Miyakogusa Predicted Gene

Lj1g3v0411300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0411300.1 Non Chatacterized Hit- tr|K3XHG0|K3XHG0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001331,43.9,8e-19,seg,NULL; DUF588,Uncharacterised protein family
UPF0497, trans-membrane plant,CUFF.25678.1
         (281 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36330.1 | Symbols:  | Uncharacterised protein family (UPF049...   197   5e-51
AT5G62820.1 | Symbols:  | Uncharacterised protein family (UPF049...   174   6e-44
AT5G40300.1 | Symbols:  | Uncharacterised protein family (UPF049...   142   2e-34

>AT2G36330.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15233620-15235298 FORWARD LENGTH=283
          Length = 283

 Score =  197 bits (502), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 104/225 (46%), Positives = 128/225 (56%), Gaps = 17/225 (7%)

Query: 67  PVKKSAPGPGKASERQKPPENAASAAVTVFNPTTTREE--PQRPATKVGERRSRSAPAGW 124
           P  +    PGK  E   P        V V N   + +E  P R + +VG  RS    +G 
Sbjct: 66  PESRRNKNPGKVEETPSP-------IVVVHNHNRSVKEVVPTRKSARVGSGRSSGQRSGA 118

Query: 125 --------KAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLC 176
                   + EEVV+  ALGFRLSEV + LISFS+MAAD+T+GWSGDS+DRYKEYR+CL 
Sbjct: 119 VSAILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLS 178

Query: 177 MNVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDD 236
           +NV+ F +S  Q CDLA  LV  KH+ISHHLR  F+F +DQV             TRVDD
Sbjct: 179 VNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTRVDD 238

Query: 237 WQSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRSSM 281
           W SNWGKDEFTEMA+ S+               ISGY L  + S+
Sbjct: 239 WVSNWGKDEFTEMASASIAMSFLAFLAFAFSSLISGYNLFNQGSL 283


>AT5G62820.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:25223828-25224898 REVERSE LENGTH=297
          Length = 297

 Score =  174 bits (441), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 155/298 (52%), Gaps = 33/298 (11%)

Query: 12  MKKSLSRGSESSTQFESPH---HFSSPTLWVPESTESPE--YRSPQNSPGVWVDNSLAVV 66
           MK++ S  SE+ +  ESPH    F SP   + ++ + PE  Y SP+ SP   ++N  ++V
Sbjct: 3   MKRTASSNSEAQSYNESPHSPLRFHSP---LSDAGDLPESRYVSPEGSP-FKIENPKSIV 58

Query: 67  PVKK------------SAPGPGKASERQKP---PENAASAAVT---VFNPTTTREEPQRP 108
              K              P       RQ+    P N++S       V + +  RE+  + 
Sbjct: 59  AGNKLTQFSPLPSPIPPPPPQFPPPRRQRNARVPMNSSSDKSPSSMVVHNSWVREDGGQT 118

Query: 109 ATKV------GERRSRSAPAGWKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSG 162
            T+       GE  +R+     + +++V   ALGFR++EV +C+ISFS+MAAD+TQGWSG
Sbjct: 119 TTRKAGAPINGEESTRTTVNRARGDDLVSLTALGFRITEVILCVISFSIMAADKTQGWSG 178

Query: 163 DSYDRYKEYRYCLCMNVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXX 222
           DSYDRYKEYRYCL +NVI F +S  + CD AC +    ++I+      F F MDQ+    
Sbjct: 179 DSYDRYKEYRYCLAVNVIAFVYSAFEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYL 238

Query: 223 XXXXXXXXXTRVDDWQSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRSS 280
                    TRVDDW SNWGKDEFT+MAT S+               IS Y L T +S
Sbjct: 239 LMSASSCAATRVDDWVSNWGKDEFTQMATASIAVSFLAFGAFAVSALISSYRLFTHAS 296


>AT5G40300.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:16110778-16112701 FORWARD LENGTH=270
          Length = 270

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 106/224 (47%), Gaps = 14/224 (6%)

Query: 67  PVKKSAPGPGKASERQKPPENAASAAVTVFNPTTTREEPQRPATKVGERRSRSAPAGW-- 124
           P   S P    +S     P  + +   T F  T   EE      KV E R +  P+    
Sbjct: 52  PTLSSIPDSHGSSPHTIIPTPSVAKTETPFRVTNGEEE-----KKVSESRRQLRPSFSSS 106

Query: 125 -------KAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCM 177
                  K   ++RK  LGFR+     CL+SFSVM +DR +GW+ DS+  YKE+R+CL  
Sbjct: 107 SSTPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRFCLAA 166

Query: 178 NVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDW 237
           NVIGF +SG  +CDL   L T      H+LR+  +F +DQ+              RVDDW
Sbjct: 167 NVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASASTSASIRVDDW 226

Query: 238 QSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRSSM 281
           QSNWG D+F ++A  SV                SGY LC   S+
Sbjct: 227 QSNWGADKFPDLARASVALSYVSFVAFAFCSLASGYALCALRSI 270