Miyakogusa Predicted Gene
- Lj1g3v0411300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0411300.1 Non Chatacterized Hit- tr|K3XHG0|K3XHG0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001331,43.9,8e-19,seg,NULL; DUF588,Uncharacterised protein family
UPF0497, trans-membrane plant,CUFF.25678.1
(281 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36330.1 | Symbols: | Uncharacterised protein family (UPF049... 197 5e-51
AT5G62820.1 | Symbols: | Uncharacterised protein family (UPF049... 174 6e-44
AT5G40300.1 | Symbols: | Uncharacterised protein family (UPF049... 142 2e-34
>AT2G36330.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr2:15233620-15235298 FORWARD LENGTH=283
Length = 283
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 128/225 (56%), Gaps = 17/225 (7%)
Query: 67 PVKKSAPGPGKASERQKPPENAASAAVTVFNPTTTREE--PQRPATKVGERRSRSAPAGW 124
P + PGK E P V V N + +E P R + +VG RS +G
Sbjct: 66 PESRRNKNPGKVEETPSP-------IVVVHNHNRSVKEVVPTRKSARVGSGRSSGQRSGA 118
Query: 125 --------KAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLC 176
+ EEVV+ ALGFRLSEV + LISFS+MAAD+T+GWSGDS+DRYKEYR+CL
Sbjct: 119 VSAILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLS 178
Query: 177 MNVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDD 236
+NV+ F +S Q CDLA LV KH+ISHHLR F+F +DQV TRVDD
Sbjct: 179 VNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTRVDD 238
Query: 237 WQSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRSSM 281
W SNWGKDEFTEMA+ S+ ISGY L + S+
Sbjct: 239 WVSNWGKDEFTEMASASIAMSFLAFLAFAFSSLISGYNLFNQGSL 283
>AT5G62820.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr5:25223828-25224898 REVERSE LENGTH=297
Length = 297
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 155/298 (52%), Gaps = 33/298 (11%)
Query: 12 MKKSLSRGSESSTQFESPH---HFSSPTLWVPESTESPE--YRSPQNSPGVWVDNSLAVV 66
MK++ S SE+ + ESPH F SP + ++ + PE Y SP+ SP ++N ++V
Sbjct: 3 MKRTASSNSEAQSYNESPHSPLRFHSP---LSDAGDLPESRYVSPEGSP-FKIENPKSIV 58
Query: 67 PVKK------------SAPGPGKASERQKP---PENAASAAVT---VFNPTTTREEPQRP 108
K P RQ+ P N++S V + + RE+ +
Sbjct: 59 AGNKLTQFSPLPSPIPPPPPQFPPPRRQRNARVPMNSSSDKSPSSMVVHNSWVREDGGQT 118
Query: 109 ATKV------GERRSRSAPAGWKAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSG 162
T+ GE +R+ + +++V ALGFR++EV +C+ISFS+MAAD+TQGWSG
Sbjct: 119 TTRKAGAPINGEESTRTTVNRARGDDLVSLTALGFRITEVILCVISFSIMAADKTQGWSG 178
Query: 163 DSYDRYKEYRYCLCMNVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXX 222
DSYDRYKEYRYCL +NVI F +S + CD AC + ++I+ F F MDQ+
Sbjct: 179 DSYDRYKEYRYCLAVNVIAFVYSAFEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYL 238
Query: 223 XXXXXXXXXTRVDDWQSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRSS 280
TRVDDW SNWGKDEFT+MAT S+ IS Y L T +S
Sbjct: 239 LMSASSCAATRVDDWVSNWGKDEFTQMATASIAVSFLAFGAFAVSALISSYRLFTHAS 296
>AT5G40300.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr5:16110778-16112701 FORWARD LENGTH=270
Length = 270
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 67 PVKKSAPGPGKASERQKPPENAASAAVTVFNPTTTREEPQRPATKVGERRSRSAPAGW-- 124
P S P +S P + + T F T EE KV E R + P+
Sbjct: 52 PTLSSIPDSHGSSPHTIIPTPSVAKTETPFRVTNGEEE-----KKVSESRRQLRPSFSSS 106
Query: 125 -------KAEEVVRKVALGFRLSEVAVCLISFSVMAADRTQGWSGDSYDRYKEYRYCLCM 177
K ++RK LGFR+ CL+SFSVM +DR +GW+ DS+ YKE+R+CL
Sbjct: 107 SSTPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRFCLAA 166
Query: 178 NVIGFAHSGLQVCDLACQLVTGKHIISHHLRYHFDFFMDQVXXXXXXXXXXXXXTRVDDW 237
NVIGF +SG +CDL L T H+LR+ +F +DQ+ RVDDW
Sbjct: 167 NVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASASTSASIRVDDW 226
Query: 238 QSNWGKDEFTEMATVSVGXXXXXXXXXXXXXXISGYILCTRSSM 281
QSNWG D+F ++A SV SGY LC S+
Sbjct: 227 QSNWGADKFPDLARASVALSYVSFVAFAFCSLASGYALCALRSI 270