Miyakogusa Predicted Gene

Lj1g3v0342020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0342020.1 tr|G7J4W1|G7J4W1_MEDTR JmjC domain-containing
protein OS=Medicago truncatula GN=MTR_3g077420 PE=4 SV,76.11,0,A
domain family that is part of the cupin me,JmjC domain; Clavaminate
synthase-like,NULL; JMJC DOMAI,CUFF.25580.1
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63080.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-depend...   475   e-134
AT5G06550.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Transcript...    88   9e-18
AT1G78280.1 | Symbols:  | transferases, transferring glycosyl gr...    80   2e-15
AT3G20810.1 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d...    53   4e-07
AT3G20810.2 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d...    52   4e-07

>AT5G63080.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-dependent
           oxygenase superfamily protein | chr5:25300026-25302321
           REVERSE LENGTH=462
          Length = 462

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 224/340 (65%), Positives = 269/340 (79%), Gaps = 15/340 (4%)

Query: 1   MGINIKGQVEKVNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQF 60
           MGI I GQ+E++NGKELSY +FAE+++ KNQPVV++ L +  W+A  DWV+ +G PN   
Sbjct: 1   MGIQIIGQIERINGKELSYGDFAERYLAKNQPVVISDLTED-WRAREDWVSENGNPNLHV 59

Query: 61  FSTHFGASRVQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVS 120
           F+THFG SRVQVADCDTR+FTDQKR EM V++F+           Q  N+    D    S
Sbjct: 60  FATHFGKSRVQVADCDTREFTDQKRLEMSVTEFVE----------QWTNK----DSIEES 105

Query: 121 VLYLKDWHFVKEYPEYEAYSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFV 180
           VLYLKDWHFVKEYP+Y AY TP  F DDWLN YLDN+++H D D+ Q+  +I CSDYRFV
Sbjct: 106 VLYLKDWHFVKEYPDYTAYQTPPLFSDDWLNVYLDNYQMHEDRDSFQKYDQISCSDYRFV 165

Query: 181 YMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNIFDEVSD 240
           YMG KGSWTPLHADVFRSYSWSANVCGKKRWLFL P Q HLV+DR +K+CVY+IF+EV++
Sbjct: 166 YMGGKGSWTPLHADVFRSYSWSANVCGKKRWLFLPPPQSHLVYDRYMKNCVYDIFEEVNE 225

Query: 241 SKYPGFKNATWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLK 300
           +K+PGFK  TWLEC QE GEIIFVPSGW+HQV+NLEDTISINHNW NAYNLSWVW+LL K
Sbjct: 226 TKFPGFKKTTWLECIQEPGEIIFVPSGWHHQVYNLEDTISINHNWLNAYNLSWVWDLLWK 285

Query: 301 DYNEAKEYIEDIRNICDNFEGLCQRNLAANTGAVYYEIFI 340
           DY + +E IEDIR+ICD+FE +CQRNLAANTG    + F+
Sbjct: 286 DYKDTEESIEDIRDICDDFEAICQRNLAANTGMNLNDFFL 325


>AT5G06550.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Transcription
           factor jumonji/aspartyl beta-hydroxylase
           (InterPro:IPR003347), F-box domain, Skp2-like
           (InterPro:IPR022364), Transcription factor jumonji
           (InterPro:IPR013129); BEST Arabidopsis thaliana protein
           match is: transferases, transferring glycosyl groups
           (TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins
           in 292 species: Archae - 0; Bacteria - 297; Metazoa -
           877; Fungi - 168; Plants - 221; Viruses - 0; Other
           Eukaryotes - 199 (source: NCBI BLink). |
           chr5:2001246-2003068 REVERSE LENGTH=502
          Length = 502

 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 140/331 (42%), Gaps = 79/331 (23%)

Query: 6   KGQVEKVNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQFFSTHF 65
           +  + +V G  +S  +F  KF + N+PV+L G +D  W A   W                
Sbjct: 191 RDNITRVRG--ISVEDFITKFEEPNKPVLLEGCLDG-WPAIEKW---------------- 231

Query: 66  GASRVQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLK 125
             SR    D  T+   D + A   V   + + F+  D A            +    LYL 
Sbjct: 232 --SR----DYLTKVVGDVEFAVGPVEMKLEKYFRYSDGA------------REERPLYLF 273

Query: 126 DWHFVKEYPEYEA-YSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGV 184
           D  F ++ P  ++ Y  P++F +D     L N R                 DYR++ +G 
Sbjct: 274 DPKFAEKVPVLDSEYDVPVYFREDLFGV-LGNER----------------PDYRWIIIGP 316

Query: 185 KGSWTPLHADVFRSYSWSANVCGKKRWLFLDP----SQCHLVFDRNVKSCVYNI------ 234
            GS +  H D   + +W+A + G K+W+   P       H   D    +C  +I      
Sbjct: 317 AGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPPGVHPSPDGAEVACPVSIIEWFMN 376

Query: 235 -FDEVSD-SKYPGFKNATWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLS 292
            +D+  D  K P       +EC  +AGE++FVP+GW+H V NLE++I+I  N+ +  NL 
Sbjct: 377 FYDDTKDWEKKP-------IECICKAGEVMFVPNGWWHLVINLEESIAITQNYASRSNLL 429

Query: 293 WVWNLLLKDYNEAKEYIE---DIRNICDNFE 320
            V   L K    AKE +    D  N+ D F+
Sbjct: 430 NVLEFLKKP--NAKELVSGTTDRENLHDKFK 458


>AT1G78280.1 | Symbols:  | transferases, transferring glycosyl
           groups | chr1:29452823-29457118 FORWARD LENGTH=943
          Length = 943

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 57/296 (19%)

Query: 7   GQVEKVNGKELSYTEFAEKFMKKNQPVVLTGLMDHHWKACTDWVTLHGQPNFQFFSTHFG 66
           G VE+   + +S  EF++++  K +PV+L+GL D  W A   W            S  +G
Sbjct: 125 GNVER--RRNISLDEFSKEYDAK-KPVLLSGLADS-WPASNTWT-------IDQLSEKYG 173

Query: 67  ASRVQVADCDTRDFTDQKRAEMLVSDFIGRCFQVEDSAVQCNNENDKSDGQSVSVLYLKD 126
               +++           +  M   D+I        + ++   + D         LY+ D
Sbjct: 174 EVPFRISQ------RSPNKISMKFKDYI--------AYMKTQRDEDP--------LYVFD 211

Query: 127 WHFVKEYPEY-EAYSTPMFFCDDWLNFYLDNFRLHTDSDTDQQNQEICCSDYRFVYMGVK 185
             F +  PE  + YS P  F +DW                D++++      YR++ +G +
Sbjct: 212 DKFGEAAPELLKDYSVPHLFQEDWFEIL------------DKESR----PPYRWLIVGPE 255

Query: 186 GSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQCHLVFDRNVKSCVYNIFDEVSDSK--- 242
            S    H D   + +W+  +CG+KRW    P +  L    +V     ++  +   S    
Sbjct: 256 RSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEDDGDVSIDTPSSLQWW 315

Query: 243 ---YPGFKNA-TWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWV 294
              YP   +    +ECT   GE I+VPSGW+H + NLE T+++  N+ N  N  +V
Sbjct: 316 LDYYPLLADEDKPIECTLLPGETIYVPSGWWHCILNLEPTVAVTQNFVNKENFGFV 371


>AT3G20810.1 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
           Fe(II)-dependent oxygenase superfamily protein |
           chr3:7275814-7278144 FORWARD LENGTH=418
          Length = 418

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 37/178 (20%)

Query: 144 FFCDDW------LNFYLDNFRLHTDSDT-----------DQQNQ---EICCSDYRFV--- 180
           + C DW       + +L+  R +  S             DQ N+   +IC  DY FV   
Sbjct: 237 YLCSDWKQELVTFSKFLERMRTNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGG 296

Query: 181 -------YMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPS--QCHLVFDRNVKSCV 231
                  + G  G+ TPLH D    ++  A V GKK ++ L PS  Q  L        C 
Sbjct: 297 ELQSLNAWFGPAGTVTPLHHDPH--HNILAQVVGKK-YIRLYPSFLQDELYPYSETMLCN 353

Query: 232 YNI--FDEVSDSKYPGFKNATWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFN 287
            +    D + ++++P      +++C  E GE++++P  W+H V +L  ++S++  W N
Sbjct: 354 SSQVDLDNIDETEFPKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSLSVSFWWSN 411


>AT3G20810.2 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
           Fe(II)-dependent oxygenase superfamily protein |
           chr3:7275814-7278144 FORWARD LENGTH=429
          Length = 429

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 37/178 (20%)

Query: 144 FFCDDW------LNFYLDNFRLHTDSDT-----------DQQNQ---EICCSDYRFV--- 180
           + C DW       + +L+  R +  S             DQ N+   +IC  DY FV   
Sbjct: 248 YLCSDWKQELVTFSKFLERMRTNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGG 307

Query: 181 -------YMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPS--QCHLVFDRNVKSCV 231
                  + G  G+ TPLH D    ++  A V GKK ++ L PS  Q  L        C 
Sbjct: 308 ELQSLNAWFGPAGTVTPLHHDPH--HNILAQVVGKK-YIRLYPSFLQDELYPYSETMLCN 364

Query: 232 YNI--FDEVSDSKYPGFKNATWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFN 287
            +    D + ++++P      +++C  E GE++++P  W+H V +L  ++S++  W N
Sbjct: 365 SSQVDLDNIDETEFPKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSLSVSFWWSN 422