | Symbols:  | ARM repeat superfamily protein |
           chr5:320983-323007 FORWARD LENGTH=674
          Length = 674

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 13  FHRSSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLN----- 67
           F R  S S    P +F CPI+  LM DPVVV++GQT++R S+    DL      N     
Sbjct: 263 FRRHQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESI----DLWIQSGHNTCPKT 318

Query: 68  GTRPDFSTVIPNLAIKTTILNWCRKSATP 96
           G     ++++PN A+K  I+ WCR    P
Sbjct: 319 GQVLKHTSLVPNRALKNLIVLWCRDQKIP 347


>AT1G24330.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:8631779-8634835 FORWARD LENGTH=771
          Length = 771

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 24  PPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFS------PNLNGTRPDFSTVI 77
           PP+E  CPIS  LM DPV+++SGQT+ER    VC +  FS      P      P  S + 
Sbjct: 275 PPEELRCPISLQLMYDPVIIASGQTYER----VCIEKWFSDGHNSCPKTQQQLPHLS-LT 329

Query: 78  PNLAIKTTILNWCRKSATPPPCPPDYSAVESLVRQAMA 115
           PN  +K  I +WC ++    P  P  S   +  R AM+
Sbjct: 330 PNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMS 367


>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
           chr4:11356143-11357267 REVERSE LENGTH=374
          Length = 374

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 7/207 (3%)

Query: 281 EKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVL-GALQPLM 339
           E  NKV +V  G +  ++ VL+ G  + +  AA  L SLA+ + NK  IG    A+  L+
Sbjct: 166 EDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALV 225

Query: 340 HALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXXXXXX 399
             LR  ++R R +SA ALY L     NR ++V  G VP L+    +G    R        
Sbjct: 226 SLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSG--LERAVEVLGLL 283

Query: 400 XXXXEGRTAMLDGNA-VEILVDLLRRNKFDSEATRENCVAALYALSHGSLRFKGLAKEAK 458
                GR  M   +  VE+LV++LR          +  +  L  L   S       K   
Sbjct: 284 VKCRGGREEMSKVSGFVEVLVNVLRNGNLKG---IQYSLFILNCLCCCSGEIVDEVKREG 340

Query: 459 AVEVLREIEETGTERAREKARRVLQTM 485
            VE+    E+  +E+ R  A  ++ T+
Sbjct: 341 VVEICFGFEDNESEKIRRNATILVHTL 367



 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 12/72 (16%)

Query: 25 PKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLNGTRP-------DFSTVI 77
          P +F CPIS  +MSDPV++ SG TF+R+S+Q     ++  + N T P       +   +I
Sbjct: 6  PNDFRCPISLEIMSDPVILQSGHTFDRVSIQ-----QWIDSGNRTCPITKLPLSETPYLI 60

Query: 78 PNLAIKTTILNW 89
          PN A+++ ILN+
Sbjct: 61 PNHALRSLILNF 72


>AT5G37490.1 | Symbols:  | ARM repeat superfamily protein |
           chr5:14887744-14889051 FORWARD LENGTH=435
          Length = 435

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 11  ISFHRSSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQ--VCNDLKFSPNLNG 68
           +S+  S   S++  P EF CPIS  LM DPV++S+G T++R+S++  + +  K  P  N 
Sbjct: 18  LSWPESEPESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNT 77

Query: 69  TRPDFSTVIPNLAIKTTILNWCRKSATP 96
               F   IPN  I+  I  WC +  +P
Sbjct: 78  VLTTFDQ-IPNHTIRKMIQGWCVEKGSP 104


>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
           chr1:10264412-10266601 FORWARD LENGTH=729
          Length = 729

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 11/117 (9%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQV------CNDLKFSPNLNGTRPDFSTVIP 78
           PK+F+CPIS  LM+DPV++S+GQT++R S+        C   K    L  +R     ++P
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSR-----IVP 360

Query: 79  NLAIKTTILNWCRKSATPPPCPPDYSAVESLVRQAMAAEPQESVRVSEKELLKAVAD 135
           N A+K  I+ WC  S          S  ES           E+ + +   L+K +AD
Sbjct: 361 NRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLAD 417



 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 17/224 (7%)

Query: 279 SLEKTNKVRIVRSG-FVPFLIDVLKGGFS-ESQEHAAGALFSLALDDDNKMAIGVLG-AL 335
           S+ + NK RI+  G  +  ++ VL  G + E+QE+AA  LFSL+   + K  I ++   +
Sbjct: 476 SIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCV 535

Query: 336 QPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRXXXX 395
           + L   L++ + R + D+  ALY+L+    N  ++++ G V +L+  + N  +A      
Sbjct: 536 EALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGA 595

Query: 396 XXXXXXXXEGRTAM-LDGNAVEILVDLLRRNKFDSEATRENCVAALYAL--SHGSLRFKG 452
                    G  A+  + +AV  L+ ++R     +   +EN VAAL  L  S G+   + 
Sbjct: 596 LALLVRQSLGAEAIGKEDSAVAGLMGMMR---CGTPRGKENAVAALLELCRSGGAAVAEK 652

Query: 453 LAKEAKAVEVLREIEETGTERAREKA---RRVLQ-----TMRAG 488
           + +      +L+ +  TGT+RAR KA    RV Q      MR+G
Sbjct: 653 VLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQRRENAAMRSG 696


>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
           chr1:9720962-9723975 REVERSE LENGTH=768
          Length = 768

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 10/85 (11%)

Query: 24  PPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLN---GTRPDFS--TVIP 78
           PP+E  CPIS  LM DPV+++SGQT+ER    +C +  FS   N    T    S   + P
Sbjct: 279 PPEELRCPISLQLMYDPVIIASGQTYER----ICIEKWFSDGHNTCPKTHQQLSHLCLTP 334

Query: 79  NLAIKTTILNWCRKSATP-PPCPPD 102
           N  +K  I +WC ++    P  PP+
Sbjct: 335 NYCVKALISSWCEQNGVQVPDGPPE 359


>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
           chr1:18429024-18430289 REVERSE LENGTH=421
          Length = 421

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 10/103 (9%)

Query: 22  LEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQ--VCNDLKFSPNLNGTRPDFSTVIPN 79
           ++ P  F CPIS  LMSDPV +S+GQT++R S+   +       P       DF T+IPN
Sbjct: 12  IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDF-TLIPN 70

Query: 80  LAIKTTILNWCRKSAT-------PPPCPPDYSAVESLVRQAMA 115
             ++  I  WC  + +        P  P D  +V SL+ QA A
Sbjct: 71  HTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASA 113


>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
           chr3:6714602-6715867 REVERSE LENGTH=421
          Length = 421

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 17/144 (11%)

Query: 22  LEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLNGTRPDFS--TVIPN 79
           ++ P  F CPIS  LM DPV V +GQT++R S++    +  +     TR   S  T+IPN
Sbjct: 12  IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71

Query: 80  LAIKTTILNWCRKSAT-------PPPCPPDYSAVESLVRQAMAAE-PQESVRVSEKEL-- 129
             ++  I  WC  + +        P  P D ++V +L+ QA A      SVR     L  
Sbjct: 72  HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRR 131

Query: 130 LKAVA----DNPVMIGFSHAATEL 149
           L+  A     N V+I  +H ATE+
Sbjct: 132 LRGFARDSDKNRVLIA-AHNATEI 154


>AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 |
           chr2:18511719-18515762 REVERSE LENGTH=930
          Length = 930

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 279 SLEKTNKVRIVRSGFVPFLIDVLKGGFSES---QEHAAGALFSLALDDDNKMAIGVLGAL 335
           S +  N+  I  +G V  L+ + +   + S   QE AAGAL+ L++ + N +AIG  G +
Sbjct: 638 SFDDKNRESISVAGGVEALVALAQSCSNASTGLQERAAGALWGLSVSEANSVAIGREGGV 697

Query: 336 QPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVAN 385
            PL+   RSE+E     +A AL++L     N +++V+ G VP L+ + ++
Sbjct: 698 PPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCSS 747


>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
           chr2:15083101-15084336 REVERSE LENGTH=411
          Length = 411

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 17/128 (13%)

Query: 21  KLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLNG---TRPDFS--T 75
           ++E P  FLCPIS  +M DPV+VS+G T++R S++      F+   N    T+ D +   
Sbjct: 9   EIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIE---KWLFAGKKNSCPVTKQDITDAD 65

Query: 76  VIPNLAIKTTILNWCRKSAT------PPPCPPDY-SAVESLVRQAMAAEPQESVRVSEKE 128
           + PN  ++  I +WC  +A+      P P PP   S +E L+R   +A   E+     K 
Sbjct: 66  LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRD--SASSHENQVKCLKR 123

Query: 129 LLKAVADN 136
           L + V++N
Sbjct: 124 LRQIVSEN 131


>AT4G36550.1 | Symbols:  | ARM repeat superfamily protein |
           chr4:17245400-17247926 REVERSE LENGTH=718
          Length = 718

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 25  PKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDL-KFSPNLNGTRPDFSTVIPNLAIK 83
           P++F C +S ++M DPV++SSG TFER+ +Q   D    S  ++  + D  T+ PN+ +K
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279

Query: 84  TTILNWCRKSA 94
           + I  WC K+ 
Sbjct: 280 SQISEWCAKNG 290


>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
           chr3:19440943-19442250 REVERSE LENGTH=435
          Length = 435

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 17/106 (16%)

Query: 21  KLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLNGTRPDFSTVI--- 77
           ++E P  FLCPIS  +M DPV+VS+G T++R S++      FS   N   P    VI   
Sbjct: 4   EIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIE---KWLFSGKKNSC-PVTKQVITET 59

Query: 78  ---PNLAIKTTILNWCRKSAT------PPPCPPDY-SAVESLVRQA 113
              PN  ++  I +WC  +A+      P P PP   S +E L++++
Sbjct: 60  DLTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKES 105


>AT5G18340.1 | Symbols:  | ARM repeat superfamily protein |
           chr5:6070640-6072198 REVERSE LENGTH=456
          Length = 456

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 18/105 (17%)

Query: 15  RSSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFER--LSVQVCNDLKFSPNLNGTRPD 72
           R S  S +E PKEF C +S ++M DPV++ SGQT+E+  ++  + +DL        T P 
Sbjct: 65  RESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHDL--------TCPT 116

Query: 73  FSTVI------PNLAIKTTILNWC--RKSATPPPCPPDYSAVESL 109
              V+      PN  I   I  WC   K   P P P D   V  L
Sbjct: 117 AKQVLYRVCLTPNHLINELITRWCLANKYDRPAPKPSDIDYVTEL 161


>AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 |
           chr3:22306806-22310596 REVERSE LENGTH=928
          Length = 928

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 3/136 (2%)

Query: 253 LSALRLLVESRYXXXXXXXXXXXXXXSLEKTNKVRIVRSGFVPFLIDVLKGGFSES---Q 309
           L AL  L +S +              + +  N+  I   G V  L+ + K   + S   Q
Sbjct: 603 LEALVQLTQSPHEGVKQEAAGALWNLAFDDKNRESIAAFGGVEALVALAKSSSNASTGLQ 662

Query: 310 EHAAGALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRVK 369
           E  AGAL+ L++ + N +AIG  G + PL+  +RSE+E     +A AL++L+    N ++
Sbjct: 663 ERVAGALWGLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALR 722

Query: 370 LVKLGVVPTLLSMVAN 385
           +V+ G V  L+ + ++
Sbjct: 723 IVEEGGVVALVQLCSS 738


>AT3G61390.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:22716418-22718270 FORWARD LENGTH=435
          Length = 435

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 16  SSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTF--ERLSVQVCNDLKFSPNLNGTRPDF 73
           +S+ +  EPP+ F+CPI+  +M DP V + G T+  E +S       + SP +N   P  
Sbjct: 345 ASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLP-H 403

Query: 74  STVIPNLAIKTTILNW 89
           ++++PNLA+++ I  W
Sbjct: 404 TSLVPNLALRSAIQEW 419


>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
           protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
          Length = 431

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 11/98 (11%)

Query: 2   GGNGKHRWKISFHRSSSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLK 61
           GG+   +  I     S   ++  P +F CPIS  LM DPV+++SG T++R +++     K
Sbjct: 11  GGSVSKKEIIPVTSCSEEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIE-----K 65

Query: 62  FSPNLNGTRPDFSTV------IPNLAIKTTILNWCRKS 93
           +  +   T P  +TV      IPN  I+  I  WC  S
Sbjct: 66  WFESGYQTCPVTNTVLTSLEQIPNHTIRRMIQGWCGSS 103


>AT5G18320.1 | Symbols:  | ARM repeat superfamily protein |
           chr5:6064431-6066186 REVERSE LENGTH=458
          Length = 458

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 17  SSHSKLEPPKEFLCPISGSLMSDPVVVSSGQTFERLSVQVCNDLKFSPNLNGTRPDFS-- 74
           S  S +E PKEF+C +S ++M +PV+++SGQT+E+    +   LK       T+   S  
Sbjct: 65  SDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKR--YITEWLKHERTCPKTKQVLSHR 122

Query: 75  TVIPNLAIKTTILNWCRKSATPPPCPPD 102
             IPN  I   I  WC  +      P D
Sbjct: 123 LWIPNHLISDLITQWCLVNKYDHQKPSD 150



 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 117/292 (40%), Gaps = 16/292 (5%)

Query: 208 SEEEARLVKMMKSNEVFEQEEGVVMLRSVTRNREEARVSLC------TPRLLSALRLL-- 259
           S+ EA L ++  S+ V +Q E    LR  T+     RV           RLLS L  L  
Sbjct: 159 SDIEALLQRVSSSSSVADQIEAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDE 218

Query: 260 -VESRYXXXXXXXXXXXXXXSLEKTNKVRIVRSGFV-PFLIDVLKGGFSESQEHAAGALF 317
            V+S                 LE +NK  I  +  V P L   LK G  E++ +AA  L 
Sbjct: 219 AVDSSLELQENIVTALFNLSILE-SNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLS 277

Query: 318 SLALDDDNKMAIGVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVP 377
           SL+  D NK+ IG   A++ L+  +         ++   +++L +V  N+ K+V  G++ 
Sbjct: 278 SLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIH 337

Query: 378 TLLSMVANGNLASRXXXXXXXXXXXXEGRTAMLDGNAVEILVDLLRRNKFDSEATRENCV 437
                +  G+                     M     +  L  +LR  K  S  T EN V
Sbjct: 338 AATKKIKAGSNVDELLSLLALISTHNRAVEEMDKLGFIYDLFSILR--KPSSLLTGENAV 395

Query: 438 AA---LYALSHGSLRFKGLAKEAKAVEVLREIEETGTERAREKARRVLQTMR 486
                +Y  +    R K + +E        ++ + G+ RA  KA+ +LQ ++
Sbjct: 396 VIVFNMYDRNRDRSRLKVVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIK 447


>AT3G03440.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:815709-818568 FORWARD LENGTH=408
          Length = 408

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 10/216 (4%)

Query: 281 EKTNKVRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMH 340
           ++ NKV I+ +G +  +I+ L+      QE+A+ +L +L+   +NK  IG  G +  L+ 
Sbjct: 136 DEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLVK 195

Query: 341 ALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVPTLLSMVANGNLASRX-----XXX 395
            ++  S + + D+ +AL +L+ +  N   ++    +  +L+++ +   +S+         
Sbjct: 196 VIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLI 255

Query: 396 XXXXXXXXEGRTAML-DGNAVEILVDLLRRNKFDSEATRENCVAALYALSHGSL-RFKGL 453
                   E RT ++ D   V  +V++L      +   RE+ V  L  L      +++  
Sbjct: 256 EALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQA---REHAVGVLLTLCQSDRSKYREP 312

Query: 454 AKEAKAVEVLREIEETGTERAREKARRVLQTMRAGE 489
                 +  L E+   GT ++R KA+R+L  +R  E
Sbjct: 313 ILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNSE 348