Miyakogusa Predicted Gene
- Lj1g3v0415390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0415390.1 Non Chatacterized Hit- tr|Q9STT0|Q9STT0_ARATH
Putative uncharacterized protein T23J7.160 OS=Arabidop,68.75,8e-19,
,CUFF.25756.1
(94 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62575.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 105 7e-24
AT5G62575.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 104 1e-23
AT3G47833.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 87 3e-18
>AT5G62575.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G47833.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source:
NCBI BLink). | chr5:25117542-25118565 FORWARD LENGTH=99
Length = 99
Score = 105 bits (261), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 67/90 (74%)
Query: 1 MAFLLNKTTIASHFRSQSQKTGDFTSLPRRQFHIEPGTRXXXXXXXXXXXXPFKSYKKSV 60
MAFLLN +I+SH RS S +TGD S+ RR FHIEPGTR FKS+KKSV
Sbjct: 1 MAFLLNNASISSHLRSSSSQTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKSV 60
Query: 61 KQLRRIGDVLTIVVVAGCCYEIYVKAVVKE 90
+L+RIGDVLT+VVVAGCCYEIYVKAV+K+
Sbjct: 61 HKLKRIGDVLTVVVVAGCCYEIYVKAVMKK 90
>AT5G62575.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G47833.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr5:25117542-25118565 FORWARD LENGTH=100
Length = 100
Score = 104 bits (259), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 1 MAFLLNKTTIASHFRSQS-QKTGDFTSLPRRQFHIEPGTRXXXXXXXXXXXXPFKSYKKS 59
MAFLLN +I+SH RS S QKTGD S+ RR FHIEPGTR FKS+KKS
Sbjct: 1 MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60
Query: 60 VKQLRRIGDVLTIVVVAGCCYEIYVKAVVKE 90
V +L+RIGDVLT+VVVAGCCYEIYVKAV+K+
Sbjct: 61 VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKK 91
>AT3G47833.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:17648721-17649829
FORWARD LENGTH=93
Length = 93
Score = 86.7 bits (213), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 1 MAFLLNKTTIASHFRSQSQKTGDFTSLPRRQFHIEPGTRXXXXXXXXXXXXPFKSYKKSV 60
MAFLLN T+I+SH RS SQKT + RR FH+E G R FKS+KK V
Sbjct: 1 MAFLLN-TSISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 59
Query: 61 KQLRRIGDVLTIVVVAGCCYEIYVKAVVKESQ 92
+L+RIGDVLT+VVVAGCCYEIY + + KE+Q
Sbjct: 60 HRLKRIGDVLTVVVVAGCCYEIYARVMRKEAQ 91