Miyakogusa Predicted Gene
- Lj1g3v0330940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0330940.1 tr|Q8H6N3|Q8H6N3_SOLLC Alkaline
alpha-galactosidase seed imbibition protein OS=Solanum lycopersicum
,51.09,2e-18,Raffinose_syn,Raffinose synthase;
(Trans)glycosidases,Glycoside hydrolase, superfamily; SUBFAMILY
NO,NODE_103735_length_270_cov_8.662963.path2.1
(106 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40390.1 | Symbols: SIP1 | Raffinose synthase family protein ... 187 8e-49
AT4G01970.1 | Symbols: AtSTS, STS | stachyose synthase | chr4:85... 138 6e-34
AT3G57520.1 | Symbols: AtSIP2, SIP2 | seed imbibition 2 | chr3:2... 82 7e-17
AT3G57520.3 | Symbols: AtSIP2, SIP2 | seed imbibition 2 | chr3:2... 82 7e-17
AT3G57520.2 | Symbols: AtSIP2, SIP2 | seed imbibition 2 | chr3:2... 82 8e-17
AT5G20250.4 | Symbols: DIN10 | Raffinose synthase family protein... 81 1e-16
AT5G20250.3 | Symbols: DIN10 | Raffinose synthase family protein... 81 2e-16
AT5G20250.2 | Symbols: DIN10 | Raffinose synthase family protein... 81 2e-16
AT5G20250.1 | Symbols: DIN10 | Raffinose synthase family protein... 81 2e-16
AT1G55740.1 | Symbols: AtSIP1, SIP1 | seed imbibition 1 | chr1:2... 71 1e-13
>AT5G40390.1 | Symbols: SIP1 | Raffinose synthase family protein |
chr5:16161720-16165085 FORWARD LENGTH=783
Length = 783
Score = 187 bits (476), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 97/106 (91%)
Query: 1 MVQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKG 60
+ ++ Y+GLHSHL++AGIDGVKVDVIH+LE L ++YGGRVDLAKAY+KALT+SV KHF G
Sbjct: 390 LAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQKYGGRVDLAKAYFKALTSSVNKHFNG 449
Query: 61 NGVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
NGVIASMEHCNDF LGTEAI+LGRVGDDFWCTDPSGD NGT+WLQ
Sbjct: 450 NGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQ 495
>AT4G01970.1 | Symbols: AtSTS, STS | stachyose synthase |
chr4:854073-856953 REVERSE LENGTH=876
Length = 876
Score = 138 bits (348), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 77/103 (74%)
Query: 4 KLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGNGV 63
+ YD +HS+L S G+ G K+DV LE+L+EE+GGRV+LAKAYY LT S+ K+F G V
Sbjct: 477 EFYDSMHSYLASVGVTGAKIDVFQTLESLAEEHGGRVELAKAYYDGLTESMIKNFNGTDV 536
Query: 64 IASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDVNGTYWLQ 106
IASM+ CN+FF L T+ I++GRVGDDFW DP GD G YWLQ
Sbjct: 537 IASMQQCNEFFFLATKQISIGRVGDDFWWQDPYGDPQGVYWLQ 579
>AT3G57520.1 | Symbols: AtSIP2, SIP2 | seed imbibition 2 |
chr3:21288982-21292694 REVERSE LENGTH=773
Length = 773
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V Y+ LHS+L S GIDGVKVDV +++ETL GGRV L ++Y +AL S+ ++F N
Sbjct: 363 VFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNFTDN 422
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
G I+ M H D L + A+ R DDF+ DP+
Sbjct: 423 GCISCMCHNTD-GLYSAKQTAIVRASDDFYPRDPA 456
>AT3G57520.3 | Symbols: AtSIP2, SIP2 | seed imbibition 2 |
chr3:21289725-21292694 REVERSE LENGTH=565
Length = 565
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V Y+ LHS+L S GIDGVKVDV +++ETL GGRV L ++Y +AL S+ ++F N
Sbjct: 363 VFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNFTDN 422
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
G I+ M H D L + A+ R DDF+ DP+
Sbjct: 423 GCISCMCHNTD-GLYSAKQTAIVRASDDFYPRDPA 456
>AT3G57520.2 | Symbols: AtSIP2, SIP2 | seed imbibition 2 |
chr3:21289299-21292694 REVERSE LENGTH=656
Length = 656
Score = 82.0 bits (201), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V Y+ LHS+L S GIDGVKVDV +++ETL GGRV L ++Y +AL S+ ++F N
Sbjct: 363 VFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNFTDN 422
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
G I+ M H D L + A+ R DDF+ DP+
Sbjct: 423 GCISCMCHNTD-GLYSAKQTAIVRASDDFYPRDPA 456
>AT5G20250.4 | Symbols: DIN10 | Raffinose synthase family protein |
chr5:6833730-6836635 FORWARD LENGTH=844
Length = 844
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V K Y+ LHS+L AG+DGVKVDV +LETL GGRV+L + +++AL +SV K+F N
Sbjct: 456 VYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFPDN 515
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 516 GCIACMSHNTDALYCSKQA-AVIRASDDFYPRDP 548
>AT5G20250.3 | Symbols: DIN10 | Raffinose synthase family protein |
chr5:6834207-6836635 FORWARD LENGTH=749
Length = 749
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V K Y+ LHS+L AG+DGVKVDV +LETL GGRV+L + +++AL +SV K+F N
Sbjct: 361 VYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFPDN 420
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 421 GCIACMSHNTDALYCSKQA-AVIRASDDFYPRDP 453
>AT5G20250.2 | Symbols: DIN10 | Raffinose synthase family protein |
chr5:6834207-6836635 FORWARD LENGTH=749
Length = 749
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V K Y+ LHS+L AG+DGVKVDV +LETL GGRV+L + +++AL +SV K+F N
Sbjct: 361 VYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFPDN 420
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 421 GCIACMSHNTDALYCSKQA-AVIRASDDFYPRDP 453
>AT5G20250.1 | Symbols: DIN10 | Raffinose synthase family protein |
chr5:6834207-6836635 FORWARD LENGTH=749
Length = 749
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V K Y+ LHS+L AG+DGVKVDV +LETL GGRV+L + +++AL +SV K+F N
Sbjct: 361 VYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFPDN 420
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDP 95
G IA M H D +A A+ R DDF+ DP
Sbjct: 421 GCIACMSHNTDALYCSKQA-AVIRASDDFYPRDP 453
>AT1G55740.1 | Symbols: AtSIP1, SIP1 | seed imbibition 1 |
chr1:20835507-20838707 REVERSE LENGTH=754
Length = 754
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 2 VQKLYDGLHSHLESAGIDGVKVDVIHLLETLSEEYGGRVDLAKAYYKALTTSVKKHFKGN 61
V Y+ LHS+L S G+DGVKVDV ++LETL +GGRV LAK Y++AL S+ ++F N
Sbjct: 367 VFSFYNDLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQALEASISRNFPDN 426
Query: 62 GVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPS 96
G+I+ M H D L + A+ R DDFW DP+
Sbjct: 427 GIISCMSHNTD-GLYSAKKTAVIRASDDFWPRDPA 460