Miyakogusa Predicted Gene

Lj1g3v0415470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0415470.1 Non Chatacterized Hit- tr|I3T3Z5|I3T3Z5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,DUF393,Putative thiol-disulphide oxidoreductase DCC;
Thioredoxin-like,Thioredoxin-like fold; seg,NUL,CUFF.25754.1
         (216 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G50100.1 | Symbols:  | Putative thiol-disulphide oxidoreducta...   239   8e-64

>AT5G50100.1 | Symbols:  | Putative thiol-disulphide oxidoreductase
           DCC | chr5:20371916-20373172 FORWARD LENGTH=214
          Length = 214

 Score =  239 bits (611), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 117/173 (67%), Positives = 137/173 (79%), Gaps = 4/173 (2%)

Query: 48  GSQCHIRAI---SEAAAVEPAISKKEGDGRDWKIKILYDGDCPLCMREVNMLRERNKSYG 104
           G +  +RAI   S    + P  +++E   ++WKIK+LYDGDCPLCMREVNML ERN+ +G
Sbjct: 42  GFKYQVRAIQGTSTDPVITPLKNREEPKPQNWKIKMLYDGDCPLCMREVNMLMERNEKHG 101

Query: 105 TIKFVDIGSDDYSPEENQGLDYETAMGRIHAVLSDGTVVTDVEAFRRLYEQVGLGWVYAI 164
           TIKFVDI S+DYSPE+NQGLDY+T MG+IHA+ SDG VV  VEAFRRLYE+VGLGWVY I
Sbjct: 102 TIKFVDISSNDYSPEDNQGLDYKTVMGQIHAIQSDGNVVKGVEAFRRLYEEVGLGWVYTI 161

Query: 165 TKYEPIAKIADSVYGVWAKYRLQVTGRPSIEEILEARKK-KGEVCKNSNACKM 216
           TK+EPI K+AD VY VWAKYRLQVTGRPSIE ILEARKK K E C  S  CK+
Sbjct: 162 TKFEPIGKLADVVYDVWAKYRLQVTGRPSIEAILEARKKDKVETCGESKNCKI 214