Miyakogusa Predicted Gene
- Lj1g3v0415230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0415230.1 Non Chatacterized Hit- tr|I3T588|I3T588_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.05,0,RASTRNSFRMNG,Small GTPase superfamily; seg,NULL;
small_GTP: small GTP-binding protein domain,Small G,CUFF.25732.1
(211 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-lik... 358 2e-99
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-relat... 356 6e-99
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 316 6e-87
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 316 6e-87
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 316 8e-87
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |... 314 2e-86
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP... 314 3e-86
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related... 314 3e-86
AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 310 5e-85
AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 310 5e-85
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-l... 310 5e-85
AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-l... 306 5e-84
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-r... 305 1e-83
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-lik... 273 5e-74
AT3G51290.2 | Symbols: | Protein of unknown function (DUF630) ;... 262 1e-70
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 101 3e-22
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 101 4e-22
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 96 2e-20
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 96 2e-20
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 96 2e-20
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 96 2e-20
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 96 2e-20
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 96 2e-20
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 96 2e-20
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 94 8e-20
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 92 3e-19
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 92 3e-19
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 92 4e-19
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 91 4e-19
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 91 6e-19
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 89 2e-18
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 88 3e-18
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 88 3e-18
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 88 4e-18
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 88 5e-18
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 87 6e-18
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 87 8e-18
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 87 1e-17
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 87 1e-17
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 87 1e-17
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 86 2e-17
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 85 3e-17
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 85 4e-17
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 85 4e-17
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 84 6e-17
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 84 6e-17
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 84 6e-17
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 84 7e-17
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 84 8e-17
AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 84 1e-16
AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 84 1e-16
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 84 1e-16
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 84 1e-16
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 83 1e-16
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 83 1e-16
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 83 1e-16
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 83 1e-16
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 82 3e-16
AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25... 82 4e-16
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 80 8e-16
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 79 2e-15
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 79 2e-15
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPas... 79 2e-15
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 79 2e-15
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 79 2e-15
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 79 3e-15
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 78 4e-15
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 76 2e-14
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 75 3e-14
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 75 4e-14
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 75 4e-14
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 75 4e-14
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 75 4e-14
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase ho... 73 1e-13
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 72 2e-13
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 72 3e-13
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 72 3e-13
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 72 3e-13
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 72 4e-13
AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 71 4e-13
AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D... 70 8e-13
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 70 9e-13
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 69 2e-12
AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A | chr4:61... 68 4e-12
AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:972... 66 1e-11
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |... 66 1e-11
AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 66 2e-11
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 65 3e-11
AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | ... 62 2e-10
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 62 3e-10
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 62 4e-10
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 62 4e-10
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | c... 61 6e-10
AT5G37680.1 | Symbols: ATARLA1A, ARLA1A | ADP-ribosylation facto... 50 8e-07
AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 49 2e-06
AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-bind... 49 3e-06
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like
10 | chr5:25237236-25238939 FORWARD LENGTH=215
Length = 215
Score = 358 bits (919), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/215 (80%), Positives = 183/215 (85%), Gaps = 5/215 (2%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGL 60
MAS+AS+FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV+EG TVNLGL
Sbjct: 1 MASSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGL 60
Query: 61 WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGT 120
WDTAGQEDYNRLRPLSYRGADVFVL+FSLVSRASYENV KKWIPELQHFAPGVP+VLVGT
Sbjct: 61 WDTAGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGT 120
Query: 121 KLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
KLDLREDKHYLADHPGL PVT+ QGEEL K IGATYYIECSSKTQQNVK +FD+AI+ VI
Sbjct: 121 KLDLREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVI 180
Query: 181 X-----XXXXXXXXXXXXXXGCFLNVLCGRNIVRH 210
GC NVLCGR + RH
Sbjct: 181 KPLVKQKEKTKKKKKQKSNHGCLSNVLCGRIVTRH 215
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-related
protein from plants 10 | chr3:17731561-17733241 FORWARD
LENGTH=208
Length = 208
Score = 356 bits (914), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 168/208 (80%), Positives = 182/208 (87%), Gaps = 2/208 (0%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGL 60
MAS+AS+FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS NVV+EGITVNLGL
Sbjct: 1 MASSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGL 60
Query: 61 WDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGT 120
WDTAGQEDYNRLRPLSYRGADVFVLAFSL+SRASYENV KKWIPELQHFAPGVP+VLVGT
Sbjct: 61 WDTAGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGT 120
Query: 121 KLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
K+DLRED+HYL+DHPGL PVT+ QGEEL K IGATYYIECSSKTQQNVK +FDAAI++VI
Sbjct: 121 KMDLREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVI 180
Query: 181 XXXXXXXXXXXXXX--XGCFLNVLCGRN 206
GC N+LCG+N
Sbjct: 181 KPAVKQKEKKKKQKPRSGCLSNILCGKN 208
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 316 bits (810), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 145/177 (81%), Positives = 163/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRFIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVV+ G TVNLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+H+APGVP+VLVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + DHPG VP+T+ QGEEL K IGA YIECSSKTQ+NVKG+FDAAIR+V+
Sbjct: 122 LRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVL 178
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 316 bits (810), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 145/177 (81%), Positives = 163/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRFIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVV+ G TVNLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+H+APGVP+VLVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + DHPG VP+T+ QGEEL K IGA YIECSSKTQ+NVKG+FDAAIR+V+
Sbjct: 122 LRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVL 178
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
RHO-related protein from plants 1 |
chr3:19043197-19044215 FORWARD LENGTH=197
Length = 197
Score = 316 bits (809), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 163/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRF+KCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVV+ G TVNLGLWDT
Sbjct: 2 SASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+H+APGVP+VLVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + DHPG VP+T+ QGEEL KQIGA YIECSSKTQ+NVK +FDAAIR+V+
Sbjct: 122 LRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVL 178
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |
RAC-like 6 | chr4:17024051-17025514 REVERSE LENGTH=197
Length = 197
Score = 314 bits (805), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 163/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRFIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVV+ G TVNLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+H+APGVP+VLVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + DHPG VP+T+ QGEEL K IGA YIECSSK+Q+NVKG+FDAAIR+V+
Sbjct: 122 LRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 178
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP
binding protein 5 | chr1:28475964-28477377 FORWARD
LENGTH=196
Length = 196
Score = 314 bits (805), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 163/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRFIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVV++G TVNLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+H+APGVP++LVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + DHPG VP+T+ QGEEL K IG+ YIECSSKTQQNVK +FDAAI++V+
Sbjct: 122 LRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related
protein from plants 2 | chr1:6967223-6968603 FORWARD
LENGTH=195
Length = 195
Score = 314 bits (805), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 142/176 (80%), Positives = 162/176 (92%)
Query: 5 ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDTA 64
ASRFIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVV++G TVNLGLWDTA
Sbjct: 2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTA 61
Query: 65 GQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDL 124
GQEDYNRLRPLSYRGADVF+LAFSL+S+ASYEN+ KKWIPEL+H+APGVP++LVGTKLDL
Sbjct: 62 GQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDL 121
Query: 125 REDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
R+DK + DHPG VP+T+ QGEEL K IG+ YIECSSKTQQNVK +FDAAI++V+
Sbjct: 122 RDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVL 177
>AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 310 bits (794), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 164/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRFIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV+++G T+NLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSLVS+ASYENV KKW+PEL+H+APGVP++LVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + A+HPG VP+++ QGEEL K IGA YIECS+KTQQNVK +FDAAI++V+
Sbjct: 122 LRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 310 bits (794), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 164/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRFIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV+++G T+NLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSLVS+ASYENV KKW+PEL+H+APGVP++LVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + A+HPG VP+++ QGEEL K IGA YIECS+KTQQNVK +FDAAI++V+
Sbjct: 122 LRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-like
3 | chr4:16673176-16674540 FORWARD LENGTH=198
Length = 198
Score = 310 bits (794), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 164/177 (92%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ASRFIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV+++G T+NLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSLVS+ASYENV KKW+PEL+H+APGVP++LVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK + A+HPG VP+++ QGEEL K IGA YIECS+KTQQNVK +FDAAI++V+
Sbjct: 122 LRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-like
2 | chr5:18643761-18645758 FORWARD LENGTH=201
Length = 201
Score = 306 bits (785), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 137/177 (77%), Positives = 159/177 (89%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+ +RFIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVV++G TVNLGLWDT
Sbjct: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYEN+ KKW+PEL+H+APG+P+VLVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK +L DHPG +T+ QGEEL K IGA Y+ECSSKTQQNVK +FD AIR+ +
Sbjct: 122 LRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 |
RHO-related protein from plants 9 |
chr4:14278289-14279705 FORWARD LENGTH=209
Length = 209
Score = 305 bits (782), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 161/177 (90%), Gaps = 2/177 (1%)
Query: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDT 63
+AS+FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV ++G VNLGLWDT
Sbjct: 2 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDT 61
Query: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLD 123
AGQEDY+RLRPLSYRGAD+FVLAFSL+S+ASYENVLKKW+PEL+ FAP VP+VLVGTKLD
Sbjct: 62 AGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLD 121
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
LR+DK YLADH + +TS QGEEL KQIGA YIECSSKTQQNVK +FD AI++V+
Sbjct: 122 LRDDKGYLADHTNV--ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 176
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-like 9
| chr2:18429276-18430636 FORWARD LENGTH=209
Length = 209
Score = 273 bits (699), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 150/173 (86%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDTAGQE 67
FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNF+ANV+++G TVNLGLWDTAGQE
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77
Query: 68 DYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLRED 127
DYNR+RPLSYRGADVF+LAFSL+SR S+EN+ KKW+PEL+H+AP VP+VLVGTK DLR++
Sbjct: 78 DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDN 137
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
+ ++PG + EQG+EL K+IGA YIECSSK Q NVK +FD AI++V+
Sbjct: 138 MQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVL 190
>AT3G51290.2 | Symbols: | Protein of unknown function (DUF630)
;Protein of unknown function (DUF632) |
chr3:19039980-19044215 FORWARD LENGTH=798
Length = 798
Score = 262 bits (669), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 117/145 (80%), Positives = 133/145 (91%)
Query: 36 DYIPTVFDNFSANVVMEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASY 95
DY+PTVFDNFSANVV+ G TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+S+ASY
Sbjct: 635 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 694
Query: 96 ENVLKKWIPELQHFAPGVPVVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGAT 155
ENV KKWIPEL+H+APGVP+VLVGTKLDLR+DK + DHPG VP+T+ QGEEL KQIGA
Sbjct: 695 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAP 754
Query: 156 YYIECSSKTQQNVKGIFDAAIRMVI 180
YIECSSKTQ+NVK +FDAAIR+V+
Sbjct: 755 TYIECSSKTQENVKAVFDAAIRVVL 779
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 15/168 (8%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV--MEGITVNLGLWDTAGQ 66
+K V +GD VGK+C+++ + +F TV +F + + + TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y+ L PL YRGA V V+ + + S S++ + W+ ELQ H +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKKA-QYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
E + V +E G EL+++ G ++IE S+KT N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNG-MFFIETSAKTADNINQLFE 189
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 15/168 (8%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV--MEGITVNLGLWDTAGQ 66
+K V +GD VGK+C+++ + +F TV +F + + + TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y+ L PL YRGA V V+ + + S S++ + W+ ELQ H +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKKA-QYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
E + V +E G EL+++ G ++IE S+KT N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNG-MFFIETSAKTADNINQLFE 189
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ F T +I T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + WI + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPKSKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ F T +I T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + WI + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V + +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPTAKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ F T +I T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + WI + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPKSKGQALADEYGMKFF-ETSAKTNLNVEEVF 170
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ F T +I T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + WI + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V + +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPTAKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ F T +I T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + WI + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPKSKGQALADEYGMKFF-ETSAKTNLNVEEVF 170
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ F T +I T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + WI + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPKSKGQALADEYGMKFF-ETSAKTNLNVEEVF 170
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ F T +I T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + WI + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V + +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPTAKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 20/178 (11%)
Query: 1 MASTASRFI--KCVTVGDGAVGKTCMLICYTSNKF---PTDYIPTVFDNFSANVVMEGIT 55
MAS+ ++ I K V +GD GK+ +++ + ++F I F FS + + T
Sbjct: 1 MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDAT 58
Query: 56 VNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVP 114
V +WDTAGQE Y+ L P+ YRGA ++ F + ++AS+E KKW+ ELQ P +
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERA-KKWVQELQAQGNPNMV 117
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ L G K DL + + V++E+ E+ Q + +++E S+KT NVK IF
Sbjct: 118 MALAGNKADLLDARK----------VSAEEA-EIYAQENSLFFMETSAKTATNVKDIF 164
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K + +GD VGK+C+L+ +T +F + T+ F A +V ++G + L +WDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTAGQ 65
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + R ++ N L W+ + QH P + ++L+G K DL
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQHANPNMSIMLIGNKCDLA 124
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ V+ E+G++ +K+ G ++E S++T QNV+ F
Sbjct: 125 HKR----------AVSKEEGQQFAKEHG-LLFLEASARTAQNVEEAF 160
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 20/178 (11%)
Query: 1 MASTASRFI--KCVTVGDGAVGKTCMLICYTSNKF---PTDYIPTVFDNFSANVVMEGIT 55
MA+ ++ I K V +GD GK+ +++ + ++F I F FS + + T
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDAT 58
Query: 56 VNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVP 114
V +WDTAGQE Y+ L P+ YRGA ++ F + ++AS+E KKW+ ELQ P +
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMV 117
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ L G K DL + + VT+E + +++ G +++E S+KT NVK IF
Sbjct: 118 MALAGNKSDLLDARK----------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 164
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQED 68
K V +GD +VGKT ++ + +KF T Y PT+ D S + +E TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL--QHFAPGVPVVLVGTKLDLRE 126
+ L P R + V ++ + + +R ++ N KWI ++ + V +VLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAIVVYDVSNRQTFLNT-SKWIEDVHRERGQSNVIIVLVGNKTDLVE 129
Query: 127 DKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ V+ +GE+ K+ G +IE S+K N+K +F
Sbjct: 130 KRQ----------VSISEGEDKGKEYGV-MFIETSAKENFNIKALF 164
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVVMEGITVNLGLWDTAGQ 66
K V +GD AVGK+ +L ++ ++F D PT+ +F+ NV + T+ +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHF-APGVPVVLVGTKLDLR 125
E + + YRGA +L + + R +++N+ +KW+ EL+ F +P VVLVG K DL
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNI-EKWLSELRGFSSPETVVVLVGNKSDLG 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAI 176
+ + V E+G+ L++ G Y++E S+ QNV+ F + I
Sbjct: 132 QSRE----------VEEEEGKTLAESEG-LYFLETSALENQNVEEAFLSMI 171
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQED 68
K V +GD +VGKT ++ + +KF T Y T+ D S + +E TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPG-VPVVLVGTKLDLRED 127
+ L P R + V V+ + + +R S+ N KWI E+++ G V +VLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNT-SKWIEEVRNERAGDVIIVLVGNKTDLVEK 129
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ V+ E+G+ ++ G +IE S+K N+K +F
Sbjct: 130 RQ----------VSIEEGDSKGREYGVM-FIETSAKAGFNIKPLF 163
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVVMEGITVNLGLWDTAGQ 66
K V +GD AVGK+ +L ++ ++F D PT+ F+ NV + + +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFA-PGVPVVLVGTKLDLR 125
E + + YRGA +L + + R +++N+ KKW+ EL+ FA P VVLVG K DLR
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRTTFDNI-KKWLFELRDFANPETVVVLVGNKSDLR 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ + V ++G+ L++ G Y++E S+ NV+ F
Sbjct: 132 QSRE----------VEEDEGKTLAESEG-LYFLETSALENVNVEEAF 167
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQED 68
K V +GD VGKT ++ C+ KF T Y T+ D S E T L LWDTAGQE
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
+ L P R + V V+ + + S+ S+ N KWI E++ V +VLVG K DL
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINT-SKWIEEVRAERGSYVIIVLVGNKTDLVNK 127
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ V+ E+GE +++ GA ++E S+K N+K +F
Sbjct: 128 RQ----------VSIEEGENKAREFGA-LFMETSAKAGFNIKPLF 161
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQED 68
K V +GD +VGKT ++ + +KF Y T+ D S + +E TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
+ L P R + V V+ + + SR S+ N KWI E++ V VVLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNT-TKWIDEVRTERGSDVIVVLVGNKTDLVDK 129
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ V+ E+ E ++++ +IE S+K N+K +F
Sbjct: 130 RQ----------VSIEEAEAKARELN-VMFIETSAKAGFNIKALF 163
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 3 STASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLW 61
S A RF K + +GD VGK+C+L+ +T +F + T+ F A + ++ + L +W
Sbjct: 2 SYAYRF-KYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 62 DTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGT 120
DTAGQE + + YRG +L + + R ++ N L W+ E QH + + +L+G
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETF-NHLASWLEEARQHASENMTTMLIGN 119
Query: 121 KLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
K DL EDK V++E+GE+ +++ G ++E S+KT NV+ F
Sbjct: 120 KCDL-EDKR---------TVSTEEGEQFAREHGLI-FMEASAKTAHNVEEAF 160
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K + +GD VGK+C+L+ +T +F + T+ F A ++ ++ + L +WDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQ 65
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + R ++ N L W+ + QH + ++L+G K DL
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ V++E+GE+ +K+ G ++E S+KT QNV+ F
Sbjct: 125 HRR----------AVSTEEGEQFAKEHGLI-FMEASAKTAQNVEEAF 160
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ + ++G V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + RA++ENV +W+ EL+ H P + V+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENV-DRWLKELKNHTDPNIVVMLVGNKSDLR 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
H LA V +E G+ ++Q + ++E S+ NV+ F
Sbjct: 132 ---HLLA-------VPTEDGKSYAEQ-ESLCFMETSALEATNVEDAF 167
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ + F T +I T+ +F V ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + W+ + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDSVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V + +G+ L+ + G ++ E S+KT QNV+ +F
Sbjct: 134 ESKR---------AVPTSKGQALADEYGIKFF-ETSAKTNQNVEQVF 170
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ +EG V +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + A++EN +W+ EL+ H P + V+L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLIYDVTRHATFENA-ARWLRELRGHTDPNIVVMLIGNKCDLR 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
LV V +E+ + +++ + Y++E S+ NV+ F
Sbjct: 132 H----------LVAVKTEEAKAFAER-ESLYFMETSALDATNVENAF 167
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K + +GD VGK+C+L+ ++ + + YI T+ +F V +G T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAP-GVPVVLVGTKLDLR 125
E + + YRGA ++ + + S+ NV K+W+ E+ +A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 126
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDA 174
E++ + E + + +IG ++E S+K NV+ F A
Sbjct: 127 ENR----------AIPYETAKAFADEIGIP-FMETSAKDATNVEQAFMA 164
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 14/174 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLG 59
M++ K + +GD +VGK+C+L+ + + + YI T+ +F + +G T+ L
Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFA-PGVPVVLV 118
+WDTAGQE + + YRGA ++ + S+ NV K+W+ E+ +A V +L+
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNV-KQWLSEIDRYANESVCKLLI 119
Query: 119 GTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
G K D+ E K V++E G L+ ++G ++E S+K NV+ F
Sbjct: 120 GNKNDMVESK----------VVSTETGRALADELGIP-FLETSAKDSINVEQAF 162
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQED 68
K V +GD +VGKT ++ + +KF T Y T+ D S + +E TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
+ L P R + V V+ + + +R S+ N KWI +++ V +VLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNT-SKWIEDVRTERGSDVIIVLVGNKTDLVDK 129
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ V+ E+G+ ++ G +IE S+K N+K +F
Sbjct: 130 RQ----------VSIEEGDNKARDYGVI-FIETSAKAGFNIKPLF 163
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVVMEGITVNLGLWDTAGQED 68
K + +GD VGK+ +L+ + S+ D PT+ +F + + G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQER 73
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVV--LVGTKLDLRE 126
+ L YRGA +L + + R ++ N++ W E++ ++ V LVG K+D
Sbjct: 74 FRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRES 133
Query: 127 DKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
++ V+ E+G L+K++ ++ECS++T+QNV+ F+
Sbjct: 134 ER----------GVSREEGIALAKELNC-MFLECSARTRQNVEQCFE 169
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ + +EG TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + R ++ENVL +W+ EL+ H + +++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENVL-RWLRELRDHADSNIVIMMAGNKSDL- 129
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+H L V E G L+++ G + ++E S+ N++ F
Sbjct: 130 -------NH--LRSVADEDGRSLAEKEGLS-FLETSALEATNIEKAF 166
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLGLWDTAGQ 66
K V +GD AVGK+ +L Y N+F T+ F + N+ +EG V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E + + YRGA ++ + + R+++E+V +W+ EL+ H V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDISRRSTFESV-GRWLDELKTHSDTTVARMLVGNKCDL- 129
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIR 177
+ V+ E+G+ L++ G +++E S+ NVK F+ IR
Sbjct: 130 ---------ESIRAVSVEEGKALAETEG-LFFMETSALDSTNVKTAFEMVIR 171
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGKT +L +T N+F + T+ F+ + +EG TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + R +++NVL +W+ EL+ H + +++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKADL- 129
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAI 176
+H L V E G+ L++ G + ++E S+ NV+ F +
Sbjct: 130 -------NH--LRSVAEEDGQTLAETEGLS-FLETSALEATNVEKAFQTVL 170
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 14/171 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLGLWDTAGQ 66
K V +GD AVGK+ +L Y N+F + T+ F + ++ +EG V +WDTAGQ
Sbjct: 55 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 114
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E + + YRGA ++ + + R ++E+V +W+ EL+ H V +LVG K DL
Sbjct: 115 ERFRAVTSAYYRGAVGALVVYDITRRTTFESV-GRWLDELKIHSDTTVARMLVGNKCDL- 172
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAI 176
+ V+ E+G+ L+++ G +++E S+ NVK F+ I
Sbjct: 173 ---------ENIRAVSVEEGKALAEEEG-LFFVETSALDSTNVKTAFEMVI 213
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K + +GD VGK+C+L+ + + + YI T+ +F V +G T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAP-GVPVVLVGTKLDLR 125
E + + YRGA ++ + + S+ NV K+W+ E+ +A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLT 126
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDA 174
K V++E + + ++G ++E S+K NV+ F A
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMA 164
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
IK + +GD VGK+C+L+ ++ + F T +I T+ +F V ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-QHFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + +S+ N+ + W+ + QH + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDNVNKILVGNKADMD 133
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
E K V + +G+ L+ + G ++ E S+KT NV+ +F
Sbjct: 134 ESKR---------AVPTAKGQALADEYGIKFF-ETSAKTNLNVENVF 170
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K + +GD VGK+C+L+ + + + YI T+ +F V +G T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAP-GVPVVLVGTKLDLR 125
E + + YRGA ++ + + S+ NV K+W+ E+ +A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKNDLT 126
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDA 174
K V++E + + ++G ++E S+K NV+ F A
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMA 164
>AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEG-ITVNLGLWDTAGQ 66
K + +GD VGK+ +L+ +TSN F D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVV--LVGTKLDL 124
E + L YRGA ++ + + R ++ N+ W E+ ++ + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 125 REDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
++ V+ ++G + +++ G ++ECS+KT+ NV+ F+ + ++
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEG-ITVNLGLWDTAGQ 66
K + +GD VGK+ +L+ +TSN F D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVV--LVGTKLDL 124
E + L YRGA ++ + + R ++ N+ W E+ ++ + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 125 REDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
++ V+ ++G + +++ G ++ECS+KT+ NV+ F+ + ++
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEG-ITVNLGLWDTAGQ 66
K + +GD VGK+ +L+ +TSN F D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVV--LVGTKLDL 124
E + L YRGA ++ + + R ++ N+ W E+ ++ + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 125 REDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
++ V+ ++G + +++ G ++ECS+KT+ NV+ F+ + ++
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ + ++ + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + +++ENV + W+ EL+ H P + V+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNKSDLR 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
LV V +E + +++ + Y++E S+ NV+ F
Sbjct: 132 H----------LVAVQTEDAKSFAEK-ESLYFMETSALEATNVENAF 167
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV---FDNFSANVVMEGITVNLGLWDTA 64
K V +GD VGK+ +L +T N+F + T+ F S NV + I + WDTA
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI--WDTA 70
Query: 65 GQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLD 123
GQE Y + YRGA +L + + +++ENV ++W+ EL+ H P + V+LVG K D
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 124 LREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMV 179
LR LV V +E + ++ + Y++E S+ NV+ F + +
Sbjct: 130 LRH----------LVAVQTEDAKSFAEN-ESLYFMETSALESTNVENAFSEVLTQI 174
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ +EG T+ +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + R +++NVL +W+ EL+ H + +++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKSDLN 130
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
L V E G+ L+++ G + ++E S+ NV+ F
Sbjct: 131 H----------LRSVAEEDGQSLAEKEGLS-FLETSALEATNVEKAF 166
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 14/174 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLGLWDTAGQ 66
K V +GD AVGK+ +L Y N+F + T+ F + +++++G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E + + YRGA ++ + + +++ENV +W+ EL H V +L+G K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENV-GRWLDELNTHSDTTVAKMLIGNKCDL- 129
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMV 179
+ V+ E+G+ L++ G +++E S+ NVK F+ IR +
Sbjct: 130 ---------ESIRAVSVEEGKSLAESEGL-FFMETSALDSTNVKTAFEMVIREI 173
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 14/174 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD AVGK+ +L ++ ++F T+ T+ F +V +EG V +WDTAGQ
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E + + YRGA ++ + + ++E+V K+W+ EL H V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNTHCDTAVAQMLVGNKCDLE 130
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMV 179
+ + V+ E+G+ L+++ G +++E S+ NV F+ IR +
Sbjct: 131 D----------IRAVSVEEGKALAEEEG-LFFMETSALDATNVDKAFEIVIREI 173
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLGLWDTAGQED 68
K V +GD AVGKT +L + N+F D T+ F + +V++ TV +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER 76
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
Y + YRGA +L + + R S+++ + KW+ EL+ H + ++L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDH-MAKWLEELRGHADKNIVIMLIGNKCDL--- 132
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
L V +E +E + Q +++E S+ NV+ F
Sbjct: 133 -------GSLRAVPTEDAQEFA-QRENLFFMETSALEATNVETAF 169
>AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=213
Length = 213
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLW------- 61
K V +GD VGKT ++ C+ KF T Y T+ D S E T L LW
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSLG 68
Query: 62 DTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGT 120
DTAGQE + L P R + V V+ + + S+ S+ N KWI E++ V +VLVG
Sbjct: 69 DTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINT-SKWIEEVRAERGSYVIIVLVGN 127
Query: 121 KLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
K DL + V+ E+GE +++ GA ++E S+K N+K +F
Sbjct: 128 KTDLVNKRQ----------VSIEEGENKAREFGA-LFMETSAKAGFNIKPLF 168
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ + +EG TV +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + ++ENV +W+ EL+ H + ++L+G K DL
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENV-SRWLKELRDHADSNIVIMLIGNKTDL- 129
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMV 179
KH L V +E + +++ G + +IE S+ NV+ F + V
Sbjct: 130 --KH-------LRAVATEDAQSYAEKEGLS-FIETSALEALNVEKAFQTILSEV 173
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQED 68
K V +GD VGK+ +L +T N+F + T+ F+ + ++ V +WDTAGQE
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
Y + YRGA +L + + ++ENV ++W+ EL+ H + ++LVG K DLR
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTEANIVIMLVGNKADLRH- 132
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
L V++E + +++ T+++E S+ NV+ F
Sbjct: 133 ---------LRAVSTEDAKAFAEREN-TFFMETSALEALNVENAF 167
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQED 68
K V +GD AVGK+ +L + ++F D T+ F + +E ++ +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
Y + YRGA +L + + R ++E++ +W+ EL+ H + ++L+G K DL +
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHI-PRWLEELRAHADKNIVIILIGNKSDLEDQ 137
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMV 179
+ V +E +E +++ G +++E S+ NV+ F+ + +
Sbjct: 138 R----------AVPTEDAKEFAEKEG-LFFLETSALNATNVENSFNTLMTQI 178
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase
homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203
Length = 203
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 15/178 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLG 59
M++ +K + +GD VGKT ++ Y +NKF Y T+ +F + + ++ V L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAP----GVP 114
+WDTAGQE + L YRGAD VL + + S+E+ L W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFES-LDNWHNEFLTRASPRDPMAFP 119
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+L+G K+D+ D V+ ++ E + G Y E S+K NV F
Sbjct: 120 FILLGNKVDI--------DGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSF 169
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD
LENGTH=206
Length = 206
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLG 59
M S +K + +GD VGKT ++ Y + KF Y T+ +F + V E L
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPG----VP 114
+WDTAGQE + L YRGAD VL + + S S+EN L W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFEN-LNNWREEFLIQASPSDPENFP 119
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
VL+G K+D+ D V+ ++ + G Y E S+K NV+ F
Sbjct: 120 FVLIGNKVDV--------DDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAF 169
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ V ++ + LWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + ++ENV ++W+ EL+ H V ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELRDHTDANVVIMLVGNKADLR 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
H VP +E+ S++ +++E S+ NV+ F
Sbjct: 132 --------HLRAVP--TEEARSFSEREN-MFFMETSALDATNVEQAF 167
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD VGK+ +L +T N+F + T+ F+ + ++ V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + ++ENV ++W+ EL+ H + ++ VG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMFVGNKADLR 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
L V++E + +++ T+++E S+ NV+ F
Sbjct: 132 H----------LRAVSTEDAKAFAEREN-TFFMETSALESMNVENAF 167
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVM-EGITVNLGLWDTAGQ 66
K V GD VGK+ +L +T N F D T+ F+ + + V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + ++ENV ++W+ EL+ H + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
L +++E+ + +++ T+++E S+ NV F
Sbjct: 132 H----------LRAISTEEAKAFAEREN-TFFMETSALEAVNVDNAF 167
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLGLWDTAGQED 68
K V +GD AVGK+ +L Y ++F D T+ F + +V++ +V +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
Y + YRGA +L + + R +++++ +W+ EL+ H + ++L+G K DL +
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHI-PRWLEELRAHADKNIVIILIGNKSDLVDQ 137
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+ + +E +E +++ G +++E S+ NV+ F
Sbjct: 138 R----------AIPTEDAKEFAEKEG-LFFLETSAFNATNVESAF 171
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVVMEGITVNLGLWDTAGQ 66
K V GD VGK+ +L +T N F D T+ F+ ++ ++ V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E Y + YRGA +L + + ++ENV ++W+ EL+ H ++LVG K DL
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNKADLN 131
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
L +++E+ ++ +++ T+++E S+ NV+ F
Sbjct: 132 H----------LRAISTEEVKDFAEREN-TFFMETSALEAINVENAF 167
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLG 59
M S +K + +GD VGKT ++ Y + KF Y T+ +F + V E L
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPG----VP 114
+WDTAGQE + L YRGAD VL + + S S+E+ L W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFED-LNNWREEFLIQASPSDPENFP 119
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
V++G K+D+ D V+ ++ G Y E S+K NV+ F
Sbjct: 120 FVVIGNKIDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLG 59
M S +K + +GD VGKT ++ Y + KF Y T+ +F + V E L
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPG----VP 114
+WDTAGQE + L YRGAD VL + + S S+E+ L W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFED-LNNWREEFLIQASPSDPENFP 119
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
V++G K+D+ D V+ ++ G Y E S+K NV+ F
Sbjct: 120 FVVIGNKIDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLGLWDTAGQED 68
K V +GD AVGKT +L +T N+F D T+ F + + + G V +WDTAGQE
Sbjct: 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDL 124
Y + YRGA ++ + + R S+++V +W+ EL+ H ++LVG K DL
Sbjct: 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHV-ARWVEELRAHADDSAVIMLVGNKADL 145
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQED 68
K V +GD AVGK+ +L ++ N+F + T+ F + ++ T+ +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQER 76
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLRED 127
Y + YRGA +L + + R S+++V +W+ EL+ H + ++L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVA-RWLEELRGHADKNIVIMLIGNKTDL--- 132
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
L V +E +E + Q +++E S+ NV+ F
Sbjct: 133 -------GTLRAVPTEDAKEFA-QRENLFFMETSALDSNNVEPSF 169
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase
homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206
Length = 206
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLG 59
MAS +K + +GD VGKT ++ + + KF Y T+ +F + V ++ L
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPG----VP 114
+WDTAGQE + L YRGAD VL + S+EN L W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFEN-LNNWREEFLIQASPSDPENFP 119
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
V++G K D+ K + VT ++ + G Y E S+K NV F+
Sbjct: 120 FVVLGNKTDVDGGKSRV--------VTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFE 170
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-MEGITVNLGLWDTAGQ 66
K V +GD AVGK+ +L + ++F + T+ F + + G + +WDTAGQ
Sbjct: 14 LFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQ 73
Query: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQ-HFAPGVPVVLVGTKLDLR 125
E + + YRGA +L + + R ++ ++ +W+ EL H V +LVG K DL+
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFHSI-GRWLNELHTHSDMNVVTILVGNKSDLK 132
Query: 126 EDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMV 179
+ L V++ +G+ L++ G +++E S+ NV F+ ++ +
Sbjct: 133 D----------LREVSTAEGKALAEAQG-LFFMETSALDSSNVAAAFETVVKEI 175
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVVMEGITVNLGLWDTAGQED 68
K + +GD VGK+ +L+ + S+ D PT+ +F + + G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVV--LVGTKLDLRE 126
+ L +RG+ +L + + R ++ N+ W E++ ++ + LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 127 DKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
++ V+ E+G L+K + ++ ECS++T++NV G F+
Sbjct: 134 ER----------KVSREEGMALAKDLNCLFH-ECSARTRENVNGCFE 169
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVVMEGITVNLGLWDTAGQED 68
K + +GD VGK+ +L+ + S+ D PT+ +F + + G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVV--LVGTKLDLRE 126
+ L +RG+ +L + + R ++ N+ W E++ ++ + LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 127 DKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
++ V+ E+G L+K + ++ ECS++T++NV G F+
Sbjct: 134 ER----------KVSREEGMALAKDLNCLFH-ECSARTRENVNGCFE 169
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVVMEGITVNLGLWDTAGQED 68
K + +GD VGK+ +L+ + S+ D PT+ +F + + G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 69 YNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVV--LVGTKLDLRE 126
+ L +RG+ +L + + R ++ N+ W E++ ++ + LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 127 DKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
++ V+ E+G L+K + ++ ECS++T++NV G F+
Sbjct: 134 ER----------KVSREEGMALAKDLNCLFH-ECSARTRENVNGCFE 169
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=212
Length = 212
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 1 MASTASR-FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNL 58
M S +R +K + +GD VGKT ++ Y KF Y T+ +F + + ++ +V L
Sbjct: 1 MDSLKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTL 60
Query: 59 GLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAP----GV 113
+WDTAGQE + L YRGAD VL + + + S+E L W E L+ P
Sbjct: 61 QIWDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFE-TLNNWHTEFLKQANPMEPETF 119
Query: 114 PVVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
P VL+G K D+ D V++++ E G Y E S+K N+ F
Sbjct: 120 PFVLIGNKTDV--------DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAF 170
>AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=206
Length = 206
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGIT-VNLG 59
MA+ +K + +GD VGKT ++ Y KF Y T+ +F + G V L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPG----VP 114
+WDTAGQE + L YRGAD L + + S++N L+ W E L+ +P P
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQASPSDPKTFP 119
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
+++G K+D+ D V+ ++ + G Y E S+K NV F
Sbjct: 120 FIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAF 169
>AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D |
chr1:19468150-19469449 REVERSE LENGTH=206
Length = 206
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVMEGITVNLG 59
M+S +K + +GD VGKT ++ + + KF Y T+ +F + V ++ L
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPG----VP 114
+WDTAGQE + L YRGAD VL + + S++N L W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDN-LNNWREEFLIQASPSDPENFP 119
Query: 115 VVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFD 173
V++G K D+ K + V+ ++ + G Y E S+K NV F+
Sbjct: 120 FVVLGNKTDVDGGKSRV--------VSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFE 170
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 49 VVMEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-Q 107
V ++G + L +WDTAGQE + + YRGA +L + + R ++ N L W+ + Q
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLASWLEDARQ 60
Query: 108 HFAPGVPVVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQN 167
H P + ++L+G K DL + V+ E+G++ +K+ G ++E S++T QN
Sbjct: 61 HANPNMSIMLIGNKCDLAHKR----------AVSKEEGQQFAKEHG-LLFLEASARTAQN 109
Query: 168 VKGIF 172
V+ F
Sbjct: 110 VEEAF 114
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 49 VVMEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPEL-Q 107
V ++G + L +WDTAGQE + + YRGA +L + + +S+ N+ + W+ + Q
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 108 HFAPGVPVVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQN 167
H + V +LVG K D+ E K V + +G+ L+ + G ++ E S+KT N
Sbjct: 106 HASDNVNKILVGNKADMDESKR---------AVPTAKGQALADEYGIKFF-ETSAKTNLN 155
Query: 168 VKGIF 172
V+ +F
Sbjct: 156 VENVF 160
>AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=211
Length = 211
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGIT-VNLG 59
MA+ +K + +GD VGKT ++ Y KF Y T+ +F + G V L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGV------ 113
+WDTAGQE + L YRGAD L + + S++N L+ W E A +
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQAWNIGMCPSD 119
Query: 114 ----PVVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVK 169
P +++G K+D+ D V+ ++ + G Y E S+K NV
Sbjct: 120 PKTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVD 171
Query: 170 GIF 172
F
Sbjct: 172 EAF 174
>AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 5 ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDTA 64
+ + ++ V VGD GK+ +++ ++ FP + +P V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 65 GQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDL 124
+ + + + AD VL ++ + E + + W+PEL+ +P+++ G KLD
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDF 132
Query: 125 REDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
R+D + ++ + P+ +Q E+ IECS+ Q + +F A + V+
Sbjct: 133 RDDNNQVSLEQVMSPIM-QQFREIET------CIECSALKQLQAQEVFYYAQKTVL 181
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 5 ASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDTA 64
+ + ++ V VGD GK+ +++ ++ FP + +P V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 65 GQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDL 124
+ + + + AD VL ++ + E + + W+PEL+ +P+++ G KLD
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDF 132
Query: 125 REDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
R+D + ++ + P+ +Q E+ IECS+ Q + +F A + V+
Sbjct: 133 RDDNNQVSLEQVMSPIM-QQFREIET------CIECSALKQLQAQEVFYYAQKTVL 181
>AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=217
Length = 217
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 1 MASTASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGIT-VNLG 59
MA+ +K + +GD VGKT ++ Y KF Y T+ +F + G V L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGV------ 113
+WDTAGQE + L YRGAD L + + S++N L+ W E A +
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQAWNIGMWTIA 119
Query: 114 ----------PVVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSK 163
P +++G K+D+ D V+ ++ + G Y E S+K
Sbjct: 120 EASPSDPKTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAK 171
Query: 164 TQQNVKGIF 172
NV F
Sbjct: 172 DDFNVDEAF 180
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4
| chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQE 67
K + VGDG GKT L + + +F + PT+ D + + + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 68 DYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDL 124
Y+ L+ Y ++ F + +R +Y N+ +W +L+ +P+VL G K+D+
Sbjct: 74 KYSGLKDAYYIHGQCAIIMFDVTARHTYMNI-DRWYRDLRRVCKNIPIVLCGNKVDV 129
>AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 |
chr5:15864166-15865782 REVERSE LENGTH=204
Length = 204
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVF-DNFSANVVMEGITVNLGLWDTAGQE 67
+K + +GD VGKT +L Y F + T++ D + + + V L +WDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 68 DYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPGVPV----VLVGTKL 122
+ L YR D VL + + + ++E++ W E ++ P P VL+G K
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESI-DNWHDEFIKQANPETPTKFPFVLMGNKT 124
Query: 123 DLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
D+ K + V E ++ G Y E S+K + NV+ F
Sbjct: 125 DVNNGKPRV--------VAKEIADQWCGSKGNIVYFETSAKAKINVEEAF 166
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQE 67
K V VGDG GKT + + + +F Y PT+ + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 68 DYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLR 125
+ LR Y ++ F + +R +Y+NV W +L +P+VL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQE 67
K V VGDG GKT + + + +F Y PT+ + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 68 DYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLR 125
+ LR Y ++ F + +R +Y+NV W +L +P+VL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTV-FDNFSANVVMEGITVNLGLWDTAGQE 67
K V VGDG GKT + + + +F Y PT+ + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 68 DYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLR 125
+ LR Y ++ F + +R +Y+NV W +L +P+VL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 |
chr3:23329200-23332692 REVERSE LENGTH=643
Length = 643
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDTAGQED 68
++ GD GK+ ++ S FP D +P V + + + + DT D
Sbjct: 15 LRVAVAGDKGTGKSSLISAVASETFP-DNVPRVLPPITLPADAFPDYIPITIVDTPSSID 73
Query: 69 YNRLRPLS-YRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLRED 127
NR++ + +R ADV +L ++ ++ + + W+PEL+ PV++VG KLDLR++
Sbjct: 74 -NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDE 132
Query: 128 KHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIRMVI 180
+ + P+ E E IECS+ T V +F A + V+
Sbjct: 133 RSPARLEDIMSPIMKEYRE-------IETCIECSALTLIQVPDVFYFASKAVL 178
>AT5G37680.1 | Symbols: ATARLA1A, ARLA1A | ADP-ribosylation
factor-like A1A | chr5:14969797-14971098 REVERSE
LENGTH=184
Length = 184
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 28/173 (16%)
Query: 14 VGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDTAGQEDYNRLR 73
VG GKT ++ + + D IPTV F+ V +G V + +WD GQ + +
Sbjct: 25 VGLQNAGKTSLVNAIATGGYSEDMIPTV--GFNMRKVTKG-NVTIKIWDLGGQRRFRTMW 81
Query: 74 PLSYRGADVFVLAFSL-------VSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLRE 126
RG V +SR+ ++L K P L G+P++++G K+D E
Sbjct: 82 ERYCRGVSAIVYVIDAADRDSVPISRSELNDLLTK--PSLN----GIPLLILGNKIDKSE 135
Query: 127 --DKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIFDAAIR 177
K L D GL VT + Y I C K N+ + D I+
Sbjct: 136 ALSKQALVDQLGLESVTDRE--------VCCYMISC--KDSINIDAVIDWLIK 178
>AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133405-6134959 FORWARD LENGTH=172
Length = 172
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 56 VNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPE-LQHFAPG-- 112
V L +WDTAGQE + L YRGAD L + + S++N L+ W E L+ +P
Sbjct: 23 VTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDN-LETWHEEFLKQASPSDP 81
Query: 113 --VPVVLVGTKLDLREDKHYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKG 170
P +++G K+D+ D V+ ++ + G Y E S+K NV
Sbjct: 82 KTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDE 133
Query: 171 IF 172
F
Sbjct: 134 AF 135
>AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-binding
family protein | chr5:22276611-22278328 REVERSE
LENGTH=288
Length = 288
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVMEGITVNLGLWDTAGQEDY 69
K +GD GKT ++ Y ++ + T + ++G+T++ +WD G E
Sbjct: 103 KISLLGDCQTGKTTFVVKYVGDENQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEKR 162
Query: 70 NRLR-PLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGVPVVLVGTKLDLREDK 128
++ P++ + A + F L SR++ +V W + + + +L+GTK D
Sbjct: 163 SKDHIPIACKDAVAILFMFDLTSRSTLNSVF-GWYSQARKWNKTAIPILIGTKFD----- 216
Query: 129 HYLADHPGLVPVTSEQGEELSKQIGATYYIECSSKTQQNVKGIF 172
++ P L Q +K + A+ + S+ NV IF
Sbjct: 217 DFVRLPPNLQWTIVTQARAYAKVMNASLFFS-SATHNINVNKIF 259