Miyakogusa Predicted Gene

Lj1g3v0410150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0410150.1 Non Chatacterized Hit- tr|A5BMW2|A5BMW2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.49,2e-18,TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain;
TPR_1,Tetratric,NODE_32486_length_1436_cov_124.977020.path2.1
         (491 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   362   e-100
AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   358   7e-99
AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   331   8e-91
AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   330   1e-90
AT2G31240.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    78   2e-14

>AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9551629-9553654 REVERSE
           LENGTH=650
          Length = 650

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/293 (61%), Positives = 227/293 (77%), Gaps = 8/293 (2%)

Query: 207 SGVKSLKSSPLG------KSVSLNRVEN-SAESALDKPERAPILLKQARDLISSGDNPQK 259
           +G K++  S +G      K V   +++N + E + +  E A  LL QAR+L+SSGD+  K
Sbjct: 107 TGKKNVTKSNVGVGGMRKKKVGGTKLQNGNEEPSSENVELARFLLNQARNLVSSGDSTHK 166

Query: 260 ALELALQAMNLLEKLG-NGKPSLELVMCLHVTAAIYCNLGQYNEAIPILERSIEIPVIGE 318
           ALEL  +A  L E    NGKP LE +MCLHVTAA++C L +YNEAIP+L+RS+EIPV+ E
Sbjct: 167 ALELTHRAAKLFEASAENGKPCLEWIMCLHVTAAVHCKLKEYNEAIPVLQRSVEIPVVEE 226

Query: 319 SQQHALAKFAGHMQLGDTYAMLGQLENSIMCYSSGFEVQRQVLGETDPRVGETCRYVAEA 378
            ++HALAKFAG MQLGDTYAM+GQLE+SI CY+ G  +Q++VLGE DPRVGETCRY+AEA
Sbjct: 227 GEEHALAKFAGLMQLGDTYAMVGQLESSISCYTEGLNIQKKVLGENDPRVGETCRYLAEA 286

Query: 379 NVQALQFDEAERLCQMALDIHKANSSAPSLEEAADRRLMGLILDTKGNHEAALEHLVLAS 438
            VQAL+FDEA+++C+ AL IH+ +    S+ EAADRRLMGLI +TKG+HE ALEHLVLAS
Sbjct: 287 LVQALRFDEAQQVCETALSIHRESGLPGSIAEAADRRLMGLICETKGDHENALEHLVLAS 346

Query: 439 MAMVANGQEVEVASVDCSIGDTYLSMSRYDEAVFAYEKALTVFKTGKGENHPA 491
           MAM ANGQE EVA VD SIGD+YLS+SR+DEA+ AY+K+LT  KT KGENHPA
Sbjct: 347 MAMAANGQESEVAFVDTSIGDSYLSLSRFDEAICAYQKSLTALKTAKGENHPA 399



 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 40/46 (86%)

Query: 53 DGVIEPSIEQLYENVCDMQSSDQSPSRKSFGSDGDESRIDSELRQL 98
          D + + +IE+L +N+C++QSS+QSPSR+SFGS GDES+IDS+L+ L
Sbjct: 14 DQMFDTTIEELCKNLCELQSSNQSPSRQSFGSYGDESKIDSDLQHL 59



 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 5/157 (3%)

Query: 333 LGDTYAMLGQLENSIMCYSSGFEVQRQVLGETDPRVGETCRYVAEANVQALQFDEAERLC 392
           +GD+Y  L + + +I  Y       +   GE  P VG     +A+   +  +  EA+  C
Sbjct: 365 IGDSYLSLSRFDEAICAYQKSLTALKTAKGENHPAVGSVYIRLADLYNRTGKVREAKSYC 424

Query: 393 QMALDIHKANSSAPSLEEAADRRL-MGLILDTKGNHEAALEHLVLASMAMVAN--GQEVE 449
           + AL I+++++   S EE A     + +I ++    E A+  L+  ++ + A+  GQ++ 
Sbjct: 425 ENALRIYESHNLEISPEEIASGLTDISVICESMNEVEQAIT-LLQKALKIYADSPGQKIM 483

Query: 450 VASVDCSIGDTYLSMSRYDEAVFAYEKALTVFK-TGK 485
           +A ++  +G  Y  M +Y E+   ++ A++  + TGK
Sbjct: 484 IAGIEAQMGVLYYMMGKYMESYNTFKSAISKLRATGK 520


>AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:10380513-10382593 REVERSE
           LENGTH=663
          Length = 663

 Score =  358 bits (918), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 178/300 (59%), Positives = 228/300 (76%), Gaps = 11/300 (3%)

Query: 201 QTKGVASGVKSLKSSPLGKSVSLNRVENSAESALDK-------PERAPILLKQARDLISS 253
           Q K +++G K  K+SP    +  +R+ +     L K       PE   +LLKQAR+L+SS
Sbjct: 108 QKKPLSNGKKVAKTSPNNPKMPGSRISSRKSPDLGKVSVDEESPELGVVLLKQARELVSS 167

Query: 254 GDNPQKALELALQAMNLLEKLGNGKP--SLELVMCLHVTAAIYCNLGQYNEAIPILERSI 311
           G+N  KAL+LAL+A+ + EK G G+    L LVM LH+ AAIY  LG+YN+A+P+LERSI
Sbjct: 168 GENLNKALDLALRAVKVFEKCGEGEKQLGLNLVMSLHILAAIYAGLGRYNDAVPVLERSI 227

Query: 312 EIPVIGESQQHALAKFAGHMQLGDTYAMLGQLENSIMCYSSGFEVQRQVLGETDPRVGET 371
           EIP+I + + HALAKFAG MQLGD Y ++GQ+ENSIM Y++G E+QRQVLGE+D RVGET
Sbjct: 228 EIPMIEDGEDHALAKFAGCMQLGDMYGLMGQVENSIMLYTAGLEIQRQVLGESDARVGET 287

Query: 372 CRYVAEANVQALQFDEAERLCQMALDIHKANSSA--PSLEEAADRRLMGLILDTKGNHEA 429
           CRY+AEA+VQA+QF+EA RLCQMALDIHK N +A   S+EEAADR+LMGLI D KG++E 
Sbjct: 288 CRYLAEAHVQAMQFEEASRLCQMALDIHKENGAAATASIEEAADRKLMGLICDAKGDYEV 347

Query: 430 ALEHLVLASMAMVANGQEVEVASVDCSIGDTYLSMSRYDEAVFAYEKALTVFKTGKGENH 489
           ALEH VLASMAM +     +VA+VDCSIGD Y+S++R+DEA+FAY+KAL VFK GKGE H
Sbjct: 348 ALEHYVLASMAMSSQNHREDVAAVDCSIGDAYMSLARFDEAIFAYQKALAVFKQGKGETH 407



 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 44/68 (64%), Gaps = 8/68 (11%)

Query: 33 SPRGSLSPQRGQNGGPNFPVDGVIEPSIEQLYENVCDMQSSD-QSPSRKSFGSDGDESRI 91
          SPR  LS         +  +DG +  SIEQLY NVC+M+SSD QSPSR SF S G ESRI
Sbjct: 19 SPRSPLSS-------IDLAIDGAMNASIEQLYHNVCEMESSDDQSPSRASFISYGAESRI 71

Query: 92 DSELRQLV 99
          D ELR LV
Sbjct: 72 DLELRHLV 79


>AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6659033 FORWARD
           LENGTH=609
          Length = 609

 Score =  331 bits (848), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 156/271 (57%), Positives = 204/271 (75%), Gaps = 11/271 (4%)

Query: 231 ESALDKPERAPILLKQARDLISSGDNPQKALELALQAMNLLEKL-----------GNGKP 279
           + +LD P+  P LLK ARD I+SG+ P KAL+ A++A    E+             +G P
Sbjct: 76  DPSLDNPDLGPFLLKLARDAIASGEGPNKALDYAIRATKSFERCCAAVAPPIPGGSDGGP 135

Query: 280 SLELVMCLHVTAAIYCNLGQYNEAIPILERSIEIPVIGESQQHALAKFAGHMQLGDTYAM 339
            L+L M LHV AAIYC+LG+++EA+P LER+I++P       H+LA F+GHMQLGDT +M
Sbjct: 136 VLDLAMSLHVLAAIYCSLGRFDEAVPPLERAIQVPDPTRGPDHSLAAFSGHMQLGDTLSM 195

Query: 340 LGQLENSIMCYSSGFEVQRQVLGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIH 399
           LGQ++ SI CY  G ++Q Q LG+TDPRVGETCRY+AEA VQA+QF++AE LC+  L+IH
Sbjct: 196 LGQIDRSIACYEEGLKIQIQTLGDTDPRVGETCRYLAEAYVQAMQFNKAEELCKKTLEIH 255

Query: 400 KANSSAPSLEEAADRRLMGLILDTKGNHEAALEHLVLASMAMVANGQEVEVASVDCSIGD 459
           +A+S   SLEEAADRRLM +I + KG++E ALEHLVLASMAM+A+GQE EVAS+D SIG+
Sbjct: 256 RAHSEPASLEEAADRRLMAIICEAKGDYENALEHLVLASMAMIASGQESEVASIDVSIGN 315

Query: 460 TYLSMSRYDEAVFAYEKALTVFKTGKGENHP 490
            Y+S+ R+DEAVF+Y+KALTVFK  KGE HP
Sbjct: 316 IYMSLCRFDEAVFSYQKALTVFKASKGETHP 346



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 8/197 (4%)

Query: 292 AIYCNL-GQYNEAIPILERSIEIPVIGESQQHALAKFAGHMQLGDTYAMLGQLENSIMCY 350
           AI C   G Y  A+  L  +  + +I   Q+  +A     + +G+ Y  L + + ++  Y
Sbjct: 274 AIICEAKGDYENALEHLVLA-SMAMIASGQESEVASI--DVSIGNIYMSLCRFDEAVFSY 330

Query: 351 SSGFEVQRQVLGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHKANSSAPSLEE 410
                V +   GET P V      +AE   +  +  E++  C+ AL I+       ++EE
Sbjct: 331 QKALTVFKASKGETHPTVASVFVRLAELYHRTGKLRESKSYCENALRIYNKPVPGTTVEE 390

Query: 411 -AADRRLMGLILDTKGNHEAALEHLVLASMAMVAN--GQEVEVASVDCSIGDTYLSMSRY 467
            A     +  I ++    E AL+ L+  SM ++ +  GQ+  +A ++  +G  Y ++ RY
Sbjct: 391 IAGGLTEISAIYESVDEPEEALK-LLQKSMKLLEDKPGQQSAIAGLEARMGVMYYTVGRY 449

Query: 468 DEAVFAYEKALTVFKTG 484
           ++A  A+E A+T  +  
Sbjct: 450 EDARNAFESAVTKLRAA 466


>AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6658702 FORWARD
           LENGTH=531
          Length = 531

 Score =  330 bits (847), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 162/289 (56%), Positives = 211/289 (73%), Gaps = 12/289 (4%)

Query: 213 KSSPLGKSVSLNRVENSAESALDKPERAPILLKQARDLISSGDNPQKALELALQAMNLLE 272
           K SP   S S   V +  + +LD P+  P LLK ARD I+SG+ P KAL+ A++A    E
Sbjct: 59  KDSPTVSS-STAAVIDVDDPSLDNPDLGPFLLKLARDAIASGEGPNKALDYAIRATKSFE 117

Query: 273 KL-----------GNGKPSLELVMCLHVTAAIYCNLGQYNEAIPILERSIEIPVIGESQQ 321
           +             +G P L+L M LHV AAIYC+LG+++EA+P LER+I++P       
Sbjct: 118 RCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIYCSLGRFDEAVPPLERAIQVPDPTRGPD 177

Query: 322 HALAKFAGHMQLGDTYAMLGQLENSIMCYSSGFEVQRQVLGETDPRVGETCRYVAEANVQ 381
           H+LA F+GHMQLGDT +MLGQ++ SI CY  G ++Q Q LG+TDPRVGETCRY+AEA VQ
Sbjct: 178 HSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKIQIQTLGDTDPRVGETCRYLAEAYVQ 237

Query: 382 ALQFDEAERLCQMALDIHKANSSAPSLEEAADRRLMGLILDTKGNHEAALEHLVLASMAM 441
           A+QF++AE LC+  L+IH+A+S   SLEEAADRRLM +I + KG++E ALEHLVLASMAM
Sbjct: 238 AMQFNKAEELCKKTLEIHRAHSEPASLEEAADRRLMAIICEAKGDYENALEHLVLASMAM 297

Query: 442 VANGQEVEVASVDCSIGDTYLSMSRYDEAVFAYEKALTVFKTGKGENHP 490
           +A+GQE EVAS+D SIG+ Y+S+ R+DEAVF+Y+KALTVFK  KGE HP
Sbjct: 298 IASGQESEVASIDVSIGNIYMSLCRFDEAVFSYQKALTVFKASKGETHP 346



 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)

Query: 292 AIYCNL-GQYNEAIPILERSIEIPVIGESQQHALAKFAGHMQLGDTYAMLGQLENSIMCY 350
           AI C   G Y  A+  L  +  + +I   Q+  +A     + +G+ Y  L + + ++  Y
Sbjct: 274 AIICEAKGDYENALEHLVLA-SMAMIASGQESEVASI--DVSIGNIYMSLCRFDEAVFSY 330

Query: 351 SSGFEVQRQVLGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHKANSSAPSLEE 410
                V +   GET P V      +AE   +  +  E++  C+ AL I+       ++EE
Sbjct: 331 QKALTVFKASKGETHPTVASVFVRLAELYHRTGKLRESKSYCENALRIYNKPVPGTTVEE 390

Query: 411 -AADRRLMGLILDTKGNHEAALEHLVLASMAMVAN--GQEVEVASVDCSIGDTYLSMSRY 467
            A     +  I ++    E AL+ L+  SM ++ +  GQ+  +A ++  +G  Y ++ RY
Sbjct: 391 IAGGLTEISAIYESVDEPEEALK-LLQKSMKLLEDKPGQQSAIAGLEARMGVMYYTVGRY 449

Query: 468 DEAVFAYEKALTVFK 482
           ++A  A+E A+T  +
Sbjct: 450 EDARNAFESAVTKLR 464


>AT2G31240.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:13317570-13319518 REVERSE
           LENGTH=617
          Length = 617

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 7/234 (2%)

Query: 244 LKQARDLISSGDNPQKALELALQAMNLLEKLGNGKPSLELVMCLHVTAAIYCNLGQYNEA 303
           LK    L   G++P+K L  A +A+   +  GN KP+L + M   +  +    L +++++
Sbjct: 122 LKLGLHLDREGEDPEKVLSYADKALKSFDGDGN-KPNLLVAMASQLMGSANYGLKRFSDS 180

Query: 304 IPILERSIEIPVIGESQQHALAK------FAGHMQLGDTYAMLGQLENSIMCYSSGFEVQ 357
           +  L R+  I V  E+    + +       A  ++L +    +G+ E +I       E++
Sbjct: 181 LGYLNRANRILVKLEADGDCVVEDVRPVLHAVQLELANVKNAMGRREEAIENLKKSLEIK 240

Query: 358 RQVLGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHKANSSAPSLEEAADRRLM 417
                E    +G   R +A+A V  L F+EA      AL+IHK      S E A DRRL+
Sbjct: 241 EMTFDEDSKEMGVANRSLADAYVAVLNFNEALPYALKALEIHKKELGNNSAEVAQDRRLL 300

Query: 418 GLILDTKGNHEAALEHLVLASMAMVANGQEVEVASVDCSIGDTYLSMSRYDEAV 471
           G+I      H+ ALE   L+   +   G ++E+   +    +  +++ +Y+EA+
Sbjct: 301 GVIYSGLEQHDKALEQNRLSQRVLKNWGMKLELIRAEIDAANMKVALGKYEEAI 354