Miyakogusa Predicted Gene
- Lj1g3v0415370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0415370.1 Non Chatacterized Hit- tr|J3MX45|J3MX45_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,44.88,3e-19,DUF4228,Protein of unknown function
DUF4228,CUFF.25745.1
(177 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50090.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 150 3e-37
AT5G50090.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 147 3e-36
AT1G60010.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 140 4e-34
AT1G10530.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 127 4e-30
AT5G62900.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 127 5e-30
AT5G67620.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 92 2e-19
>AT5G50090.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: cellular_component
unknown; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria -
0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses -
0; Other Eukaryotes - 339 (source: NCBI BLink). |
chr5:20369961-20370878 FORWARD LENGTH=159
Length = 159
Score = 150 bits (380), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 113/175 (64%), Gaps = 21/175 (12%)
Query: 1 MGNCQAIDAATIVIQHPNGKVERFYSPMSARLVMKMNPAHYVALLISTSTLSPNKDIGNC 60
MGNCQA+D A +VIQHPNGK E+ P+SA VMKMNP H V+LLIST+
Sbjct: 1 MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTA---------- 50
Query: 61 PNKNSDTNTNNTYPVRLTRIKLLKPNDSLLLGHVYRLITAQEVMKGLKERKQAKMKQNMP 120
S ++ + P+RLTRIKLL+P D+L+LGHVYRLIT +EVMKGL +K +K+K+
Sbjct: 51 ---LSSASSGHGGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESK 107
Query: 121 GSGHKSDWVKGKIGLEMDNKAERRLDTEDNKVTKPEKPRPR-TRFWQPSLQSISE 174
GS K + VK ++DN+ + ++ K EK R R +R WQPSLQSISE
Sbjct: 108 GSDDKLEMVKAINSTKLDNEDQLQMK-------KQEKERSRISRSWQPSLQSISE 155
>AT5G50090.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G62900.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr5:20369961-20370878 FORWARD LENGTH=153
Length = 153
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 110/175 (62%), Gaps = 27/175 (15%)
Query: 1 MGNCQAIDAATIVIQHPNGKVERFYSPMSARLVMKMNPAHYVALLISTSTLSPNKDIGNC 60
MGNCQA+D A +VIQHPNGK E+ P+SA VMKMNP H V+LLIST+
Sbjct: 1 MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTA---------- 50
Query: 61 PNKNSDTNTNNTYPVRLTRIKLLKPNDSLLLGHVYRLITAQEVMKGLKERKQAKMKQNMP 120
S ++ + P+RLTRIKLL+P D+L+LGHVYRLIT +EVMKGL +K +K+K+
Sbjct: 51 ---LSSASSGHGGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESK 107
Query: 121 GSGHKSDWVKGKIGLEMDNKAERRLDTEDNKVTKPEKPRPR-TRFWQPSLQSISE 174
GS K + VK ++DN ED EK R R +R WQPSLQSISE
Sbjct: 108 GSDDKLEMVKAINSTKLDN--------EDQ-----EKERSRISRSWQPSLQSISE 149
>AT1G60010.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G10530.1);
Has 185 Blast hits to 185 proteins in 18 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr1:22095660-22096434 REVERSE LENGTH=173
Length = 173
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 20/185 (10%)
Query: 1 MGNCQAIDAATIVIQHPNGKVERFYSPMSARLVMKMNPAHYVALLISTSTLSPNKDIGNC 60
MGNCQA+DAA +V+QHP+GK++R+Y P+S +M+M P HYV+L+I P K+I
Sbjct: 1 MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIPL----PEKNIPAT 56
Query: 61 PNKNSDTNTNNTYPVRLTRIKLLKPNDSLLLGHVYRLITAQEVMKGLKERKQAKMKQNMP 120
D + VR TR+KLL+P ++L+LGH YRLIT+QEVMK L+ +K AK K+
Sbjct: 57 TTTTDDKSERKV--VRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKK--- 111
Query: 121 GSGHKSDWVKGKIGLEMDNKAERRLDTEDNKVTKPEKPR--------PRTRFWQPSLQSI 172
H+S+ K K + K + D N TK EK R R++ W+PSLQSI
Sbjct: 112 ---HQSETSKEKKKPSSEKKIDEESDKNQNLETKDEKQRSVLTNSASSRSKTWRPSLQSI 168
Query: 173 SEVVG 177
SE
Sbjct: 169 SEATS 173
>AT1G10530.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G60010.1);
Has 143 Blast hits to 143 proteins in 14 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:3471805-3472526 REVERSE LENGTH=166
Length = 166
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 11/174 (6%)
Query: 1 MGNCQAIDAATIVIQHPNGKVERFYSPMSARLVMKMNPAHYVALLISTSTLSPNKDIGNC 60
MGNCQA++AA +V+QHP G ++R+YS +S VM M P HYV+L+I S ++ N
Sbjct: 1 MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLS----EEEEKNI 56
Query: 61 PNKNSDTNTNNTYPVRLTRIKLLKPNDSLLLGHVYRLITAQEVMKGLKERKQAKMKQNMP 120
P + VR TR++LL+P ++L+LGH YRLIT+QEVMK L+E+K AK K++
Sbjct: 57 PATEKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKKHQI 116
Query: 121 GSGHKSDWVKGKIGLEMDNKAERRLDTEDNKVTKPEKPRPRTRFWQPSLQSISE 174
+ D K + + +V + +++ W+PSLQSISE
Sbjct: 117 EKTTTAKKFS-------DKKVPEKKQGKQFRVIRNSTSLLKSKTWRPSLQSISE 163
>AT5G62900.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G50090.1);
Has 157 Blast hits to 157 proteins in 14 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:25248872-25249725 FORWARD LENGTH=161
Length = 161
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 24/178 (13%)
Query: 1 MGNCQAIDAATIVIQHPNGKVERFYSPMSARLVMKMNPAHYVALLISTSTLSPNKDIGNC 60
MGNCQA +AAT VIQ P+GK RFY ++A V+K +P H+VALL+S++
Sbjct: 1 MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLLSSAV---------- 50
Query: 61 PNKNSDTNTNNTYPVRLTRIKLLKPNDSLLLGHVYRLITAQEVMKGLKERKQAKMKQNMP 120
P+ S +R+TRIKLL+P+D+LLLGHVYRLI+++EVMKG++ +K KMK+ +
Sbjct: 51 PHGGS---------LRVTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKSGKMKK-IH 100
Query: 121 GSGHKSDWVKGKIGLE----MDNKAERRLDTEDNKVTKPEKPRPRTRFWQPSLQSISE 174
G ++ + L D +RR+ + + + R WQPSLQSISE
Sbjct: 101 GEFSVAEEEINPLTLRSESASDKDTQRRIHEKQRGMMNTGGATNKVRAWQPSLQSISE 158
>AT5G67620.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: N-terminal
protein myristoylation; LOCATED IN: microtubule; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:26964891-26965720
REVERSE LENGTH=182
Length = 182
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 33/165 (20%)
Query: 1 MGNCQAIDAATIVIQHP-NGKVERFYSPMSARLVMKMNPAHYVALLISTSTLSPNKDIGN 59
MGNCQA +AAT++I HP KVER Y ++A +MK NP HYVA+++++ T+ K +
Sbjct: 1 MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTSPTMKNEKGL-- 58
Query: 60 CPNKNSDTNTNNTYPVRLTRIKLLKPNDSLLLGHVYRLITAQEVMKGLKERKQAKMKQNM 119
L ++KLL+P+D+LL+GHVYRL++ +EV+ +K K+ + +
Sbjct: 59 ----------------PLKQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLL 102
Query: 120 PGSGHKSDWVKGKIGLEM----DNKAERRLDTEDNKVTKPEKPRP 160
G GL++ +++LD E KV P P
Sbjct: 103 KEGG----------GLDLTKKKTKHRKKKLDQETGKVNPNSDPNP 137