Miyakogusa Predicted Gene
- Lj1g3v0318660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0318660.1 tr|F2DSC4|F2DSC4_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,24.22,7e-18,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopept,CUFF.25563.1
(553 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 566 e-161
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 324 1e-88
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 317 1e-86
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 309 3e-84
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 9e-84
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 307 1e-83
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 304 1e-82
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 1e-82
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 296 2e-80
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 6e-80
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 5e-78
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 288 5e-78
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 6e-77
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 7e-77
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 9e-77
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 278 6e-75
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 276 4e-74
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 275 7e-74
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 8e-74
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 9e-74
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 274 1e-73
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 273 2e-73
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 272 4e-73
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 271 8e-73
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 1e-72
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 269 5e-72
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 268 8e-72
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 9e-71
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 8e-70
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 1e-68
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 1e-68
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 1e-68
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 1e-67
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 2e-67
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 251 9e-67
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 1e-65
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 246 4e-65
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 245 7e-65
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 241 7e-64
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 8e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 239 4e-63
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 237 1e-62
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 230 2e-60
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 226 4e-59
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 5e-59
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 6e-59
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 223 2e-58
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 219 5e-57
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 218 1e-56
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 6e-56
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 9e-56
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 213 3e-55
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 2e-54
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 210 2e-54
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 4e-54
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 206 3e-53
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 7e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 8e-53
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 204 1e-52
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 203 2e-52
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 9e-52
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 195 7e-50
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 9e-48
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 7e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 119 5e-27
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 107 2e-23
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 4e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 101 1e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 95 1e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 93 4e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 9e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 89 1e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 85 1e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 83 4e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 82 1e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 6e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 77 4e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 2e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 69 6e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 69 1e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 2e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 66 5e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 62 1e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 2e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 6e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 566 bits (1459), Expect = e-161, Method: Compositional matrix adjust.
Identities = 282/550 (51%), Positives = 382/550 (69%), Gaps = 6/550 (1%)
Query: 3 TQIQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFD 62
TQ++ + E + ++ L ++LH+ + K+ L++DP++AT+L R YA +D+ SA +FD
Sbjct: 5 TQLRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFD 64
Query: 63 KMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGM 122
RSV+LWNS+IRA+A + +F +SLF +L +D +PDN+T+AC+ R +++FD
Sbjct: 65 VFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKG 124
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGC 182
LR +HG A+ SGLG D IC SA+V AYSK GL+ EA+++F I +PDL LWN +I GYGC
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
WD G+ +F+ M+ G +P+ YT+ L G+ DPSLL + +H K LDS S+V
Sbjct: 185 CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYV 244
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
G LV+MYSRC C+ SA VF SIS PDLV S+LI+GYS+CG H++ L F +L M K
Sbjct: 245 GCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK 304
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
K D +LVA VL S A+ ++ G E+H YVIR GLE D+KV SALIDMYSKCG L +
Sbjct: 305 KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMS 364
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
+F +PE+NI+S+NS+I GLGLHG AS AF F ILE GL PD TFSALL CCH+GL
Sbjct: 365 LFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGL 424
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL 482
+N+G+EIF+RMK EF I+ + EHYVYMVKL+G AG+LEEA+ SL +P+D ILGALL
Sbjct: 425 LNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALL 484
Query: 483 SCCNSCGNSELAETVAQKLFQNNPADNA-FKVMLSNIYAGDGRWDDVKNLRDKMT---GG 538
SCC N+ LAE VA+ + +N + +KVMLSN+YA GRWD+V+ LRD ++ GG
Sbjct: 485 SCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGG 544
Query: 539 LRKMPGLSWI 548
K+PG+SW
Sbjct: 545 --KLPGISWF 552
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 296/537 (55%), Gaps = 6/537 (1%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+S+ +QLH +LK+ + LV Y ++SA VFD+M+ R V WNS+I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + + +S+F ML + I+ D T V CAD+ + + R VH V +
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ C+ L+ YSK G + A VF +++ +V + S+I+GY +++F M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G PD YT+ +L A LL G+ +H ++ L D V + L+ MY++C M
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQ-CGEHEKVLLFFRKLIMERKKL--DSILVATVL 313
A VF + D+++W+ +I GYS+ C +E + LF L++E K+ D VA VL
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF--NLLLEEKRFSPDERTVACVL 506
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
+ A + G EIHGY++R+G SD V+++L+DMY+KCG L +F + ++++
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
S+ +I+G G+HG EA +F+++ + G+ D +F +LL AC H+GLV+EG F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 434 KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSEL 493
+ E I+ EHY +V +L G+L +AY +++P P D I GALL C + +L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 494 AETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
AE VA+K+F+ P + + V+++NIYA +W+ VK LR ++ GLRK PG SWIE
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 219/420 (52%), Gaps = 13/420 (3%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KSL K++ + D +KL +Y D+ A VFD++ WN ++
Sbjct: 108 KSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 167
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA------ 130
A S F ++ LF+ M+ + ++ D+YTF+CV ++ LR VHGG
Sbjct: 168 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS------FSSLRSVHGGEQLHGFI 221
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
+ SG G ++LV+ Y K V A +VF+ + E D++ WNS+I+GY + + G+
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+F M + G D T+ + G AD L+ +G+ +H + K+ + + L+ MY
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
S+C +DSA VF +S+ +V+++++I+GY++ G + + F ++ E D V
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
VL A+ + G +H ++ + L D+ VS+AL+DMY+KCG + VF M +
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRIL-EKGLAPDAATFSALLGACCHAGLVNEGREI 429
+IIS+N++I G + A+EA +F+ +L EK +PD T + +L AC ++GREI
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 202/395 (51%), Gaps = 6/395 (1%)
Query: 45 VRLYAATN--DINSAYHVFDKMST--RSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADI 100
VR Y N + + D ++T RSV N+ +R F S +NAV L DI
Sbjct: 33 VRKYVIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI 92
Query: 101 KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANR 160
P T V++ CAD+ L + V +G +D+ S L Y+ G + EA+R
Sbjct: 93 DP--RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
VF+ + + WN L++ S + + +F M G D YT + + +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
+ G+ LHG KSG + VG+ LV+ Y + + +DSA +VF ++ D+++W+++I+G
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
Y G EK L F ++++ ++D + +V A A + + G +H ++ +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+ + L+DMYSKCG L VFR M +R+++SY S+I+G G A EA ++F+ + E
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
+G++PD T +A+L C L++EG+ + + +K+
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 289/528 (54%), Gaps = 1/528 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K++H L+K+ S D F T L +YA +N A VFD+M R + WN+++ ++ +
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
A+ + ++M ++KP T V+ A + + + + +HG A+ SG
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ALV Y+K G + A ++F+G+ E ++V WNS+I Y + M +F M G +
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
P ++ G L AD L G+ +H LS + GLD + V + L+SMY +CK +D+A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F + + LV+W+A+I G++Q G L +F ++ K D+ +V+ +IA+ +
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
IHG V+R L+ +V V++AL+DMY+KCG + +F +M ER++ ++N++I G
Sbjct: 455 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR 442
G HG A +F+ + + + P+ TF +++ AC H+GLV G + F MK+ ++I+
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 574
Query: 443 PEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLF 502
+HY MV LLG AG L EA++ +P + GA+L C N AE A++LF
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 634
Query: 503 QNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+ NP D + V+L+NIY W+ V +R M GLRK PG S +E
Sbjct: 635 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 221/414 (53%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C SL +Q+ + K L Q+ F+ TKLV L+ ++ A VF+ + ++ L+++M
Sbjct: 47 CSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTM 106
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
++ FA D A+ F M D++P Y F +++ C D +L + + +HG V SG
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
LD + L + Y+K V+EA +VF+ + E DLV WN++++GY + + ++M S
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
M +P T+ +L ++ L+ +G+ +HG + +SG DS ++ + LV MY++C
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+++A ++F + ++V+W+++I Y Q ++ +L F+K++ E K + V L +
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
A ++ G IH + GL+ +V V ++LI MY KC + +F + R ++S+
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
N++I G +G +A F ++ + + PD T+ +++ A + + + I
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 13/278 (4%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L R + +H ++ L ++ L+ +Y ++++A +F K+ +R++ WN+MI
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
FA + R +A++ F M +KPD +T+ VI A A+ + +HG + S L +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ALV Y+K G + A +F+ ++E + WN++I GYG +++F M+
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 199 VGTRPDGYTLAGLL-----GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
+P+G T ++ G+ + L C S + +D H G+ +V + R
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD---HYGA-MVDLLGRA 588
Query: 254 KCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKV 290
++ A+ + P + + A++ C H+ V
Sbjct: 589 GRLNEAWDFIMQMPVKPAVNVYGAMLGA---CQIHKNV 623
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 286/530 (53%), Gaps = 5/530 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
KQ+HA +L+ L D L+ Y + +A+ +F+ M +++ W +++ + +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
A+ LF +M +KPD Y + ++ +CA LG VH + + LG D+
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG-CSAAWDV--GMQMFSSMRLV 199
++L+ Y+K + +A +VF+ A D+VL+N++I GY W++ + +F MR
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
RP T LL A + L + + +HGL K GL+ D GS L+ +YS C C+ +
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
VF + DLV W+++ +GY Q E+E+ L F +L + R++ D A ++ +
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
A+V+ G E H +++ GLE + +++AL+DMY+KCG F R+++ +NSVI
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
S HG +A +M ++++ +G+ P+ TF +L AC HAGLV +G + F+ M F I
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGI 687
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
+ EHYV MV LLG AG L +A L + +P + +LLS C GN ELAE A+
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747
Query: 500 KLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWI 548
++P D+ MLSNIYA G W + K +R++M G+ K PG SWI
Sbjct: 748 MAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 208/409 (50%), Gaps = 3/409 (0%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
QL + L+K+ +D + T L+ Y +I+ A VFD + +S W +MI
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
R ++ LF ++ ++ PD Y + V+ AC+ L + +H + GL +DA +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
L+ +Y K G V A+++FNG+ +++ W +L+SGY +A M++F+SM G +P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
D Y + +L A L G +H + K+ L +DS+V + L+ MY++C C+ A +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 264 CSISNPDLVTWSALISGYSQCG---EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+ D+V ++A+I GYS+ G E + L FR + + + ++L + A
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
++ +IHG + ++GL D+ SALID+YS C L VF M ++++ +NS+ +
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
G EA +F + PD TF+ ++ A + V G+E
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 196/401 (48%), Gaps = 12/401 (2%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
+H ++ L D + + L+ LY+ + A VF+KM R++ W++M+ A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 85 FDNAVSLF----RTMLGADIKPDNYTFACVIRACA--DNFDLGMLRLVHGGAVASGLGLD 138
++ ++ +F RT + P+ Y + I+AC+ D M+ + V SG D
Sbjct: 126 YEESLVVFLEFWRTRKDS---PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ L+ Y K G + A VF+ + E V W ++ISG V +Q+F +
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
PDGY L+ +L + L G+ +H + GL+ D+ + ++L+ Y +C + +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A+++F + N ++++W+ L+SGY Q H++ + F + K D +++L S A
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
+ G ++H Y I+ L +D V+++LIDMY+KC L VF + +++ +N++
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 379 ISG---LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
I G LG EA +F + + + P TF +LL A
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 161/315 (51%), Gaps = 5/315 (1%)
Query: 107 FACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA 166
FA +++ A + L +VHG + GL LD + L++ YS+ G + A +VF +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 167 EPDLVLWNSLISGYGCSAAWDVGMQMFSSM-RLVGTRPDGYTLAGLL---GGIADPSLLC 222
E +LV W++++S ++ + +F R P+ Y L+ + G+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
+ Q L KSG D D +VG+LL+ Y + +D A VF ++ VTW+ +ISG
Sbjct: 167 VFQ-LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVK 342
+ G L F +L+ + D +++TVL++ + + G +IH +++R+GLE D
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 343 VSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
+ + LID Y KCG + +F MP +NIIS+ +++SG + EA +F + + G
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 403 LAPDAATFSALLGAC 417
L PD S++L +C
Sbjct: 346 LKPDMYACSSILTSC 360
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 1/272 (0%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL +KQ+H + K L+ D F + L+ +Y+ + + VFD+M + + +WNSM
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ + A++LF + + +PD +TFA ++ A + + + + H + GL
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+ +AL+ Y+K G +A++ F+ A D+V WNS+IS Y +QM M
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G P+ T G+L + L+ G L + G++ ++ +VS+ R ++
Sbjct: 649 SEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 258 SAYRVFCSI-SNPDLVTWSALISGYSQCGEHE 288
A + + + P + W +L+SG ++ G E
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 293/536 (54%), Gaps = 5/536 (0%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+ L K++H L+K S D T L+ +YA +I SA+ VF+ ++ R+V W SMI
Sbjct: 156 QDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + + + LF M ++ + YT+ +I AC L + HG V SG+
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
L + ++L+ Y K G + A RVFN + DLV+W ++I GY + + + + +F M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+ V +P+ T+A +L G L +G+ +HGLS K G+ D++V + LV MY++C
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQN 393
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
A VF S D+V W+++ISG+SQ G + L F ++ E + + VA++ ++
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 317 AQTANVRPGCEIHGYVIRHGL--ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
A ++ G +H Y ++ G S V V +AL+D Y+KCG +F + E+N I+
Sbjct: 454 ASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT 513
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
++++I G G G + +F+ +L+K P+ +TF+++L AC H G+VNEG++ F M
Sbjct: 514 WSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMY 573
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
++N +HY MV +L AGELE+A ++ + +P D GA L C +L
Sbjct: 574 KDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLG 633
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
E V +K+ +P D ++ V++SN+YA DGRW+ K +R+ M GL K+ G S +E
Sbjct: 634 EIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 245/505 (48%), Gaps = 8/505 (1%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C ++ +Q H L L D ATKLV LY A VFD++ YLW M
Sbjct: 54 CTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVM 113
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
+R + L++ V L+ ++ + D+ F+ ++AC + DL + +H V
Sbjct: 114 LRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP- 172
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
D + + L+ Y+K G + A++VFN I ++V W S+I+GY + + G+ +F+
Sbjct: 173 SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNR 232
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
MR + YT L+ S L G+ HG KSG++ S + + L+ MY +C
Sbjct: 233 MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGD 292
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+ +A RVF S+ DLV W+A+I GY+ G + L F+K+ K + + +A+VL+
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
N+ G +HG I+ G+ D V++AL+ MY+KC VF + E++I+++
Sbjct: 353 CGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 411
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ-RMK 434
NS+ISG +G EA +F R+ + + P+ T ++L AC G + G + +K
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVD---KAILGALLSCCNSCGNS 491
F + ++ G+ + A + ++ E A++G ++ G+
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSL 531
Query: 492 ELAETVAQKLFQNNPADNAFKVMLS 516
EL E + +K Q P ++ F +LS
Sbjct: 532 ELFEEMLKK--QQKPNESTFTSILS 554
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 272/533 (51%), Gaps = 1/533 (0%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L R +QLHA K + + L+ LYA DI +A F + +V LWN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
A+ L N+ +FR M +I P+ YT+ +++ C DL + +H + + L
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+A CS L+ Y+KLG + A + A D+V W ++I+GY D + F M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G R D L + A L GQ +H + SG SD + LV++YSRC ++
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
+Y F D + W+AL+SG+ Q G +E+ L F ++ E ++ + + + +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
+TAN++ G ++H + + G +S+ +V +ALI MY+KCG + F + +N +S+N+
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+I+ HG SEA FD+++ + P+ T +L AC H GLV++G F+ M E+
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
+ +PEHYV +V +L AG L A Q +P D + LLS C N E+ E
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
A L + P D+A V+LSN+YA +WD R KM G++K PG SWIE
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 235/465 (50%), Gaps = 8/465 (1%)
Query: 5 IQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM 64
++WL SL ++LH+ +LK L + + KL Y D+ A+ VFD+M
Sbjct: 87 LKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM 146
Query: 65 STRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC-ADNFDLGML 123
R+++ WN MI+ A LF M+ ++ P+ TF+ V+ AC + ++
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
+H + GL + C+ L+ YS+ G V A RVF+G+ D W ++ISG +
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+++F M ++G P Y + +L L IG+ LHGL K G SD++V
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ LVS+Y + SA +F ++S D VT++ LI+G SQCG EK + F+++ ++ +
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
DS +A+++ + + + G ++H Y + G S+ K+ AL+++Y+KC + +
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 364 FRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
F N++ +N ++ GL +FR+F ++ + + P+ T+ ++L C G +
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 424 NEGREIF-QRMKDEFNIKARPEHYV--YMVKLLGSAGELEEAYNL 465
G +I Q +K F + A YV ++ + G+L+ A+++
Sbjct: 507 ELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDI 547
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 228/490 (46%), Gaps = 4/490 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q+HA +L L L+ LY+ ++ A VFD + + W +MI + +
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ A+ LF M I P Y F+ V+ AC L + +HG + G D C
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ALVS Y LG + A +F+ +++ D V +N+LI+G + M++F M L G
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
PD TLA L+ + L GQ LH + K G S++ + L+++Y++C +++A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F ++V W+ ++ Y + FR++ +E + ++L + + ++
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G +IH +I+ + + V S LIDMY+K G L + ++++S+ ++I+G
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF-QRMKDEFNIKA 441
+ +A F ++L++G+ D + + AC + EG++I Q F+
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 442 RPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
++ +V L G++EE+Y L E D AL+S GN+E A V ++
Sbjct: 627 PFQN--ALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 502 FQNNPADNAF 511
+ +N F
Sbjct: 684 NREGIDNNNF 693
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 202/413 (48%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+SL +QLH +LK S D + LV LY ++ SA H+F MS R +N++I
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + A+ LF+ M ++PD+ T A ++ AC+ + L + +H G
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ AL++ Y+K + A F ++VLWN ++ YG ++F M
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
++ P+ YT +L L +G+ +H K+ +++V S+L+ MY++ +
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
D+A+ + + D+V+W+ +I+GY+Q +K L FR+++ + D + + +++
Sbjct: 542 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
A ++ G +IH G SD+ +AL+ +YS+CG + F + I++N
Sbjct: 602 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+++SG G EA R+F R+ +G+ + TF + + A + +G+++
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 2/266 (0%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
++L +Q+HA + S D + LV LY+ I +Y F++ WN+++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
F S + A+ +F M I +N+TF ++A ++ ++ + VH +G
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ C+AL+S Y+K G + +A + F ++ + V WN++I+ Y + F M
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQG-LHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
RP+ TL G+L + L+ G ++ + GL +V M +R
Sbjct: 785 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGL 844
Query: 256 MDSAYRVFCSIS-NPDLVTWSALISG 280
+ A + PD + W L+S
Sbjct: 845 LSRAKEFIQEMPIKPDALVWRTLLSA 870
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/577 (31%), Positives = 302/577 (52%), Gaps = 36/577 (6%)
Query: 9 HSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATN--DINSAYHVFDKMST 66
H L C SL + KQ H +++T DP+ A+KL + A ++ + A VFD++
Sbjct: 33 HISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 67 RSVYLWNSMIRAFALSQRFDNAVSLFRTMLG-ADIKPDNYTFACVIRACADNFDLGMLRL 125
+ + WN++IRA+A ++ F M+ + P+ YTF +I+A A+ L + +
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAA 185
+HG AV S +G D ++L+ Y G + A +VF I E D+V WNS+I+G+ +
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 186 WDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSL 245
D +++F M + T+ G+L A L G+ + ++ ++ + + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 246 LVSMYSRCKCMDSAYRVF-------------------------------CSISNPDLVTW 274
++ MY++C ++ A R+F S+ D+V W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 275 SALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVI 333
+ALIS Y Q G+ + L+ F +L +++ KL+ I + + L++ AQ + G IH Y+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFR 393
+HG+ + V+SALI MYSKCG L VF + +R++ ++++I GL +HGC +EA
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLL 453
MF ++ E + P+ TF+ + AC H GLV+E +F +M+ + I +HY +V +L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 454 GSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKV 513
G +G LE+A +++P P ++ GALL C N LAE +L + P ++ V
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 514 MLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+LSNIYA G+W++V LR M GL+K PG S IE
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 183/600 (30%), Positives = 304/600 (50%), Gaps = 71/600 (11%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
+ Q HA +LK+ D + + KL+ Y+ N N A V + ++Y ++S+I A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA- 139
++ F ++ +F M + PD++ + + CA+ + + +H + SGL +DA
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 140 ------------------------------ICCSALVSAYSKLGLVHEANRVFNGIA--- 166
+ CSAL+ AY++ G + E R+ + +
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 167 -EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
E ++V WN ++SG+ S + MF + +G PD T++ +L + D +L +G+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMY-------------------------------SRCK 254
+HG K GL D V S ++ MY SR
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 255 CMDSAYRVFCSISNP----DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
+D A +F ++V+W+++I+G +Q G+ + L FR++ + K + + +
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
++L + A + G HG+ +R L +V V SALIDMY+KCG ++ VF +MP +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
N++ +NS+++G +HG A E +F+ ++ L PD +F++LL AC GL +EG + F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 431 QRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGN 490
+ M +E+ IK R EHY MV LLG AG+L+EAY+L + +P D + GALL+ C N
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 491 SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+LAE A+KLF P + V+LSNIYA G W +V ++R+KM GL+K PG SWI+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L + H ++ HL + + L+ +YA IN + VF+ M T+++ WNS++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG-------A 130
F++ + +S+F +++ +KPD +F ++ AC G + L G +
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC------GQVGLTDEGWKYFKMMS 516
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVG 189
G+ S +V+ + G + EA + + EPD +W +L++ C +V
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN--SCRLQNNVD 574
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGI 215
+ ++ +L P+ LL I
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNI 600
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 287/530 (54%), Gaps = 4/530 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
KQ+HA LL L F TKL+ ++ DI A VFD + ++ WN++IR ++ +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
F +A+ ++ M A + PD++TF +++AC+ L M R VH G D
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPD--LVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
+ L++ Y+K + A VF G+ P+ +V W +++S Y + +++FS MR +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
+PD L +L L G+ +H K GL+ + + L +MY++C + +A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+F + +P+L+ W+A+ISGY++ G + + F ++I + + D+I + + +++ AQ
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
++ ++ YV R DV +SSALIDM++KCG + VF +R+++ ++++I
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
G GLHG A EA ++ + G+ P+ TF LL AC H+G+V EG F RM D I
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH-KIN 456
Query: 441 ARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQK 500
+ +HY ++ LLG AG L++AY + + +P + GALLS C + EL E AQ+
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 501 LFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
LF +P++ V LSN+YA WD V +R +M GL K G SW+E
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 166/313 (53%), Gaps = 2/313 (0%)
Query: 121 GMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY 180
L+ +H + GL + L+ A S G + A +VF+ + P + WN++I GY
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
+ + + M+S+M+L PD +T LL + S L +G+ +H + G D+D
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISNPD--LVTWSALISGYSQCGEHEKVLLFFRKLI 298
V + L+++Y++C+ + SA VF + P+ +V+W+A++S Y+Q GE + L F ++
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
K D + + +VL + +++ G IH V++ GLE + + +L MY+KCG +
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 359 FGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
+F M N+I +N++ISG +G A EA MF ++ K + PD + ++ + AC
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 419 HAGLVNEGREIFQ 431
G + + R +++
Sbjct: 335 QVGSLEQARSMYE 347
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 4/277 (1%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+ L + + +HA ++K L +P L +YA + +A +FDKM + ++ LWN+MI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+A + A+ +F M+ D++PD + I ACA L R ++ S
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
D SAL+ ++K G V A VF+ + D+V+W+++I GYG + ++ +M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G P+ T GLL ++ G ++ + ++ + R +
Sbjct: 416 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHL 475
Query: 257 DSAYRVF-CSISNPDLVTWSALISGYSQCGEHEKVLL 292
D AY V C P + W AL+S C +H V L
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSA---CKKHRHVEL 509
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 285/528 (53%), Gaps = 2/528 (0%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
QLH ++ + + + L+ +Y+ + A +F MS WN MI + S
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
+ +++ F M+ + + PD TF+ ++ + + +L + +H + + LD S
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
AL+ AY K V A +F+ D+V++ ++ISGY + + ++MF + V P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
+ TL +L I L +G+ LHG K G D+ ++G ++ MY++C M+ AY +F
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 499
Query: 264 CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVR 323
+S D+V+W+++I+ +Q + FR++ + D + ++ L++ A +
Sbjct: 500 ERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSES 559
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
G IHG++I+H L SDV S LIDMY+KCG L + VF+ M E+NI+S+NS+I+ G
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619
Query: 384 LHGCASEAFRMFDRILEK-GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR 442
HG ++ +F ++EK G+ PD TF ++ +CCH G V+EG F+ M +++ I+ +
Sbjct: 620 NHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Query: 443 PEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLF 502
EHY +V L G AG L EAY +S+P P D + G LL C N ELAE + KL
Sbjct: 680 QEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLM 739
Query: 503 QNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+P+++ + V++SN +A W+ V +R M ++K+PG SWIE
Sbjct: 740 DLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 219/413 (53%), Gaps = 2/413 (0%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR--SVYLWNSMI 76
L + KQ+HA L+ +S D + +++ +YA + +F ++ R S+ WNS+I
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII 110
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+F + + A++ + ML + PD TF C+++AC + + + + G+
Sbjct: 111 SSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMD 170
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ S+L+ AY + G + +++F+ + + D V+WN +++GY A D ++ FS M
Sbjct: 171 CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM 230
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
R+ P+ T +L A L+ +G LHGL SG+D + + + L+SMYS+C
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
D A ++F +S D VTW+ +ISGY Q G E+ L FF ++I D+I +++L S+
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
++ N+ +IH Y++RH + D+ ++SALID Y KC + +F +++ +
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
++ISG +G ++ MF +++ ++P+ T ++L + GRE+
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL 463
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 214/439 (48%), Gaps = 9/439 (2%)
Query: 37 DPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTML 96
+ F A+ L++ Y I+ +FD++ + +WN M+ +A D+ + F M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 97 GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVH 156
I P+ TF CV+ CA + + +HG V SG+ + ++L+S YSK G
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 157 EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA 216
+A+++F ++ D V WN +ISGY S + + F M G PD T + LL ++
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Query: 217 DPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSA 276
L + +H + + D + S L+ Y +C+ + A +F ++ D+V ++A
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 277 LISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG 336
+ISGY G + L FR L+ + + I + ++L I ++ G E+HG++I+ G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 337 LESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFD 396
++ + A+IDMY+KCG ++ +F + +R+I+S+NS+I+ S A +F
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 397 RILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY----MVKL 452
++ G+ D + SA L AC N E F + F IK VY ++ +
Sbjct: 532 QMGVSGICYDCVSISAALSAC-----ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 453 LGSAGELEEAYNLTQSLPE 471
G L+ A N+ +++ E
Sbjct: 587 YAKCGNLKAAMNVFKTMKE 605
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 208 LAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF--CS 265
L+ LL ++P+LL G+ +H + + DS+ ++ MY+ C ++F
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 266 ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPG 325
+ + W+++IS + + G + L F+ K++ D ++ + N +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLH 385
+ V G++ + V+S+LI Y + G + +F + +++ + +N +++G
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
G + F + ++P+A TF +L C L++ G ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 289/526 (54%), Gaps = 1/526 (0%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
LH+ ++K + F L+ Y+ ++SA VF+ + + + +W ++ + +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
F++++ L M A P+NYTF ++A + VHG + + LD
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
L+ Y++LG + +A +VFN + + D+V W+ +I+ + + + + +F MR P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 205 GYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC 264
+TL+ +L G A +G+ LHGL K G D D +V + L+ +Y++C+ MD+A ++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 265 SISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRP 324
+S+ + V+W+ +I GY GE K FR+ + + + + ++ L + A A++
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGL 384
G ++HG I+ V VS++LIDMY+KCG + F VF M ++ S+N++ISG
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
HG +A R+ D + ++ P+ TF +L C +AGL+++G+E F+ M + I+ E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQN 504
HY MV+LLG +G+L++A L + +P I A+LS + N E A A+++ +
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 505 NPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
NP D A V++SN+YAG +W +V ++R M G++K PGLSWIE
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 218/469 (46%), Gaps = 16/469 (3%)
Query: 20 LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAF 79
+ AK +H +LK D F L+ Y A ++FD+M R+ + ++ + +
Sbjct: 66 ISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY 125
Query: 80 ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
A L R G ++ P +T + D ++ +H V G +A
Sbjct: 126 ACQDPIGLYSRLHRE--GHELNPHVFTSFLKLFVSLDKAEI--CPWLHSPIVKLGYDSNA 181
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
+AL++AYS G V A VF GI D+V+W ++S Y + ++ +++ S MR+
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
G P+ YT L +G+HG K+ D VG L+ +Y++ M A
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGE-HEKVLLFFRK----LIMERKKLDSILVATVLA 314
++VF + D+V WS +I+ + Q G +E V LF R ++ L SIL +
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+ G ++HG V++ G + D+ VS+ALID+Y+KC + + +F + +N +S
Sbjct: 362 KCSGL-----GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+N+VI G G +AF MF L ++ TFS+ LGAC ++ G ++ +
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV-HGLA 475
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLS 483
+ N + ++ + G+++ A ++ + E +D A AL+S
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM-ETIDVASWNALIS 523
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 188/424 (44%), Gaps = 4/424 (0%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
AK +H +LKT DP L++LY D++ A+ VF++M V W+ MI F
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ + AV LF M A + P+ +T + ++ CA G+ +HG V G LD
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+AL+ Y+K + A ++F ++ + V WN++I GY MF
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQV 445
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
T + LG A + + +G +HGL+ K+ V + L+ MY++C + A
Sbjct: 446 SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
VF + D+ +W+ALISGYS G + L + K + + VL+ +
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGL 565
Query: 322 VRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVI 379
+ G E +IR HG+E ++ + ++ + + G L + + +P E +++ + +++
Sbjct: 566 IDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
S A R + IL+ D AT+ + A I + MK E +
Sbjct: 626 SASMNQNNEEFARRSAEEILKIN-PKDEATYVLVSNMYAGAKQWANVASIRKSMK-EMGV 683
Query: 440 KARP 443
K P
Sbjct: 684 KKEP 687
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 4/315 (1%)
Query: 103 DNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF 162
D++ + ++R C D + +H + G LD + L++AY K G +A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC 222
+ + E + V + +L GY C + ++S + G + + L
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDP----IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
I LH K G DS++ VG+ L++ YS C +DSA VF I D+V W+ ++S Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVK 342
+ G E L + M ++ T L + +HG +++ D +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 343 VSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
V L+ +Y++ G + VF MP+ +++ ++ +I+ +G +EA +F R+ E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 403 LAPDAATFSALLGAC 417
+ P+ T S++L C
Sbjct: 344 VVPNEFTLSSILNGC 358
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 288/551 (52%), Gaps = 22/551 (3%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+ L+ KQ+HA L+ + F LV +Y + S+ + R + WN+++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRL---VHGGAVAS 133
+ +++ A+ R M+ ++PD +T + V+ AC+ L MLR +H A+ +
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH---LEMLRTGKELHAYALKN 331
Query: 134 G-LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
G L ++ SALV Y V RVF+G+ + + LWN++I+GY + + +
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 193 FSSMRL-VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
F M G + T+AG++ + +HG K GLD D V + L+ MYS
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLI-MERK-------- 302
R +D A R+F + + DLVTW+ +I+GY HE LL K+ +ERK
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 303 --KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
K +SI + T+L S A + + G EIH Y I++ L +DV V SAL+DMY+KCG L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 361 ICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
VF +P++N+I++N +I G+HG EA + ++ +G+ P+ TF ++ AC H+
Sbjct: 572 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 631
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKA-ILG 479
G+V+EG IF MK ++ ++ +HY +V LLG AG ++EAY L +P +KA
Sbjct: 632 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 480 ALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GG 538
+LL N E+ E AQ L Q P + V+L+NIY+ G WD +R M G
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 539 LRKMPGLSWIE 549
+RK PG SWIE
Sbjct: 752 VRKEPGCSWIE 762
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 218/433 (50%), Gaps = 36/433 (8%)
Query: 23 KQLHACLLKTHLSQDPF-YATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
KQ+HA + K D A LV LY D + Y VFD++S R+ WNS+I +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD---NFDLGMLRLVHGGAVASGLGLD 138
++++ A+ FR ML +++P ++T V+ AC++ L M + VH + G L+
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELN 235
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ + LV+ Y KLG + + + DLV WN+++S + ++ M L
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG-LDSDSHVGSLLVSMYSRCKCMD 257
G PD +T++ +L + +L G+ LH + K+G LD +S VGS LV MY CK +
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
S RVF + + + W+A+I+GYSQ ++ LL F + ME A +LA+
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF--IGMEES-------AGLLANST 406
Query: 318 QTANVRPGC----------EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
A V P C IHG+V++ GL+ D V + L+DMYS+ G + + +F M
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 368 PERNIISYNSVISGLGLHGCASEAFRM------FDRILEKG-----LAPDAATFSALLGA 416
+R+++++N++I+G +A + +R + KG L P++ T +L +
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 417 CCHAGLVNEGREI 429
C + +G+EI
Sbjct: 527 CAALSALAKGKEI 539
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 196/383 (51%), Gaps = 12/383 (3%)
Query: 49 AATNDINSAYH----VFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDN 104
+AT D+ SA +F S RS W ++R+ S AV + M+ IKPDN
Sbjct: 39 SATEDVASAVSGAPSIFISQS-RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDN 97
Query: 105 YTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS-ALVSAYSKLGLVHEANRVFN 163
Y F +++A AD D+ + + +H G G+D++ + LV+ Y K G +VF+
Sbjct: 98 YAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFD 157
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD---PSL 220
I+E + V WNSLIS W++ ++ F M P +TL ++ ++ P
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
L +G+ +H + G + +S + + LV+MY + + S+ + S DLVTW+ ++S
Sbjct: 218 LMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG-LES 339
Q + + L + R++++E + D +++VL + + +R G E+H Y +++G L+
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
+ V SAL+DMY C + G VF M +R I +N++I+G + EA +F +
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 400 EK-GLAPDAATFSALLGACCHAG 421
E GL ++ T + ++ AC +G
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSG 419
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 296/570 (51%), Gaps = 38/570 (6%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KS +AKQLHA ++T S A+ ++ +Y ++ A +F + + V W S+I
Sbjct: 19 KSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVI 77
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
R F F A++ F M + PD+ F V+++C DL VHG V G+
Sbjct: 78 RCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMD 137
Query: 137 LDAICCSALVSAYSKL-GL-----------------------------------VHEANR 160
D +AL++ Y+KL G+ + R
Sbjct: 138 CDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRR 197
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
VF + D+V +N++I+GY S ++ ++M M +PD +TL+ +L ++
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
+ G+ +HG + G+DSD ++GS LV MY++ ++ + RVF + D ++W++L++G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
Y Q G + + L FR+++ + K ++ ++V+ + A A + G ++HGYV+R G S+
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+ ++SAL+DMYSKCG + +F M + +S+ ++I G LHG EA +F+ +
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
+G+ P+ F A+L AC H GLV+E F M + + EHY + LLG AG+LE
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 461 EAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYA 520
EAYN + ++ LLS C+ N ELAE VA+K+F + + V++ N+YA
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557
Query: 521 GDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+GRW ++ LR +M GLRK P SWIE
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 294/602 (48%), Gaps = 70/602 (11%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
S + + +HA ++K+ S + F +L+ Y+ + VFDKM R++Y WNS++
Sbjct: 35 SAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVT 94
Query: 78 AFALSQRFDNAVSLFRTMLGAD-------------------------------IKPDNYT 106
D A SLFR+M D + Y+
Sbjct: 95 GLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYS 154
Query: 107 FACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA 166
FA V+ AC+ D+ VH S D SALV YSK G V++A RVF+ +
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 167 EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQG 226
+ ++V WNSLI+ + + + +F M PD TLA ++ A S + +GQ
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 227 LHGLSHKSG-LDSDSHVGSLLVSMYSRCKCMDSAYRVFCS-------------------- 265
+HG K+ L +D + + V MY++C + A +F S
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 266 -----------ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
++ ++V+W+ALI+GY+Q GE+E+ L F L E A +L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 315 SIAQTANVRPGCEIHGYVIRHGL------ESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
+ A A + G + H +V++HG E D+ V ++LIDMY KCG + G VFR M
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
ER+ +S+N++I G +G +EA +F +LE G PD T +L AC HAG V EGR
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 429 IFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSC 488
F M +F + +HY MV LLG AG LEEA ++ + +P D I G+LL+ C
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 489 GNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSW 547
N L + VA+KL + P+++ V+LSN+YA G+W+DV N+R M G+ K PG SW
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 548 IE 549
I+
Sbjct: 635 IK 636
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 301 bits (771), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 281/535 (52%), Gaps = 5/535 (0%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+S+ K + A +LK+ + +KLV DI+ A VFD MS R + WNS+I
Sbjct: 79 RSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLI 137
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+R AV ++R M+ ++ PD YT + V +A +D + HG AV GL
Sbjct: 138 AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLE 197
Query: 137 LDAICC-SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
+ + SALV Y K G EA V + + E D+VL +LI GY ++ F S
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
M + +P+ YT A +L + + G+ +HGL KSG +S + L++MY RC
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+D + RVF I P+ V+W++LISG Q G E L+ FRK++ + K +S +++ L
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
+ A G +IHG V ++G + D S LID+Y KCG VF + E ++IS
Sbjct: 378 CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISL 437
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
N++I +G EA +F+R++ GL P+ T ++L AC ++ LV EG E+F +
Sbjct: 438 NTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK 497
Query: 436 EFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAE 495
+ I +HY MV LLG AG LEEA LT + P D + LLS C E+AE
Sbjct: 498 D-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP-DLVLWRTLLSACKVHRKVEMAE 555
Query: 496 TVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ +K+ + P D +++SN+YA G+W+ V ++ KM L+K P +SW+E
Sbjct: 556 RITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVE 610
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 288/536 (53%), Gaps = 9/536 (1%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
+Q+H ++K L DP+ T L+ +Y+ + A VF + + + +WN+M+ A+A
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML---RLVHGGAVASGLGLD 138
+ +A+ LF M + PD++T + VI C+ LG+ + VH +
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV---LGLYNYGKSVHAELFKRPIQST 407
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ SAL++ YSK G +A VF + E D+V W SLISG + + +++F M+
Sbjct: 408 STIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 199 V--GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+PD + + A L G +HG K+GL + VGS L+ +YS+C
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
+ A +VF S+S ++V W+++IS YS+ E + F ++ + DS+ + +VL +I
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
+ TA++ G +HGY +R G+ SD + +ALIDMY KCGF + +F+ M +++I++N
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+I G G HG A +FD + + G +PD TF +L+ AC H+G V EG+ IF+ MK +
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
+ I+ EHY MV LLG AG LEEAY+ +++P D +I LLS + N EL
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGIL 767
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIEGS 551
A+KL + P + V L N+Y G ++ L M GL K PG SWIE S
Sbjct: 768 SAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 235/484 (48%), Gaps = 36/484 (7%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRS-VYLWNSMIRAF 79
KQ+H +L+ L D F T L+ +Y A+ VF ++ +S V LWN MI F
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 80 ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
S ++++ L+ +K + +F + AC+ + + G R +H V GL D
Sbjct: 248 GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
C++L+S YSK G+V EA VF+ + + L +WN++++ Y + + +F MR
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
PD +TL+ ++ + L G+ +H K + S S + S L+++YS+C C A
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL--DSILVATVLASIA 317
Y VF S+ D+V W +LISG + G+ ++ L F + + L DS ++ +V + A
Sbjct: 428 YLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
+R G ++HG +I+ GL +V V S+LID+YSKCG + VF M N++++NS
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNS 547
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+IS + + +F+ +L +G+ PD+ + +++L A + +G+ +
Sbjct: 548 MISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-------- 599
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
+ T L P D + AL+ CG S+ AE +
Sbjct: 600 -------------------------HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 498 AQKL 501
+K+
Sbjct: 635 FKKM 638
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 211/422 (50%), Gaps = 24/422 (5%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDK-------MSTRSVY 70
+L K +H ++ DPF AT LV +Y ++ A VFD +S R V
Sbjct: 75 NLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVT 134
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRA-CAD-NFDLGMLRLVHG 128
+WNSMI + +RF V FR ML ++PD ++ + V+ C + NF + +HG
Sbjct: 135 VWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHG 194
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP-DLVLWNSLISGYGCSAAWD 187
+ + L D+ +AL+ Y K GL +A RVF I + ++VLWN +I G+G S +
Sbjct: 195 FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE 254
Query: 188 VGMQMF-----SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ ++ +S++LV T + G LG + G+ +H K GL +D +V
Sbjct: 255 SSLDLYMLAKNNSVKLVST-----SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ L+SMYS+C + A VF + + L W+A+++ Y++ L F + +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
DS ++ V++ + G +H + + ++S + SAL+ +YSKCG
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL--EKGLAPDAATFSALLGACCHA 420
VF+ M E++++++ S+ISGL +G EA ++F + + L PD+ +++ AC A
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC--A 487
Query: 421 GL 422
GL
Sbjct: 488 GL 489
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 218/458 (47%), Gaps = 37/458 (8%)
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
NS IRA + A+ L+ G+ +TF +++AC+ +L + +HG V
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFN-------GIAEPDLVLWNSLISGYGCSA 184
G D ++LV+ Y K G + A +VF+ G++ D+ +WNS+I GY
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI--------GQGLHGLSHKSGL 236
+ G+ F M + G RPD ++L+ ++ S++C G+ +HG ++ L
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVV------SVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 237 DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP-DLVTWSALISGYSQCGEHEKVLLFFR 295
D+DS + + L+ MY + A+RVF I + ++V W+ +I G+ G E L +
Sbjct: 202 DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 296 KLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
KL S L + +Q+ N G +IH V++ GL +D V ++L+ MYSKCG
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 356 FLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLG 415
+ VF + ++ + +N++++ + A +F + +K + PD+ T S ++
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 416 ACCHAGLVNEGR----EIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE 471
C GL N G+ E+F+R I++ ++ L G +AY + +S+ E
Sbjct: 382 CCSVLGLYNYGKSVHAELFKR-----PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE 436
Query: 472 PVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADN 509
D G+L+S C N + E A K+F + D+
Sbjct: 437 K-DMVAWGSLIS--GLCKNGKFKE--ALKVFGDMKDDD 469
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 90/233 (38%), Gaps = 27/233 (11%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SLL+ K LH L+ + D L+ +Y A ++F KM +S+ WN MI
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ A+SLF M A PD+ TF +I AC H G V G +
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN-----------HSGFVEEGKNI 700
Query: 138 DAIC------------CSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSA 184
+ +V + GL+ EA + E D +W L+S
Sbjct: 701 FEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLS--ASRT 758
Query: 185 AWDVGMQMFSSMRLVGTRPD-GYTLAGLLGGIADPSLLCIGQGLHGLSHKSGL 236
+V + + S+ +L+ P+ G T L+ + L L GL + GL
Sbjct: 759 HHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 279/524 (53%), Gaps = 11/524 (2%)
Query: 35 SQDP--FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLF 92
+++P F +V+ YA + I+ A +FD++ +N++I +A ++ A+ LF
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 93 RTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKL 152
+ M + D +T + +I AC D DL ++ +H +V+ G + +A V+ YSK
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 153 GLVHEANRVFNGIAE-PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
GL+ EA VF G+ E D V WNS+I YG + ++ M G + D +TLA +
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY---RVFCSISN 268
L + L G+ HG K+G +SHVGS L+ YS+C D Y +VF I +
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 269 PDLVTWSALISGYSQCGE-HEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
PDLV W+ +ISGYS E E+ + FR++ + D V ++ + ++ +
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 328 IHGYVIRHGLESD-VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHG 386
IHG I+ + S+ + V++ALI +Y K G L VF MPE N +S+N +I G HG
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 387 CASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHY 446
+EA ++ R+L+ G+AP+ TF A+L AC H G V+EG+E F MK+ F I+ EHY
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 447 VYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNP 506
M+ LLG AG+LEEA ++P ALL C N LAE A +L P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546
Query: 507 ADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGG-LRKMPGLSWIE 549
VML+N+YA +W+++ ++R M G +RK PG SWIE
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIE 590
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 131/284 (46%), Gaps = 10/284 (3%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAY---HVFDKMSTRSVYLWNSM 75
L+ +Q H L+K Q+ + L+ Y+ + Y VF ++ + + +WN+M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 76 IRAFALSQRF-DNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
I +++++ + AV FR M +PD+ +F CV AC++ + +HG A+ S
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 135 LGLDAICC-SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
+ + I +AL+S Y K G + +A VF+ + E + V +N +I GY + ++
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQG-LHGLSHKSGLDSDSHVGSLLVSMYSR 252
M G P+ T +L A + GQ + + ++ ++ S ++ + R
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 253 CKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFR 295
++ A R ++ P V W+AL+ C +H+ + L R
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGA---CRKHKNMALAER 536
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 35/255 (13%)
Query: 211 LLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM-------------- 256
LL +A+ L G+ LH L KS + S +++ + V++YS+C +
Sbjct: 15 LLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 257 -------------DS----AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
DS A ++F I PD V+++ LISGY+ E ++ F+++
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 300 ERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHF 359
++D ++ ++A+ ++ ++H + + G +S V++A + YSK G L
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 360 GICVFRLMPE-RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
+ VF M E R+ +S+NS+I G H ++A ++ ++ KG D T +++L A
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 419 HAGLVNEGREIFQRM 433
+ GR+ ++
Sbjct: 252 SLDHLIGGRQFHGKL 266
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERN 371
+L S+A+ ++ G +H ++ + S +S+ +++YSKCG L + F E N
Sbjct: 15 LLKSVAER-DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
+ SYN ++ A ++FD I + PD +++ L+ A +F+
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYADARETFAAMVLFK 129
Query: 432 RMK 434
RM+
Sbjct: 130 RMR 132
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 272/531 (51%), Gaps = 2/531 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+ +H ++K+ D A+ LV +YA N ++ VFD+M R V WN++I F S
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ A+ LF M + +P++ + I AC+ L + +H V G LD
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
SALV Y K + A VF + LV WNS+I GY +++ + M + GTR
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
P TL +L + L G+ +HG +S +++D +V L+ +Y +C + A V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F +W+ +IS Y G K + + +++ K D + +VL + +Q A +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G +IH + LE+D + SAL+DMYSKCG +F +P+++++S+ +IS
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR 442
G HG EA FD + + GL PD T A+L AC HAGL++EG + F +M+ ++ I+
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPI 546
Query: 443 PEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKA-ILGALLSCCNSCGNSELAETVAQKL 501
EHY M+ +LG AG L EAY + Q PE D A +L L S C L + +A+ L
Sbjct: 547 IEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLL 606
Query: 502 FQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIEGS 551
+N P D + ++L N+YA WD + +R KM GLRK PG SWIE S
Sbjct: 607 VENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMS 657
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 238/466 (51%), Gaps = 3/466 (0%)
Query: 8 LHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR 67
L E +N KSL R K +H +L L +D L+ +Y D SA HVF+ R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 68 S-VYLWNSMIRAFALSQRFDNAVSLFRTMLGADI-KPDNYTFACVIRACADNFDLGMLRL 125
S VY+WNS++ ++ + F + + +F+ +L I PD++TF VI+A + R+
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAA 185
+H V SG D + S+LV Y+K L + +VF+ + E D+ WN++IS + S
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 186 WDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSL 245
+ +++F M G P+ +L + + L G+ +H K G + D +V S
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 246 LVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
LV MY +C C++ A VF + LV W+++I GY G+ + + ++I+E +
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
+ ++L + +++ N+ G IHGYVIR + +D+ V+ +LID+Y KCG + VF
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 366 LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+ S+N +IS G +A ++D+++ G+ PD TF+++L AC + +
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 426 GREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE 471
G++I + E ++ ++ + G +EA+ + S+P+
Sbjct: 429 GKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 5/428 (1%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L R K++H +K D + + LV +Y + + A VF KM +S+ WNSMI+
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
+ + V + M+ +P T ++ AC+ + +L + +HG + S + D
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+L+ Y K G + A VF+ + WN +IS Y W ++++ M
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
VG +PD T +L + + L G+ +H +S L++D + S L+ MYS+C
Sbjct: 404 VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKE 463
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A+R+F SI D+V+W+ +IS Y G+ + L F ++ K D + + VL++
Sbjct: 464 AFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGH 523
Query: 319 TANVRPGCEIHGYV-IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER--NIISY 375
+ G + + ++G+E ++ S +ID+ + G L + + PE N
Sbjct: 524 AGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELL 583
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
+++ S LH S R+ R+L + DA+T+ L + R + +MK
Sbjct: 584 STLFSACCLHLEHSLGDRI-ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMK- 641
Query: 436 EFNIKARP 443
E ++ +P
Sbjct: 642 EMGLRKKP 649
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 280/528 (53%), Gaps = 34/528 (6%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+ +H+ ++ L + KL+R YA+ D+ SA VFD++ R+V + N MIR++ +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ V +F TM G +++PD+YTF CV++AC+ + + + R +HG A GL
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ LVS Y K G + EA V + ++ D+V WNSL+ GY + +D +++ M V
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
D T+A LL +++ + + MY + +
Sbjct: 239 HDAGTMASLLPAVSNTTTENV-------------------------MYVK--------DM 265
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F + LV+W+ +I Y + + + + ++ + + D++ + +VL + T+ +
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G +IHGY+ R L ++ + +ALIDMY+KCG L VF M R+++S+ ++IS
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR 442
G G +A +F ++ + GL PD+ F L AC HAGL+ EGR F+ M D + I R
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 443 PEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLF 502
EH MV LLG AG+++EAY Q + ++ + GALL C ++++ A KLF
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 503 QNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
Q P + + V+LSNIYA GRW++V N+R+ M + GL+K PG S +E
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 187/456 (41%), Gaps = 84/456 (18%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+++ +++H K LS F LV +Y ++ A V D+MS R V WNS++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+A +QRFD+A+ + R M I D T A ++ A ++ ++
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVM-------------- 260
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
Y K +F + + LV WN +I Y +A ++++S M
Sbjct: 261 -----------YVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME 301
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G PD ++ +L D S L +G+ +HG + L + + + L+ MY++C C++
Sbjct: 302 ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE 361
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
A VF ++ + D+V+W+A+IS Y G + F KL DSI T LA+
Sbjct: 362 KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAAC- 420
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN- 376
S G L G F+LM + I+
Sbjct: 421 ----------------------------------SHAGLLEEGRSCFKLMTDHYKITPRL 446
Query: 377 ----SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQR 432
++ LG G EA+R I + + P+ + ALLGAC V+ +I
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRF---IQDMSMEPNERVWGALLGAC----RVHSDTDIGLL 499
Query: 433 MKDEFNIKARPE---HYVYMVKLLGSAGELEEAYNL 465
D+ + PE +YV + + AG EE N+
Sbjct: 500 AADKL-FQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 534
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 296/571 (51%), Gaps = 37/571 (6%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATND--INSAYHVFDKMSTRSVYLWN 73
CK LL KQ+ A ++ L DPF +++L+ A + ++ + + + +++ WN
Sbjct: 63 CKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWN 122
Query: 74 SMIRAFALSQRFDNAVSLFRTMLG---ADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
IR F+ S+ + L++ ML + +PD++T+ + + CAD + ++ G
Sbjct: 123 VTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHV 182
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
+ L L + +A + ++ G + A +VF+ DLV WN LI+GY + +
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
++ M G +PD T+ GL+ + L G+ + ++GL + + L+ M+
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF 302
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG------------EHEKVLLF----- 293
S+C + A R+F ++ +V+W+ +ISGY++CG E + V+L+
Sbjct: 303 SKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIG 362
Query: 294 --------------FRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
F+++ K D I + L++ +Q + G IH Y+ ++ L
Sbjct: 363 GSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL 422
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
+V + ++L+DMY+KCG + + VF + RN ++Y ++I GL LHG AS A F+ ++
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGEL 459
+ G+APD TF LL ACCH G++ GR+ F +MK FN+ + +HY MV LLG AG L
Sbjct: 483 DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLL 542
Query: 460 EEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIY 519
EEA L +S+P D A+ GALL C GN EL E A+KL + +P+D+ V+L +Y
Sbjct: 543 EEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMY 602
Query: 520 AGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
W+D K R M G+ K+PG S IE
Sbjct: 603 GEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 287/538 (53%), Gaps = 4/538 (0%)
Query: 15 VCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
V + +L L++ ++K S + T ++ +Y++ D+ SA +FD ++ R WN+
Sbjct: 211 VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNT 270
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
MI + + ++ + FR ML + + P +T++ V+ C+ + +L+H + S
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
D +AL+ Y G + EA VF I P+LV WNS+ISG + + M M+
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 195 SM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
+ R+ RPD YT + + A+P G+ LHG K G + VG+ L+SMY +
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKN 450
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
+ +SA +VF + D+V W+ +I G+S+ G E + FF ++ E+ + D +++V+
Sbjct: 451 REAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI 510
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
+ + A +R G H IR G + + V AL+DMY K G +F L ++
Sbjct: 511 GACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLK 570
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
+NS++ HG +A F++ILE G PDA T+ +LL AC H G +G+ ++ +M
Sbjct: 571 CWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM 630
Query: 434 KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAIL-GALLSCCNSCGNSE 492
K++ IKA +HY MV L+ AG ++EA L + P ++A L LLS C + N +
Sbjct: 631 KEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQ 689
Query: 493 LAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ A+++ + +P D A ++LSN+YA +GRW+DV +R K+ G K PGLSWIE
Sbjct: 690 IGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIE 747
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 9/429 (2%)
Query: 11 ELSNVCKS---LLRAKQLHACLLKT---HLSQDPFYATKLVRLYAATNDINSAYHVFDKM 64
EL+ C S L RA+Q+HA +L ++ P+ L+ +Y + A VFDKM
Sbjct: 99 ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKM 158
Query: 65 STRSVYLWNSMIRAFALSQRFDN-AVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML 123
R+V +N++ A++ + F + A L M +KP++ TF +++ CA D+ M
Sbjct: 159 PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG 218
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
++ + G + + ++++ YS G + A R+F+ + D V WN++I G +
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ G+ F +M + G P +T + +L G + +G+ +H S +D +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLI-MERK 302
+ L+ MY C M A+ VF I NP+LV+W+++ISG S+ G E+ +L +R+L+ M
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
+ D + +++ A+ G +HG V + G E V V + L+ MY K
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
VF +M ER+++ + +I G G + A + F + + D + S+++GAC +
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 423 VNEGREIFQ 431
+ +G E+F
Sbjct: 519 LRQG-EVFH 526
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 246 LVSMYSRCKCMDSAYRVFCSISNPDLVTWSAL--ISGYSQCGE--HEKVLL---FFRKLI 298
L+SMY RC ++ A +VF + ++VT L + Y G H +++ F
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSA---LIDMYSKCG 355
M ++ S +V ++ T ++ +IH V+ G + + A LI MY +CG
Sbjct: 88 MPLNEIASSVVELTRKCVSITV-LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG 146
Query: 356 FLHFGICVFRLMPERNIISYNSVISGLGLH-GCASEAFRMFDRILEKGLAPDAATFSALL 414
L VF MP RN++SYN++ S + AS AF + + + + P+++TF++L+
Sbjct: 147 SLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLV 206
Query: 415 GAC 417
C
Sbjct: 207 QVC 209
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 290/539 (53%), Gaps = 9/539 (1%)
Query: 17 KSLLRAKQLHACLL-KTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
K + +Q+H ++ K L P T LV +YA + A VF S R V+ +N++
Sbjct: 74 KDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNAL 132
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
I F ++ +A+ +R M I PD YTF +++ +D +L ++ VHG A G
Sbjct: 133 ISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGF 191
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAE-PDLVLWNSLISGYGCSAAWDVGMQMFS 194
D S LV++YSK V +A +VF+ + + D VLWN+L++GY ++ + +FS
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
MR G +T+ +L + G+ +HGL+ K+G SD V + L+ MY + K
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
++ A +F ++ DL TW++++ + CG+H+ L F +++ + D + + TVL
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP 371
Query: 315 SIAQTANVRPGCEIHGYVIRHGL----ESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
+ + A++R G EIHGY+I GL S+ + ++L+DMY KCG L VF M +
Sbjct: 372 TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
+ S+N +I+G G+ C A MF + G+ PD TF LL AC H+G +NEGR
Sbjct: 432 DSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFL 491
Query: 431 QRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGN 490
+M+ +NI +HY ++ +LG A +LEEAY L S P + + ++LS C GN
Sbjct: 492 AQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGN 551
Query: 491 SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWI 548
+LA ++L + P V++SN+Y G++++V ++RD M ++K PG SWI
Sbjct: 552 KDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 298/545 (54%), Gaps = 10/545 (1%)
Query: 14 NVCKSLLRAKQLHACLLK--THLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL 71
++ +S+ +A + +LK +D F + + +YA DI S+ VFD R++ +
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGA-DIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
WN+MI + + ++ LF +G+ +I D T+ A + + + R HG
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
+ L + ++L+ YS+ G VH++ VF + E D+V WN++IS + + D G+
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+ M+ G + D T+ LL ++ IG+ H + G+ + + S L+ MY
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMY 463
Query: 251 SRCKCMDSAYRVF--CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
S+ + + ++F + D TW+++ISGY+Q G EK L FRK++ + + +++
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
VA++L + +Q +V G ++HG+ IR L+ +V V+SAL+DMYSK G + + +F
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
ERN ++Y ++I G G HG A +F + E G+ PDA TF A+L AC ++GL++EG +
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 429 IFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAIL-GALLSCCNS 487
IF+ M++ +NI+ EHY + +LG G + EAY + L E + A L G+LL C
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 488 CGNSELAETVAQKLFQNNPADN--AFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPG 544
G ELAETV+++L + + N ++V+LSN+YA + +W V +R M GL+K G
Sbjct: 704 HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVG 763
Query: 545 LSWIE 549
S IE
Sbjct: 764 RSGIE 768
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 213/423 (50%), Gaps = 19/423 (4%)
Query: 60 VFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFD 119
VFD M ++V WN++I + + R A F M+ ++KP +F V A + +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 120 LGMLRLVHGGAVASG--LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLI 177
+ + +G + G D S+ +S Y++LG + + RVF+ E ++ +WN++I
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 178 SGYGCSAAWDVGMQMFSSMRLVGTRP---DGYTLAGLLGGIADPSLLCIGQGLHGLSHKS 234
Y + +++F + +G++ D T ++ + +G+ HG K+
Sbjct: 290 GVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 235 GLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFF 294
+ + + L+ MYSRC + ++ VF S+ D+V+W+ +IS + Q G ++ L+
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 295 RKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKC 354
++ + K+D I V +L++ + N G + H ++IR G++ + ++S LIDMYSK
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKS 466
Query: 355 GFLHFGICVFR--LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSA 412
G + +F ER+ ++NS+ISG +G + F +F ++LE+ + P+A T ++
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVAS 526
Query: 413 LLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY----MVKLLGSAGELEEAYNLTQS 468
+L AC G V+ G+++ F+I+ + V+ +V + AG ++ A ++
Sbjct: 527 ILPACSQIGSVDLGKQLHG-----FSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 469 LPE 471
E
Sbjct: 582 TKE 584
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 218/511 (42%), Gaps = 49/511 (9%)
Query: 32 THLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSL 91
T Q P ++L ++ N A +FD + + LWN++I F + A+
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNP-QLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLF 92
Query: 92 FRTMLGADIKP----DNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVS 147
+ M P D YT++ ++ACA+ +L + VH + + ++L++
Sbjct: 93 YSRM--KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 148 AYSKLGLVHE------ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
Y + +VF+ + ++V WN+LIS Y + + F M +
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLD--SDSHVGSLLVSMYSRCKCMDSA 259
+P + + ++ + +GL K G + D V S +SMY+ ++S+
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 260 YRVFCSISNPDLVTWSALISGYSQCG-EHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
RVF S ++ W+ +I Y Q E + LF + + D + ++++
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSA 330
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
V G + HG+V ++ E + + ++L+ MYS+CG +H VF M ER+++S+N++
Sbjct: 331 LQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM 390
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC-----------CHAGLVNEGR 427
IS +G E + + ++G D T +ALL A HA L+ +G
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI 450
Query: 428 EIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE-----PVDKAILGALL 482
+ F+ M Y++ + +G + ++Q L E D+A +++
Sbjct: 451 Q-FEGMNS------------YLIDMYSKSGLIR----ISQKLFEGSGYAERDQATWNSMI 493
Query: 483 SCCNSCGNSELAETVAQKLFQNNPADNAFKV 513
S G++E V +K+ + N NA V
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 282/538 (52%), Gaps = 5/538 (0%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KS+ +H +L++ +D + L+ +Y + A VFD M R V WN+MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + ++A+ +F M+ + D+ T ++ C DL M R VH LG
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ALV+ Y K G + EA VF+ + D++ W +I+GY + +++ M
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+ G RP+ T+A L+ D + G+ LHG + + + SD + + L+SMY++CK +
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
D +RVF S WSA+I+G Q L F+++ E + + + ++L +
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE----RNI 372
A A++R IH Y+ + G S + ++ L+ +YSKCG L +F + E +++
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 373 ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQR 432
+ + ++ISG G+HG A ++F ++ G+ P+ TF++ L AC H+GLV EG +F+
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 433 MKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSE 492
M + + AR HY +V LLG AG L+EAYNL ++P + GALL+ C + N +
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQ 610
Query: 493 LAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
L E A KLF+ P + V+L+NIYA GRW D++ +R M GLRK PG S IE
Sbjct: 611 LGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 237/507 (46%), Gaps = 25/507 (4%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+S+ + K LH C + T + L YA I A +F++M S+ +N +I
Sbjct: 29 QSISKTKALH-CHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVI 87
Query: 77 RAFALSQRFDNAVSLFRTMLGADIK--PDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
R + + +A+S+F M+ +K PD YT+ V +A + + + +VHG + S
Sbjct: 88 RMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSW 147
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
G D +AL++ Y G V A VF+ + D++ WN++ISGY + + + MF
Sbjct: 148 FGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M D T+ +L L +G+ +H L + L V + LV+MY +C
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCG 267
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
MD A VF + D++TW+ +I+GY++ G+ E L R + E + +++ +A++++
Sbjct: 268 RMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
V G +HG+ +R + SD+ + ++LI MY+KC + VF + +
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
++++I+G + S+A +F R+ + + P+ AT ++LL A +A L + ++
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALAD--------LR 437
Query: 435 DEFNIKARPEHYVYM---------VKLLGSAGELEEAYNLTQSLPEP---VDKAILGALL 482
NI +M V + G LE A+ + + E D + GAL+
Sbjct: 438 QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 483 SCCNSCGNSELAETVAQKLFQNNPADN 509
S G+ A V ++ ++ N
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPN 524
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/573 (29%), Positives = 311/573 (54%), Gaps = 44/573 (7%)
Query: 20 LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAF 79
L QLHA ++ + D F A+KL+ Y + A HVFD+++ R+ + +N+++ A+
Sbjct: 39 LHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAY 98
Query: 80 ALSQRFDNAVSLFRTMLGAD------IKPDNYTFACVIRACA--DNFDLGML-RLVHGGA 130
+ + +A SLF + +G+ +PD+ + +CV++A + D+F LG L R VHG
Sbjct: 99 TSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
+ G D + +++ Y+K + A +VF+ ++E D+V WNS+ISGY S +++
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 191 QMFSSMRLVGT-RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
+M+ +M +P+G T+ + S L G +H ++ + D + + ++
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 250 YSRCKCMDSAYRVFCSISNPD-------------------------------LVTWSALI 278
Y++C +D A +F +S D L TW+A+I
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMI 338
Query: 279 SGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
SG Q HE+V+ FR++I + +++ ++++L S+ ++N++ G EIH + IR+G +
Sbjct: 339 SGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRI 398
+++ V++++ID Y+K GFL VF +R++I++ ++I+ +HG + A +FD++
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Query: 399 LEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGE 458
G PD T +A+L A H+G + + IF M +++I+ EHY MV +L AG+
Sbjct: 459 QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGK 518
Query: 459 LEEAYNLTQSLP-EPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSN 517
L +A +P +P+ K + GALL+ + G+ E+A +LF+ P + +++N
Sbjct: 519 LSDAMEFISKMPIDPIAK-VWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMAN 577
Query: 518 IYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+Y GRW++ + +R+KM GL+K+PG SWIE
Sbjct: 578 LYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIE 610
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 281/544 (51%), Gaps = 10/544 (1%)
Query: 19 LLRAKQLHACLLKT---HLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
L KQ+H LL + + +D F + L R A A + ++ T S+ LW+S+
Sbjct: 14 FLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSL 73
Query: 76 IRAFALSQRFDNAVSL--FRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS 133
I F+ + +S +R M + P +TF +++A D + H V
Sbjct: 74 IGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF-HAHIVKF 132
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
GL D ++L+S YS GL A+R+F+G + D+V W ++I G+ + + M F
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG-LDSDSHVGSLLVSMYSR 252
M+ G + T+ +L + G+ +HGL ++G + D +GS LV MY +
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
C C D A +VF + + ++VTW+ALI+GY Q +K +L F +++ + +++V
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI 372
L++ A + G +H Y+I++ +E + + LID+Y KCG L I VF + E+N+
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 373 ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQR 432
++ ++I+G HG A +AF +F +L ++P+ TF A+L AC H GLV EGR +F
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLS 432
Query: 433 MKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSE 492
MK FN++ + +HY MV L G G LEEA L + +P + GAL C + E
Sbjct: 433 MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Query: 493 LAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE-- 549
L + A ++ + P+ + +L+N+Y+ WD+V +R +M + K PG SWIE
Sbjct: 493 LGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Query: 550 GSYC 553
G C
Sbjct: 553 GKLC 556
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 30/201 (14%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L R +++H ++K + + T L+ LY + A VF+++ ++VY W +MI
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
FA +A LF TML + + P+ TF V+ ACA HGG V G L
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA-----------HGGLVEEGRRL 429
Query: 138 --------------DAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGC 182
D C +V + + GL+ EA + + EP V+W +L C
Sbjct: 430 FLSMKGRFNMEPKADHYAC--MVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG--SC 485
Query: 183 SAAWDVGMQMFSSMRLVGTRP 203
D + +++ R++ +P
Sbjct: 486 LLHKDYELGKYAASRVIKLQP 506
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 277/530 (52%), Gaps = 4/530 (0%)
Query: 24 QLHACLLKTHLSQDPFYATK--LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
Q+HA +K +PF L++ Y ++ A +F+++ + +N++I +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ ++ LF M + +P ++TF+ V++A D + + +H +V +G DA
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+ ++ YSK V E +F+ + E D V +N +IS Y + ++ + F M+ +G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
+ A +L A+ S L +G+ LH + + DS HVG+ LV MY++C+ + A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
+F S+ V+W+ALISGY Q G H L F K+ + D ATVL + A A+
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
+ G ++H ++IR G +V S L+DMY+KCG + + VF MP+RN +S+N++IS
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKA 441
+G A F +++E GL PD+ + +L AC H G V +G E FQ M + I
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITP 587
Query: 442 RPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
+ +HY M+ LLG G EA L +P D+ + ++L+ C N LAE A+KL
Sbjct: 588 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Query: 502 FQ-NNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
F D A V +SNIYA G W+ V++++ M G++K+P SW+E
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVE 697
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/572 (24%), Positives = 257/572 (44%), Gaps = 61/572 (10%)
Query: 15 VCKSLLRAKQLHAC--LLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
+ + LLR Q+ A + ++ ++ + T D++SA +FD M R+V W
Sbjct: 54 IVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTW 113
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGAD--IKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
++ +A + FD A LFR M + PD+ TF ++ C D + VH A
Sbjct: 114 TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFA 173
Query: 131 VASGLGLDAI--CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDV 188
V G + + L+ +Y ++ + A +F I E D V +N+LI+GY +
Sbjct: 174 VKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
+ +F MR G +P +T +G+L + +GQ LH LS +G D+ VG+ ++
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILD 293
Query: 249 MYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
YS+ + +F + D V+++ +IS YSQ ++E L FFR++ +
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
AT+L+ A ++++ G ++H + +S + V ++L+DMY+KC +F+ +P
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 369 ERNIISYNSVISGL---GLHGCASEAFRMFDRILEKGLAPDAATF-----------SALL 414
+R +S+ ++ISG GLHG ++F ++ L D +TF S LL
Sbjct: 414 QRTTVSWTALISGYVQKGLHGA---GLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470
Query: 415 GACCHAGLVNEGR------------------------EIFQRMKDEFNIKARPEHYVYMV 450
G HA ++ G ++F+ M D + + ++
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-----WNALI 525
Query: 451 KLLGSAGELEEAY----NLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ---KLFQ 503
G+ E A + +S +P +ILG +L+ C+ CG E Q ++
Sbjct: 526 SAHADNGDGEAAIGAFAKMIESGLQPDSVSILG-VLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 504 NNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
P + ML ++ +GR+ + + L D+M
Sbjct: 585 ITPKKKHYACML-DLLGRNGRFAEAEKLMDEM 615
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 200/425 (47%), Gaps = 3/425 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+QLHA + T S+D +++ Y+ + + +FD+M +N +I +++ +
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+++ ++ FR M N+ FA ++ A+ L M R +H A+ +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
++LV Y+K + EA +F + + V W +LISGY G+++F+ MR R
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
D T A +L A + L +G+ LH +SG + GS LV MY++C + A +V
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F + + + V+W+ALIS ++ G+ E + F K+I + DS+ + VL + + V
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 323 RPGCE-IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVIS 380
G E +G+ K + ++D+ + G + MP E + I ++SV++
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 629
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
+H S A R +++ DAA + ++ AG + R++ + M+ E IK
Sbjct: 630 ACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR-ERGIK 688
Query: 441 ARPEH 445
P +
Sbjct: 689 KVPAY 693
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 2/265 (0%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL +QLH L LV +YA A +F + R+ W ++I
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ + LF M G++++ D TFA V++A A L + + +H + SG
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+ S LV Y+K G + +A +VF + + + V WN+LIS + + + + F+ M
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G +PD ++ G+L + + G + +S G+ + ++ + R
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 257 DSAYRVFCSIS-NPDLVTWSALISG 280
A ++ + PD + WS++++
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNA 630
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 290/550 (52%), Gaps = 6/550 (1%)
Query: 3 TQIQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFD 62
+++Q + + +S C ++ KQ+H L+ HL D F L++ +Y +F
Sbjct: 11 SKVQQIKTLISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFS 69
Query: 63 KMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC--ADNFDL 120
+++L+NS+I F + F + LF ++ + +TF V++AC A + L
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL 129
Query: 121 GMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY 180
G+ +H V G D ++L+S YS G +++A+++F+ I + +V W +L SGY
Sbjct: 130 GID--LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
S + +F M +G +PD Y + +L L G+ + + + +S
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
V + LV++Y++C M+ A VF S+ D+VTWS +I GY+ ++ + F +++ E
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
K D + L+S A + G + RH +++ +++ALIDMY+KCG + G
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARG 367
Query: 361 ICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
VF+ M E++I+ N+ ISGL +G +F +F + + G++PD +TF LL C HA
Sbjct: 368 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGA 480
GL+ +G F + + +K EHY MV L G AG L++AY L +P + + GA
Sbjct: 428 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 487
Query: 481 LLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGL 539
LLS C +++LAETV ++L P + V LSNIY+ GRWD+ +RD M G+
Sbjct: 488 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 547
Query: 540 RKMPGLSWIE 549
+K+PG SWIE
Sbjct: 548 KKIPGYSWIE 557
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 283/530 (53%), Gaps = 5/530 (0%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS-TRSVYLWNSMIRAF 79
A Q+HA + K+ D A L+ +Y+ + DI+ + VF+ + + + N MI +F
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428
Query: 80 ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
+ S++ A+ LF ML ++ D ++ C + + D +LG + VHG + SGL LD
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFS-VCSLLSVLDCLNLG--KQVHGYTLKSGLVLDL 485
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
S+L + YSK G + E+ ++F GI D W S+ISG+ + +FS M
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
GT PD TLA +L + L G+ +HG + ++G+D +GS LV+MYS+C + A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
+V+ + D V+ S+LISGYSQ G + L FR ++M +DS ++++L + A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
G ++H Y+ + GL ++ V S+L+ MYSK G + F + ++I++ ++I
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
+ HG A+EA ++++ + EKG PD TF +L AC H GLV E M ++ I
Sbjct: 726 ASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGI 785
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
+ HYV MV LG +G L EA + ++ D + G LL+ C G EL + A+
Sbjct: 786 EPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAK 845
Query: 500 KLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWI 548
K + P+D + LSNI A G WD+V+ R M G G++K PG S +
Sbjct: 846 KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 200/391 (51%), Gaps = 9/391 (2%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIK 101
+ L+ +++ AY VF + +VY WN++I +Q + LF M K
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 102 PDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRV 161
PD+YT++ V+ ACA L ++V + G D C+A+V Y+K G + EA V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 162 FNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLL 221
F+ I P +V W ++SGY S +++F MR G + T+ ++ PS++
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC---SISNPDLVTWSALI 278
C +H KSG DS V + L+SMYS+ +D + +VF I ++V + +I
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMI 425
Query: 279 SGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
+ +SQ + K + F +++ E + D V ++L S+ N+ G ++HGY ++ GL
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL-SVLDCLNL--GKQVHGYTLKSGLV 482
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRI 398
D+ V S+L +YSKCG L +F+ +P ++ + S+ISG +G EA +F +
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 399 LEKGLAPDAATFSALLGACCHAGLVNEGREI 429
L+ G +PD +T +A+L C + G+EI
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 146/295 (49%), Gaps = 1/295 (0%)
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
L D +L+S YS G + +A ++F+ I +PD+V N +ISGY ++ ++ FS
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M +G + + ++ + + + + K G V S L+ ++S+
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
+ AY+VF + ++ W+ +I+G + + V F ++ + +K DS ++VLA
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+ A +R G + VI+ G E DV V +A++D+Y+KCG + + VF +P +++S
Sbjct: 260 ACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+ ++SG A A +F + G+ + T ++++ AC +V E ++
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 286/542 (52%), Gaps = 17/542 (3%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C++++ ++H LK D + A L+ LY+ + +A +FD+M R + WN+M
Sbjct: 163 CRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 222
Query: 76 IRAFALSQRFDNAVSL---FRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
I + S A++L R M D+ T ++ AC + D +H ++
Sbjct: 223 ISGYCQSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
GL + + L+ Y++ G + + +VF+ + DL+ WNS+I Y + + +
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG-LDSDSHVGSLLVSMYS 251
F MRL +PD TL L ++ + + + G + + G D +G+ +V MY+
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK---KLDSIL 308
+ +DSA VF + N D+++W+ +ISGY+Q G + + + IME + +
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN--IMEEEGEIAANQGT 453
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
+VL + +Q +R G ++HG ++++GL DV V ++L DMY KCG L + +F +P
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
N + +N++I+ G HG +A +F +L++G+ PD TF LL AC H+GLV+EG+
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 429 IFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSC 488
F+ M+ ++ I +HY MV + G AG+LE A +S+ D +I GALLS C
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 489 GNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSW 547
GN +L + ++ LF+ P + V+LSN+YA G+W+ V +R G GLRK PG S
Sbjct: 634 GNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSS 693
Query: 548 IE 549
+E
Sbjct: 694 ME 695
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 249/516 (48%), Gaps = 26/516 (5%)
Query: 12 LSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL 71
L C +L AK LHA L+ + Q+ + KLV LY ++ A H FD + R VY
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 72 WNSMIRAFALSQRFDNAVSLFRT-MLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
WN MI + + + F ML + + PD TF V++AC D +H A
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK---IHCLA 176
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
+ G D ++L+ YS+ V A +F+ + D+ WN++ISGY S +
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+ + +R + D T+ LL + G +H S K GL+S+ V + L+ +Y
Sbjct: 237 TLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
+ + +VF + DL++W+++I Y + + + F+++ + R + D + +
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHG-LESDVKVSSALIDMYSKCGFLHFGICVFRLMPE 369
++ + ++Q ++R + G+ +R G D+ + +A++ MY+K G + VF +P
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 370 RNIISYNSVISGLGLHGCASEAFRMFDRILEKG-LAPDAATFSALLGACCHAGLVNEGRE 428
++IS+N++ISG +G ASEA M++ + E+G +A + T+ ++L AC AG + +G +
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 429 IFQRM------KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL 482
+ R+ D F + + + Y G G LE+A +L +P V+ L+
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMY-------GKCGRLEDALSLFYQIPR-VNSVPWNTLI 524
Query: 483 SCCNSCGNSELAETVAQKLFQN--NPADNAFKVMLS 516
+C G+ E A + +++ P F +LS
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 282/532 (53%), Gaps = 4/532 (0%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
K +H +K L ++ L+ +Y+ I +A +F + ++V WN+M+ F+
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 82 SQRFDNAVSLFRTML--GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
+ R ML G D+K D T + C L L+ +H ++ +
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
+ +A V++Y+K G + A RVF+GI + WN+LI G+ S + + M++
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
G PD +T+ LL + L +G+ +HG ++ L+ D V ++S+Y C + +
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
+F ++ + LV+W+ +I+GY Q G ++ L FR++++ +L I + V + +
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 610
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
++R G E H Y ++H LE D ++ +LIDMY+K G + VF + E++ S+N++I
Sbjct: 611 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
G G+HG A EA ++F+ + G PD TF +L AC H+GL++EG +MK F +
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLT-QSLPEPVDKAILGALLSCCNSCGNSELAETVA 498
K +HY ++ +LG AG+L++A + + + E D I +LLS C N E+ E VA
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 499 QKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
KLF+ P V+LSN+YAG G+W+DV+ +R +M LRK G SWIE
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 842
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 209/408 (51%), Gaps = 13/408 (3%)
Query: 32 THLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSL 91
T L D T+++ +YA + + VFD + +++++ WN++I +++ ++ +D +
Sbjct: 114 TRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLET 173
Query: 92 FRTMLGA-DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYS 150
F M+ D+ PD++T+ CVI+ACA D+G+ VHG V +GL D +ALVS Y
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233
Query: 151 KLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV----GTRPDGY 206
G V +A ++F+ + E +LV WNS+I + + + + M PD
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 207 TLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI 266
TL +L A + +G+G+HG + K LD + + + L+ MYS+C C+ +A +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 267 SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIM--ERKKLDSILVATVLASIAQTANVRP 324
+N ++V+W+ ++ G+S G+ R+++ E K D + + + + +
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGL 384
E+H Y ++ + V++A + Y+KCG L + VF + + + S+N++I G
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG--- 470
Query: 385 HGCASEAFRMFDRILE---KGLAPDAATFSALLGACCHAGLVNEGREI 429
H +++ D L+ GL PD+ T +LL AC + G+E+
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 11/315 (3%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KSL K++H +++ L +D F ++ LY ++ + +FD M +S+ WN++I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + D A+ +FR M+ I+ + V AC+ L + R H A+ L
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
DA +L+ Y+K G + ++++VFNG+ E WN++I GYG +++F M
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS---GLDSDSHVGSLLVSMYSRC 253
+ G PD T G+L L I +GL L GL + + ++ M R
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGL--IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 254 KCMDSAYRVFCS--ISNPDLVTWSALISG---YSQCGEHEKVLLFFRKLIMERKKLDSIL 308
+D A RV D+ W +L+S + EKV +L E+ + + +L
Sbjct: 748 GQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE-NYVL 806
Query: 309 VATVLASIAQTANVR 323
++ + A + + +VR
Sbjct: 807 LSNLYAGLGKWEDVR 821
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 292/542 (53%), Gaps = 12/542 (2%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS--TRSVYLWNS 74
K+L +Q+HA ++ + + L Y +N ++ A F+++ R+ + WN+
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 75 MIRAFALSQR--FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLR---LVHGG 129
++ ++ S+ + + + L+ M D++ I+AC LG+L L+HG
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVG---LGLLENGILIHGL 134
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVG 189
A+ +GL D +LV Y++LG + A +VF+ I + VLW L+ GY +
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS-HKSGLDSDSHVGSLLVS 248
++F MR G D TL L+ + +G+ +HG+S +S +D ++ + ++
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 249 MYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
MY +C+ +D+A ++F + + ++V W+ LISG+++C + FR+++ E +
Sbjct: 255 MYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCT 314
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
+A +L S + ++R G +HGY+IR+G+E D ++ IDMY++CG + VF +MP
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
ERN+IS++S+I+ G++G EA F ++ + + P++ TF +LL AC H+G V EG +
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWK 434
Query: 429 IFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSC 488
F+ M ++ + EHY MV LLG AGE+ EA + ++P + GALLS C
Sbjct: 435 QFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
Query: 489 GNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSW 547
+LA +A+KL P ++ V+LSNIYA G W+ V +R KM G RK G S
Sbjct: 495 KEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSA 554
Query: 548 IE 549
E
Sbjct: 555 TE 556
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 287/574 (50%), Gaps = 49/574 (8%)
Query: 26 HACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRF 85
HA L T + F LV +Y+ ++ A VFD+MS V WNS+I ++A +
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 86 DNAVSLFRTMLGA-DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
A+ +F M +PDN T V+ CA + + +H AV S + + +
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL------ 198
LV Y+K G++ EAN VF+ ++ D+V WN++++GY ++ +++F M+
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 199 -----------------------------VGTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
G +P+ TL +L G A L G+ +H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 230 LS-------HKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS--NPDLVTWSALISG 280
+ K+G ++ V + L+ MY++CK +D+A +F S+S D+VTW+ +I G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 281 YSQCGEHEKVLLFFRKLIME--RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
YSQ G+ K L ++ E + + ++ ++ L + A A +R G +IH Y +R+
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 339 S-DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
+ + VS+ LIDMY+KCG + VF M +N +++ S+++G G+HG EA +FD
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAG 457
+ G D T +L AC H+G++++G E F RMK F + PEHY +V LLG AG
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 458 ELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSN 517
L A L + +P + A LSCC G EL E A+K+ + + +LSN
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 518 IYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIEG 550
+YA GRW DV +R M G++K PG SW+EG
Sbjct: 690 LYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 221/463 (47%), Gaps = 50/463 (10%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM--STRSVYLWN 73
CK++ + K +H LL + + L+ Y + ++ A + + S VY WN
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNL-TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 74 SMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS 133
S+IR++ + + + LF M PDNYTF V +AC + + H ++ +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
G + +ALV+ YS+ + +A +VF+ ++ D+V WNS+I Y V ++MF
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 194 SSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
S M G RPD TL +L A +G+ LH + S + + VG+ LV MY++
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
C MD A VF ++S D+V+W+A+++GYSQ G E + F K+ E+ K+D + +
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 313 LASIAQ---------------TANVRP----------GC----------EIHGYVIRHGL 337
++ AQ ++ ++P GC EIH Y I++ +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 338 E-------SDVKVSSALIDMYSKCGFLHFGICVF-RLMP-ERNIISYNSVISGLGLHGCA 388
+ + V + LIDMY+KC + +F L P ER+++++ +I G HG A
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 389 SEAFRMFDRILEKG--LAPDAATFSALLGACCHAGLVNEGREI 429
++A + + E+ P+A T S L AC + G++I
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 23 KQLHACLLKTHLSQDPFYATK-LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
KQ+HA L+ + P + + L+ +YA I+ A VFD M ++ W S++ + +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN--FDLGM-----LRLVHGGAVASG 134
+ A+ +F M K D T V+ AC+ + D GM ++ V G +
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP--- 613
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQMF 193
G + C LV + G ++ A R+ + EP V+W + +S ++G
Sbjct: 614 -GPEHYAC--LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAA 670
Query: 194 SSMRLVGTRPDG-YTL 208
+ + + DG YTL
Sbjct: 671 EKITELASNHDGSYTL 686
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 282/549 (51%), Gaps = 11/549 (2%)
Query: 8 LHSELSNVCK---SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATND-INSAYHVFDK 63
L++ L C S + Q HA ++K+ L D L+ LY + VFD
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 64 MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML 123
+ W SM+ + + A+ +F M+ + + +T + ++AC++ ++ +
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
R HG + G + S L Y +A RVF+ + EPD++ W +++S + +
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 184 AAWDVGMQMFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
++ + +F +M R G PDG T +L + L G+ +HG +G+ S+ V
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
S L+ MY +C + A +VF +S + V+WSAL+ GY Q GEHEK + FR+ ME K
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE--MEEK 360
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
D TVL + A A VR G EIHG +R G +V V SALID+Y K G +
Sbjct: 361 --DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASR 418
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
V+ M RN+I++N+++S L +G EA F+ +++KG+ PD +F A+L AC H G+
Sbjct: 419 VYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGM 478
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL 482
V+EGR F M + IK EHY M+ LLG AG EEA NL + D ++ G LL
Sbjct: 479 VDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Query: 483 SCCNSCGN-SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLR 540
C + + S +AE +A+++ + P + V+LSN+Y GR D N+R M G+
Sbjct: 539 GPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVA 598
Query: 541 KMPGLSWIE 549
K G SWI+
Sbjct: 599 KTVGQSWID 607
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 284 bits (727), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 274/533 (51%), Gaps = 9/533 (1%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q HA ++K D + T LV +Y + VF M R+ Y W++M+ +A
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 83 QRFDNAVSLFRTML-----GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
R + A+ +F L G+D +Y F V+ + A +G+ R +H + +GL
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSD---SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+ALV+ YSK ++EA ++F+ + + + W+++++GY + +++FS M
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G +P YT+ G+L +D L G+ LH K G + + LV MY++ C+
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
A + F + D+ W++LISGY Q ++E+ L+ +R++ + +A+VL + +
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
A + G ++HG+ I+HG +V + SAL MYSKCG L G VFR P ++++S+N+
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNA 494
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+ISGL +G EA +F+ +L +G+ PD TF ++ AC H G V G F M D+
Sbjct: 495 MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQI 554
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
+ + +HY MV LL AG+L+EA +S + LLS C + G EL
Sbjct: 555 GLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYA 614
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+KL +++ V LS IY GR DV+ + M G+ K G SWIE
Sbjct: 615 GEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 213/419 (50%), Gaps = 7/419 (1%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
++L+ + +H +++T S +A LV YA + A+ +F+ + + V WNS+I
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 77 RAFALSQRFDNA---VSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS 133
++ + ++ + LFR M DI P+ YT A + +A + + R H V
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
D ++LV Y K GLV + +VF + E + W++++SGY + +++F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 194 S---SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+ + G+ D Y +L +A + +G+ +H ++ K+GL + + LV+MY
Sbjct: 208 NLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
S+C+ ++ A ++F S + + +TWSA+++GYSQ GE + + F ++ K +
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
VL + + + G ++H ++++ G E + ++AL+DMY+K G L F + ER
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
++ + S+ISG + EA ++ R+ G+ P+ T +++L AC + G+++
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 205/404 (50%), Gaps = 21/404 (5%)
Query: 90 SLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAY 149
S F+T ++ P T + + +L R VHG + +G + LV+ Y
Sbjct: 4 STFQT----ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFY 59
Query: 150 SKLGLVHEANRVFNGIAEPDLVLWNSLISGY----GCSAAWDVGMQMFSSMRLVGTRPDG 205
+K G + +A+ +FN I D+V WNSLI+GY G S+++ V MQ+F MR P+
Sbjct: 60 AKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTV-MQLFREMRAQDILPNA 118
Query: 206 YTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCS 265
YTLAG+ + +G+ H L K D +V + LV MY + ++ +VF
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 266 ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK-LDSILVAT-VLASIAQTANVR 323
+ + TWS ++SGY+ G E+ + F + E+++ DS V T VL+S+A T V
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
G +IH I++GL V +S+AL+ MYSKC L+ +F +RN I+++++++G
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
+G + EA ++F R+ G+ P T +L AC + EG+++ F +K
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS-----FLLKLGF 353
Query: 444 EHYVY----MVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLS 483
E +++ +V + AG L +A L E D A+ +L+S
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQER-DVALWTSLIS 396
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 8/280 (2%)
Query: 13 SNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
S++C L KQLH+ LLK + F T LV +YA + A FD + R V LW
Sbjct: 333 SDICY-LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
S+I + + + A+ L+R M A I P++ T A V++AC+ L + + VHG +
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
G GL+ SAL + YSK G + + N VF D+V WN++ISG + D +++
Sbjct: 452 HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ-GLHGLSHKSGLDSDSHVGSLLVSMYS 251
F M G PD T ++ + + G + +S + GLD + +V + S
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLS 571
Query: 252 RCKCMDSAYRVFCSISNPD--LVTWSALISGYSQCGEHEK 289
R + A + F +N D L W L+S C H K
Sbjct: 572 RAGQLKEA-KEFIESANIDHGLCLWRILLSA---CKNHGK 607
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 278/530 (52%), Gaps = 5/530 (0%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q H+ ++K L+++ F LV +YA + A +F++M R WN++I ++ +
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
A LF+ M I D A ++AC L + VH +V GL D S
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
+L+ YSK G++ +A +VF+ + E +V N+LI+GY + + +F M G P
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNP 627
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSD-SHVGSLLVSMYSRCKCMDSAYRV 262
T A ++ P L +G HG K G S+ ++G L+ MY + M A +
Sbjct: 628 SEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 263 FCSISNPD-LVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
F +S+P +V W+ ++SG+SQ G +E+ L F++++ + D TVL + ++
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSS 747
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER-NIISYNSVIS 380
+R G IH + + D S+ LIDMY+KCG + VF M R N++S+NS+I+
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
G +G A +A ++FD + + + PD TF +L AC HAG V++GR+IF+ M ++ I+
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
Query: 441 ARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQK 500
AR +H MV LLG G L+EA + ++ D + +LL C G+ E A+K
Sbjct: 868 ARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEK 927
Query: 501 LFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
L + P +++ V+LSNIYA G W+ LR M G++K+PG SWI+
Sbjct: 928 LIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWID 977
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 199/407 (48%), Gaps = 3/407 (0%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
+HA +K L+ + + + LV +Y+ + +A VF+ + ++ WN+MIR +A +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
+ LF M + D++TF ++ CA + DL M H + L + +A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
LV Y+K G + +A ++F + + D V WN++I Y +F M L G D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 205 GYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC 264
G LA L L G+ +H LS K GLD D H GS L+ MYS+C + A +VF
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 265 SISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRP 324
S+ +V+ +ALI+GYSQ E V+L F++++ I AT++ + + ++
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNLEEAVVL-FQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 325 GCEIHGYVIRHGLESDVK-VSSALIDMYSKCGFLHFGICVF-RLMPERNIISYNSVISGL 382
G + HG + + G S+ + + +L+ MY + +F L ++I+ + ++SG
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+G EA + + + G+ PD ATF +L C + EGR I
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 200/407 (49%), Gaps = 35/407 (8%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q+H ++K L ++ + LV +YA + I+ A VF+ + + W + + +
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ AV +F M +PD+ F VI
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVI------------------------------- 268
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ Y +LG + +A +F ++ PD+V WN +ISG+G V ++ F +MR +
Sbjct: 269 ----NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
TL +L I + L +G +H + K GL S+ +VGS LVSMYS+C+ M++A +V
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F ++ + V W+A+I GY+ GE KV+ F + +D ++L++ A + ++
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G + H +I+ L ++ V +AL+DMY+KCG L +F M +R+ +++N++I
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
SEAF +F R+ G+ D A ++ L AC H + +G+++
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 183/383 (47%), Gaps = 5/383 (1%)
Query: 37 DPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTML 96
D ++ Y + A +F +MS+ V WN MI A+ F M
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 97 GADIKPDNYTFACVIRACA--DNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGL 154
+ +K T V+ A N DLG++ VH A+ GL + S+LVS YSK
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLV--VHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 155 VHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG 214
+ A +VF + E + V WN++I GY + M++F M+ G D +T LL
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 215 IADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTW 274
A L +G H + K L + VG+ LV MY++C ++ A ++F + + D VTW
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 275 SALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
+ +I Y Q + F+++ + D +A+ L + + G ++H ++
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRM 394
GL+ D+ S+LIDMYSKCG + VF +PE +++S N++I+G + EA +
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVL 616
Query: 395 FDRILEKGLAPDAATFSALLGAC 417
F +L +G+ P TF+ ++ AC
Sbjct: 617 FQEMLTRGVNPSEITFATIVEAC 639
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 177/395 (44%), Gaps = 36/395 (9%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K +H+ L + + +V LYA ++ A FD + + V WNSM+ ++
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSI 138
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ + F ++ I P+ +TF+ V+ CA ++ R +H + GL ++ C
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
ALV Y+K + +A RVF I +P+ V W L SGY + + + +F MR G R
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
PD +++ Y R + A +
Sbjct: 259 PDHLAFV-----------------------------------TVINTYIRLGKLKDARLL 283
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F +S+PD+V W+ +ISG+ + G + +F + K + +VL++I AN+
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G +H I+ GL S++ V S+L+ MYSKC + VF + E+N + +N++I G
Sbjct: 344 DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+G + + +F + G D TF++LL C
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 154/338 (45%), Gaps = 36/338 (10%)
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
++F S ++ P LA L IG+ +H S G+DS+ +G+ +V +Y
Sbjct: 57 KLFKSRKVFDEMPQRLALA-----------LRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
++C + A + F D+ W++++S YS G+ KVL F L + + +
Sbjct: 106 AKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
VL++ A+ NV G +IH +I+ GLE + AL+DMY+KC + VF + +
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
N + + + SG G EA +F+R+ ++G PD F ++ G + + R +F
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 431 QRMKDEFNIKARPEHYVYMVKLLGSAGE------LEEAYNLTQSLPEPVDKAILGALLSC 484
M + P+ + V + G +E +N+ +S + ++ LG++LS
Sbjct: 285 GEM-------SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST-RSTLGSVLSA 336
Query: 485 CNSCGNSELAETVAQKLFQNNPADNAFKVML-SNIYAG 521
N +L V + A K+ L SNIY G
Sbjct: 337 IGIVANLDLGLVVHAE---------AIKLGLASNIYVG 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 14 NVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRS-VYLW 72
+V SL + +H+ + D + L+ +YA D+ + VFD+M RS V W
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSW 802
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
NS+I +A + ++A+ +F +M + I PD TF V+ AC+ H G V+
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS-----------HAGKVS 851
Query: 133 SGLGL--------------DAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLI 177
G + D + C +V + G + EA+ +PD LW+SL+
Sbjct: 852 DGRKIFEMMIGQYGIEARVDHVAC--MVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
Query: 178 SGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
C D S+ +L+ P + LL I
Sbjct: 910 G--ACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNI 945
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 285/536 (53%), Gaps = 15/536 (2%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H LLK+ + + L+ +Y + AY VFD M R+V W++++ L+
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
++SLF M I P+ +TF+ ++AC L +HG + G + +
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISG-----YGCSAAWDVGMQMFSSMRL 198
+LV YSK G ++EA +VF I + L+ WN++I+G YG A GM ++++
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK- 205
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLD--SDSHVGSLLVSMYSRCKCM 256
RPD +TL LL + ++ G+ +HG +SG S + + LV +Y +C +
Sbjct: 206 --ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
SA + F I +++WS+LI GY+Q GE + + F++L ++DS +++++
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 317 AQTANVRPGCEIHGYVIR--HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
A A +R G ++ ++ GLE+ V ++++DMY KCG + F M +++IS
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+ VI+G G HG ++ R+F +L + PD + A+L AC H+G++ EG E+F ++
Sbjct: 382 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
+ IK R EHY +V LLG AG L+EA +L ++P + I LLS C G+ EL
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELG 501
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRD-KMTGGLRKMPGLSWIE 549
+ V + L + + + A VM+SN+Y G W++ N R+ GL+K G+SW+E
Sbjct: 502 KEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 280/520 (53%), Gaps = 4/520 (0%)
Query: 34 LSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFR 93
L D + + L+ +Y + A +FD++ + W+SM+ F + AV FR
Sbjct: 92 LGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFR 151
Query: 94 TM-LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKL 152
M + +D+ PD T ++ AC + + R VHG + G D ++L++ Y+K
Sbjct: 152 RMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKS 211
Query: 153 GLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
EA +F IAE D++ W+++I+ Y + A + +F+ M GT P+ T+ +L
Sbjct: 212 RAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVL 271
Query: 213 GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLV 272
A L G+ H L+ + GL+++ V + LV MY +C + AY VF I D+V
Sbjct: 272 QACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV 331
Query: 273 TWSALISGYSQCG-EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGY 331
+W ALISG++ G H + F L+ + D+IL+ VL S ++ + H Y
Sbjct: 332 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391
Query: 332 VIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEA 391
VI++G +S+ + ++L+++YS+CG L VF + ++ + + S+I+G G+HG ++A
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKA 451
Query: 392 FRMFDRILEKG-LAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMV 450
F+ +++ + P+ TF ++L AC HAGL++EG IF+ M +++ + EHY +V
Sbjct: 452 LETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLV 511
Query: 451 KLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNA 510
LLG G+L+ A +T+ +P ILG LL C N E+AETVA+KLF+
Sbjct: 512 DLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAG 571
Query: 511 FKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ +++SN+Y G W++V+ LR+ + G++K S IE
Sbjct: 572 YYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIE 611
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 199/374 (53%), Gaps = 3/374 (0%)
Query: 57 AYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD 116
A +F +M+ RS+Y WN+++++ + ++++ + F M + KPDN+T ++AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 117 NFDLGMLRLVHGGAVAS-GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNS 175
++ ++HG LG D S+L+ Y K G + EA R+F+ + +PD+V W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 176 LISGYGCSAAWDVGMQMFSSMRLVG-TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS 234
++SG+ + + ++ F M + PD TL L+ S +G+ +HG +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 235 GLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFF 294
G +D + + L++ Y++ + A +F I+ D+++WS +I+ Y Q G + LL F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 295 RKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKC 354
++ + + + V VL + A ++ G + H IR GLE++VKVS+AL+DMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 355 GFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFD-RILEKGLAPDAATFSAL 413
VF +P ++++S+ ++ISG L+G A + F +LE PDA +
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 414 LGACCHAGLVNEGR 427
LG+C G + + +
Sbjct: 373 LGSCSELGFLEQAK 386
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 186/360 (51%), Gaps = 11/360 (3%)
Query: 157 EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA 216
+A ++F + + L WN+L+ W+ + FS M +PD +TL L
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 217 DPSLLCIGQGLHGLSHKS-GLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWS 275
+ + G+ +HG K L SD +VGS L+ MY +C M A R+F + PD+VTWS
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 276 ALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
+++SG+ + G + + FFR+++M D + + T++++ + +N R G +HG+VIR
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRM 394
G +D+ + ++L++ Y+K + +F+++ E+++IS+++VI+ +G A+EA +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 395 FDRILEKGLAPDAATFSALLGACCHAGLVNEGR---EIFQRMKDEFNIKARPEHYVYMVK 451
F+ +++ G P+ AT +L AC A + +GR E+ R E +K +V
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS----TALVD 307
Query: 452 LLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA-ETVAQKLFQNNPADNA 510
+ EEAY + +P D AL+S G + + E + L +NN +A
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 168/347 (48%), Gaps = 3/347 (0%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
+H +++ S D L+ YA + A ++F ++ + V W+++I + +
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
A+ +F M+ +P+ T CV++ACA DL R H A+ GL + +A
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV-GTRP 203
LV Y K EA VF+ I D+V W +LISG+ + ++ FS M L TRP
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
D + +LG ++ L + H K G DS+ +G+ LV +YSRC + +A +VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 264 CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANV 322
I+ D V W++LI+GY G+ K L F ++ + K + + ++L++ + +
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 323 RPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
G I ++ + L +++ + L+D+ + G L I + + MP
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L +AK H+ ++K +PF LV LY+ + +A VF+ ++ + +W S+I
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 79 FALSQRFDNAVSLFRTML-GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
+ + + A+ F M+ +++KP+ TF ++ AC+ H G + GL
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS-----------HAGLIHEGL 488
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 277/534 (51%), Gaps = 3/534 (0%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL +Q+H LK L + L+ +Y A VFD MS R + WNS+I
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFD-LGMLRLVHGGAVASGLG 136
A + AV LF +L +KPD YT V++A + + L + + VH A+
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
D+ +AL+ AYS+ + EA +F DLV WN++++GY S +++F+ M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G R D +TLA + + G+ +H + KSG D D V S ++ MY +C M
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
+A F SI PD V W+ +ISG + GE E+ F ++ + D +AT+ +
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
+ + G +IH ++ +D V ++L+DMY+KCG + C+F+ + NI ++N
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+++ GL HG E ++F ++ G+ PD TF +L AC H+GLV+E + + M +
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
+ IK EHY + LG AG +++A NL +S+ ++ LL+ C G++E +
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
VA KL + P D++ V+LSN+YA +WD++K R M G ++K PG SWIE
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIE 862
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 197/409 (48%), Gaps = 3/409 (0%)
Query: 62 DKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLG 121
D S + N + + S ++ + F M+ +D++ D TF ++ L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 122 MLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG 181
+ + VH A+ GL L ++L++ Y KL A VF+ ++E DL+ WNS+I+G
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 182 CSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD-PSLLCIGQGLHGLSHKSGLDSDS 240
+ + +F + G +PD YT+ +L + P L + + +H + K SDS
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
V + L+ YSR +CM A +F N DLV W+A+++GY+Q + K L F + +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
++ D +ATV + + G ++H Y I+ G + D+ VSS ++DMY KCG +
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 361 ICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
F +P + +++ ++ISG +G AF +F ++ G+ PD T + L A
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
+ +GR+I + N P +V + G +++AY L + +
Sbjct: 632 TALEQGRQIHANAL-KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 188/393 (47%), Gaps = 9/393 (2%)
Query: 13 SNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
S++ + L +KQ+H +K + D F +T L+ Y+ + A +F++ + V W
Sbjct: 427 SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLV-AW 485
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N+M+ + S + LF M + D++T A V + C F + + VH A+
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
SG LD S ++ Y K G + A F+ I PD V W ++ISG + + +
Sbjct: 546 SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHV 605
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
FS MRL+G PD +T+A L + + L G+ +H + K +D VG+ LV MY++
Sbjct: 606 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
C +D AY +F I ++ W+A++ G +Q GE ++ L F+++ K D + V
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 313 LASIAQTANVRPGCE----IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
L++ + + V + +HG +G++ +++ S L D + G + + M
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 369 -ERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
E + Y ++++ + G R+ ++LE
Sbjct: 783 MEASASMYRTLLAACRVQGDTETGKRVATKLLE 815
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 182/403 (45%), Gaps = 37/403 (9%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L+ K HA +L + + F L+ +Y+ + A VFDKM R + WNS++ A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 79 FALS-----QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS 133
+A S + A LFR + + T + +++ C + + HG A
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
GL D ALV+ Y K G V E +F + D+VLWN ++ Y + + +
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
S+ G P+ TL LL I SG DSD+ + S
Sbjct: 235 SAFHSSGLNPNEITLR-LLARI------------------SGDDSDAG------QVKSFA 269
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
D++ S +++ + +S Y G++ +L F ++ + D + +L
Sbjct: 270 NGNDAS-------SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
A+ + ++ G ++H ++ GL+ + VS++LI+MY K F VF M ER++I
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
S+NSVI+G+ +G EA +F ++L GL PD T +++L A
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 13 SNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
S+ +L + +Q+HA LK + + DPF T LV +YA I+ AY +F ++ ++ W
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLG----MLRLVHG 128
N+M+ A + LF+ M IKPD TF V+ AC+ + + +R +HG
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWD 187
G+ + S L A + GLV +A + ++ E ++ +L++ C D
Sbjct: 748 DY---GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLA--ACRVQGD 802
Query: 188 VGMQMFSSMRLVGTRP 203
+ +L+ P
Sbjct: 803 TETGKRVATKLLELEP 818
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 111 IRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDL 170
+R + DL + + H + + + L+S YSK G + A RVF+ + + DL
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 171 VLWNSLISGYGCSAAWDV-----GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
V WNS+++ Y S+ V +F +R TL+ +L + +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
HG + K GLD D V LV++Y + + +F + D+V W+ ++ Y + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 286 EHEKVL 291
E+ +
Sbjct: 226 FKEEAI 231
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 347 LIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHG-CASE----AFRMFDRILEK 401
LI MYSKCG L + VF MP+R+++S+NS+++ C E AF +F + +
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 402 GLAPDAATFSALLGACCHAGLV 423
+ T S +L C H+G V
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYV 161
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 278/533 (52%), Gaps = 6/533 (1%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q+H ++K + + + LV +YA + A+ F ++S + WN++I F
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 83 QRFDNAVSLFRTM-LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ A L M + A + D TFA ++ D +L+ VH + GL +
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 240
Query: 142 CSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
C+A++S+Y+ G V +A RVF+G+ DL+ WNS+I+G+ + ++F M+
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR--CKCMDS 258
D YT GLL + G+ LHG+ K GL+ + + L+SMY + M+
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A +F S+ + DL++W+++I+G++Q G E + FF L K+D + +L S +
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG-ICVFRLMPERNIISYNS 377
A ++ G +IH + G S+ V S+LI MYSKCG + C ++ + + +++N+
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+I G HG + +F ++ + + D TF+A+L AC H GL+ EG E+ M+ +
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVY 540
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
I+ R EHY V LLG AG + +A L +S+P D +L L C +CG E+A V
Sbjct: 541 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 600
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A L + P D+ V LS++Y+ +W++ +++ M G++K+PG SWIE
Sbjct: 601 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIE 653
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 199/404 (49%), Gaps = 18/404 (4%)
Query: 37 DPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTML 96
D + + +++ Y + A +FD+M R WN+MI + + ++A LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 97 GADIKPDNYTFACVIR--ACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGL 154
+ D Y+F+ +++ A FDLG VHG + G + S+LV Y+K
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLG--EQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 155 VHEANRVFNGIAEPDLVLWNSLISGYGC-----SAAWDVG-MQMFSSMRLVGTRPDGYTL 208
V +A F I+EP+ V WN+LI+G+ +A W +G M+M +++ + D T
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM-----DAGTF 206
Query: 209 AGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI-S 267
A LL + DP + + +H K GL + + + ++S Y+ C + A RVF +
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
+ DL++W+++I+G+S+ E F ++ + D +L++ + + G
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 328 IHGYVIRHGLESDVKVSSALIDMYSK--CGFLHFGICVFRLMPERNIISYNSVISGLGLH 385
+HG VI+ GLE ++ALI MY + G + + +F + +++IS+NS+I+G
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
G + +A + F + + D FSALL +C + G++I
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 180/357 (50%), Gaps = 17/357 (4%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGC 182
L L H A+ G D + ++ +Y K G + AN +F+ + + D V WN++ISGY
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ +F+ M+ G+ DGY+ + LL GIA +G+ +HGL K G + + +V
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
GS LV MY++C+ ++ A+ F IS P+ V+W+ALI+G+ Q + + F+ +ME K
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTA--FWLLGLMEMK 196
Query: 303 ---KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHF 359
+D+ A +L + ++H V++ GL+ ++ + +A+I Y+ CG +
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 360 GICVFR-LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
VF L +++IS+NS+I+G H AF +F ++ + D T++ LL AC
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 419 HAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGS------AGELEEAYNLTQSL 469
E +IF + IK E L S G +E+A +L +SL
Sbjct: 317 -----GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 259/481 (53%), Gaps = 3/481 (0%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
WN +R A F ++SL+R+ML + PD ++F ++++CA + +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVF--NGIAEPDLVLWNSLISGYGCSAAWDVG 189
G + +AL+S Y K GLV +A +VF N + V +N+LISGY ++
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
MF M+ G D T+ GL+ P L +G+ LHG K GLDS+ V + ++M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 250 YSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILV 309
Y +C +++ R+F + L+TW+A+ISGYSQ G VL + ++ D +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 310 ATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE 369
+VL+S A + G E+ V +G +V VS+A I MY++CG L VF +MP
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 370 RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
++++S+ ++I G+HG +FD ++++G+ PD A F +L AC H+GL ++G E+
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 430 FQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCG 489
F+ MK E+ ++ PEHY +V LLG AG L+EA +S+P D A+ GALL C
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 490 NSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWI 548
N ++AE K+ + P + + V++SNIY+ + + +R M RK PG S++
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 549 E 549
E
Sbjct: 501 E 501
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 194/436 (44%), Gaps = 11/436 (2%)
Query: 16 CKSL---LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDK--MSTRSVY 70
C SL + +QLH + K +PF T L+ +Y + A VF++ S++
Sbjct: 63 CASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSV 122
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
+N++I + + + +A +FR M + D+ T ++ C L + R +HG
Sbjct: 123 CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA-AWDVG 189
V GL + ++ ++ Y K G V R+F+ + L+ WN++ISGY + A+DV
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV- 241
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
++++ M+ G PD +TL +L A IG + L +G + V + +SM
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 250 YSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILV 309
Y+RC + A VF + LV+W+A+I Y G E L+ F +I + D +
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 310 ATVLASIAQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
VL++ + + G E+ + R + LE + S L+D+ + G L + MP
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Query: 369 -ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
E + + +++ +H A F +++E P+ + L+ EG
Sbjct: 422 VEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGI 479
Query: 428 EIFQRMKDEFNIKARP 443
+ M E + +P
Sbjct: 480 WRIRVMMRERAFRKKP 495
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 14/295 (4%)
Query: 12 LSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL 71
L V + L + LH +K L + + +Y + + +FD+M + +
Sbjct: 165 LCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLIT 224
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH--GG 129
WN++I ++ + + + L+ M + + PD +T V+ +CA LG ++ H G
Sbjct: 225 WNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA---HLGAKKIGHEVGK 281
Query: 130 AVAS-GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDV 188
V S G + +A +S Y++ G + +A VF+ + LV W ++I YG ++
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL-HGLSHKSGLDSDSHVGSLLV 247
G+ +F M G RPDG +L + L G L + + L+ S LV
Sbjct: 342 GLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 401
Query: 248 SMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKV---LLFFRKLI 298
+ R +D A S+ PD W AL+ C H+ V L F K+I
Sbjct: 402 DLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA---CKIHKNVDMAELAFAKVI 453
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 286/570 (50%), Gaps = 37/570 (6%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
++ L Q+HA + + + KLV Y+A N N A + + WN +I
Sbjct: 57 RAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLI 116
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
++A ++ F+ ++ ++ M+ I+PD +T+ V++AC + D+ R+VHG S
Sbjct: 117 ASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYK 176
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
C+AL+S Y + + A R+F+ + E D V WN++I+ Y W ++F M
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Query: 197 RLVGTRPDGYT-------------LAGLLGGIA---------DPSLLCI----------- 223
G T G LG I+ DP + I
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAI 296
Query: 224 --GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY 281
G+ +HGL+ S D +V + L++MYS+CK + A VF L TW+++ISGY
Sbjct: 297 RLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGY 356
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD- 340
+Q + E+ R++++ + +SI +A++L A+ AN++ G E H Y++R D
Sbjct: 357 AQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDY 416
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+ ++L+D+Y+K G + V LM +R+ ++Y S+I G G G A +F +
Sbjct: 417 TMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTR 476
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
G+ PD T A+L AC H+ LV+EG +F +M+ E+ I+ +H+ MV L G AG L
Sbjct: 477 SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLA 536
Query: 461 EAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYA 520
+A ++ ++P A LL+ C+ GN+++ + A+KL + P + + V+++N+YA
Sbjct: 537 KAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYA 596
Query: 521 GDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
G W + +R M G++K PG +WI+
Sbjct: 597 AAGSWSKLAEVRTIMRDLGVKKDPGCAWID 626
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 278/534 (52%), Gaps = 11/534 (2%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
R Q+H ++K L + + L+ LY ++ A +FDK +SV WNSMI +A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
+ A+ +F +M ++ +FA VI+ CA+ +L +H V G D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
+AL+ AYSK + +A R+F I ++V W ++ISG+ + + + +FS M+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 200 GTRPDGYTLAGLLGG--IADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G RP+ +T + +L + PS +H K+ + S VG+ L+ Y + ++
Sbjct: 392 GVRPNEFTYSVILTALPVISPS------EVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
A +VF I + D+V WSA+++GY+Q GE E + F +L K + +++L A
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 318 QT-ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
T A++ G + HG+ I+ L+S + VSSAL+ MY+K G + VF+ E++++S+N
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
S+ISG HG A +A +F + ++ + D TF + AC HAGLV EG + F M +
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
I EH MV L AG+LE+A + +++P P I +L+ C +EL
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A+K+ P D+A V+LSN+YA G W + +R M ++K PG SWIE
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 196/406 (48%), Gaps = 6/406 (1%)
Query: 13 SNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
+ +C L +QLH +K D T LV Y ++ VFD+M R+V W
Sbjct: 104 ATLCDELF-GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
++I +A + D ++LF M +P+++TFA + A+ G VH V
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
+GL ++L++ Y K G V +A +F+ +V WNS+ISGY + + M
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
F SMRL R + A ++ A+ L + LH K G D ++ + L+ YS+
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 253 CKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
C M A R+F I ++V+W+A+ISG+ Q E+ + F ++ + + + +
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERN 371
+L ++ V E+H V++ E V +AL+D Y K G + VF + +++
Sbjct: 403 ILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
I++++++++G G A +MF + + G+ P+ TFS++L C
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 188/380 (49%), Gaps = 11/380 (2%)
Query: 45 VRLY----AATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADI 100
VR+Y +++ + +A+++FDK R + S++ F+ R A LF + +
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 101 KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANR 160
+ D F+ V++ A D R +H + G D ++LV Y K + +
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
VF+ + E ++V W +LISGY ++ D + +F M+ GT+P+ +T A LG +A+ +
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
G +H + K+GLD V + L+++Y +C + A +F +VTW+++ISG
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
Y+ G + L F + + +L A+V+ A +R ++H V+++G D
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPE----RNIISYNSVISGLGLHGCASEAFRMFD 396
+ +AL+ YSKC + + RL E N++S+ ++ISG + EA +F
Sbjct: 330 QNIRTALMVAYSKCTAM---LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 397 RILEKGLAPDAATFSALLGA 416
+ KG+ P+ T+S +L A
Sbjct: 387 EMKRKGVRPNEFTYSVILTA 406
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 6/277 (2%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
++ ++HA ++KT+ + T L+ Y + A VF + + + W++M+
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC-ADNFDLGMLRLVHGGAVASGLGL 137
+A + + A+ +F + IKP+ +TF+ ++ C A N +G + HG A+ S L
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
SAL++ Y+K G + A VF E DLV WNS+ISGY + +F M+
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS-GLDSDSHVGSLLVSMYSRCKCM 256
+ DG T G+ L+ G+ + + + S +V +YSR +
Sbjct: 589 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 257 DSAYRVFCSISNPDLVT-WSALISGYSQCGEHEKVLL 292
+ A +V ++ NP T W +++ C H+K L
Sbjct: 649 EKAMKVIENMPNPAGSTIWRTILAA---CRVHKKTEL 682
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 4/288 (1%)
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
A+G+ I C VS+ S+L + A+ +F+ D + SL+ G+ +
Sbjct: 24 ANGVAQVRIYCFGTVSS-SRL---YNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKR 79
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
+F ++ +G D + +L A G+ LH K G D VG+ LV Y
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
+ +VF + ++VTW+ LISGY++ +++VL F ++ E + +S A
Sbjct: 140 KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERN 371
L +A+ G ++H V+++GL+ + VS++LI++Y KCG + +F ++
Sbjct: 200 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
++++NS+ISG +G EA MF + + ++F++++ C +
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCG---EHEKVLLFFRKLIMERKKLDSILVATVLA 314
+A+ +F D ++ +L+ G+S+ G E +++ L +L ME +D + ++VL
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGME---MDCSIFSSVLK 101
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
A + G ++H I+ G DV V ++L+D Y K G VF M ERN+++
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+ ++ISG + E +F R+ +G P++ TF+A LG G+ G ++
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 6 QWLHSELSNVCK----SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVF 61
++ S + NVC S+ + KQ H +K+ L ++ L+ +YA +I SA VF
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 62 DKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLG 121
+ + + WNSMI +A + A+ +F+ M +K D TF V AC
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC------- 606
Query: 122 MLRLVHGGAVASGLGLDAICC------------SALVSAYSKLGLVHEANRVFNGIAEP- 168
H G V G I S +V YS+ G + +A +V + P
Sbjct: 607 ----THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 169 DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
+W ++++ C + ++ +++ +P+
Sbjct: 663 GSTIWRTILA--ACRVHKKTELGRLAAEKIIAMKPE 696
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 290/540 (53%), Gaps = 13/540 (2%)
Query: 19 LLRAKQLHACLLKTHLSQDPF-YATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
L + +++H ++ T L LV +YA I A VF M+ + WNSMI
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ F AV +++M DI P ++T + +CA + + +HG ++ G+ L
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA-AWDVGMQMFSSM 196
+ +AL++ Y++ G ++E ++F+ + E D V WNS+I S + + F +
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+ G + + T + +L ++ S +G+ +HGL+ K+ + ++ + L++ Y +C M
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 257 DSAYRVFCSISNP-DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
D ++F ++ D VTW+++ISGY K L ++ ++LDS + ATVL++
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
A A + G E+H +R LESDV V SAL+DMYSKCG L + + F MP RN S+
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 376 NSVISGLGLHGCASEAFRMFDRI-LEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
NS+ISG HG EA ++F+ + L+ PD TF +L AC HAGL+ EG + F+ M
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLP-EP---VDKAILGALLSCCNSCG- 489
D + + R EH+ M +LG AGEL++ + + +P +P + + +LGA CC + G
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA---CCRANGR 805
Query: 490 NSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWI 548
+EL + A+ LFQ P + V+L N+YA GRW+D+ R KM ++K G SW+
Sbjct: 806 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 231/477 (48%), Gaps = 22/477 (4%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
A+ H+ L K L +D + L+ Y T D SA VFD+M R+ W ++ ++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML--RLVHGGAVASGLGLDA 139
+ A+ R M+ I + Y F V+RAC + +G+L R +HG +DA
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 140 ICCSALVSAYSK-LGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ + L+S Y K +G V A F I + V WNS+IS Y + ++FSSM+
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 199 VGTRPDGYTLAGLLG---GIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
G+RP YT L+ + +P + + Q + + KSGL +D VGS LVS +++
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI-QKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 256 MDSAYRVFCSISNPDLVTWSALISGY--SQCGEH-EKVLLFFRKLIMERKKLDSILVATV 312
+ A +VF + + VT + L+ G + GE K+ + +I + IL+++
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318
Query: 313 LA-SIAQTANVRPGCEIHGYVIRHGL-ESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
S+A+ ++ G E+HG+VI GL + V + + L++MY+KCG + VF M ++
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
+ +S+NS+I+GL +GC EA + + + P + T + L +C G++I
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 431 Q---RMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVD---KAILGAL 481
++ + N+ ++ L G L E + S+PE +I+GAL
Sbjct: 439 GESLKLGIDLNVSVSNA----LMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 208/418 (49%), Gaps = 15/418 (3%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q+ + K+ L D F + LV +A + ++ A VF++M TR+ N ++
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 83 QRFDNAVSLFRTMLGA-DIKPDNYTF---ACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
+ + A LF M D+ P++Y + + A+ L R VHG + +GL +D
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VD 346
Query: 139 AICC--SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ + LV+ Y+K G + +A RVF + + D V WNS+I+G + + ++ + SM
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
R P +TL L A +GQ +HG S K G+D + V + L+++Y+ +
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEH--EKVLLFFRKLIMER--KKLDSILVATV 312
+ ++F S+ D V+W+++I ++ E V+ F L +R +KL+ I ++V
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF---LNAQRAGQKLNRITFSSV 523
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE-RN 371
L++++ + G +IHG +++ + + +ALI Y KCG + +F M E R+
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+++NS+ISG + ++A + +L+ G D+ ++ +L A + G E+
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 9/282 (3%)
Query: 121 GMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY 180
G R H + L D C+ L++AY + G A +VF+ + + V W ++SGY
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI--GQGLHGLSHKSGLDS 238
+ + M G + Y +L + + I G+ +HGL K
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 239 DSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDL---VTWSALISGYSQCGEHEKVLLFFR 295
D+ V ++L+SMY KC+ S C+ + ++ V+W+++IS YSQ G+ F
Sbjct: 138 DAVVSNVLISMY--WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFS 195
Query: 296 KLIMERKKLDSILVATVLASIAQ--TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSK 353
+ + + +++ + +VR +I + + GL +D+ V S L+ ++K
Sbjct: 196 SMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255
Query: 354 CGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF 395
G L + VF M RN ++ N ++ GL EA ++F
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L R ++HAC ++ L D + LV +Y+ ++ A F+ M R+ Y WNSMI
Sbjct: 634 TLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMIS 693
Query: 78 AFALSQRFDNAVSLFRTM-LGADIKPDNYTFACVIRACADNFDLGMLR--LVHGGAVASG 134
+A + + A+ LF TM L PD+ TF V+ AC+ G+L H +++
Sbjct: 694 GYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS---HAGLLEEGFKHFESMSDS 750
Query: 135 LGL----DAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLI 177
GL + C A V LG E +++ + I +P++++W +++
Sbjct: 751 YGLAPRIEHFSCMADV-----LGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 279/533 (52%), Gaps = 18/533 (3%)
Query: 29 LLKT-HLSQDPFYATKLVRLYA-ATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFD 86
L+KT H D L+ ++ N +AY VFDKMS +V W MI
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 87 NAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALV 146
A+ F M+ + + D +T + V ACA+ +L + + +H A+ SGL D C +LV
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLV 309
Query: 147 SAYSKL---GLVHEANRVFNGIAEPDLVLWNSLISGY--GCSAAWDVGMQMFSSMRLVG- 200
Y+K G V + +VF+ + + ++ W +LI+GY C+ A + + +FS M G
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATE-AINLFSEMITQGH 368
Query: 201 TRPDGYTLAGLL---GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
P+ +T + G ++DP +G+ + G + K GL S+S V + ++SM+ + M+
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPR---VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
A R F S+S +LV+++ + G + E+ ++ + + A++L+ +A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
++R G +IH V++ GL + V +ALI MYSKCG + VF M RN+IS+ S
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+I+G HG A F++++E+G+ P+ T+ A+L AC H GLV+EG F M ++
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
IK + EHY MV LL AG L +A+ ++P D + L C N+EL +
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A+K+ + +P + A + LSNIYA G+W++ +R KM L K G SWIE
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIE 718
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 214/438 (48%), Gaps = 18/438 (4%)
Query: 12 LSNVCKSLLRA------KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS 65
S++ KS +RA K +HA L++ + D L+ LY+ + D A VF+ M
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 66 ---TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGM 122
R V W++M+ + + R +A+ +F L + P++Y + VIRAC+++ +G+
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 123 LRLVHGGAVASGLGLDAIC--CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY 180
R+ G + +G +C CS + A +VF+ ++E ++V W +I+
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
++ F M L G D +TL+ + A+ L +G+ LH + +SGL D
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD- 303
Query: 241 HVGSLLVSMYSRCKC---MDSAYRVFCSISNPDLVTWSALISGY-SQCGEHEKVLLFFRK 296
V LV MY++C +D +VF + + +++W+ALI+GY C + + F +
Sbjct: 304 -VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 297 LIME-RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
+I + + + ++ + ++ R G ++ G + GL S+ V++++I M+ K
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 356 FLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLG 415
+ F + E+N++SYN+ + G + +AF++ I E+ L A TF++LL
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 416 ACCHAGLVNEGREIFQRM 433
+ G + +G +I ++
Sbjct: 483 GVANVGSIRKGEQIHSQV 500
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 205/397 (51%), Gaps = 18/397 (4%)
Query: 88 AVSLFRTMLGADIKP-DNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALV 146
AVS M I+P D+ TF+ ++++C D + +LVH + + D++ ++L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 147 SAYSKLGLVHEANRVFNGI---AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
S YSK G +A VF + + D+V W+++++ YG + +++F +G P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG-LDSDSHVGSLLVSMYSRCK-CMDSAYR 261
+ Y ++ ++ + +G+ G K+G +SD VG L+ M+ + + ++AY+
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
VF +S ++VTW+ +I+ Q G + + FF +++ + D +++V ++ A+ N
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKC---GFLHFGICVFRLMPERNIISYNSV 378
+ G ++H + IR GL DV+ S L+DMY+KC G + VF M + +++S+ ++
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 379 ISGLGLHGC--ASEAFRMFDRILEKG-LAPDAATFSALLGACCHAGLVNEGREIF-QRMK 434
I+G + C A+EA +F ++ +G + P+ TFS+ AC + G+++ Q K
Sbjct: 343 ITGY-MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE 471
+ + V + + + +E+A +SL E
Sbjct: 402 RGLASNSSVANSV--ISMFVKSDRMEDAQRAFESLSE 436
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 94/202 (46%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
KQ+ K L+ + A ++ ++ ++ + A F+ +S +++ +N+ + +
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
F+ A L + ++ +TFA ++ A+ + +H V GL + C
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+AL+S YSK G + A+RVFN + +++ W S+I+G+ ++ F+ M G +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 203 PDGYTLAGLLGGIADPSLLCIG 224
P+ T +L + L+ G
Sbjct: 573 PNEVTYVAILSACSHVGLVSEG 594
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
S+ + +Q+H+ ++K LS + L+ +Y+ I++A VF+ M R+V W SMI
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA 115
FA + F M+ +KP+ T+ ++ AC+
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 278/548 (50%), Gaps = 23/548 (4%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
QLHA LK+ + D T + +YA +++ A +FD + +N+MI ++ +
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 361
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
A+ LF ++ + + D + + V RACA L ++G A+ S L LD +
Sbjct: 362 HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN 421
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
A + Y K + EA RVF+ + D V WN++I+ + + + +F SM P
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
D +T +L SL G +H KSG+ S+S VG L+ MYS+C ++ A ++
Sbjct: 482 DEFTFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 264 C----------------SISNPDL----VTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ N L V+W+++ISGY + E + F +++
Sbjct: 541 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D ATVL + A A+ G +IH VI+ L+SDV + S L+DMYSKCG LH +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 364 FRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
F R+ +++N++I G HG EA ++F+R++ + + P+ TF ++L AC H GL+
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 424 NEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLS 483
++G E F MK ++ + + HY MV +LG +G+++ A L + +P D I LL
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 484 CCN-SCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRK 541
C N E+AE L + +P D++ +LSN+YA G W+ V +LR M G L+K
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840
Query: 542 MPGLSWIE 549
PG SW+E
Sbjct: 841 EPGCSWVE 848
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 200/438 (45%), Gaps = 32/438 (7%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
KQ HA ++ + F L+++Y + D SA VFDKM R V WN MI ++ S
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 83 QRFDNAVSLFRTMLGAD-------------------------------IKPDNYTFACVI 111
A S F M D I+ D TFA ++
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 112 RACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLV 171
+ C+ D + +HG V G D + SAL+ Y+K E+ RVF GI E + V
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 172 LWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS 231
W+++I+G + + ++ F M+ V A +L A S L +G LH +
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 232 HKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVL 291
KS +D V + + MY++C M A +F + N + +++A+I+GYSQ K L
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 292 LFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMY 351
L F +L+ D I ++ V + A + G +I+G I+ L DV V++A IDMY
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 352 SKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFS 411
KC L VF M R+ +S+N++I+ +G E +F +L + PD TF
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 412 ALLGACCHAGLVNEGREI 429
++L AC G + G EI
Sbjct: 488 SILKACT-GGSLGYGMEI 504
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 212/463 (45%), Gaps = 30/463 (6%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H +++ D A+ L+ +YA + VF + ++ W+++I +
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
A+ F+ M + +A V+R+CA +L + +H A+ S D I +
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
A + Y+K + +A +F+ + +N++I+GY + +F + G
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
D +L+G+ A L G ++GL+ KS L D V + + MY +C+ + A+RVF
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 264 CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVR 323
+ D V+W+A+I+ + Q G+ + L F ++ R + D ++L + ++
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLG 499
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF-RLMPERNI---------- 372
G EIH +++ G+ S+ V +LIDMYSKCG + + R N+
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 373 ---------ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
+S+NS+ISG + + +A +F R++E G+ PD T++ +L C +
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASA 619
Query: 424 NEGREIFQRMKDEFNIKARPEHYVY----MVKLLGSAGELEEA 462
G++I ++ IK + VY +V + G+L ++
Sbjct: 620 GLGKQIHAQV-----IKKELQSDVYICSTLVDMYSKCGDLHDS 657
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 163/337 (48%), Gaps = 6/337 (1%)
Query: 95 MLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL-DAICCSALVSAYSKLG 153
M+ + +P + C+++ ++ D V V + L D + + +++ YSK
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDF-----VSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 154 LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLG 213
+ +AN FN + D+V WNS++SGY + +++F M G DG T A +L
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 214 GIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVT 273
+ +G +HG+ + G D+D S L+ MY++ K + RVF I + V+
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
WSA+I+G Q L FF+++ + + A+VL S A + +R G ++H + +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFR 393
+ +D V +A +DMY+KC + +F N SYN++I+G +A
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
+F R++ GL D + S + AC ++EG +I+
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 31/233 (13%)
Query: 216 ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWS 275
A L +G+ H SG + V + L+ +Y+ + SA VF + D+V+W+
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 118
Query: 276 ALISGYS-------------------------------QCGEHEKVLLFFRKLIMERKKL 304
+I+GYS Q GE K + F + E +
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
D A +L + + G +IHG V+R G ++DV +SAL+DMY+K + VF
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+ +PE+N +S++++I+G + S A + F + + + ++++L +C
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 281/548 (51%), Gaps = 15/548 (2%)
Query: 11 ELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV- 69
EL + C SL KQ+ L+ L +D K+V + D S Y S RSV
Sbjct: 11 ELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFAS-YSSVILHSIRSVL 69
Query: 70 --YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
+ +N+++ ++A+ + + ++T + PD +TF V +AC + + +H
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWD 187
G G D ++LV Y G A +VF + D+V W +I+G+ + +
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
+ FS M + P+ T +L L +G+G+HGL K G+ L+
Sbjct: 190 EALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 248 SMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK---KL 304
MY +C+ + A RVF + D V+W+++ISG C ++ + F +M+ K
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFS--LMQTSSGIKP 304
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
D ++ +VL++ A V G +H Y++ G++ D + +A++DMY+KCG++ + +F
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
+ +N+ ++N+++ GL +HG E+ R F+ +++ G P+ TF A L ACCH GLV+
Sbjct: 365 NGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 425 EGREIFQRMKD-EFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLS 483
EGR F +MK E+N+ + EHY M+ LL AG L+EA L +++P D I GA+LS
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILS 484
Query: 484 CCNSCGN-SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRK 541
C + G EL + + D+ V+LSNI+A + RWDDV +R M G+ K
Sbjct: 485 ACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISK 544
Query: 542 MPGLSWIE 549
+PG S+IE
Sbjct: 545 VPGSSYIE 552
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 269/531 (50%), Gaps = 4/531 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+ +HA L+K+ D F T V ++ N ++ A VF++M R WN+M+ F S
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
D A SLFR M +I PD+ T +I++ + L +L +H + G+ +
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPD--LVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
+ +S Y K G + A VF I D +V WNS+ Y ++ M
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
+PD T L +P L G+ +H + G D D + +SMYS+ + SA
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+F +++ V+W+ +ISGY++ G+ ++ L F +I +K D + + ++++ +
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 321 NVRPGCEIHGYVIRHGLESD-VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
++ G I +G + D V + +ALIDMYSKCG +H +F PE+ ++++ ++I
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
+G L+G EA ++F ++++ P+ TF A+L AC H+G + +G E F MK +NI
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
+HY MV LLG G+LEEA L +++ D I GALL+ C N ++AE A+
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 500 KLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
LF P A V ++NIYA G WD +R M ++K PG S I+
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQ 602
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 182/408 (44%), Gaps = 6/408 (1%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
SV WN IR ++ LFR M +P+N+TF V +ACA D+G +VH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWD 187
+ S D +A V + K V A +VF + E D WN+++SG+ S D
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
+F MRL PD T+ L+ + L + + +H + + G+D V + +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 248 SMYSRCKCMDSAYRVFCSISNPD--LVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
S Y +C +DSA VF +I D +V+W+++ YS GE + ++ E K D
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
+ AS + G IH + I G + D++ + I MYSK +F
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 366 LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+M R +S+ +ISG G EA +F +++ G PD T +L+ C G +
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 426 GREIFQRMKDEFNIKARPEHYV--YMVKLLGSAGELEEAYNLTQSLPE 471
G+ I R D + K R + ++ + G + EA ++ + PE
Sbjct: 376 GKWIDAR-ADIYGCK-RDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 191/446 (42%), Gaps = 42/446 (9%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS--TRSVYLWNS 74
KSL + +HA ++ + A + Y D++SA VF+ + R+V WNS
Sbjct: 167 KSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNS 226
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
M +A+++ +A L+ ML + KPD TF + +C + L RL+H A+ G
Sbjct: 227 MFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG 286
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
D + +S YSK A +F+ + V W +ISGY D + +F
Sbjct: 287 TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS-HVGSLLVSMYSRC 253
+M G +PD TL L+ G L G+ + + G D+ + + L+ MYS+C
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKC 406
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
+ A +F + +VTW+ +I+GY+ G + L F K+I K + I VL
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
+ A + ++ G E + H V+ + P +
Sbjct: 467 QACAHSGSLEKGWE----------------------------YFHIMKQVYNISP--GLD 496
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
Y+ ++ LG G EA + + K PDA + ALL AC ++ +I ++
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWGALLNAC----KIHRNVKIAEQA 549
Query: 434 KDE-FNIKAR-PEHYVYMVKLLGSAG 457
+ FN++ + YV M + +AG
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAG 575
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/535 (30%), Positives = 267/535 (49%), Gaps = 4/535 (0%)
Query: 18 SLLRAKQLHACLLKTHLSQDP-FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
S+ + +HA ++KT S P F A L+ +Y+ + SA V R+V W S+I
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
A + F A+ F M + P+++TF C +A A + +H AV G
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
LD + Y K L +A ++F+ I E +L WN+ IS ++ F
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
R + P+ T L +D L +G LHGL +SG D+D V + L+ Y +CK +
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
S+ +F + + V+W +L++ Y Q E EK + + + + + ++++VL++
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
A A + G IH + ++ +E + V SAL+DMY KCG + F MPE+N+++ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGL--APDAATFSALLGACCHAGLVNEGREIFQRMK 434
S+I G G A +F+ + +G P+ TF +LL AC AG V G +IF M+
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
+ I+ EHY +V +LG AG +E AY + +P ++ GAL + C G +L
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWI 548
A+ LF+ +P D+ V+LSN +A GRW + +R+++ G G++K G SWI
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 170/560 (30%), Positives = 278/560 (49%), Gaps = 34/560 (6%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H ++K ++D F LV YA +++SA VFD+MS R+V W SMI +A
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 84 RFDNAVSLF-RTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+AV LF R + ++ P++ T CVI ACA DL V+ SG+ ++ +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
SALV Y K + A R+F+ +L L N++ S Y + +F+ M G R
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
PD ++ + + + G+ HG ++G +S ++ + L+ MY +C D+A+R+
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 263 FCSISNPDLVTWSALISGYSQCGE--------------------------------HEKV 290
F +SN +VTW+++++GY + GE E +
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 291 LLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDM 350
+F E D + + ++ ++ + I+ Y+ ++G++ DV++ + L+DM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 351 YSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATF 410
+S+CG + +F + R++ ++ + I + + G A A +FD ++E+GL PD F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 411 SALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLP 470
L AC H GLV +G+EIF M + HY MV LLG AG LEEA L + +P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 471 EPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKN 530
+ I +LL+ C GN E+A A+K+ P V+LSN+YA GRW+D+
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 531 LRDKMT-GGLRKMPGLSWIE 549
+R M GLRK PG S I+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQ 714
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 233/500 (46%), Gaps = 13/500 (2%)
Query: 10 SELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRL---YAATNDINSAYHVFDKMST 66
S L N CK++ K H L K L D TKLV ++ A VF+ +
Sbjct: 37 SSLKN-CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 67 R-SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRL 125
+ +++NS+IR +A S + A+ LF M+ + I PD YTF + ACA + G
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA- 184
+HG V G D ++LV Y++ G + A +VF+ ++E ++V W S+I GY
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
A D F +R P+ T+ ++ A L G+ ++ SG++ + + S
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
LV MY +C +D A R+F +L +A+ S Y + G + L F ++ +
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
D I + + ++S +Q N+ G HGYV+R+G ES + +ALIDMY KC +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
M + ++++NS+++G +G A+ F+ + EK + +++ ++ L
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFE 451
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEA---YNLTQSLPEPVDKAILGAL 481
E E+F M+ + + A + + G G L+ A Y + +D + L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 482 LSCCNSCGNSELAETVAQKL 501
+ + CG+ E A ++ L
Sbjct: 512 VDMFSRCGDPESAMSIFNSL 531
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
AK ++ + K + D T LV +++ D SA +F+ ++ R V W + I A A+
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS-------- 133
+ + A+ LF M+ +KPD F + AC+ HGG V
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACS-----------HGGLVQQGKEIFYSM 597
Query: 134 ----GLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDV 188
G+ + + +V + GL+ EA ++ + EP+ V+WNSL++ C +V
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA--ACRVQGNV 655
Query: 189 GMQMFSSMRLVGTRPD 204
M +++ ++ P+
Sbjct: 656 EMAAYAAEKIQVLAPE 671
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 276/527 (52%), Gaps = 49/527 (9%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATN----DINSAYHVFDKMSTRSVYL 71
KSL +Q HA +LKT L D F A+KLV +AATN ++ A+ + +++ + + +
Sbjct: 49 AKSLTEIQQAHAFMLKTGLFHDTFSASKLV-AFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD--NFDLGMLRLVHGG 129
NS+IRA+A S + A+++FR ML + PD Y+F V++ACA F+ G R +HG
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEG--RQIHGL 165
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVG 189
+ SGL D + LV+ Y + G A +V + + D V WNSL+S Y D
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEA 225
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
+F M + + + ++S
Sbjct: 226 RALFDEME---------------------------------------ERNVESWNFMISG 246
Query: 250 YSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIME-RKKLDSIL 308
Y+ + A VF S+ D+V+W+A+++ Y+ G + +VL F K++ + +K D
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
+ +VL++ A ++ G +H Y+ +HG+E + +++AL+DMYSKCG + + VFR
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
+R++ ++NS+IS L +HG +A +F ++ +G P+ TF +L AC H G++++ R+
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK 426
Query: 429 IFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSC 488
+F+ M + ++ EHY MV LLG G++EEA L +P +L +LL C
Sbjct: 427 LFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRF 486
Query: 489 GNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
G E AE +A +L + N D++ +SN+YA DGRW+ V + R M
Sbjct: 487 GQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 276/539 (51%), Gaps = 11/539 (2%)
Query: 18 SLLRAKQ---LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
+LL KQ LH LK+ ++ LV +Y A VFD+M R +N+
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
MI + + + +V +F L KPD T + V+RAC DL + + ++ + +G
Sbjct: 279 MICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
L++ + L+ Y+K G + A VFN + D V WNS+ISGY S M++F
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M ++ + D T L+ + L G+GLH KSG+ D V + L+ MY++C
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
+ + ++F S+ D VTW+ +IS + G+ L ++ D L
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
A A R G EIH ++R G ES++++ +ALI+MYSKCG L VF M R++++
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+ +I G++G +A F + + G+ PD+ F A++ AC H+GLV+EG F++MK
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
+ I EHY +V LL + ++ +A Q++P D +I ++L C + G+ E A
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDV----KNLRDKMTGGLRKMPGLSWIE 549
E V++++ + NP D + ++ SN YA +WD V K+L+DK + K PG SWIE
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDK---HITKNPGYSWIE 753
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 215/394 (54%), Gaps = 4/394 (1%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS-TRSVYLWNSMIRAFAL 81
+++HA ++ L F++ KL+ Y+ + S+ VF ++S ++VYLWNS+IRAF+
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ F A+ + + + + PD YTF VI+ACA FD M LV+ + G D
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+ALV YS++GL+ A +VF+ + DLV WNSLISGY ++ ++++ ++
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
PD +T++ +L + ++ GQGLHG + KSG++S V + LV+MY + + A R
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 262 VFCSISNPDLVTWSALISGYSQCGE-HEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
VF + D V+++ +I GY + E V +F L ++ K D + V++VL +
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL--DQFKPDLLTVSSVLRACGHLR 321
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
++ I+ Y+++ G + V + LID+Y+KCG + VF M ++ +S+NS+IS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
G G EA ++F ++ D T+ L+
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 197/410 (48%), Gaps = 9/410 (2%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+ L AK ++ +LK + L+ +YA D+ +A VF+ M + WNS+I
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ S A+ LF+ M+ + + D+ T+ +I DL + +H + SG+
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC 440
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+D +AL+ Y+K G V ++ ++F+ + D V WN++IS + G+Q+ + M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
R PD T L A + +G+ +H + G +S+ +G+ L+ MYS+C C+
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL--DSILVATVLA 314
+++ RVF +S D+VTW+ +I Y GE EK L F ME+ + DS++ ++
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD--MEKSGIVPDSVVFIAIIY 618
Query: 315 SIAQTANVRPGCEIHGYVIRH-GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
+ + + V G + H ++ ++ + ++D+ S+ + + MP +
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA 678
Query: 374 S-YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
S + SV+ G A R+ RI+E L PD +S +L + +A L
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIE--LNPDDPGYS-ILASNAYAAL 725
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Query: 227 LHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN-PDLVTWSALISGYSQCG 285
+H L GLDS L+ YS + S+ VF +S ++ W+++I +S+ G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
+ L F+ KL + D +V+ + A + G ++ ++ G ESD+ V +
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 346 ALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP 405
AL+DMYS+ G L VF MP R+++S+NS+ISG HG EA ++ + + P
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205
Query: 406 DAATFSALLGACCHAGLVNEGR 427
D+ T S++L A + +V +G+
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQ 227
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
+ ++ S ++ L+S + +R IH VI GL+S S LID YS
Sbjct: 2 QTRVSSPFISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASS 58
Query: 361 ICVFR-LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
+ VFR + P +N+ +NS+I +G EA + ++ E ++PD TF +++ AC
Sbjct: 59 LSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC-- 116
Query: 420 AGLVNE--GREIFQRMKD 435
AGL + G +++++ D
Sbjct: 117 AGLFDAEMGDLVYEQILD 134
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 269/514 (52%), Gaps = 12/514 (2%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
L+ LY D+ A +FD++S R V W +MI F+ +A+ LF+ M D+K +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 104 NYTFACVIRACADNFDLGMLR---LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANR 160
+T+ V+++C D LG L+ +HG + I SAL+S Y++ G + EA
Sbjct: 113 QFTYGSVLKSCKD---LGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
F+ + E DLV WN++I GY +A D +F M G +PD +T LL
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC 229
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
L I LHGL+ K G S + LV+ Y +C + +A+++ DL++ +ALI+G
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 281 YSQCGE-HEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG-LE 338
+SQ F+ +I + K+D ++V+++L A+V G +IHG+ ++ +
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIR 349
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRI 398
DV + ++LIDMY+K G + + F M E+++ S+ S+I+G G HG +A +++R+
Sbjct: 350 FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Query: 399 LEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGE 458
+ + P+ TF +LL AC H G G +I+ M ++ I+AR EH ++ +L +G
Sbjct: 410 EHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGY 469
Query: 459 LEEAYNLTQSLPEPV--DKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLS 516
LEEAY L +S V + GA L C GN +L++ A +L P + L+
Sbjct: 470 LEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLA 529
Query: 517 NIYAGDGRWDDVKNLRD--KMTGGLRKMPGLSWI 548
++YA +G WD+ N R K +G K PG S +
Sbjct: 530 SVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 16/392 (4%)
Query: 6 QWLHSELSNVCKSL---LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFD 62
Q+ + + CK L Q+H + K + + + + L+ LYA + A FD
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 63 KMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGM 122
M R + WN+MI + + D + SLF+ ML KPD +TF ++RA L +
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG- 181
+ +HG A+ G G + +LV+AY K G + A ++ G + DL+ +LI+G+
Sbjct: 233 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 292
Query: 182 ----CSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG-L 236
S A+D+ F M + T+ D ++ +L + + IG+ +HG + KS +
Sbjct: 293 QNNCTSDAFDI----FKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI 348
Query: 237 DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRK 296
D +G+ L+ MY++ ++ A F + D+ +W++LI+GY + G EK + + +
Sbjct: 349 RFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNR 408
Query: 297 LIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI-RHGLESDVKVSSALIDMYSKCG 355
+ ER K + + ++L++ + T G +I+ +I +HG+E+ + S +IDM ++ G
Sbjct: 409 MEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSG 468
Query: 356 FLHFGICVFRLMPERNIISYNSVISGLGLHGC 387
+L + R + I+S +S G L C
Sbjct: 469 YLEEAYALIR--SKEGIVSLSSSTWGAFLDAC 498
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 175/397 (44%), Gaps = 4/397 (1%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGC 182
L L+HG ++ +G + L+ Y K G V A ++F+ I++ D+V W ++IS +
Sbjct: 31 LLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSR 90
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ +F M + + +T +L D L G +HG K + V
Sbjct: 91 CGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIV 150
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
S L+S+Y+RC M+ A F S+ DLV+W+A+I GY+ + F+ ++ E K
Sbjct: 151 RSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK 210
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
K D ++L + + E+HG I+ G + +L++ Y KCG L
Sbjct: 211 KPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWK 270
Query: 363 VFRLMPERNIISYNSVISGLGLH-GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG 421
+ +R+++S ++I+G C S+AF +F ++ D S++L C
Sbjct: 271 LHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIA 330
Query: 422 LVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGAL 481
V GR+I I+ ++ + +GE+E+A + + E D +L
Sbjct: 331 SVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK-DVRSWTSL 389
Query: 482 LSCCNSCGNSELAETVAQKLFQN--NPADNAFKVMLS 516
++ GN E A + ++ P D F +LS
Sbjct: 390 IAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 277/534 (51%), Gaps = 10/534 (1%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
+ +H ++K L+R+YA A VF +M T+ + WNS++ +F
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC--ADNFDLGMLRLVHGGAVASGLGLDA 139
R +A+ L +M+ + + TF + AC D F+ G R++HG V SGL +
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG--RILHGLVVVSGLFYNQ 380
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
I +ALVS Y K+G + E+ RV + D+V WN+LI GY D + F +MR+
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 440
Query: 200 GTRPDGYTLAGLLGGIADP-SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
G + T+ +L P LL G+ LH +G +SD HV + L++MY++C + S
Sbjct: 441 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 500
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
+ +F + N +++TW+A+++ + G E+VL K+ LD + L++ A+
Sbjct: 501 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 560
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP--ERNIISYN 376
A + G ++HG ++ G E D + +A DMYSKCG G V L P R++ S+N
Sbjct: 561 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG--EIGEVVKMLPPSVNRSLPSWN 618
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+IS LG HG E F +LE G+ P TF +LL AC H GLV++G + + +
Sbjct: 619 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 678
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
F ++ EH + ++ LLG +G L EA +P + + +LL+ C GN +
Sbjct: 679 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 738
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
A+ L + P D++ V+ SN++A GRW+DV+N+R +M ++K SW++
Sbjct: 739 AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 792
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 196/409 (47%), Gaps = 1/409 (0%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
+Q+ ++K+ L L+ + + +++ A ++FD+MS R WNS+ A+A
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ + + +F M + ++ T + ++ R +HG V G
Sbjct: 222 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 281
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
C+ L+ Y+ G EAN VF + DL+ WNSL++ + + + SM G
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
+ T L P G+ LHGL SGL + +G+ LVSMY + M + R
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
V + D+V W+ALI GY++ + +K L F+ + +E + I V +VL++ +
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 322 -VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
+ G +H Y++ G ESD V ++LI MY+KCG L +F + RNII++N++++
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 521
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
HG E ++ ++ G++ D +FS L A ++ EG+++
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 194/407 (47%), Gaps = 1/407 (0%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H + K+ L D + +T ++ LY ++ + VF++M R+V W S++ ++
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
+ + +++ M G + + + + VI +C D + R + G V SGL +
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
+L+S +G V AN +F+ ++E D + WNS+ + Y + + ++FS MR
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
+ T++ LL + G+G+HGL K G DS V + L+ MY+ A VF
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 264 CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVR 323
+ DL++W++L++ + G L +I K ++ + + LA+
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
G +HG V+ GL + + +AL+ MY K G + V MP R+++++N++I G
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG-LVNEGREI 429
+A F + +G++ + T ++L AC G L+ G+ +
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 469
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)
Query: 64 MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN---FDL 120
M R+ WN+M+ + + FR M IKP ++ A ++ AC + F
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 121 GMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY 180
G+ VHG SGL D +A++ Y GLV + +VF + + ++V W SL+ GY
Sbjct: 61 GV--QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL---GGIADPSLLCIGQGLHGLSHKSGLD 237
+ + ++ MR G + +++ ++ G + D SL G+ + G KSGL+
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL---GRQIIGQVVKSGLE 175
Query: 238 SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKL 297
S V + L+SM +D A +F +S D ++W+++ + Y+Q G E+ F +
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 298 IMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL 357
+++S V+T+L+ + + + G IHG V++ G +S V V + L+ MY+ G
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 358 HFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
VF+ MP +++IS+NS+++ G + +A + ++ G + + TF++ L AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 418 CHAGLVNEGR 427
+GR
Sbjct: 356 FTPDFFEKGR 365
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 174/371 (46%), Gaps = 7/371 (1%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
+ + LH ++ + L + LV +Y +++ + V +M R V WN++I +A
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC---ADNFDLGMLRLVHGGAVASGLGL 137
+ D A++ F+TM + + T V+ AC D + G + +H V++G
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG--KPLHAYIVSAGFES 480
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
D ++L++ Y+K G + + +FNG+ +++ WN++++ + +++ S MR
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G D ++ + L A ++L GQ LHGL+ K G + DS + + MYS+C +
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
++ N L +W+ LIS + G E+V F +++ K + ++L + +
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660
Query: 318 QTANVRPGCEIHGYVIRH-GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER-NIISY 375
V G + + R GLE ++ +ID+ + G L MP + N + +
Sbjct: 661 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 720
Query: 376 NSVISGLGLHG 386
S+++ +HG
Sbjct: 721 RSLLASCKIHG 731
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 171 VLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADP-SLLCIGQGLHG 229
V WN+++SG + GM+ F M +G +P + +A L+ S+ G +HG
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEK 289
KSGL SD +V + ++ +Y + + +VF + + ++V+W++L+ GYS GE E+
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 290 VLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALID 349
V+ ++ + E + ++ V++S + G +I G V++ GLES + V ++LI
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 350 MYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAAT 409
M G + + +F M ER+ IS+NS+ + +G E+FR+F + ++ T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 410 FSALLGACCHAGLVNEGREI 429
S LL H GR I
Sbjct: 247 VSTLLSVLGHVDHQKWGRGI 266
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 5/207 (2%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L R K LHA ++ D L+ +YA D++S+ +F+ + R++ WN+M+ A
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
A + + L M + D ++F+ + A A L + +HG AV G D
Sbjct: 523 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 582
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ +A YSK G + E ++ L WN LIS G ++ F M
Sbjct: 583 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 642
Query: 199 VGTRPDGYTLAGLL-----GGIADPSL 220
+G +P T LL GG+ D L
Sbjct: 643 MGIKPGHVTFVSLLTACSHGGLVDKGL 669
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/560 (30%), Positives = 278/560 (49%), Gaps = 34/560 (6%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H ++K ++D F LV YA +++SA VFD+MS R+V W SMI +A
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 84 RFDNAVSLF-RTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+AV LF R + ++ P++ T CVI ACA DL V+ SG+ ++ +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
SALV Y K + A R+F+ +L L N++ S Y + +F+ M G R
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
PD ++ + + + G+ HG ++G +S ++ + L+ MY +C D+A+R+
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 263 FCSISNPDLVTWSALISGYSQCGE--------------------------------HEKV 290
F +SN +VTW+++++GY + GE E +
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 291 LLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDM 350
+F E D + + ++ ++ + I+ Y+ ++G++ DV++ + L+DM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 351 YSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATF 410
+S+CG + +F + R++ ++ + I + + G A A +FD ++E+GL PD F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 411 SALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLP 470
L AC H GLV +G+EIF M + HY MV LLG AG LEEA L + +P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 471 EPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKN 530
+ I +LL+ C GN E+A A+K+ P V+LSN+YA GRW+D+
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 531 LRDKMT-GGLRKMPGLSWIE 549
+R M GLRK PG S I+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQ 714
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 233/500 (46%), Gaps = 13/500 (2%)
Query: 10 SELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRL---YAATNDINSAYHVFDKMST 66
S L N CK++ K H L K L D TKLV ++ A VF+ +
Sbjct: 37 SSLKN-CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 67 R-SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRL 125
+ +++NS+IR +A S + A+ LF M+ + I PD YTF + ACA + G
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA- 184
+HG V G D ++LV Y++ G + A +VF+ ++E ++V W S+I GY
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
A D F +R P+ T+ ++ A L G+ ++ SG++ + + S
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
LV MY +C +D A R+F +L +A+ S Y + G + L F ++ +
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
D I + + ++S +Q N+ G HGYV+R+G ES + +ALIDMY KC +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
M + ++++NS+++G +G A+ F+ + EK + +++ ++ L
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFE 451
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEA---YNLTQSLPEPVDKAILGAL 481
E E+F M+ + + A + + G G L+ A Y + +D + L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 482 LSCCNSCGNSELAETVAQKL 501
+ + CG+ E A ++ L
Sbjct: 512 VDMFSRCGDPESAMSIFNSL 531
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
AK ++ + K + D T LV +++ D SA +F+ ++ R V W + I A A+
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS-------- 133
+ + A+ LF M+ +KPD F + AC+ HGG V
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACS-----------HGGLVQQGKEIFYSM 597
Query: 134 ----GLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDV 188
G+ + + +V + GL+ EA ++ + EP+ V+WNSL++ C +V
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA--ACRVQGNV 655
Query: 189 GMQMFSSMRLVGTRPD 204
M +++ ++ P+
Sbjct: 656 EMAAYAAEKIQVLAPE 671
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 277/534 (51%), Gaps = 10/534 (1%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
+ +H ++K L+R+YA A VF +M T+ + WNS++ +F
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC--ADNFDLGMLRLVHGGAVASGLGLDA 139
R +A+ L +M+ + + TF + AC D F+ G R++HG V SGL +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG--RILHGLVVVSGLFYNQ 397
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
I +ALVS Y K+G + E+ RV + D+V WN+LI GY D + F +MR+
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 457
Query: 200 GTRPDGYTLAGLLGGIADP-SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
G + T+ +L P LL G+ LH +G +SD HV + L++MY++C + S
Sbjct: 458 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
+ +F + N +++TW+A+++ + G E+VL K+ LD + L++ A+
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 577
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP--ERNIISYN 376
A + G ++HG ++ G E D + +A DMYSKCG G V L P R++ S+N
Sbjct: 578 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG--EIGEVVKMLPPSVNRSLPSWN 635
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+IS LG HG E F +LE G+ P TF +LL AC H GLV++G + + +
Sbjct: 636 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 695
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
F ++ EH + ++ LLG +G L EA +P + + +LL+ C GN +
Sbjct: 696 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 755
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
A+ L + P D++ V+ SN++A GRW+DV+N+R +M ++K SW++
Sbjct: 756 AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 809
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 196/409 (47%), Gaps = 1/409 (0%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
+Q+ ++K+ L L+ + + +++ A ++FD+MS R WNS+ A+A
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ + + +F M + ++ T + ++ R +HG V G
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
C+ L+ Y+ G EAN VF + DL+ WNSL++ + + + SM G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
+ T L P G+ LHGL SGL + +G+ LVSMY + M + R
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
V + D+V W+ALI GY++ + +K L F+ + +E + I V +VL++ +
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 322 -VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
+ G +H Y++ G ESD V ++LI MY+KCG L +F + RNII++N++++
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 538
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
HG E ++ ++ G++ D +FS L A ++ EG+++
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 190/387 (49%), Gaps = 11/387 (2%)
Query: 47 LYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYT 106
+Y + A H+FD M R+ WN+M+ + + FR M IKP ++
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 107 FACVIRACADN---FDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
A ++ AC + F G+ VHG SGL D +A++ Y GLV + +VF
Sbjct: 61 IASLVTACGRSGSMFREGV--QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL---GGIADPSL 220
+ + ++V W SL+ GY + + ++ MR G + +++ ++ G + D SL
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
G+ + G KSGL+S V + L+SM +D A +F +S D ++W+++ +
Sbjct: 179 ---GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
Y+Q G E+ F + +++S V+T+L+ + + + G IHG V++ G +S
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
V V + L+ MY+ G VF+ MP +++IS+NS+++ G + +A + ++
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGR 427
G + + TF++ L AC +GR
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGR 382
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 194/407 (47%), Gaps = 1/407 (0%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H + K+ L D + +T ++ LY ++ + VF++M R+V W S++ ++
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
+ + +++ M G + + + + VI +C D + R + G V SGL +
Sbjct: 140 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 199
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
+L+S +G V AN +F+ ++E D + WNS+ + Y + + ++FS MR
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
+ T++ LL + G+G+HGL K G DS V + L+ MY+ A VF
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 264 CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVR 323
+ DL++W++L++ + G L +I K ++ + + LA+
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
G +HG V+ GL + + +AL+ MY K G + V MP R+++++N++I G
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG-LVNEGREI 429
+A F + +G++ + T ++L AC G L+ G+ +
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 486
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 174/371 (46%), Gaps = 7/371 (1%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
+ + LH ++ + L + LV +Y +++ + V +M R V WN++I +A
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC---ADNFDLGMLRLVHGGAVASGLGL 137
+ D A++ F+TM + + T V+ AC D + G + +H V++G
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG--KPLHAYIVSAGFES 497
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
D ++L++ Y+K G + + +FNG+ +++ WN++++ + +++ S MR
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G D ++ + L A ++L GQ LHGL+ K G + DS + + MYS+C +
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
++ N L +W+ LIS + G E+V F +++ K + ++L + +
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677
Query: 318 QTANVRPGCEIHGYVIRH-GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER-NIISY 375
V G + + R GLE ++ +ID+ + G L MP + N + +
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 737
Query: 376 NSVISGLGLHG 386
S+++ +HG
Sbjct: 738 RSLLASCKIHG 748
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 1/282 (0%)
Query: 149 YSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTL 208
Y+K G V A +F+ + + V WN+++SG + GM+ F M +G +P + +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 209 AGLLGGIADP-SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
A L+ S+ G +HG KSGL SD +V + ++ +Y + + +VF +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
+ ++V+W++L+ GYS GE E+V+ ++ + E + ++ V++S + G +
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 328 IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGC 387
I G V++ GLES + V ++LI M G + + +F M ER+ IS+NS+ + +G
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 388 ASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
E+FR+F + ++ T S LL H GR I
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 5/207 (2%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L R K LHA ++ D L+ +YA D++S+ +F+ + R++ WN+M+ A
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
A + + L M + D ++F+ + A A L + +HG AV G D
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 599
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ +A YSK G + E ++ L WN LIS G ++ F M
Sbjct: 600 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 659
Query: 199 VGTRPDGYTLAGLL-----GGIADPSL 220
+G +P T LL GG+ D L
Sbjct: 660 MGIKPGHVTFVSLLTACSHGGLVDKGL 686
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 276/538 (51%), Gaps = 13/538 (2%)
Query: 10 SELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAA---TNDINSAYHVFDKMST 66
S+L N C+SL+ QLH ++K+ + ++ ++L+ T +++ A VF+ +
Sbjct: 11 SQLEN-CRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 67 RSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLV 126
SVY+WNSMIR ++ S D A+ ++ ML PD +TF V++AC+ D+ V
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 127 HGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAW 186
HG V +G ++ + L+ Y G V+ RVF I + ++V W SLISG+ + +
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDS--DSHVG- 243
++ F M+ G + + + LL + G+ HG G D S VG
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249
Query: 244 -----SLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
+ L+ MY++C + +A +F + LV+W+++I+GYSQ G+ E+ L F ++
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
D + +V+ + + G IH YV + G D + AL++MY+K G
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 359 FGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLA-PDAATFSALLGAC 417
F + +++ I++ VI GL HG +EA +F R+ EKG A PD T+ +L AC
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Query: 418 CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAI 477
H GLV EG+ F M+D ++ EHY MV +L AG EEA L +++P + I
Sbjct: 430 SHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNI 489
Query: 478 LGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
GALL+ C+ N EL + + + + + V+LSNIYA GRW DVK +R+ M
Sbjct: 490 WGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESM 547
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 270/537 (50%), Gaps = 10/537 (1%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C S+ + +Q+ A +L + + F K V L D N + +F + Y +N M
Sbjct: 47 CISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEEPNHYSFNYM 102
Query: 76 IRAFALS-QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
IR + + A+SL+R M + +KPD +T+ V ACA ++G+ R VH G
Sbjct: 103 IRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVG 162
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
L D +L+ Y+K G V A ++F+ I E D V WNS+ISGY + M +F
Sbjct: 163 LERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFR 222
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M G PD TL +LG + L G+ L ++ + + +GS L+SMY +C
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG 282
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
+DSA RVF + D V W+A+I+ YSQ G+ + F ++ D+ ++TVL+
Sbjct: 283 DLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 342
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+ + G +I + L+ ++ V++ L+DMY KCG + + VF MP +N +
Sbjct: 343 ACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT 402
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+N++I+ G A EA +FDR+ + P TF +L AC HAGLV++G F M
Sbjct: 403 WNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMS 459
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
F + + EHY ++ LL AG L+EA+ + P D+ +L A+L C+ + +
Sbjct: 460 SMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIR 519
Query: 495 ETVAQKLFQNNPADNAFK-VMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
E + L + A NA V+ SN+ A WD+ +R M G+ K PG SWIE
Sbjct: 520 EKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 576
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 280/531 (52%), Gaps = 4/531 (0%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L + LH +K L+ F + + Y+ + + + AY F ++ ++ W S+I
Sbjct: 245 ALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ A S + + +F M + PD +C+I + + HG + L
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL 364
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEP-DLVLWNSLISGYGCSAAWDVGMQMFSSM 196
D+ C++L+S Y K L+ A ++F I+E + WN+++ GYG +++F +
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+ +G D + ++ + + +G+ LH K+ LD V + L+ +Y + +
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
A+R+FC ++ +++TW+A+I+ Y C + EK + F +++ E K SI + T+L +
Sbjct: 485 TVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
T ++ G IH Y+ E ++ +S+ALIDMY+KCG L +F +++ + +N
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+ISG G+HG A +FD++ E + P TF ALL AC HAGLV +G+++F +M +
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-Q 662
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
+++K +HY +V LL +G LEEA + S+P D I G LLS C + G E+
Sbjct: 663 YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIR 722
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLS 546
+A++ ++P ++ + +ML+N+Y+ G+W++ + R+ M G+ K G S
Sbjct: 723 MAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 214/418 (51%), Gaps = 7/418 (1%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL ++ +A ++ LS++ F A+KL+ YA+ N + VF ++ R ++LWNS+I+
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
A + + ++ F +ML + PD++T V+ ACA+ + VHG + G G
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG-GF 157
Query: 138 D--AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
D ++ V YSK G + +A VF+ + + D+V W ++ISG+ + + G+
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 196 MRLVGT---RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
M G+ +P+ TL ++ L G+ LHG + K+GL S V S + S YS+
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
AY F + + D+ +W+++I+ ++ G+ E+ F ++ + D ++++ +
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF-RLMPERN 371
+ + + V G HG+VIRH D V ++L+ MY K L +F R+ E N
Sbjct: 338 INELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
++N+++ G G C + +F +I G+ D+A+ ++++ +C H G V G+ +
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 225/504 (44%), Gaps = 40/504 (7%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTM--LGADI- 100
V Y+ + A VFD+M R V W ++I + + + M G+D+
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 101 KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANR 160
KP+ T C +AC++ L R +HG AV +GL S++ S YSK G EA
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
F + + D+ W S+I+ S + MF M+ G PDG ++ L+ + L
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP-DLVTWSALIS 279
+ G+ HG + DS V + L+SMY + + + A ++FC IS + W+ ++
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
GY + H K + FRK+ ++DS +V++S + V G +H YV++ L+
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
+ V ++LID+Y K G L +F + N+I++N++I+ + +A +FDR++
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD---EFNIK---------ARPEH-- 445
+ P + T LL AC + G + G+ I + + + E N+ A+ H
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585
Query: 446 ----------------YVYMVKLLGSAGELEEAYNLTQSLPE----PVDKAILGALLSCC 485
+ M+ G G++E A L + E P L ALLS C
Sbjct: 586 KSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFL-ALLSAC 644
Query: 486 NSCGNSELAETVAQKLFQNNPADN 509
G E + + K+ Q + N
Sbjct: 645 THAGLVEQGKKLFLKMHQYDVKPN 668
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 155/318 (48%), Gaps = 4/318 (1%)
Query: 114 CADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLW 173
C + L LR + + GL + S L+S+Y+ G + ++RVF+ + D+ LW
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 174 NSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHK 233
NS+I + + + + F SM L G PD +T ++ A+ +G +HGL K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 234 -SGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLL 292
G D ++ VG+ V YS+C + A VF + + D+V W+A+ISG+ Q GE E L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 293 FFRKLIMERKKLDSILVATVLASIAQTAN---VRPGCEIHGYVIRHGLESDVKVSSALID 349
+ K+ +D T+ +N ++ G +HG+ +++GL S V S++
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 350 MYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAAT 409
YSK G FR + + ++ S+ S+I+ L G E+F MF + KG+ PD
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 410 FSALLGACCHAGLVNEGR 427
S L+ LV +G+
Sbjct: 334 ISCLINELGKMMLVPQGK 351
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 291/571 (50%), Gaps = 37/571 (6%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVR---LYAATNDINSAYHVFDKMSTRSVYLW 72
CK+L + +HA ++K L + +KL+ L + A VF + ++ +W
Sbjct: 43 CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIW 102
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N+M R ALS +A+ L+ M+ + P++YTF V+++CA + + +HG +
Sbjct: 103 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 133 SGLGLD-------------------------------AICCSALVSAYSKLGLVHEANRV 161
G LD + +AL+ Y+ G + A ++
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 162 FNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLL 221
F+ I D+V WN++ISGY + + +++F M RPD T+ ++ A +
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY 281
+G+ +H G S+ + + L+ +YS+C +++A +F + D+++W+ LI GY
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRH--GLES 339
+ +++ LL F++++ + + + + ++L + A + G IH Y+ + G+ +
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
+ ++LIDMY+KCG + VF + +++ S+N++I G +HG A +F +F R+
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGEL 459
+ G+ PD TF LL AC H+G+++ GR IF+ M ++ + + EHY M+ LLG +G
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 460 EEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIY 519
+EA + + D I +LL C GN EL E+ A+ L + P + V+LSNIY
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 520 AGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A GRW++V R + G++K+PG S IE
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 613
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 271 bits (693), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 277/532 (52%), Gaps = 4/532 (0%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L R K++H +++ D L+ +Y D+ SA +FD+M R + WN+MI
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
+ + + LF M G + PD T VI AC D + R +H + +G +D
Sbjct: 272 YFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
C++L Y G EA ++F+ + D+V W ++ISGY + D + + M
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
+PD T+A +L A L G LH L+ K+ L S V + L++MYS+CKC+D
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A +F +I ++++W+++I+G + L+F R++ M + ++I + LA+ A+
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQP-NAITLTAALAACAR 510
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
+ G EIH +V+R G+ D + +AL+DMY +CG ++ F ++++ S+N +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNIL 569
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFN 438
++G G S +FDR+++ + PD TF +LL C + +V +G F +M+D +
Sbjct: 570 LTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YG 628
Query: 439 IKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVA 498
+ +HY +V LLG AGEL+EA+ Q +P D A+ GALL+ C +L E A
Sbjct: 629 VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSA 688
Query: 499 QKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
Q +F+ + + ++L N+YA G+W +V +R M GL G SW+E
Sbjct: 689 QHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 203/384 (52%), Gaps = 2/384 (0%)
Query: 47 LYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD-IKPDNY 105
++ ++ A++VF KMS R+++ WN ++ +A FD A+ L+ ML +KPD Y
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 106 TFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI 165
TF CV+R C DL + VH V G LD +AL++ Y K G V A +F+ +
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
D++ WN++ISGY + G+++F +MR + PD TL ++ +G+
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
+H +G D V + L MY A ++F + D+V+W+ +ISGY
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
+K + +R + + K D I VA VL++ A ++ G E+H I+ L S V V++
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 346 ALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP 405
LI+MYSKC + + +F +P +N+IS+ S+I+GL L+ EA +F R ++ L P
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQP 496
Query: 406 DAATFSALLGACCHAGLVNEGREI 429
+A T +A L AC G + G+EI
Sbjct: 497 NAITLTAALAACARIGALMCGKEI 520
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 193/398 (48%), Gaps = 22/398 (5%)
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
+ + A+ L +M + D F ++R C V+ A++S L +
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGN 133
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV-GTR 202
A ++ + + G + +A VF ++E +L WN L+ GY +D M ++ M V G +
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 203 PDGYTLAGLL---GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
PD YT +L GGI D L G+ +H + G + D V + L++MY +C + SA
Sbjct: 194 PDVYTFPCVLRTCGGIPD---LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGE-HEKVLLFF--RKLIMERKKLDSILVATVLASI 316
+F + D+++W+A+ISGY + G HE + LFF R L ++ D + + +V+++
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP---DLMTLTSVISAC 307
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
+ R G +IH YVI G D+ V ++L MY G +F M ++I+S+
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
++ISG + +A + + + + PD T +A+L AC G ++ G E+ +
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK----- 422
Query: 437 FNIKARPEHYVY----MVKLLGSAGELEEAYNLTQSLP 470
IKAR YV ++ + +++A ++ ++P
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L+ K++HA +L+T + D F L+ +Y +N+A+ F+ + V WN ++
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLT 571
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
++ + V LF M+ + ++PD TF ++ C+ + + + G+
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGI-AEPDLVLWNSLISGYGCSAAWDVG 189
+ + +V + G + EA++ + PD +W +L++ D+G
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLG 684
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/541 (31%), Positives = 284/541 (52%), Gaps = 12/541 (2%)
Query: 12 LSNVCKSLLRAKQLHACLLKTHLSQDP-FYATKLVRLYAATNDINSAYHVFDKMSTRSVY 70
L +CKS + Q+HA +++ L QD + + ++++ ++ + VF+++ + Y
Sbjct: 16 LFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTY 75
Query: 71 LWNSMIRAFALSQRFDNAVS-LFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
LWN +I+ ++ F VS L R M +PD YTF V++ C++N + + VHG
Sbjct: 76 LWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGL 135
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVG 189
+ G D + ++ V Y K + A +VF + E + V W +L+ Y S +
Sbjct: 136 VLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEA 195
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
MF L+ R G + L+ G+ L + L K + S + ++
Sbjct: 196 KSMFD---LMPERNLG-SWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS----MIDG 247
Query: 250 YSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILV 309
Y++ M SA +F D+ WSALI GY+Q G+ + F ++ + K D ++
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM 307
Query: 310 ATVLASIAQTANVRPGCEIHGYV-IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
++++ +Q ++ Y+ R S V ALIDM +KCG + +F MP
Sbjct: 308 VGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
+R+++SY S++ G+ +HGC SEA R+F++++++G+ PD F+ +L C + LV EG
Sbjct: 368 QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLR 427
Query: 429 IFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSC 488
F+ M+ +++I A P+HY +V LL G+L+EAY L +S+P + G+LL C+
Sbjct: 428 YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLH 487
Query: 489 GNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSW 547
GN+E+AE VA+ LF+ P V+LSNIYA RW DV +LRDKM G+ K+ G SW
Sbjct: 488 GNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSW 547
Query: 548 I 548
I
Sbjct: 548 I 548
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 266/508 (52%), Gaps = 31/508 (6%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
R + LHA L+ + +++ A KLV Y + A VFD+M R + MI A A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
+ + ++ FR M +K D + +++A + D +++H + DA
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
S+L+ YSK G V A +VF+ + E DLV++N++ISGY ++ D + + M+L+G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
+PD T L+ G SH + S + L+ C+D Y
Sbjct: 214 IKPDVITWNALISG---------------FSHMRNEEKVSEILELM--------CLD-GY 249
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+ PD+V+W+++ISG ++EK F++++ +S + T+L + A
Sbjct: 250 K-------PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLA 302
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
++ G EIHGY + GLE V SAL+DMY KCGF+ + +FR P++ +++NS+I
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIF 362
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
HG A +A +FD++ G D TF+A+L AC HAGL + G+ +F M++++ I
Sbjct: 363 CYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIV 422
Query: 441 ARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQK 500
R EHY MV LLG AG+L EAY + +++ D + GALL+ C + GN ELA A+
Sbjct: 423 PRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKH 482
Query: 501 LFQNNPADNAFKVMLSNIYAGDGRWDDV 528
L + P ++ ++L+++YA G W+ V
Sbjct: 483 LAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%)
Query: 220 LLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALIS 279
L C G+ LH SG+ + + + LV+ Y C + A +VF + D+ +I
Sbjct: 31 LFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIG 90
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
++ G +++ L FFR++ + KLD+ +V ++L + + G IH V++ ES
Sbjct: 91 ACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYES 150
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
D + S+LIDMYSK G + VF + E++++ +N++ISG + A EA + +
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
G+ PD T++AL+ H + EI + M
Sbjct: 211 LLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 276/532 (51%), Gaps = 14/532 (2%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
QL + ++KT L D + +Y+ + A VFD+MS + + WNS++ +
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 84 RFD-NAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
F AV +FR M+ ++ D+ +F VI C DL + R +HG + G
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ L+S YSK G++ VF+ ++E ++V W ++IS + D + +F +MR G
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVY 369
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
P+ T GL+ + + G +HGL K+G S+ VG+ +++Y++ + ++ A +
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 263 FCSISNPDLVTWSALISGYSQCG-EHEKVLLFFR---KLIMERKKLDSILVATVLASIAQ 318
F I+ ++++W+A+ISG++Q G HE + +F + + S+L A + A+
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAI---AFAE 486
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
+V+ G H ++++ GL S VSSAL+DMY+K G + VF M ++N + S+
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFN 438
IS HG +F +++++ +APD TF ++L AC G+V++G EIF M + +N
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 606
Query: 439 IKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVA 498
++ EHY MV +LG AG L+EA L +P +++L ++L C GN ++ VA
Sbjct: 607 LEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVA 666
Query: 499 QKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+ + P + V + NIYA WD +R M + K G SWI+
Sbjct: 667 ELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWID 718
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 11/328 (3%)
Query: 103 DNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF 162
D T ++AC + G +HG + SG +A++ Y K G A +F
Sbjct: 77 DEVTLCLALKACRGDLKRGCQ--IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC 222
+ +PD+V WN+++SG+ + + + M+ G D +T + L
Sbjct: 135 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
+G L K+GL+SD VG+ ++MYSR A RVF +S D+++W++L+SG S
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 283 QCGEHE-KVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
Q G + ++ FR ++ E +LD + +V+ + +++ +IHG I+ G ES +
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEK 401
+V + L+ YSKCG L VF M ERN++S+ ++IS +A +F +
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFD 366
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREI 429
G+ P+ TF L+ A + EG +I
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/572 (22%), Positives = 251/572 (43%), Gaps = 57/572 (9%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L R Q+H + + + ++ +Y ++A +F+ + V WN+++
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 151
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC--ADNFDLGMLRLVHGGAVASGLG 136
F +Q A++ M A + D +T++ + C ++ F LG+ + V +GL
Sbjct: 152 FDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ--LQSTVVKTGLE 206
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDV-GMQMFSS 195
D + ++ ++ YS+ G A RVF+ ++ D++ WNSL+SG + + +F
Sbjct: 207 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRD 266
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
M G D + ++ + L + + +HGL K G +S VG++L+S YS+C
Sbjct: 267 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+++ VF +S ++V+W+ +IS + + F + + + + ++ +
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
+ ++ G +IHG I+ G S+ V ++ I +Y+K L F + R IIS+
Sbjct: 382 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC-------------CHAGL 422
N++ISG +G + EA +MF + + P+ TF ++L A CHA L
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 423 VNEG-----------------REIFQRMKDEFNIKARPEHYVY--MVKLLGSAGELEEAY 463
+ G R + FN ++ +V+ ++ S G+ E
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 464 NLTQSL-PEPV--DKAILGALLSCCNSCGNSELAETVAQ---KLFQNNPADNAFKVMLSN 517
NL + E V D ++L+ CN G + + +++ P+ + M+ +
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV-D 619
Query: 518 IYAGDGRWDDVKNLRDKMTGGLRKMPGLSWIE 549
+ GR + + L ++ GG PG S ++
Sbjct: 620 MLGRAGRLKEAEELMSEVPGG----PGESMLQ 647
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/529 (29%), Positives = 271/529 (51%), Gaps = 3/529 (0%)
Query: 23 KQLHACLLKTHLSQDPFYA-TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
K++HA +LK+ Y L+ +Y + A + +M+ V WNS+I+ +
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ + A+ F M+ A K D + +I A +L +H + G +
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+ L+ YSK L R F + + DL+ W ++I+GY + +++F +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
D L +L + + I + +H + GL D+ + + LV +Y +C+ M A R
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATR 542
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
VF SI D+V+W+++IS + G + + FR+++ DS+ + +L++ A +
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSA 602
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
+ G EIH Y++R G + ++ A++DMY+ CG L VF + + ++ Y S+I+
Sbjct: 603 LNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 662
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKA 441
G+HGC A +FD++ + ++PD +F ALL AC HAGL++EGR + M+ E+ ++
Sbjct: 663 YGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEP 722
Query: 442 RPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
PEHYV +V +LG A + EA+ + + + ALL+ C S E+ E AQ+L
Sbjct: 723 WPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRL 782
Query: 502 FQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ P + V++SN++A GRW+DV+ +R KM G+ K PG SWIE
Sbjct: 783 LELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 220/409 (53%), Gaps = 3/409 (0%)
Query: 11 ELSNVCKSLLRAKQLHACLLKTHLSQD-PFYATKLVRLYAATNDINSAYHVFDKMSTRSV 69
EL +++ + +QLH+ + KT S + F A KLV +Y ++ A VFD+M R+
Sbjct: 88 ELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTA 147
Query: 70 YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
+ WN+MI A+ + +A++L+ M + +F +++ACA D+ +H
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP-DLVLWNSLISGYGCSAAWDV 188
V G +ALVS Y+K + A R+F+G E D VLWNS++S Y S
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGL-DSDSHVGSLLV 247
+++F M + G P+ YT+ L S +G+ +H KS S+ +V + L+
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 248 SMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSI 307
+MY+RC M A R+ ++N D+VTW++LI GY Q +++ L FF +I K D +
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
+ +++A+ + +N+ G E+H YVI+HG +S+++V + LIDMYSKC + F M
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 368 PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
++++IS+ +VI+G + C EA +F + +K + D ++L A
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 167/416 (40%), Gaps = 38/416 (9%)
Query: 2 LTQIQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVF 61
+T I LSN LL +LHA ++K + L+ +Y+ N F
Sbjct: 389 MTSIIAASGRLSN----LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444
Query: 62 DKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLG 121
+M + + W ++I +A + A+ LFR + ++ D ++RA + +
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 504
Query: 122 MLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG 181
+++ +H + GL LD + + LV Y K + A RVF I D+V W S+IS
Sbjct: 505 IVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 182 CSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSH 241
+ +++F M G D L +L A S L G+ +H + G +
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623
Query: 242 VGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMER 301
+ +V MY+ C + SA VF I L+ ++++I+ Y G + + F K+ E
Sbjct: 624 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 683
Query: 302 KKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
D I +L Y H + L+D GFL
Sbjct: 684 VSPDHISFLALL-----------------YACSH---------AGLLD--EGRGFLKIME 715
Query: 362 CVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+ L P Y ++ LG C EAF F ++++ P A + ALL AC
Sbjct: 716 HEYELEPWPE--HYVCLVDMLGRANCVVEAFE-FVKMMKT--EPTAEVWCALLAAC 766
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 246 LVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
LV MY +C +D A +VF + + W+ +I Y GE L + + +E L
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
+L + A+ ++R G E+H +++ G S + +AL+ MY+K L +F
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 366 LMPER-NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
E+ + + +NS++S G + E +F + G AP++ T + L AC
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 425 EGREI 429
G+EI
Sbjct: 302 LGKEI 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 310 ATVLASIAQTANVRPGCEIHGYVIRH--GLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
A VL + V G ++H + + E D ++ L+ MY KCG L VF M
Sbjct: 84 AYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 368 PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
P+R ++N++I +G + A ++ + +G+ ++F ALL AC + G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 428 EIFQRM------KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGAL 481
E+ + F + A +V + +L A L E D + ++
Sbjct: 203 ELHSLLVKLGYHSTGFIVNA-------LVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 482 LSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDG 523
LS ++ G S + +++ PA N++ + +S + A DG
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTI-VSALTACDG 296
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (684), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 255/484 (52%), Gaps = 11/484 (2%)
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N +I++ + A+ + L + P T+ +I C L VH +
Sbjct: 50 NQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
+G D + L+ YS LG V A +VF+ + + +WN+L + + + +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSL----LCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
+ M +G D +T +L L G+ +H + G S ++ + LV
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 249 MYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK--KLDS 306
MY+R C+D A VF + ++V+WSA+I+ Y++ G+ + L FR+++ E K +S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 307 ILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRL 366
+ + +VL + A A + G IHGY++R GL+S + V SAL+ MY +CG L G VF
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 367 MPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG 426
M +R+++S+NS+IS G+HG +A ++F+ +L G +P TF ++LGAC H GLV EG
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 427 REIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCN 486
+ +F+ M + IK + EHY MV LLG A L+EA + Q + + G+LL C
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 487 SCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGL 545
GN ELAE +++LF P + V+L++IYA WD+VK ++ + GL+K+PG
Sbjct: 466 IHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGR 525
Query: 546 SWIE 549
W+E
Sbjct: 526 CWME 529
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 191/406 (47%), Gaps = 10/406 (2%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL A ++H +L QDPF ATKL+ +Y+ ++ A VFDK R++Y+WN++ R
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC-ADNFDLGML---RLVHGGAVAS 133
A L+ + + L+ M ++ D +T+ V++AC A + L + +H
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
G + LV Y++ G V A+ VF G+ ++V W+++I+ Y + ++ F
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 194 SSM--RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
M + P+ T+ +L A + L G+ +HG + GLDS V S LV+MY
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
RC ++ RVF + + D+V+W++LIS Y G +K + F +++ + +
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 312 VLASIAQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLM-PE 369
VL + + V G + + R HG++ ++ + ++D+ + L + + M E
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 370 RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLG 415
+ S++ +HG A R R+ L P A LL
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLF--ALEPKNAGNYVLLA 495
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/493 (31%), Positives = 268/493 (54%), Gaps = 18/493 (3%)
Query: 73 NSMIRAFALSQRFDNA-----VSLFRTMLGADIKPDNYT--------FACVIRACADNFD 119
N +IR L +R + + +S+ + ++ P Y+ +++ CA N
Sbjct: 17 NFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGA 76
Query: 120 LGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISG 179
+ + HG + L D + L++AYSK G V A +VF+G+ E LV WN++I
Sbjct: 77 VMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGL 136
Query: 180 YGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLG--GIADPSLLCIGQGLHGLSHKSGLD 237
Y + + +F MR G + +T++ +L G+ +L C + LH LS K+ +D
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC--KKLHCLSVKTCID 194
Query: 238 SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKL 297
+ +VG+ L+ +Y++C + A +VF S+ + VTWS++++GY Q +E+ LL +R+
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254
Query: 298 IMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL 357
+ + +++V+ + + A + G ++H + + G S+V V+S+ +DMY+KCG L
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 314
Query: 358 HFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+F + E+N+ +N++ISG H E +F+++ + G+ P+ TFS+LL C
Sbjct: 315 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Query: 418 CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAI 477
H GLV EGR F+ M+ + + HY MV +LG AG L EAY L +S+P +I
Sbjct: 375 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 434
Query: 478 LGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG 537
G+LL+ C N ELAE A+KLF+ P + V+LSNIYA + +W+++ R +
Sbjct: 435 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 494
Query: 538 -GLRKMPGLSWIE 549
++K+ G SWI+
Sbjct: 495 CDVKKVRGKSWID 507
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 184/400 (46%), Gaps = 33/400 (8%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+++ AK H +++ L D L+ Y+ + A VFD M RS+ WN+MI
Sbjct: 76 AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG 135
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ ++ A+ +F M K +T + V+ AC N D + +H +V + + L
Sbjct: 136 LYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDL 195
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+ +AL+ Y+K G++ +A +VF + + V W+S+++GY + ++ + ++ +
Sbjct: 196 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 255
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
+ + +TL+ ++ ++ + L G+ +H + KSG S+ V S V MY++C +
Sbjct: 256 RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLR 315
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
+Y +F + +L W+ +ISG+++ ++V++ F K+ + + + +++L+
Sbjct: 316 ESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG 375
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
T V G F + L P N++ Y+
Sbjct: 376 HTGLVEEGRR----------------------------FFKLMRTTYGLSP--NVVHYSC 405
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
++ LG G SEA+ + I P A+ + +LL +C
Sbjct: 406 MVDILGRAGLLSEAYELIKSI---PFDPTASIWGSLLASC 442
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 280/536 (52%), Gaps = 12/536 (2%)
Query: 25 LHACLLKTHLSQDPFYA----------TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
LHA ++K +P A L+ LYA + A +FD+M R V N
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
+ F ++ ++ L + MLG+ D+ T V+ C + +++H A+ SG
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
+ + L+++Y K G VF+G++ +++ ++ISG + + G+++FS
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS 245
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
MR P+ T L + + GQ +H L K G++S+ + S L+ MYS+C
Sbjct: 246 LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
++ A+ +F S + D V+ + ++ G +Q G E+ + FF +++ ++D+ +V+ VL
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
++ G ++H VI+ + V++ LI+MYSKCG L VFR MP+RN +S
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS 425
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+NS+I+ HG A ++++ + + P TF +LL AC H GL+++GRE+ MK
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
+ I+ R EHY ++ +LG AG L+EA + SLP D I ALL C+ G++E+
Sbjct: 486 EVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVG 545
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDD-VKNLRDKMTGGLRKMPGLSWIE 549
E A++LFQ P ++ ++++NIY+ G+W + K ++ G+ K G+S IE
Sbjct: 546 EYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIE 601
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 178/426 (41%), Gaps = 49/426 (11%)
Query: 20 LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAF 79
L K +HA + + ++ KL+ Y S VFD MS R+V ++I
Sbjct: 172 LVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGL 231
Query: 80 ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL---G 136
++ ++ + LF M + P++ T+ + AC+ G R+V G + + L G
Sbjct: 232 IENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS-----GSQRIVEGQQIHALLWKYG 286
Query: 137 LDAICC--SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
+++ C SAL+ YSK G + +A +F E D V ++ G + + + +Q F
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M G D ++ +LG + L +G+ LH L K ++ V + L++MYS+C
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCG 406
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
+ + VF + + V+W+++I+ +++ G L + ++ K + ++L
Sbjct: 407 DLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLH 466
Query: 315 SIAQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
+ + + G E+ + HG+E + + +IDM + G L
Sbjct: 467 ACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL---------------- 510
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG----REI 429
EA D + L PD + ALLGAC G G ++
Sbjct: 511 ---------------KEAKSFIDSL---PLKPDCKIWQALLGACSFHGDTEVGEYAAEQL 552
Query: 430 FQRMKD 435
FQ D
Sbjct: 553 FQTAPD 558
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 12 LSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL 71
+S + SL KQLH+ ++K S + F L+ +Y+ D+ + VF +M R+
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS 425
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML----RLVH 127
WNSMI AFA A+ L+ M ++KP + TF ++ AC+ +G++ L++
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACS---HVGLIDKGRELLN 482
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAW 186
G+ + ++ + GL+ EA + + +PD +W +L+ CS
Sbjct: 483 EMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG--ACSFHG 540
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
D + +++ +L T PD + L+ I
Sbjct: 541 DTEVGEYAAEQLFQTAPDSSSAHILIANI 569
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 121/284 (42%), Gaps = 7/284 (2%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+ ++ +Q+HA L K + + + L+ +Y+ I A+ +F+ + ++
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVIL 329
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
A + + A+ F ML A ++ D + V+ + LG+ + +H +
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS 389
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ + L++ YSK G + ++ VF + + + V WNS+I+ + ++++ M
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQG-LHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
+ +P T LL + L+ G+ L+ + G++ + + ++ M R
Sbjct: 450 TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGL 509
Query: 256 MDSAYRVFCSIS-NPDLVTWSALIS-----GYSQCGEHEKVLLF 293
+ A S+ PD W AL+ G ++ GE+ LF
Sbjct: 510 LKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 273/530 (51%), Gaps = 32/530 (6%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTM-------- 95
+++ Y ++ A +F+ M R V WN+M+ +A + D+A S+F M
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW 191
Query: 96 ---LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL------------DAI 140
L A ++ AC++ +N+ L + GG V + D +
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
+ +++ Y++ G + EA ++F+ D+ W +++SGY + + ++F M
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM---- 307
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
+ + +L G + + + L + + + + +++ Y++C + A
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST----WNTMITGYAQCGKISEAK 363
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+F + D V+W+A+I+GYSQ G + L F ++ E +L+ ++ L++ A
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
+ G ++HG +++ G E+ V +AL+ MY KCG + +F+ M ++I+S+N++I+
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
G HG A R F+ + +GL PD AT A+L AC H GLV++GR+ F M ++ +
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 441 ARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQK 500
+HY MV LLG AG LE+A+NL +++P D AI G LL GN+ELAET A K
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 501 LFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+F P ++ V+LSN+YA GRW DV LR +M G++K+PG SWIE
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 54/345 (15%)
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM-- 196
++ + ++S Y + G A ++F+ + E DLV WN +I GY + ++F M
Sbjct: 95 SVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPE 154
Query: 197 RLV---GTRPDGYTLAG-------LLGGIADPSLLCIGQGLHGLSHKSGLDS-----DSH 241
R V T GY G + + + + + L S ++ S
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 242 VGSLLVSM------YSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFR 295
LVS + + K + A + F S++ D+V+W+ +I+GY+Q G+ ++ R
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA----R 270
Query: 296 KLIMERKKLDSILVATVLASIAQTANVRPGCEIH----------------GYVIRHGLE- 338
+L E D +++ Q V E+ GYV +E
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEM 330
Query: 339 ----------SDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCA 388
+V + +I Y++CG + +F MP+R+ +S+ ++I+G G +
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 389 SEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
EA R+F ++ +G + ++FS+ L C + G+++ R+
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 142/342 (41%), Gaps = 56/342 (16%)
Query: 237 DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRK 296
DSD ++ +S Y R + A RVF + V+++ +ISGY + GE E RK
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFE----LARK 116
Query: 297 LIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGF 356
L E + D + ++ + N+ E+ + E DV + ++ Y++ G
Sbjct: 117 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGC 172
Query: 357 LHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF--------------------- 395
+ VF MPE+N +S+N+++S + EA +F
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 396 DRILEKGL------APDAATFSALLGACCHAGLVNEGREIFQR--MKDEFNIKARPEHYV 447
+I+E D +++ ++ +G ++E R++F ++D F A Y+
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 448 YMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPA 507
+EEA L +PE ++ A+L+ E+ A++LF P
Sbjct: 293 -------QNRMVEEARELFDKMPER-NEVSWNAMLAGYVQGERMEM----AKELFDVMPC 340
Query: 508 DN--AFKVMLSNIYAGDGRWDDVKNLRDKMTGGLRKMPGLSW 547
N + M++ YA G+ + KNL DKM K +SW
Sbjct: 341 RNVSTWNTMITG-YAQCGKISEAKNLFDKMP----KRDPVSW 377
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
KQLH L+K F L+ +Y I A +F +M+ + + WN+MI ++
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN--FDLGMLRLVHGGAVASGLGLDA 139
+ A+ F +M +KPD+ T V+ AC+ D G + + G+ ++
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR-QYFYTMTQDYGVMPNS 546
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLI 177
+ +V + GL+ +A+ + + EPD +W +L+
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/510 (30%), Positives = 261/510 (51%), Gaps = 5/510 (0%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD-I 100
+ +V++Y + A VFD+M + LWN+MI + ++ + ++ +FR ++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 101 KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANR 160
+ D T ++ A A+ +L + +H A +G + +S YSK G + +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
+F +PD+V +N++I GY + ++ + +F + L G R TL L +
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL---VPVSGH 334
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
L + +HG KS S + V + L ++YS+ ++SA ++F L +W+A+ISG
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
Y+Q G E + FR++ + + + +L++ AQ + G +H V ES
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+ VS+ALI MY+KCG + +F LM ++N +++N++ISG GLHG EA +F +L
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
G+ P TF +L AC HAGLV EG EIF M + + +HY MV +LG AG L+
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 461 EAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYA 520
A +++ ++ LL C ++ LA TV++KLF+ +P + + V+LSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 521 GDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
D + +R L K PG + IE
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 214/406 (52%), Gaps = 5/406 (1%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q HA ++ D TKL + + I A +F + V+L+N ++R F++++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 84 RFDNAVSLFRTMLGA-DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+++S+F + + D+KP++ T+A I A + D R++HG AV G + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM-RLVGT 201
S +V Y K V +A +VF+ + E D +LWN++ISGY + + +Q+F + T
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
R D TL +L +A+ L +G +H L+ K+G S +V + +S+YS+C +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
+F PD+V ++A+I GY+ GE E L F++L++ +L S +T+++ + + +
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS---STLVSLVPVSGH 334
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
+ IHGY ++ S VS+AL +YSK + +F PE+++ S+N++ISG
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
+G +A +F + + +P+ T + +L AC G ++ G+
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 2/256 (0%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
+H LK++ +T L +Y+ N+I SA +FD+ +S+ WN+MI + +
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
++A+SLFR M ++ P+ T C++ ACA L + + VH ++ +A
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
L+ Y+K G + EA R+F+ + + + V WN++ISGYG + +F M G P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 205 GYTLAGLLGGIADPSLLCIGQGL-HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
T +L + L+ G + + + H+ G + + +V + R + A +
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 264 CSIS-NPDLVTWSALI 278
++S P W L+
Sbjct: 581 EAMSIEPGSSVWETLL 596
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 32/209 (15%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K +H + T + +T L+ +YA I A +FD M+ ++ WN+MI + L
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ A+++F ML + I P TF CV+ AC+ H G V G D I
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACS-----------HAGLVKEG---DEIFN 545
Query: 143 SA---------------LVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAW 186
S +V + G + A + ++ EP +W +L+ C
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG--ACRIHK 603
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
D + S +L PD LL I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNI 632
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 288/547 (52%), Gaps = 17/547 (3%)
Query: 12 LSNVCKSLLRAKQLHACLLKT-HLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVY 70
L ++ K Q+HA ++ T +L + L+ +I+ A VFD++ R V
Sbjct: 23 LQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVS 82
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
++NSMI ++ + D + L+ M+ I+PD+ TF I+AC L V A
Sbjct: 83 VYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKA 142
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
V G D CS++++ Y K G + EA +F +A+ D++ W ++++G+ + +
Sbjct: 143 VDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAV 202
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+ + M+ G D + GLL D +G+ +HG +++GL + V + LV MY
Sbjct: 203 EFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMY 262
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL----DS 306
++ ++ A RVF + V+W +LISG++Q G K + ++E + L D
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF----EAVVEMQSLGFQPDL 318
Query: 307 ILVATVLASIAQTANVRPGCEIHGYVI-RHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
+ + VL + +Q +++ G +H Y++ RH L D ++AL+DMYSKCG L +F
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCYILKRHVL--DRVTATALMDMYSKCGALSSSREIFE 376
Query: 366 LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+ ++++ +N++IS G+HG E +F ++ E + PD ATF++LL A H+GLV +
Sbjct: 377 HVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQ 436
Query: 426 GREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKA--ILGALLS 483
G+ F M +++ I+ +HYV ++ LL AG +EEA ++ S E +D A I ALLS
Sbjct: 437 GQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINS--EKLDNALPIWVALLS 494
Query: 484 CCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKM 542
C + N + + A K+ Q NP + ++SN +A +W +V +R M G + K+
Sbjct: 495 GCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKV 554
Query: 543 PGLSWIE 549
PG S IE
Sbjct: 555 PGYSAIE 561
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 264/492 (53%), Gaps = 12/492 (2%)
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHG 128
V+ WNS+I A S A+ F +M + P +F C I+AC+ FD+ + H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDV 188
A G D SAL+ YS G + +A +VF+ I + ++V W S+I GY +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 189 GMQMFSSMRLVGTRPDGYTL----AGLLGGIADPSLLC---IGQGLHGLSHKSGLDSDSH 241
+ +F + LV D + GL+ I+ S + + + +H K G D
Sbjct: 161 AVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 242 VGSLLVSMYSRCK--CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
VG+ L+ Y++ + A ++F I + D V++++++S Y+Q G + FR+L+
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 300 ERK-KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
+ ++I ++TVL +++ + +R G IH VIR GLE DV V +++IDMY KCG +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 359 FGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
F M +N+ S+ ++I+G G+HG A++A +F +++ G+ P+ TF ++L AC
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 419 HAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAIL 478
HAGL EG F MK F ++ EHY MV LLG AG L++AY+L Q + D I
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 479 GALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG- 537
+LL+ C N ELAE +LF+ + ++ + ++LS+IYA GRW DV+ +R M
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 538 GLRKMPGLSWIE 549
GL K PG S +E
Sbjct: 520 GLVKPPGFSLLE 531
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 184/416 (44%), Gaps = 58/416 (13%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
+ KQ H D F ++ L+ +Y+ + A VFD++ R++ W SMIR
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTF------ACVIRACADNFDLGMLRLVHGGAVA 132
+ L+ +AVSLF+ +L + D+ F VI AC+ G+ +H +
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 133 SGLGLDAICCSALVSAYSK--LGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
G + L+ AY+K G V A ++F+ I + D V +NS++S Y S +
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 191 QMFSSMRLVGTRP---DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
++F RLV + + TL+ +L ++ L IG+ +H + GL+ D VG+ ++
Sbjct: 272 EVFR--RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 248 SMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSI 307
MY +C +++A + F + N ++ +W+A+I+GY G K L F +I + + I
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 308 LVATVLASIAQTANVRPGCEIHGYVI------RHGLESDVKVSSALIDMYSKCGFLHFGI 361
+VLA+ + G + G+ R G+E ++ ++D+ + GFL
Sbjct: 390 TFVSVLAACSHA-----GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ--- 441
Query: 362 CVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+ +D I + PD+ +S+LL AC
Sbjct: 442 -------------------------------KAYDLIQRMKMKPDSIIWSSLLAAC 466
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 139/278 (50%), Gaps = 9/278 (3%)
Query: 165 IAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
+ + D+ WNS+I+ S + FSSMR + P + + + + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQC 284
+ H + G SD V S L+ MYS C ++ A +VF I ++V+W+++I GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 285 GEHEKVLLFFRKLIMERKK------LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
G + F+ L+++ LDS+ + +V+++ ++ IH +VI+ G +
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 339 SDVKVSSALIDMYSKCGFLHFGIC--VFRLMPERNIISYNSVISGLGLHGCASEAFRMFD 396
V V + L+D Y+K G + +F + +++ +SYNS++S G ++EAF +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 397 RILE-KGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
R+++ K + +A T S +L A H+G + G+ I ++
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K +H +++ L D T ++ +Y + +A FD+M ++V W +MI + +
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD-NFDLGMLRLVHG--GAVASGLGLDA 139
A+ LF M+ + ++P+ TF V+ AC+ + R + G GL+
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
C +V + G + +A + + +PD ++W+SL++ C +V + S RL
Sbjct: 427 YGC--MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA--ACRIHKNVELAEISVARL 482
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 295/549 (53%), Gaps = 8/549 (1%)
Query: 4 QIQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDK 63
Q Q L ++L + C+ + ++H ++KT L +D F +KL+ +++ DI A +F+
Sbjct: 27 QCQKLINDLRS-CRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEH 84
Query: 64 MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML 123
+S +++++N+MIR +++S + A S+F + + D ++F +++C+ + +
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIG 144
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP-DLVLWNSLISGYGC 182
+HG A+ SG + +AL+ Y G + +A +VF+ + + D V +++L++GY
Sbjct: 145 EGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ 204
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ + + +F MR + TL L I+D L + H L K GLD D H+
Sbjct: 205 VSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHL 264
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ L+ MY + + SA R+F D+VTW+ +I Y++ G E+ + R++ E+
Sbjct: 265 ITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKM 324
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
K +S +L+S A + G + + + D + +AL+DMY+K G L +
Sbjct: 325 KPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVE 384
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG--LAPDAATFSALLGACCHA 420
+F M ++++ S+ ++ISG G HG A EA +F+++ E+ + P+ TF +L AC H
Sbjct: 385 IFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHG 444
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGA 480
GLV EG F+RM + ++ + EHY +V LLG AG+LEEAY L ++LP D A
Sbjct: 445 GLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRA 504
Query: 481 LLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGLR 540
LL+ C GN++L E+V +L + A ++L+ +A G + K+L +++ G R
Sbjct: 505 LLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE--KSLDNELNKG-R 561
Query: 541 KMPGLSWIE 549
K G S IE
Sbjct: 562 KEAGYSAIE 570
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 270/534 (50%), Gaps = 11/534 (2%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA-L 81
KQLHA ++K S L+ +Y N ++ A VF + + + W+S+I F+ L
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 82 SQRFDNAVSLFRTMLGADI-KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
F+ A+S + ML + P+ Y F ++AC+ +HG + S L +AI
Sbjct: 248 GFEFE-ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
+L Y++ G ++ A RVF+ I PD WN +I+G + D + +FS MR G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
PD +L LL P L G +H K G +D V + L++MY+ C + +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 261 RVFCSI-SNPDLVTWSALISGYSQCGEHEK---VLLFFRKLIMERKKLDSILVATVLASI 316
+F +N D V+W+ +++ C +HE+ +L F+ +++ + D I + +L
Sbjct: 427 NLFEDFRNNADSVSWNTILTA---CLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
+ ++++ G ++H Y ++ GL + + + LIDMY+KCG L +F M R+++S++
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
++I G G EA +F + G+ P+ TF +L AC H GLV EG +++ M+ E
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
I EH +V LL AG L EA + D + LLS C + GN LA+
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A+ + + +P ++ V+L +++A G W++ LR M ++K+PG SWIE
Sbjct: 664 AAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIE 717
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 221/462 (47%), Gaps = 17/462 (3%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+SL + +++H +L ++ D ++ +Y + A VFD M R++ + S+I
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVI 140
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
++ + + A+ L+ ML D+ PD + F +I+ACA + D+G+ + +H +
Sbjct: 141 TGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
I +AL++ Y + + +A+RVF GI DL+ W+S+I+G+ + M
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 197 RLVGT-RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
G P+ Y L + G +HGL KS L ++ G L MY+RC
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF 320
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
++SA RVF I PD +W+ +I+G + G ++ + F ++ D+I + ++L +
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE-RN--- 371
+ + G +IH Y+I+ G +D+ V ++L+ MY+ C L+ C F L + RN
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY---CCFNLFEDFRNNAD 437
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
+S+N++++ H E R+F +L PD T LL C + G ++
Sbjct: 438 SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 497
Query: 432 RMKDEFNIKA--RPEHYVY--MVKLLGSAGELEEAYNLTQSL 469
+++K PE ++ ++ + G L +A + S+
Sbjct: 498 -----YSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL Q+H LKT L+ + F L+ +YA + A +FD M R V W+++I
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+A S + A+ LF+ M A I+P++ TF V+ AC+ H G V GL L
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS-----------HVGLVEEGLKL 596
Query: 138 DAIC------------CSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSA 184
A CS +V ++ G ++EA R + + EPD+V+W +L+S C
Sbjct: 597 YATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLS--ACKT 654
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
+V + ++ ++ P T LL
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLL 682
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 271/511 (53%), Gaps = 26/511 (5%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
++ +Y A +F + R + WNSMI AF+ + A +LF+ ++ ++
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCS 493
Query: 104 NYTFACV--IRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRV 161
++ + V I D+ D L+ G +V L L SA+ +L + E
Sbjct: 494 KFSLSTVLAILTSCDSSD----SLIFGKSVHCWLQK----LGDLTSAFLRLETMSETR-- 543
Query: 162 FNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT-RPDGYTLAGLLGGIADPSL 220
DL WNS+ISG S ++ F +M G R D TL G + + L
Sbjct: 544 -------DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGL 596
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
+ G+ HGL+ KS + D+ + + L++MY RCK ++SA +VF IS+P+L +W+ +IS
Sbjct: 597 VLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISA 656
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
SQ +V FR L +E + I +L++ Q + G + H ++IR G +++
Sbjct: 657 LSQNKAGREVFQLFRNLKLEP---NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQAN 713
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
VS+AL+DMYS CG L G+ VFR +I ++NSVIS G HG +A +F +
Sbjct: 714 PFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSS 773
Query: 401 KG-LAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGEL 459
+ P+ ++F +LL AC H+G ++EG +++M+++F +K EH V++V +LG AG+L
Sbjct: 774 NSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKL 833
Query: 460 EEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIY 519
EAY + EP + GALLS CN G+++L + VA+ LF+ P + ++ + L+N Y
Sbjct: 834 REAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTY 893
Query: 520 AGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
G G W++ LR + L+K+PG S I+
Sbjct: 894 VGLGGWEEAVRLRKMVEDNALKKLPGYSVID 924
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 234/474 (49%), Gaps = 26/474 (5%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+ +H LK L QD ++KL+ Y T ++ S+ +FD++ + V +WNSMI A +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
R+ AV LF M+ + D+ T A + ++H A+ +GL D+ C
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+AL++ Y+K + A VF + D+V WN++++ + +Q F SM G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSH--VGSLLVSMYSRCKCMDSAY 260
D T + ++ + L +G+ LHGL KSG ++H VG+ ++SMYS+C ++A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKL-IMERKKLDSILVATVLASIAQT 319
VF + D+++ +A+++G++ G E+ ++ +++ + D V ++ +
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 320 ANVRPGCEIHGYVIRHGLESD-VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
+ R G +HGY +R ++S ++V +++IDMY KCG +F+ R+++S+NS+
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAP--DAATFSALLGACCHAGLVNEGREIFQRMKDE 436
IS +G +A +F ++ + +T A+L +C + + G+ +
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV------- 519
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGN 490
+ ++ KL G+L A+ +++ E D +++S C S G+
Sbjct: 520 ---------HCWLQKL----GDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 197/414 (47%), Gaps = 25/414 (6%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
+ LH ++T L D L+ LYA +++SA VF M R + WN+++
Sbjct: 206 KCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCL 265
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
+ ++ F++M G+ + D TF+CVI AC+ +L + +HG + SG +A
Sbjct: 266 ANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAH 325
Query: 141 CC--SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
++++S YSK G A VF + D++ N++++G+ + ++ + + M+
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQS 385
Query: 199 VGT-RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS-HVGSLLVSMYSRCKCM 256
V +PD T+ + D S G+ +HG + + + S + V + ++ MY +C
Sbjct: 386 VDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLT 445
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMER--KKLDSILVATVLA 314
A +F + ++ DLV+W+++IS +SQ G K F++++ E K V +L
Sbjct: 446 TQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILT 505
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
S + ++ G +H ++ + G ++SA + + + + R++ S
Sbjct: 506 SCDSSDSLIFGKSVHCWLQKLG-----DLTSAFLRLET-------------MSETRDLTS 547
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKG-LAPDAATFSALLGACCHAGLVNEGR 427
+NSVISG G E+ R F + +G + D T + A + GLV +GR
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 15/285 (5%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
+L+ + H +K+ D L+ +Y DI SA VF +S ++ WN +I A
Sbjct: 597 VLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISA 656
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
+ ++ LFR + ++P+ TF ++ A H + G +
Sbjct: 657 LSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQAN 713
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ALV YS G++ +VF + WNS+IS +G + M++F +
Sbjct: 714 PFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSS 773
Query: 199 VGT-RPDGYTLAGLLGGIADPSLLCIGQGL---HGLSHKSGLDSDSHVGSLLVSMYSRCK 254
P+ + LL + I +GL + K G+ + +V M R
Sbjct: 774 NSEMEPNKSSFISLLSACSHSGF--IDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAG 831
Query: 255 CMDSAYRVFCSISNPDLV-TWSALIS-----GYSQCGEHEKVLLF 293
+ AY I P W AL+S G ++ G+ +LF
Sbjct: 832 KLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 876
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 286/539 (53%), Gaps = 13/539 (2%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C +L + KQLHA +++ +L +D A KL+ + N A VF+++ +V+L NS+
Sbjct: 29 CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSL 88
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
IRA A + + A +F M + DN+T+ +++AC+ L +++++H GL
Sbjct: 89 IRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGL 148
Query: 136 GLDAICCSALVSAYSKLGL--VHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
D +AL+ YS+ G V +A ++F ++E D V WNS++ G + ++F
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
M + D + +L G A C + + ++ S +V YS+
Sbjct: 209 DEM----PQRDLISWNTMLDGYAR----CREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 254 KCMDSAYRVFCSISNP--DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
M+ A +F + P ++VTW+ +I+GY++ G ++ +++ K D+ V +
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERN 371
+LA+ ++ + G IH + R L S+ V +AL+DMY+KCG L VF +P+++
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
++S+N+++ GLG+HG EA +F R+ +G+ PD TF A+L +C HAGL++EG + F
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 432 RMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNS 491
M+ +++ + EHY +V LLG G L+EA + Q++P + I GALL C
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 492 ELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
++A+ V L + +P D +LSNIYA W+ V ++R KM G+ K G S +E
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI 372
L + + AN+ ++H +IR L D+ ++ LI S C + + VF + E N+
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 373 ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
NS+I + +AF +F + GL D T+ LL AC
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 266/521 (51%), Gaps = 7/521 (1%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C + + + +H K+ L D L+ Y+ ++ SA +F +M +S WN+M
Sbjct: 164 CGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTM 223
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
I A++ S + A+++F+ M +++ T ++ A + L H V G+
Sbjct: 224 IGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGM 277
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
D ++LV AYS+ G + A R++ + +V S++S Y D+ + FS
Sbjct: 278 VNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 337
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
R + + D L G+L G S + IG LHG + KSGL + + V + L++MYS+
Sbjct: 338 TRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDD 397
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL-DSILVATVLA 314
+++ +F + L++W+++ISG Q G F ++++ L D+I +A++LA
Sbjct: 398 VETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLA 457
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+Q + G E+HGY +R+ E++ V +ALIDMY+KCG VF+ + +
Sbjct: 458 GCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT 517
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+NS+ISG L G A + + EKGL PD TF +L AC H G V+EG+ F+ M
Sbjct: 518 WNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMI 577
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
EF I +HY MV LLG A EA L + D A+ GALLS C E+
Sbjct: 578 KEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVG 637
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
E VA+K+F + + V++SN+YA + WDDV +R+ M
Sbjct: 638 EYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMM 678
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 226/457 (49%), Gaps = 14/457 (3%)
Query: 20 LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAF 79
L+ +Q+ L K+ L + + T L+ LY + SA +FD+M R +WN++I +
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 80 ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
+ + +A LF ML P T ++ C + R VHG A SGL LD+
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
+AL+S YSK + A +F + + V WN++I Y S + + +F +M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
T+ LL + LH L K G+ +D V + LV YSRC C+ SA
Sbjct: 247 NVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
R++ S +V ++++S Y++ G+ + +++F K K+D++ + +L ++
Sbjct: 301 ERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKS 360
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
+++ G +HGY I+ GL + V + LI MYSK + + +F + E +IS+NSVI
Sbjct: 361 SHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVI 420
Query: 380 SGLGLHGCASEAFRMFDR-ILEKGLAPDAATFSALLGACCHAGLVNEGREIF-QRMKDEF 437
SG G AS AF +F + +L GL PDA T ++LL C +N G+E+ +++ F
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF 480
Query: 438 NIKARPEHYV--YMVKLLGSAGELEEAYNLTQSLPEP 472
E++V ++ + G +A ++ +S+ P
Sbjct: 481 ----ENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 180/365 (49%), Gaps = 8/365 (2%)
Query: 67 RSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRL- 125
R + ++S++++ + + +++FR +L + + P+++T + ++A +F+ L++
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 126 -VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA 184
V SGL ++L++ Y K G V A +F+ + E D V+WN+LI GY +
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
++F M G P TL LL + G+ +HG++ KSGL+ DS V +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
L+S YS+C + SA +F + + V+W+ +I YSQ G E+ + F+ + + ++
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
+ + +L++ + P +H V++ G+ +D+ V ++L+ YS+CG L ++
Sbjct: 251 SPVTIINLLSA---HVSHEP---LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
+ +I+ S++S G A F + + + DA +L C + ++
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 425 EGREI 429
G +
Sbjct: 365 IGMSL 369
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 184/428 (42%), Gaps = 48/428 (11%)
Query: 14 NVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWN 73
N+ + + + LH ++K + D T LV Y+ + SA ++ S+
Sbjct: 257 NLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLT 316
Query: 74 SMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC--ADNFDLGMLRLVHGGAV 131
S++ +A D AV F +K D ++ C + + D+GM +HG A+
Sbjct: 317 SIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS--LHGYAI 374
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
SGL + + L++ YSK V +F + E L+ WNS+ISG S +
Sbjct: 375 KSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFE 434
Query: 192 MFSSMRLV-GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+F M L G PD T+A LL G + L +G+ LHG + ++ ++++ V + L+ MY
Sbjct: 435 VFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMY 494
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
++C A VF SI P TW+++ISGYS G + L + ++ + K D I
Sbjct: 495 AKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFL 554
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
VL++ HG GF+ G FR M +
Sbjct: 555 GVLSA-----------------CNHG------------------GFVDEGKICFRAMIKE 579
Query: 371 NIIS-----YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
IS Y ++ LG +EA + I + + PD+A + ALL AC +
Sbjct: 580 FGISPTLQHYALMVGLLGRACLFTEALYL---IWKMDIKPDSAVWGALLSACIIHRELEV 636
Query: 426 GREIFQRM 433
G + ++M
Sbjct: 637 GEYVARKM 644
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 249/473 (52%), Gaps = 6/473 (1%)
Query: 82 SQRFDNAVSLFRT----MLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
S +F + L RT + G+ I D + +++ C L R+VH + S
Sbjct: 34 SLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRH 93
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
D + + L++ Y+K G + EA +VF + + D V W +LISGY + F+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G P+ +TL+ ++ A C G LHG K G DS+ HVGS L+ +Y+R MD
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
A VF ++ + + V+W+ALI+G+++ EK L F+ ++ + + A++ + +
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
T + G +H Y+I+ G + + L+DMY+K G +H +F + +R+++S+NS
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+++ HG EA F+ + G+ P+ +F ++L AC H+GL++EG ++ MK +
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 392
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
I HYV +V LLG AG+L A + +P AI ALL+ C N+EL
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
A+ +F+ +P D V+L NIYA GRW+D +R KM G++K P SW+E
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 198/432 (45%), Gaps = 5/432 (1%)
Query: 14 NVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWN 73
V K L++ + +HA +L++ D L+ +YA + A VF+KM R W
Sbjct: 71 TVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWT 130
Query: 74 SMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS 133
++I ++ R +A+ F ML P+ +T + VI+A A +HG V
Sbjct: 131 TLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
G + SAL+ Y++ GL+ +A VF+ + + V WN+LI+G+ + + +++F
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
M G RP ++ A L G + L G+ +H KSG + G+ L+ MY++
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
+ A ++F ++ D+V+W++L++ Y+Q G ++ + +F ++ + + I +VL
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL 370
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNI 372
+ + + + G + + + G+ + ++D+ + G L+ + MP E
Sbjct: 371 TACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTA 430
Query: 373 ISYNSVISGLGLHGCASEAFRMFDRILEKGLAP-DAATFSALLGACCHAGLVNEGREIFQ 431
+ ++++ +H + + E L P D L G N+ + +
Sbjct: 431 AIWKALLNACRMHKNTELGAYAAEHVFE--LDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 432 RMKDEFNIKARP 443
+MK E +K P
Sbjct: 489 KMK-ESGVKKEP 499
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 293/576 (50%), Gaps = 46/576 (7%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAAT--NDINSAYHVFDKMSTR-SVYLW 72
C S + KQ+ A +++ +L D F ++L+ A T +++ A +F + +V+++
Sbjct: 44 CNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVY 103
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N+MI A + S+ + L+ +M+ + PD TF +++A + L ++ +H +
Sbjct: 104 NTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSF---LSEVKQIHCHIIV 158
Query: 133 SG-LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
SG L L ++LV Y +LG A +VF + PD+ +N +I GY ++
Sbjct: 159 SGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALK 218
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG--LDSDSHVGSLLVSM 249
++ M G PD YT+ LL S + +G+G+HG + G S+ + + L+ M
Sbjct: 219 LYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDM 278
Query: 250 YSRCKC-------------------------------MDSAYRVFCSISNPDLVTWSALI 278
Y +CK M++A VF + DLV+W++L+
Sbjct: 279 YFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLL 338
Query: 279 SGYSQCGEHEKVL--LFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG 336
GYS+ G ++ + LF+ I+E+ K D + + ++++ A + G +HG VIR
Sbjct: 339 FGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQ 398
Query: 337 LESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFD 396
L+ D +SSALIDMY KCG + VF+ E+++ + S+I+GL HG +A ++F
Sbjct: 399 LKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFG 458
Query: 397 RILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSA 456
R+ E+G+ P+ T A+L AC H+GLV EG +F MKD+F EHY +V LL A
Sbjct: 459 RMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRA 518
Query: 457 GELEEAYNLTQ-SLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVML 515
G +EEA ++ Q +P +++ G++LS C + E AE +L + P V+L
Sbjct: 519 GRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLL 578
Query: 516 SNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIEG 550
SNIYA GRW R+ M G++K G S + G
Sbjct: 579 SNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVG 614
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 283/541 (52%), Gaps = 19/541 (3%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDK--MSTRSVYLWNSM 75
SL KQ+H+ ++K L+ +Y + A VF++ ++ R +N +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
I A +R D ++ +FR ML A ++P + TF V+ +C+ M VHG A+ +G
Sbjct: 264 IDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGY 319
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
+ +A ++ YS A++VF + E DLV WN++IS Y + M ++
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
M ++G +PD +T LL D +L + + K GL S + + L+S YS+
Sbjct: 380 MHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQ 436
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL--DSILVATVL 313
++ A +F +L++W+A+ISG+ G + L F L+ ++ D+ ++T+L
Sbjct: 437 IEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLL 496
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
+ T+++ G + H YV+RHG + + +ALI+MYS+CG + + VF M E++++
Sbjct: 497 SICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVV 556
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKG-LAPDAATFSALLGACCHAGLVNEGREIFQR 432
S+NS+IS HG A + + ++G + PDAATFSA+L AC HAGLV EG EIF
Sbjct: 557 SWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNS 616
Query: 433 MKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLT----QSLPEPVDKAILGALLSCCNSC 488
M + + +H+ +V LLG AG L+EA +L +++ VD + AL S C +
Sbjct: 617 MVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD--VWWALFSACAAH 674
Query: 489 GNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSW 547
G+ +L + VA+ L + D + V LSNIYAG G W + + R + G K G SW
Sbjct: 675 GDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSW 734
Query: 548 I 548
+
Sbjct: 735 M 735
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 236/528 (44%), Gaps = 60/528 (11%)
Query: 9 HSELSNVCKSLLRAKQLHACLLKT--HLSQDPFYA-TKLVRLYAATNDINSAYHVFDKMS 65
HS +SN SL A L K + + Y+ T L+ DI A+ VFDKM
Sbjct: 91 HSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMP 150
Query: 66 TRS-VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLR 124
R V +WN+MI S + +V LFR M ++ D + FA ++ C D L +
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGK 209
Query: 125 LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF--NGIAEPDLVLWNSLISGYGC 182
VH + +G + + +AL++ Y +V +A VF +A D V +N +I G
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA- 268
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
D + +F M RP T ++G S +G +HGL+ K+G + + V
Sbjct: 269 GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLV 325
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ ++MYS + +A++VF S+ DLVTW+ +IS Y+Q + + ++++ +
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
K D ++LA+ + ++ + +I+ GL S +++S+ALI YSK G +
Sbjct: 386 KPDEFTFGSLLAT---SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG--LAPDAATFSALLGAC--- 417
+F +N+IS+N++ISG +G E F +LE + PDA T S LL C
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVST 502
Query: 418 --------CHAGLVNEGR------------------------EIFQRMKDEFNIKARPEH 445
HA ++ G+ E+F +M ++ +
Sbjct: 503 SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVS----- 557
Query: 446 YVYMVKLLGSAGELEEAYNLTQSLPEP----VDKAILGALLSCCNSCG 489
+ ++ GE E A N +++ + D A A+LS C+ G
Sbjct: 558 WNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 182/413 (44%), Gaps = 48/413 (11%)
Query: 87 NAVSLFRTMLG-ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSAL 145
NA+ LF + ++PD Y+ + I D VH A+ SGL + + L
Sbjct: 39 NALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTL 98
Query: 146 VSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISG-------------------------- 179
+S Y +LG + + F+ I EPD+ W +L+S
Sbjct: 99 LSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIW 158
Query: 180 ----YGC--SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHK 233
GC S + +++F M +G R D + A +L + D L G+ +H L K
Sbjct: 159 NAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVIK 217
Query: 234 SGLDSDSHVGSLLVSMYSRCKCMDSAYRVF--CSISNPDLVTWSALISGYSQCGEHEKVL 291
+G S V + L++MY C+ + A VF ++ D VT++ +I G + E L
Sbjct: 218 AGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDES-L 276
Query: 292 LFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMY 351
L FRK++ + + +V+ S + A G ++HG I+ G E VS+A + MY
Sbjct: 277 LVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMY 333
Query: 352 SKCGFLHFGIC--VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAAT 409
S F FG VF + E++++++N++IS A ++ R+ G+ PD T
Sbjct: 334 S--SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 410 FSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEA 462
F +LL ++ E+ Q +F + ++ E ++ G++E+A
Sbjct: 392 FGSLLATSLDLDVL----EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 271/534 (50%), Gaps = 10/534 (1%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K +H+ + + + D + T LV YA ++ A VFD+M R + WN+MI F+L
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 83 QRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ + LF M D + P+ T + A L + VHG G D +
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY----GCSAAWDVGMQMFSSMR 197
+ ++ Y+K + A RVF+ + + V W+++I GY A +V QM +
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
+ P L +L G A L G+ +H + K+G D V + ++S Y++ +
Sbjct: 303 VAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
A+R F I D++++++LI+G E+ F ++ + D + VL + +
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
A + G HGY + HG + + +AL+DMY+KCG L VF M +R+I+S+N+
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM-KDE 436
++ G G+HG EA +F+ + E G+ PD T A+L AC H+GLV+EG+++F M + +
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
FN+ R +HY M LL AG L+EAY+ +P D +LG LLS C + N+EL
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNE 600
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLR-DKMTGGLRKMPGLSWIE 549
V++K+ Q+ V+LSN Y+ RW+D +R + GL K PG SW++
Sbjct: 601 VSKKM-QSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 268/566 (47%), Gaps = 52/566 (9%)
Query: 17 KSLLRAKQLHACLLKTHLS-QDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV--YLWN 73
++L+ + +H LLK L+ L RLYA+ N++ A HVFD++ + W+
Sbjct: 13 RNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWD 72
Query: 74 SMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS 133
MIRA+A + + A+ L+ ML + ++P YT+ V++ACA + +L+H S
Sbjct: 73 LMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCS 132
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
D C+ALV Y+K G + A +VF+ + + D+V WN++ISG+ + +F
Sbjct: 133 DFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLF 192
Query: 194 SSMRLV-GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
MR + G P+ T+ G+ + L G+ +HG + G +D V + ++ +Y++
Sbjct: 193 LDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK 252
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVL----LFFRKLIMERKKL-DSI 307
KC+ A RVF + VTWSA+I GY E+E + +FF+ L+ + + +
Sbjct: 253 SKCIIYARRVFDLDFKKNEVTWSAMIGGYV---ENEMIKEAGEVFFQMLVNDNVAMVTPV 309
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
+ +L A+ ++ G +H Y ++ G D+ V + +I Y+K G L F +
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 368 PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
+++ISYNS+I+G ++ E+FR+F + G+ PD T +L AC H + G
Sbjct: 370 GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 428 -------------------------------EIFQRMKDEFNIKARPEHYVYMVKLLGSA 456
++ +R+ D + K + M+ G
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIH 488
Query: 457 GELEEAYNLTQSLPEP---VDKAILGALLSCCNSCG----NSELAETVAQKLFQNNPADN 509
G +EA +L S+ E D+ L A+LS C+ G +L ++++ F P +
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 510 AFKVMLSNIYAGDGRWDDVKNLRDKM 535
+ M +++ A G D+ + +KM
Sbjct: 549 HYNCM-TDLLARAGYLDEAYDFVNKM 573
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 275/554 (49%), Gaps = 21/554 (3%)
Query: 11 ELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVY 70
+LS L KQ H ++K + F KL++ Y + + A +FD+M R++
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 71 LWNSMI-----RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRL 125
WN +I R + R +L D+ D+ +F +IR C D+ ++
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAA 185
+H V GL ++LV Y K GL+ EA RVF + + DLVLWN+L+S Y +
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 186 WDVGMQMFSSMRLVGT-----RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
D + F ++L+G+ R D +T + LL G+ +H + K D
Sbjct: 224 ID---EAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDI 276
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
V + L++MY++ + A F S+ ++V+W+A+I G++Q GE + + F ++++E
Sbjct: 277 PVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
+ D + A+VL+S A+ + + ++ V + G + V+++LI YS+ G L
Sbjct: 337 NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA 396
Query: 361 ICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
+ F + E +++S+ SVI L HG A E+ +MF+ +L+K L PD TF +L AC H
Sbjct: 397 LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHG 455
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGA 480
GLV EG F+RM + + I+A EHY ++ LLG AG ++EA ++ S+P L A
Sbjct: 456 GLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAA 515
Query: 481 LLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGLR 540
CN E + A+KL + P +LSN Y +G W+ LR +
Sbjct: 516 FTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCY 575
Query: 541 --KMPGLSWIEGSY 552
K PG SW+ G Y
Sbjct: 576 NPKTPGCSWL-GDY 588
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 13/285 (4%)
Query: 10 SELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV 69
S L + C+ + + KQ+HA L K D AT L+ +YA +N ++ A F+ M R+V
Sbjct: 249 SSLLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNV 307
Query: 70 YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
WN+MI FA + A+ LF ML +++PD TFA V+ +CA + ++ V
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAM 367
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVG 189
G ++L+S+YS+ G + EA F+ I EPDLV W S+I +
Sbjct: 368 VTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEES 427
Query: 190 MQMFSSMRLVGTRPDGYTLAGLL-----GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
+QMF SM L +PD T +L GG+ L C + ++ ++++ +
Sbjct: 428 LQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKR----MTEFYKIEAEDEHYT 482
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEK 289
L+ + R +D A V S+ P + AL + C HEK
Sbjct: 483 CLIDLLGRAGFIDEASDVLNSM--PTEPSTHALAAFTGGCNIHEK 525
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/617 (28%), Positives = 290/617 (47%), Gaps = 79/617 (12%)
Query: 12 LSNVCKSLLRAKQLHA-CLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMST---R 67
L +C + + +Q+HA LL + + A L+ +YA + A +VF+ +S
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS 121
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
+ LWNS+++A ++NA+ L+R M + D Y ++RAC G+ R H
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF---------------NGIAE----- 167
+ GL + + L++ Y K G + +A +F G ++
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 168 ---------------PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
PD V W S++S + ++ ++ F MR+ G G LA
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 213 GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP--- 269
A+ L I + +HG K G + + L+ +Y + + A +F I N
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Query: 270 ------------------------------------DLVTWSALISGYSQCGEHEKVLLF 293
++VTW+++I G + G + L +
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 294 FRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSK 353
FR++ + +S+ + +L+ A+ + G EIHG+VIR + ++ V +AL++MY+K
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 354 CGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSAL 413
CG L G VF + ++++IS+NS+I G G+HG A +A MFDR++ G PD A+
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 414 LGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPV 473
L AC HAGLV +GREIF M F ++ + EHY +V LLG G L+EA + +++P
Sbjct: 542 LSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEP 601
Query: 474 DKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLR- 532
+LGALL+ C N ++AE +A +L P ++LSNIY+ GRW++ N+R
Sbjct: 602 KVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRA 661
Query: 533 DKMTGGLRKMPGLSWIE 549
L+K+ G SWIE
Sbjct: 662 LAKKKDLKKVSGSSWIE 678
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/508 (31%), Positives = 256/508 (50%), Gaps = 4/508 (0%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
L+ Y ++ A +F +M +V WN +I F + + A+ M + D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLD 237
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
+ C ++AC+ L M + +H V SGL SAL+ YS G + A VF+
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 164 G---IAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
+ +WNS++SG+ + + + + + D YTL+G L +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
L +G +H L SG + D VGS+LV +++ + A+++F + N D++ +S LI G
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
+ G + FR+LI D +V+ +L + A++ G +IHG I+ G ES+
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
++AL+DMY KCG + G+ +F M ER+++S+ +I G G +G EAFR F +++
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
G+ P+ TF LL AC H+GL+ E R + MK E+ ++ EHY +V LLG AG +
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 461 EAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYA 520
EA L +P DK I +LL+ C + N+ L +A+KL + P D + LSN YA
Sbjct: 598 EANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 521 GDGRWDDVKNLRDKMTGGLRKMPGLSWI 548
G WD + +R+ K G+SWI
Sbjct: 658 TLGMWDQLSKVREAAKKLGAKESGMSWI 685
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 207/448 (46%), Gaps = 36/448 (8%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
++ R + + A ++K +SQ+ F A ++ +Y ++ A+ VFD+MS R++ W +M+
Sbjct: 19 QAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMV 78
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDN-YTFACVIRACADNFDLGMLRLVHGGAVASGL 135
+ + + A+ L+R ML ++ + N + ++ V++AC D+ + LV+ L
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA----------- 184
D + +++V Y K G + EAN F I P WN+LISGY C A
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY-CKAGLMDEAVTLFH 197
Query: 185 --------AWDV------------GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
+W+ ++ M+ G DG+ L L + LL +G
Sbjct: 198 RMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS---NPDLVTWSALISGY 281
+ LH KSGL+S S L+ MYS C + A VF N + W++++SG+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
E+E L ++ DS ++ L N+R G ++H V+ G E D
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY 377
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEK 401
V S L+D+++ G + +F +P ++II+++ +I G G S AF +F +++
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREI 429
GL D S +L C + G++I
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQI 465
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 207/421 (49%), Gaps = 6/421 (1%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVF--DKMSTR-SVYLWNSM 75
L KQLH C++K+ L PF + L+ +Y+ + A VF +K++ SV +WNSM
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
+ F +++ + A+ L + +D+ D+YT + ++ C + +L + VH V SG
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
LD I S LV ++ +G + +A+++F+ + D++ ++ LI G S + +F
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
+ +G D + ++ +L + + L G+ +HGL K G +S+ + LV MY +C
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+D+ +F + D+V+W+ +I G+ Q G E+ +F K+I + + + +L++
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA 553
Query: 316 IAQTANVRPG-CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNII 373
+ + + +GLE ++ ++D+ + G + MP E +
Sbjct: 554 CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKT 613
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
+ S+++ G H A + +++L KG D + +++L A G+ ++ ++ +
Sbjct: 614 IWTSLLTACGTHKNAGLVTVIAEKLL-KGFPDDPSVYTSLSNAYATLGMWDQLSKVREAA 672
Query: 434 K 434
K
Sbjct: 673 K 673
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 6 QWLHSELSNVCKSLLR---AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFD 62
Q++ S + VC SL KQ+H +K +P AT LV +Y +I++ +FD
Sbjct: 443 QFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFD 502
Query: 63 KMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGM 122
M R V W +I F + R + A F M+ I+P+ TF ++ AC + G+
Sbjct: 503 GMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS---GL 559
Query: 123 LRLVHGG--AVASGLGLDAIC--CSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLI 177
L + S GL+ +V + GL EAN + N + EPD +W SL+
Sbjct: 560 LEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLL 619
Query: 178 SGYGCSAAWDVGMQMFSSMRLVGTRPD 204
+ C + G+ + +L+ PD
Sbjct: 620 T--ACGTHKNAGLVTVIAEKLLKGFPD 644
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 3/203 (1%)
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
+D L+A L + + G I +VI+ G+ +V +++ +I MY L V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 364 FRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE-KGLAPDAATFSALLGACCHAGL 422
F M ERNI+++ +++SG G ++A ++ R+L+ + A + +SA+L AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL 482
+ G +++R+ E N++ +V + G L EA + + + P + L+
Sbjct: 123 IQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS-WNTLI 180
Query: 483 SCCNSCGNSELAETVAQKLFQNN 505
S G + A T+ ++ Q N
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPN 203
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 274/528 (51%), Gaps = 49/528 (9%)
Query: 64 MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML 123
+ T S+ ++N M+++ A + F ++LF + G + PDN+T V+++ +G L
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKS------IGRL 59
Query: 124 R------LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLI 177
R VHG AV +GL D+ ++L+ Y+ LG + ++VF+ + + D+V WN LI
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI 119
Query: 178 SGYGCSAAWDVGMQMFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGL 236
S Y + ++ + +F M + + D T+ L + L IG+ ++ +
Sbjct: 120 SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEF 178
Query: 237 DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN---------------------------- 268
+ +G+ LV M+ +C C+D A VF S+ +
Sbjct: 179 EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 269 ---PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPG 325
D+V W+A+++GY Q ++ L FR + + D+ ++ ++L AQT + G
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLH 385
IHGY+ + + D V +AL+DMY+KCG + + VF + ER+ S+ S+I GL ++
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMN 358
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEH 445
G + A ++ + G+ DA TF A+L AC H G V EGR+IF M + N++ + EH
Sbjct: 359 GMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH 418
Query: 446 YVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILG---ALLSCCNSCGNSELAETVAQKLF 502
++ LL AG L+EA L + D+ ++ +LLS + GN ++AE VA+KL
Sbjct: 419 CSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLE 478
Query: 503 QNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ +D++ +L+++YA RW+DV N+R KM G+RK PG S IE
Sbjct: 479 KVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIE 526
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 213/463 (46%), Gaps = 38/463 (8%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+ ++ +++H +K L D + + L+ +YA+ I + VFD+M R V WN +I
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI 119
Query: 77 RAFALSQRFDNAVSLFRTM-LGADIKPDNYTFACVIRACA--DNFDLG--MLRLVH---- 127
++ + RF++A+ +F+ M +++K D T + AC+ N ++G + R V
Sbjct: 120 SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFE 179
Query: 128 -----GGAVA-----------------SGLGLDAICCSALVSAYSKLGLVHEANRVFNGI 165
G A+ S + C +++V Y G + EA +F
Sbjct: 180 MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
D+VLW ++++GY +D +++F M+ G RPD + L LL G A L G+
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
+HG +++ + D VG+ LV MY++C C+++A VF I D +W++LI G + G
Sbjct: 300 WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI-HGYVIRHGLESDVKVS 344
+ L + ++ +LD+I VL + V G +I H RH ++ +
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 345 SALIDMYSKCGFLHFGICVFRLM----PERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
S LID+ + G L + M E + Y S++S +G A R+ ++ LE
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEK-LE 478
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
K D++ + L A + + ++MKD I+ P
Sbjct: 479 KVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKD-LGIRKFP 520
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 254/508 (50%), Gaps = 2/508 (0%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
++ LY + + A +FD+M R + WN+MI +A + L M G ++PD
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
TF + DL M R++H V +G +D +AL++ Y K G + RV
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
I D+V W +ISG + + +FS M G+ +A ++ A +
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQ 283
G +HG + G D+ + L++MY++C +D + +F ++ DLV+W+A+ISGY+Q
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQ 424
Query: 284 CGEHEKVLLFFRKLIMER-KKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVK 342
+ K LL F ++ + +++DS V ++L + + + G IH VIR +
Sbjct: 425 NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL 484
Query: 343 VSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
V +AL+DMYSKCG+L F + ++++S+ +I+G G HG A ++ L G
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 403 LAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEA 462
+ P+ F A+L +C H G+V +G +IF M +F ++ EH +V LL A +E+A
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 463 YNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGD 522
+ + +LG +L C + G +E+ + + + + + P D V L + +A
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 523 GRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
RWDDV ++M GL+K+PG S IE
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 216/422 (51%), Gaps = 7/422 (1%)
Query: 12 LSNVCKSLLRAK---QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRS 68
L C SL R +H +L S D + ++ LV LYA + A VF++M R
Sbjct: 52 LLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERD 111
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHG 128
V W +MI ++ + A SL M IKP T ++ + ++ L+ +H
Sbjct: 112 VVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQCLHD 168
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDV 188
AV G D +++++ Y K V +A +F+ + + D+V WN++ISGY
Sbjct: 169 FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSE 228
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
+++ MR G RPD T L L +G+ LH K+G D D H+ + L++
Sbjct: 229 ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288
Query: 249 MYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
MY +C +++YRV +I N D+V W+ +ISG + G EK L+ F +++ L S
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
+A+V+AS AQ + G +HGYV+RHG D ++LI MY+KCG L + +F M
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP-DAATFSALLGACCHAGLVNEGR 427
ER+++S+N++ISG + +A +F+ + K + D+ T +LL AC AG + G+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 428 EI 429
I
Sbjct: 469 LI 470
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 173/362 (47%), Gaps = 3/362 (0%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S +NS I + +S F +ML + PD +TF +++ACA L +H
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWD 187
+ +G D S+LV+ Y+K GL+ A +VF + E D+V W ++I Y +
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
+ + MR G +P TL +L G+ + + L Q LH + G D D V + ++
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSML 186
Query: 248 SMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSI 307
++Y +C + A +F + D+V+W+ +ISGY+ G ++L ++ + + D
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
L+ ++ G +H +++ G + D+ + +ALI MY KCG V +
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 368 PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
P ++++ + +ISGL G A +A +F +L+ G + ++++ +C G + G
Sbjct: 307 PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 428 EI 429
+
Sbjct: 367 SV 368
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/578 (29%), Positives = 273/578 (47%), Gaps = 67/578 (11%)
Query: 39 FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
F ++ Y+ D++S FD++ R W +MI + ++ A+ + M+
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 99 DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEA 158
I+P +T V+ + A + + VH V GL + ++L++ Y+K G A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 159 NRVFN-------------------------------GIAEPDLVLWNSLISGYGCSAAWD 187
VF+ +AE D+V WNS+ISG+
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 188 VGMQMFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
+ +FS M R PD +TLA +L A+ LCIG+ +H +G D V + L
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 247 VSMYSRCKCMDSAYR---------------------------------VFCSISNPDLVT 273
+SMYSRC +++A R +F S+ + D+V
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
W+A+I GY Q G + + + FR ++ ++ +S +A +L+ + A++ G +IHG +
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEAF 392
+ G V VS+ALI MY+K G + F L+ ER+ +S+ S+I L HG A EA
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 393 RMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKL 452
+F+ +L +GL PD T+ + AC HAGLVN+GR+ F MKD I HY MV L
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 453 LGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFK 512
G AG L+EA + +P D G+LLS C N +L + A++L P ++
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 513 VMLSNIYAGDGRWDDVKNLRDKMTGG-LRKMPGLSWIE 549
L+N+Y+ G+W++ +R M G ++K G SWIE
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 155/358 (43%), Gaps = 69/358 (19%)
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
A + ++SAYSK G + F+ + + D V W ++I GY + +++ M
Sbjct: 80 AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK 139
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC----- 253
G P +TL +L +A + G+ +H K GL + V + L++MY++C
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 254 --------------------------KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEH 287
MD A F ++ D+VTW+++ISG++Q G
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 288 EKVLLFFRKLIMERKKL---DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVS 344
+ L F K++ R L D +A+VL++ A + G +IH +++ G + V
Sbjct: 260 LRALDIFSKML--RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 345 SALIDMYSKC----------------------------GFLHFGIC-----VFRLMPERN 371
+ALI MYS+C G++ G +F + +R+
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
++++ ++I G HG EA +F ++ G P++ T +A+L ++ G++I
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS-TRSVYLWNSMIRAFAL 81
KQ+H +K+ + L+ +YA +I SA FD + R W SMI A A
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL------ 135
+ A+ LF TML ++PD+ T+ V AC H G V G
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACT-----------HAGLVNQGRQYFDMM 541
Query: 136 -GLDAICCS-----ALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDV 188
+D I + +V + + GL+ EA + EPD+V W SL+S C ++
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS--ACRVHKNI 599
Query: 189 GMQMFSSMRLVGTRPD 204
+ ++ RL+ P+
Sbjct: 600 DLGKVAAERLLLLEPE 615
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 280/544 (51%), Gaps = 46/544 (8%)
Query: 12 LSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAA---TNDINSAYHVFDKMSTRS 68
L N CK+L Q+H +K + D ++ KL+ L+ A ++ + A +
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFPEPD 69
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVH 127
+++N+++R ++ S N+V++F M+ + PD+++FA VI+A + L +H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWD 187
A+ GL + L+ Y G V A +VF+ + +P+LV WN++I+ C D
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA--CFRGND 187
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
V G R I D L+ +H S ++++
Sbjct: 188 VA----------GARE-----------IFDKMLV--------RNHTSW--------NVML 210
Query: 248 SMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSI 307
+ Y + ++SA R+F + + D V+WS +I G + G + L+FR+L + +
Sbjct: 211 AGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEV 270
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
+ VL++ +Q+ + G +HG+V + G V V++ALIDMYS+CG + VF M
Sbjct: 271 SLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGM 330
Query: 368 PE-RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG 426
E R I+S+ S+I+GL +HG EA R+F+ + G+ PD +F +LL AC HAGL+ EG
Sbjct: 331 QEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG 390
Query: 427 REIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCN 486
+ F MK ++I+ EHY MV L G +G+L++AY+ +P P + LL C+
Sbjct: 391 EDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACS 450
Query: 487 SCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGL 545
S GN ELAE V Q+L + +P ++ V+LSN YA G+W DV ++R M ++K
Sbjct: 451 SHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAW 510
Query: 546 SWIE 549
S +E
Sbjct: 511 SLVE 514
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 256/511 (50%), Gaps = 8/511 (1%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
++++Y + A +FD+MS + +MI A+A D AV LF ML + KP
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
+ + ++++ + L R +H + +GL + + +V+ Y K G + A RVF+
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
+A V L+ GY + +++F + G D + + +L A L +
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQ 283
G+ +H K GL+S+ VG+ LV Y +C +SA R F I P+ V+WSA+ISGY Q
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 284 CGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYV----IRHGLES 339
+ E+ + F+ L R K SIL + SI Q +V C I G V I+ L
Sbjct: 364 MSQFEEAVKTFKSL---RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
SALI MYSKCG L VF M +I+++ + ISG +G ASEA R+F++++
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGEL 459
G+ P++ TF A+L AC HAGLV +G+ M ++N+ +HY M+ + +G L
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 460 EEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIY 519
+EA +++P D LS C + N EL E ++L Q +P D A V+ N+Y
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 520 AGDGRWDDVKNLRDKMTGG-LRKMPGLSWIE 549
G+W++ + M L+K SWI+
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQ 631
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 16/428 (3%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
++L +Q+HA +++ L + T +V +Y + A VFD+M+ + ++
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + R +A+ LF ++ ++ D++ F+ V++ACA +L + + +H GL
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ + LV Y K A R F I EP+ V W+++ISGY + ++ ++ F S+
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 197 RLVGTRP-DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
R + +T + + + IG +H + K L + S L++MYS+C C
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+D A VF S+ NPD+V W+A ISG++ G + L F K++ K +S+ VL +
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 316 IAQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNII 373
+ V G ++R + + + +ID+Y++ G L + + MP E + +
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAM 557
Query: 374 SYNSVISG------LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
S+ +SG L L A E R D D A + AG E
Sbjct: 558 SWKCFLSGCWTHKNLELGEIAGEELRQLD-------PEDTAGYVLPFNLYTWAGKWEEAA 610
Query: 428 EIFQRMKD 435
E+ + M +
Sbjct: 611 EMMKLMNE 618
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 171/356 (48%), Gaps = 1/356 (0%)
Query: 63 KMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGM 122
K+S + + N + + + ++ + A + M A + +Y++ C+ AC + L
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGC 182
RL+H + + ++ Y + + +A+++F+ ++E + V ++IS Y
Sbjct: 102 GRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAE 161
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
D + +FS M G +P LL + +P L G+ +H ++GL S++ +
Sbjct: 162 QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSI 221
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ +V+MY +C + A RVF ++ V + L+ GY+Q G L F L+ E
Sbjct: 222 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGV 281
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
+ DS + + VL + A + G +IH V + GLES+V V + L+D Y KC
Sbjct: 282 EWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR 341
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP-DAATFSALLGAC 417
F+ + E N +S++++ISG EA + F + K + ++ T++++ AC
Sbjct: 342 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQAC 397
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 255/531 (48%), Gaps = 42/531 (7%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
KQ+H L+ D L+ +YA D+N A +F +M +V WN MI F
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
R D +V M + +P+ T V+ AC
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF-------------------------- 361
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+ G V R+F+ I +P + WN+++SGY ++ + F M+
Sbjct: 362 ---------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
+PD TL+ +L A L G+ +HG+ ++ + +SH+ S L+++YS C+ M+ +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 262 VFCS-ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL---DSILVATVLASIA 317
+F I+ D+ W+++ISG+ K L+ FR+ M + + + ATVL+S +
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRR--MHQTAVLCPNETSFATVLSSCS 530
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
+ ++ G + HG V++ G SD V +AL DMY KCG + F + +N + +N
Sbjct: 531 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+I G G +G EA ++ +++ G PD TF ++L AC H+GLV G EI M+
Sbjct: 591 MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH 650
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
I+ +HY+ +V LG AG LE+A L ++ P + LLS C G+ LA V
Sbjct: 651 GIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRV 710
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGG-LRKMPGLSW 547
A+KL + +P +A V+LSN Y+ +WDD L+ M + K PG SW
Sbjct: 711 AEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 182/363 (50%), Gaps = 22/363 (6%)
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
D +A ++ K+G + EA VF+G+ E D+V WN++IS + + ++ M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK-CM 256
G P +TLA +L + G HG++ K+GLD + VG+ L+SMY++C +
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA-- 314
D RVF S+S P+ V+++A+I G ++ + + + FR + + ++DS+ ++ +L+
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 315 -------SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
S+++ G +IH +R G D+ ++++L+++Y+K ++ +F M
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 368 PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
PE N++S+N +I G G + ++ R+ + G P+ T ++LGAC +G V GR
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 428 EIFQRMKDEFNIKARPEHYVYMVKLLGSAG--ELEEA---YNLTQSLPEPVDKAILGALL 482
IF + +P + L G + EEA + Q DK L +L
Sbjct: 371 RIFSSI-------PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 423
Query: 483 SCC 485
S C
Sbjct: 424 SSC 426
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 192/456 (42%), Gaps = 80/456 (17%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL---- 71
CK L K +H +++ + D + +L+ LY D + A VFD+MS R VY
Sbjct: 21 CK--LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAF 78
Query: 72 ---------------------------WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDN 104
WN+MI + A+ +++ M+ P
Sbjct: 79 LTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSR 138
Query: 105 YTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLG-LVHEANRVFN 163
+T A V+ AC+ D HG AV +GL + +AL+S Y+K G +V RVF
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC- 222
+++P+ V + ++I G +QMF M G + D L+ +L I+ P C
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL-SISAPREGCD 257
Query: 223 ---------IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVT 273
+G+ +H L+ + G D H+ + L+ +Y++ K M+ A +F + ++V+
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
W+ +I G+ Q +K + F ++ + + + +VL + ++ +V G I
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI----- 372
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFR 393
F +P+ ++ ++N+++SG + EA
Sbjct: 373 ------------------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAIS 402
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
F ++ + L PD T S +L +C + G++I
Sbjct: 403 NFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 32/239 (13%)
Query: 208 LAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
LA LL D G+ +HG + G+ SD+++ + L+ +Y C D A +VF +S
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 268 NPDLVTWSALISGYSQCGE-------------------------------HEKVLLFFRK 296
D+ +W+A ++ + G+ EK L+ +++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 297 LIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGF 356
++ + +A+VL++ ++ + G HG ++ GL+ ++ V +AL+ MY+KCGF
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 357 L-HFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
+ +G+ VF + + N +SY +VI GL EA +MF + EKG+ D+ S +L
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 10 SELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV 69
S S +C SLL +Q H ++K+ D F T L +Y +I+SA FD + ++
Sbjct: 527 SSCSRLC-SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNT 585
Query: 70 YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
+WN MI + + R D AV L+R M+ + KPD TF V+ AC+ H G
Sbjct: 586 VIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS-----------HSG 634
Query: 130 AVASGL--------------GLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWN 174
V +GL LD C +V + G + +A ++ + VLW
Sbjct: 635 LVETGLEILSSMQRIHGIEPELDHYIC--IVDCLGRAGRLEDAEKLAEATPYKSSSVLWE 692
Query: 175 SLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
L+S C DV + + +L+ P
Sbjct: 693 ILLS--SCRVHGDVSLARRVAEKLMRLDP 719
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 280/587 (47%), Gaps = 78/587 (13%)
Query: 37 DPFYATKLVRLYAATNDINSAYHVFDKMST--RSVYLWNSMIRAFALSQRFDNAVSLFRT 94
D T +V Y A+ DI A VF+K R ++N+MI F+ + +A++LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 95 MLGADIKPDNYTFACVIRA---CADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSK 151
M KPDN+TFA V+ AD D H A+ SG G +ALVS YSK
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 152 LG----LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM----------- 196
L+H A +VF+ I E D W ++++GY + +D+G ++ M
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 197 -------------------RLV--GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
R+V G D +T ++ A LL +G+ +H +
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFR 295
D H + LVS+Y +C D A +F + DLV+W+AL+SGY G + L F+
Sbjct: 317 -DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 296 KLIMERKKLDSILVATVLA------------SIAQTANVRP------------------- 324
++ E+ L +++ + LA S + P
Sbjct: 376 EM-KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 325 -GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
G + H +++ G +S + +ALI MY+KCG + VFR MP + +S+N++I+ LG
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
HG +EA +++ +L+KG+ PD T +L AC HAGLV++GR+ F M+ + I
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 444 EHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQ 503
+HY ++ LL +G+ +A ++ +SLP I ALLS C GN EL A KLF
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 504 NNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
P + ++LSN++A G+W++V +R M G++K SWIE
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 22/193 (11%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q HA LLK L+ +YA + A VF M WN++I A
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACA---------DNFD-LGMLRLVHGGAVA 132
AV ++ ML I+PD T V+ AC+ FD + + + GA
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQ 191
+D +C S G +A V + +P +W +L+S GC ++ +
Sbjct: 557 YARLIDLLCRS---------GKFSDAESVIESLPFKPTAEIWEALLS--GCRVHGNMELG 605
Query: 192 MFSSMRLVGTRPD 204
+ ++ +L G P+
Sbjct: 606 IIAADKLFGLIPE 618
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/611 (28%), Positives = 281/611 (45%), Gaps = 104/611 (17%)
Query: 41 ATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRT------ 94
+ +LV LY+ + + A +VFD+M R+VY WN++I A+ A LF +
Sbjct: 26 SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERD 85
Query: 95 -----------------------MLGA-------DIKPDNYTFACVIRACADNFDLGMLR 124
M G DI D++T +++ A ++
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGE 145
Query: 125 LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNG--------------IA---- 166
+HG V +G S+L+ YSK G E +FNG IA
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 167 -------------EPDL---VLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAG 210
P+L + WN+LI+GY + + ++M SM G + D ++
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 211 LLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD------------- 257
+L ++ L IG+ +H K+G S+ V S +V +Y +C M
Sbjct: 266 VLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 258 ------------------SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
A R+F S+S +LV W+A+ GY + + VL R I
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA 385
Query: 300 -ERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
E DS+++ +VL + + A + PG EIHG+ +R G+ D K+ +A +DMYSKCG +
Sbjct: 386 NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVE 445
Query: 359 FGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
+ +F ER+ + YN++I+G HG +++F+ F+ + E G PD TF ALL AC
Sbjct: 446 YAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACR 505
Query: 419 HAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE-PVDKAI 477
H GLV EG + F+ M + +NI HY M+ L G A L++A L + + + D I
Sbjct: 506 HRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVI 565
Query: 478 LGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG 537
LGA L+ C+ N+EL + V +KL ++ + + ++N YA GRWD+++ +R +M G
Sbjct: 566 LGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRG 625
Query: 538 G-LRKMPGLSW 547
L G SW
Sbjct: 626 KELEIFSGCSW 636
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 5/244 (2%)
Query: 39 FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
+ A+ ++ Y++ + A +FD +S +++ +W +M + ++ D+ + L R +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 99 DIK-PDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE 157
+ PD+ V+ AC+ + + +HG ++ +G+ +D +A V YSK G V
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEY 446
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD 217
A R+F+ E D V++N++I+G Q F M G +PD T LL
Sbjct: 447 AERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRH 506
Query: 218 PSLLCIGQG-LHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSA 276
L+ G+ + + ++ + ++ +Y + +D A + I D V A
Sbjct: 507 RGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI---DQVEKDA 563
Query: 277 LISG 280
+I G
Sbjct: 564 VILG 567
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 280/533 (52%), Gaps = 11/533 (2%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
A+ +H + + D L+ +Y+ D+ S+ +F+K++ ++ W +MI ++
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRL---VHGGAVASGLGLD 138
+ + A+ F M+ + I+P+ T V+ +C +G++R VHG AV L +
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL---IGLIREGKSVHGFAVRRELDPN 337
Query: 139 AICCS-ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
S ALV Y++ G + + V +++ ++V WNSLIS Y + +F M
Sbjct: 338 YESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV 397
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
+PD +TLA + + L+ +G+ +HG ++ + SD V + L+ MYS+ +D
Sbjct: 398 TQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVD 456
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
SA VF I + +VTW++++ G+SQ G + + F + +++ + V+ + +
Sbjct: 457 SASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACS 516
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
++ G +H +I GL+ D+ +ALIDMY+KCG L+ VFR M R+I+S++S
Sbjct: 517 SIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSS 575
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+I+ G+HG A F++++E G P+ F +L AC H+G V EG+ F MK F
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SF 634
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
+ EH+ + LL +G+L+EAY + +P D ++ G+L++ C ++ + +
Sbjct: 635 GVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAI 694
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
L D + +LSNIYA +G W++ + LR M + L+K+PG S IE
Sbjct: 695 KNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 227/417 (54%), Gaps = 3/417 (0%)
Query: 16 CKSLLRAKQLHACLLKT-HLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
C SL QLHA LL T L +DP TKL+ YA +S+ VF+ +++
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGV 70
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFD-LGMLRLVHGGAVAS 133
+I+ D A+ L+ ++ + + F V+RACA + + L + VHG +
Sbjct: 71 LIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKG 130
Query: 134 GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
G+ DA+ ++L+ Y + G + +A +VF+G+ DLV W++L+S + ++MF
Sbjct: 131 GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMF 190
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
M G PD T+ ++ G A+ L I + +HG + D D + + L++MYS+C
Sbjct: 191 KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC 250
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
+ S+ R+F I+ + V+W+A+IS Y++ EK L F ++I + + + + +VL
Sbjct: 251 GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVL 310
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVK-VSSALIDMYSKCGFLHFGICVFRLMPERNI 372
+S +R G +HG+ +R L+ + + +S AL+++Y++CG L V R++ +RNI
Sbjct: 311 SSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Query: 373 ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+++NS+IS G +A +F +++ + + PDA T ++ + AC +AGLV G++I
Sbjct: 371 VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 221/429 (51%), Gaps = 7/429 (1%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
++H ++K + D T L+ +Y T +++ A VFD M R + W++++ + +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
A+ +F+ M+ ++PD T V+ CA+ L + R VHG LD C+
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
+L++ YSK G + + R+F IA+ + V W ++IS Y + ++ FS M G P
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSL-LVSMYSRCKCMDSAYRV 262
+ TL +L L+ G+ +HG + + LD + SL LV +Y+ C + V
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
+S+ ++V W++LIS Y+ G + L FR+++ +R K D+ +A+ +++ V
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G +IHG+VIR + SD V ++LIDMYSK G + VF + R+++++NS++ G
Sbjct: 422 PLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQR-----MKDEF 437
+G + EA +FD + L + TF A++ AC G + +G+ + + +KD F
Sbjct: 481 SQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLF 540
Query: 438 NIKARPEHY 446
A + Y
Sbjct: 541 TDTALIDMY 549
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 156/322 (48%), Gaps = 5/322 (1%)
Query: 110 VIRACADNFDLGMLRLVHGGAVASG-LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP 168
+ R+C+ L ++ +H + +G L D + + L+ +Y+ +G + VF P
Sbjct: 7 LFRSCSS---LRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 169 DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA-DPSLLCIGQGL 227
D ++ LI D + ++ + T+ + +L A L +G +
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEH 287
HG K G+D D+ + + L+ MY + + A +VF + DLV WS L+S + GE
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 288 EKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSAL 347
K L F+ ++ + + D++ + +V+ A+ +R +HG + R + D + ++L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 348 IDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDA 407
+ MYSKCG L +F + ++N +S+ ++IS + +A R F +++ G+ P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 408 ATFSALLGACCHAGLVNEGREI 429
T ++L +C GL+ EG+ +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSV 325
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 259/512 (50%), Gaps = 5/512 (0%)
Query: 41 ATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADI 100
AT L+ Y + A +FD+M R V W +MI +A S A F M+
Sbjct: 48 ATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGT 107
Query: 101 KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN- 159
P+ +T + V+++C + L LVHG V G+ +A+++ Y+ + EA
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 160 RVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPS 219
+F I + V W +LI+G+ G++M+ M L Y + + A
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 220 LLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALIS 279
+ G+ +H K G S+ V + ++ +Y RC + A F + + DL+TW+ LIS
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
+ E LL F++ + + +++A+ A A + G ++HG + R G
Sbjct: 288 ELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 340 DVKVSSALIDMYSKCGFLHFGICVF-RLMPERNIISYNSVISGLGLHGCASEAFRMFDRI 398
+V++++ALIDMY+KCG + VF ++ RN++S+ S++ G G HG +EA +FD++
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 399 LEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGE 458
+ G+ PD F A+L AC HAGLV +G + F M+ E+ I + Y +V LLG AG+
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 459 LEEAYNLTQSLPEPVDKAILGALLSCCNSCG-NSELAETVAQKLFQNNPADNAFKVMLSN 517
+ EAY L + +P D++ GA+L C + N ++ A+K+ + P VMLS
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSY 526
Query: 518 IYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWI 548
IYA +G+W D +R M G +K G+SWI
Sbjct: 527 IYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 167/295 (56%), Gaps = 2/295 (0%)
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
I + L+ +Y + GLV EA +F+ + + D+V W ++I+GY S + F M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK-CMDS 258
GT P+ +TL+ +L + +L G +HG+ K G++ +V + +++MY+ C M++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A +F I + VTW+ LI+G++ G+ L ++++++E ++ + + + A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
+V G +IH VI+ G +S++ V ++++D+Y +CG+L F M ++++I++N++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
IS L +SEA MF R +G P+ TF++L+ AC + +N G+++ R+
Sbjct: 286 ISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 10/291 (3%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
S+ KQ+HA ++K + ++ LY ++ A H F +M + + WN++I
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
S A+ +F+ P+ YTF ++ ACA+ L + +HG G
Sbjct: 288 ELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAE-PDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ +AL+ Y+K G + ++ RVF I + +LV W S++ GYG +++F M
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
G RPD +L L+ G + + + + G++ D + + +V + R
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 256 MDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFR---KLIMERK 302
+ AY + + PD TW A++ C H+ L R + +ME K
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGA---CKAHKHNGLISRLAARKVMELK 514
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 273/533 (51%), Gaps = 15/533 (2%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L++ +H ++ L D AT L+ +Y+ ++ A +F + R V W++MI +
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
+ + + D A+SLFR M+ IKP+ T V++ CA + + +H A+ + + +
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+A++S Y+K G A + F + D V +N+L GY + ++ +M+L
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
G PD T+ G+L A S G ++G K G DS+ HV L++M+++C + +
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555
Query: 259 AYRVF--CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
A +F C V+W+ +++GY G+ E+ + FR++ +E+ + +++ ++ +
Sbjct: 556 AIVLFDKCGFEKST-VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
A+ + +R G +H +I+ G S V ++L+DMY+KCG + F + + I+S+N
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWN 674
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+++S HG AS A +F + E L PD+ +F ++L AC HAGLV EG+ IF+ M +
Sbjct: 675 TMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGER 734
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
I+A EHY MV LLG AG EA + + + + GALL+ N L+
Sbjct: 735 HKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNA 794
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGLRKMPGLSWIE 549
+L + P + + Y+ D R +V N+ ++K+P SWIE
Sbjct: 795 ALCQLVKLEPLNPSH-------YSQDRRLGEVNNV-----SRIKKVPACSWIE 835
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 200/378 (52%), Gaps = 1/378 (0%)
Query: 40 YATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
+++ L+ +Y D+ +A VF+++ + W +M+ A+A + F+ + LF M D
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD 295
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
++ + A ++A A DL +H AV GL D ++L+S YSK G + A
Sbjct: 296 VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAE 355
Query: 160 RVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPS 219
++F I + D+V W+++I+ Y + D + +F M + +P+ TL +L G A +
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 220 LLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALIS 279
+G+ +H + K+ ++S+ + ++SMY++C A + F + D V ++AL
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
GY+Q G+ K ++ + + DS + +L + A ++ G ++G +I+HG +S
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 340 DVKVSSALIDMYSKCGFLHFGICVF-RLMPERNIISYNSVISGLGLHGCASEAFRMFDRI 398
+ V+ ALI+M++KC L I +F + E++ +S+N +++G LHG A EA F ++
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 399 LEKGLAPDAATFSALLGA 416
+ P+A TF ++ A
Sbjct: 596 KVEKFQPNAVTFVNIVRA 613
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 14/459 (3%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
CK+ Q+H L+ + L +L+ Y+ + + +FD + V LWNSM
Sbjct: 15 CKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSM 70
Query: 76 IRAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
IR + + A+ F M I PD Y+F ++ACA + D +H G
Sbjct: 71 IRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMG 130
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY---GCSAAWDVGMQ 191
L D +ALV Y K + A +VF+ + D+V WN+++SG GCS+A +
Sbjct: 131 LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA---ALL 187
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
+F MR D +L L+ ++ + + LHGL K G G L+ MY
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYC 245
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
C + +A VF + D +W +++ Y+ G E+VL F + +++ + A+
Sbjct: 246 NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAAS 305
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERN 371
L + A ++ G IH Y ++ GL DV V+++L+ MYSKCG L +F + +R+
Sbjct: 306 ALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRD 365
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
++S++++I+ G EA +F ++ + P+A T +++L C G+ I
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI-H 424
Query: 432 RMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLP 470
+ +I++ E ++ + G A + LP
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 275/537 (51%), Gaps = 9/537 (1%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL K++HA ++K D + L+ LY A VF++M R + WNSMI
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 78 AF-ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ AL F +++ LF+ ML KPD ++ + AC+ + M + +H AV S +
Sbjct: 205 GYLALGDGF-SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263
Query: 137 L-DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
D + ++++ YSK G V A R+FNG+ + ++V WN +I Y + F
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 196 M-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M G +PD T LL S + G+ +HG + + G + + L+ MY C
Sbjct: 324 MSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
+ SA +F ++ ++++W+++I+ Y Q G++ L F++L DS +A++L
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+ A++ ++ G EIH Y+++ S+ + ++L+ MY+ CG L F + ++++S
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+NS+I +HG + +F ++ + P+ +TF++LL AC +G+V+EG E F+ MK
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
E+ I EHY M+ L+G G A + +P I G+LL+ + + +A
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIA 619
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIEG 550
E A+++F+ + V+L N+YA GRW+DV ++ M + G+ + S +E
Sbjct: 620 EFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEA 676
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 206/399 (51%), Gaps = 5/399 (1%)
Query: 32 THLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSL 91
T DP T+ +R +A + + A +FD+M+ +LWN MI+ F + AV
Sbjct: 59 TKQVNDP-ALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQF 117
Query: 92 FRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSK 151
+ M+ A +K D +T+ VI++ A L + +H + G D C++L+S Y K
Sbjct: 118 YSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK 177
Query: 152 LGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
LG +A +VF + E D+V WNS+ISGY + +F M G +PD ++
Sbjct: 178 LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSA 237
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLDS-DSHVGSLLVSMYSRCKCMDSAYRVFCSISNPD 270
LG + +G+ +H + +S +++ D V + ++ MYS+ + A R+F + +
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 271 LVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHG 330
+V W+ +I Y++ G L F+K+ E+ L ++ ++ ++ + + G IHG
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKM-SEQNGLQPDVITSI--NLLPASAILEGRTIHG 354
Query: 331 YVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASE 390
Y +R G + + +ALIDMY +CG L +F M E+N+IS+NS+I+ +G
Sbjct: 355 YAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 391 AFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
A +F + + L PD+ T +++L A + ++EGREI
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 257/532 (48%), Gaps = 1/532 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+ LHA +KT L + + L+ +Y I+ + VF +M R+ W ++I +
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
R+ ++ F M ++ D YTFA ++ACA + + +H + G
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
++L + Y++ G + + +F ++E D+V W SLI Y ++ F MR
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
P+ T A + A S L G+ LH GL+ V + ++ MYS C + SA +
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F + D+++WS +I GY Q G E+ +F + K +A++L+ A +
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G ++H + GLE + V S+LI+MYSKCG + +F +I+S ++I+G
Sbjct: 428 EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGY 487
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR 442
HG + EA +F++ L+ G PD+ TF ++L AC H+G ++ G F M++ +N++
Sbjct: 488 AEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPA 547
Query: 443 PEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLF 502
EHY MV LL AG L +A + + D + LL C + G+ E A+++
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 607
Query: 503 QNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIEGSYC 553
+ +P V L+NIY+ G ++ N+R M G+ K PG S I+ C
Sbjct: 608 ELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDC 659
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 184/379 (48%), Gaps = 2/379 (0%)
Query: 53 DINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD--IKPDNYTFACV 110
++ +A VFDKM + W S+I+ + + D A+ LF M D + PD + V
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 111 IRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDL 170
++AC + ++ +H AV + L S+L+ Y ++G + ++ RVF+ + +
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 171 VLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL 230
V W ++I+G + + G+ FS M D YT A L A + G+ +H
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 231 SHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKV 290
G + V + L +MY+ C M +F ++S D+V+W++LI Y + G+ K
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 291 LLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDM 350
+ F K+ + + A++ ++ A + + G ++H V+ GL + VS++++ M
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 351 YSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATF 410
YS CG L +F+ M R+IIS++++I G G E F+ F + + G P
Sbjct: 355 YSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL 414
Query: 411 SALLGACCHAGLVNEGREI 429
++LL + ++ GR++
Sbjct: 415 ASLLSVSGNMAVIEGGRQV 433
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 141/267 (52%), Gaps = 2/267 (0%)
Query: 153 GLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV--GTRPDGYTLAG 210
G + A +VF+ + D+V W S+I Y + D + +FS+MR+V PD L+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 211 LLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPD 270
+L S + G+ LH + K+ L S +VGS L+ MY R +D + RVF + +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 271 LVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHG 330
VTW+A+I+G G +++ L +F ++ + D+ A L + A V+ G IH
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 331 YVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASE 390
+VI G + + V+++L MY++CG + G+C+F M ER+++S+ S+I G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 391 AFRMFDRILEKGLAPDAATFSALLGAC 417
A F ++ + P+ TF+++ AC
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSAC 320
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 22/342 (6%)
Query: 14 NVCKSLLR---AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVY 70
+ C SL R +QLH +L L+ + ++++Y+ ++ SA +F M R +
Sbjct: 318 SACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
W+++I + + + F M + KP ++ A ++ + + R VH A
Sbjct: 378 SWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA 437
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
+ GL ++ S+L++ YSK G + EA+ +F D+V ++I+GY +
Sbjct: 438 LCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAI 497
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS--GLDSDSHVGSLLVS 248
+F VG RPD T +L L +G + ++ + H G +V
Sbjct: 498 DLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYG-CMVD 556
Query: 249 MYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSI 307
+ R + A ++ +S D V W+ L+ G+ E+ R+ +LD
Sbjct: 557 LLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIER----GRRAAERILELDPT 612
Query: 308 LVATVLASIA----------QTANVRPGCEIHGYVIRHGLES 339
AT L ++A + ANVR + G + G S
Sbjct: 613 -CATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 261/546 (47%), Gaps = 38/546 (6%)
Query: 39 FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
F L+ Y+ I+ F+K+ R WN +I ++LS AV + TM+
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM-R 131
Query: 99 DIKPD--NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVH 156
D + T +++ + N + + + +HG + G + S L+ Y+ +G +
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 157 EANRVFNGIAEPDLVLWNSLISGY-GC----------------SAAWDV----------- 188
+A +VF G+ + + V++NSL+ G C S +W
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLA 251
Query: 189 --GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
++ F M++ G + D Y +L + G+ +H ++ +VGS L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 247 VSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDS 306
+ MY +CKC+ A VF + ++V+W+A++ GY Q G E+ + F L M+R +D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF--LDMQRSGIDP 369
Query: 307 --ILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
+ +++ A +++ G + HG I GL V VS++L+ +Y KCG + +F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
M R+ +S+ +++S G A E ++FD++++ GL PD T + ++ AC AGLV
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSC 484
+G+ F+ M E+ I HY M+ L +G LEEA +P P D LLS
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 485 CNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMP 543
C + GN E+ + A+ L + +P A +LS+IYA G+WD V LR M ++K P
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 544 GLSWIE 549
G SWI+
Sbjct: 610 GQSWIK 615
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 197/484 (40%), Gaps = 73/484 (15%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
KQ+H ++K + L+ +YA I+ A VF + R+ ++NS++
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 82 SQRFDNAVSLFRTMLGADI------------------------------KPDNYTFACVI 111
++A+ LFR M + K D Y F V+
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 112 RACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLV 171
AC + + +H + + SAL+ Y K +H A VF+ + + ++V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 172 LWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS 231
W +++ GYG + + +++F M+ G PD YTL + A+ S L G HG +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 232 HKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVL 291
SGL V + LV++Y +C +D + R+F ++ D V+W+A++S Y+Q G + +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 292 LFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI-RHGLESDVKVSSALIDM 350
F K++ K D + + V+++ ++ V G + +G+ + S +ID+
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 351 YSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATF 410
+S+ G L + MP PDA +
Sbjct: 518 FSRSGRLEEAMRFINGMP----------------------------------FPPDAIGW 543
Query: 411 SALLGACCHAGLVNEGREIFQRMKDEFNIKARPEH---YVYMVKLLGSAGELEEAYNLTQ 467
+ LL AC + G + G+ + + I+ P H Y + + S G+ + L +
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESL-----IELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598
Query: 468 SLPE 471
+ E
Sbjct: 599 GMRE 602
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
KQ+HAC+++T+ + + L+ +Y ++ A VFD+M ++V W +M+ +
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
+ R + AV +F M + I PD+YT I ACA+ L HG A+ SGL
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
++LV+ Y K G + ++ R+FN + D V W +++S Y +Q+F M G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGL-SHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
+PDG TL G++ + L+ GQ L + + G+ S ++ ++SR ++ A
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 260 YRVFCSIS-NPDLVTWSALISGYSQCGEHE 288
R + PD + W+ L+S G E
Sbjct: 528 MRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 5/195 (2%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL Q H + + L + LV LY DI+ + +F++M+ R W +M+
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC--ADNFDLGMLRLVHGGAVASGL 135
A+A R + LF M+ +KPD T VI AC A + G R G+
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ-RYFKLMTSEYGI 504
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQMFS 194
S ++ +S+ G + EA R NG+ PD + W +L+S ++G
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 195 SM-RLVGTRPDGYTL 208
S+ L P GYTL
Sbjct: 565 SLIELDPHHPAGYTL 579
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 284/567 (50%), Gaps = 33/567 (5%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM-STRSVYLWNS 74
CKSL KQLHA +L+T ++ + + +++ +++ A +VF + S ++N
Sbjct: 22 CKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNP 81
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
+R + S + ++ + + D ++F +++A + L +HG A
Sbjct: 82 FLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIA 141
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
D + + Y+ G ++ A VF+ ++ D+V WN++I Y D ++F
Sbjct: 142 TLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFE 201
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M+ PD L ++ + + ++ ++ + D+H+ + LV+MY+
Sbjct: 202 EMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGE---------------------------- 286
CMD A F +S +L +A++SGYS+CG
Sbjct: 262 CMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 287 ---HEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKV 343
++ L F ++ K D + + +V+++ A + +H + +GLES++ +
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 344 SSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGL 403
++ALI+MY+KCG L VF MP RN++S++S+I+ L +HG AS+A +F R+ ++ +
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 404 APDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAY 463
P+ TF +L C H+GLV EG++IF M DE+NI + EHY MV L G A L EA
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 464 NLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDG 523
+ +S+P + I G+L+S C G EL + A+++ + P + V++SNIYA +
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQ 561
Query: 524 RWDDVKNLRDKM-TGGLRKMPGLSWIE 549
RW+DV+N+R M + K GLS I+
Sbjct: 562 RWEDVRNIRRVMEEKNVFKEKGLSRID 588
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 280/568 (49%), Gaps = 44/568 (7%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
+++ + LHA ++KT D F AT LV +Y + A V D+M R + N+ +
Sbjct: 47 VVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSG 106
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
+ +A +F + ++ T A V+ C D + GM +H A+ SG ++
Sbjct: 107 LLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD-IEGGMQ--LHCLAMKSGFEME 163
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
++LVS YS+ G A R+F + +V +N+ ISG + ++ +F+ MR
Sbjct: 164 VYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRK 223
Query: 199 VGTR-PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
+ P+ T + A L G+ LHGL K ++ VG+ L+ MYS+C+C
Sbjct: 224 FSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 258 SAYRVFCSISNP-DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
SAY VF + + +L++W+++ISG G+HE + F KL E K DS ++++
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 317 AQTANV-----------------------------------RPGCEIHGYVIRHGLESDV 341
+Q V + G EIHG+VI+ E D+
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDI 403
Query: 342 KVSSALIDMYSKCGFLHFGICVF-RLMPE-RNIISYNSVISGLGLHGCASEAFRMFDRIL 399
V ++LIDMY KCG + +F R P+ ++ + +N +ISG G HG A +F+ +
Sbjct: 404 FVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLR 463
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGEL 459
E+ + P ATF+A+L AC H G V +G +IF+ M++E+ K EH M+ LLG +G L
Sbjct: 464 EEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRL 523
Query: 460 EEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIY 519
EA + + ++ +LL C + L E A KL + P + A V+LS+IY
Sbjct: 524 REAKEVIDQM-SEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIY 582
Query: 520 AGDGRWDDVKNLRDKM-TGGLRKMPGLS 546
A RW+DV+++R + L K+PGLS
Sbjct: 583 AALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 214/426 (50%), Gaps = 21/426 (4%)
Query: 102 PDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRV 161
P+ +TF ++++CA D+ R++H V +G +D +ALVS Y K+ V +A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 162 FNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLL 221
+ + E + N+ +SG + +MF R+ G+ + T+A +LGG D +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY 281
G LH L+ KSG + + +VG+ LVSMYSRC A R+F + + +VT++A ISG
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 282 SQCGEHEKVLLFF---RKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
+ G V F RK E + + + + A N++ G ++HG V++ +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEP--NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVF-RLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
+ V +ALIDMYSKC VF L RN+IS+NSVISG+ ++G A +F++
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAG 457
+ +GL PD+AT+++L+ G V E + F+RM ++ P + LL +
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM---LSVVMVPSLKC-LTSLLSACS 379
Query: 458 EL------EEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAF 511
++ +E + D +L +L+ CG S A + + F+ P D F
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR-FEPKPKDPVF 438
Query: 512 -KVMLS 516
VM+S
Sbjct: 439 WNVMIS 444
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 161/383 (42%), Gaps = 40/383 (10%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C + QLH +K+ + + T LV +Y+ + A +F+K+ +SV +N+
Sbjct: 142 CGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 76 IRAFALSQRFDNAVSLFRTMLG-ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
I + + S+F M + +P++ TF I ACA +L R +HG +
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP-DLVLWNSLISGYGCSAAWDVGMQMF 193
+ + +AL+ YSK A VF + + +L+ WNS+ISG + + +++F
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 194 SSMRLVGTRPDGYTLAGLLGGIAD--------------------PSLLCI---------- 223
+ G +PD T L+ G + PSL C+
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDI 381
Query: 224 -----GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS--NPDLVTWSA 276
G+ +HG K+ + D V + L+ MY +C A R+F D V W+
Sbjct: 382 WTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNV 441
Query: 277 LISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI-RH 335
+ISGY + GE E + F L E+ + VL++ + NV G +I + +
Sbjct: 442 MISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEY 501
Query: 336 GLESDVKVSSALIDMYSKCGFLH 358
G + + +ID+ + G L
Sbjct: 502 GYKPSTEHIGCMIDLLGRSGRLR 524
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 237/472 (50%), Gaps = 31/472 (6%)
Query: 106 TFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI 165
T V+R+C + + + +H + + DA L+ S L V A VF+ +
Sbjct: 31 TLISVLRSCKN---IAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG----------- 214
+ P++ L+ ++I G+ S G+ ++ M PD Y + +L
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 215 ----IADPSLLCIGQGLHGLSHKSGL------------DSDSHVGSLLVSMYSRCKCMDS 258
+ S +G + + KSG D D +++++ YS C +
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A +F + D V W+A+I G + E K L FR++ ME + VL++ +
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
+ G +H +V +E V +ALI+MYS+CG ++ VFR+M ++++ISYN++
Sbjct: 268 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 327
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFN 438
ISGL +HG + EA F ++ +G P+ T ALL AC H GL++ G E+F MK FN
Sbjct: 328 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFN 387
Query: 439 IKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVA 498
++ + EHY +V LLG G LEEAY +++P D +LG LLS C GN EL E +A
Sbjct: 388 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 447
Query: 499 QKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
++LF++ D+ V+LSN+YA G+W + +R+ M G+ K PG S IE
Sbjct: 448 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 212/490 (43%), Gaps = 80/490 (16%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
CK++ +HA +++T QD F +L+R+ + + ++ AY VF +S +VYL+ +M
Sbjct: 39 CKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAM 98
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
I F S R + VSL+ M+ + PDNY V++AC DL + R +H + G
Sbjct: 99 IDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGF 154
Query: 136 G-------------------------------LDAICCSALVSAYSKLGLVHEANRVFNG 164
G D + + +++ YS+ G + EA +F
Sbjct: 155 GSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQD 214
Query: 165 IAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
+ D V W ++I G + + +++F M++ + +T +L +D L +G
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG 274
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQC 284
+ +H ++ + VG+ L++MYSRC ++ A RVF + + D+++++ +ISG +
Sbjct: 275 RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMH 334
Query: 285 GEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVS 344
G + + FR + + G +
Sbjct: 335 GASVEAINEFRDM-----------------------------------VNRGFRPNQVTL 359
Query: 345 SALIDMYSKCGFLHFGICVFRLMP-----ERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
AL++ S G L G+ VF M E I Y ++ LG G EA+R + I
Sbjct: 360 VALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI- 418
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGEL 459
+ PD LL AC G + G +I +R+ + N + YV + L S+G+
Sbjct: 419 --PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT--YVLLSNLYASSGKW 474
Query: 460 EEAYNLTQSL 469
+E+ + +S+
Sbjct: 475 KESTEIRESM 484
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 13/321 (4%)
Query: 36 QDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTM 95
+D AT ++ Y+ I A +F + + W +MI ++ + A+ LFR M
Sbjct: 187 RDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLV 155
++ + +T CV+ AC+D L + R VH + L +AL++ YS+ G +
Sbjct: 247 QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
Query: 156 HEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
+EA RVF + + D++ +N++ISG A + F M G RP+ TL LL
Sbjct: 307 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 216 ADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVT 273
+ LL IG + + + ++ +V + R ++ AYR +I PD +
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 274 WSALISGYSQCGEHEKVLLFFR--KLIMERKKLDS---ILVATVLASIAQTANVRPGCEI 328
L+S C H + L + K + E + DS +L++ + AS + + EI
Sbjct: 427 LGTLLSA---CKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYAS---SGKWKESTEI 480
Query: 329 HGYVIRHGLESDVKVSSALID 349
+ G+E + S+ +D
Sbjct: 481 RESMRDSGIEKEPGCSTIEVD 501
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 275/567 (48%), Gaps = 40/567 (7%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+QLHA + + L D KLV Y+A N ++ A + + WN +I ++ +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+RF +VS+++ M+ I+ D +T+ VI+ACA D R+VHG S + C
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+AL+S Y + G V A R+F+ ++E D V WN++I+ Y ++ M L G
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 203 PDGYTLAGLLGGIADP-----SLLCI------GQGLHGLSHKSGLDSDSHVGSL------ 245
T + GG + +L C+ + ++ +GL + SH+G+L
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 246 --------------------LVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
L++MYSRC + A+ VF + L TW+++ISG++
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD-VKVS 344
E+ +++++ + I +A++L A+ N++ G E H Y++R D + +
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 345 SALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLA 404
++L+DMY+K G + VF M +R+ ++Y S+I G G G A F + G+
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 405 PDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYN 464
PD T A+L AC H+ LV EG +F +M+ F I+ R EHY MV L AG L++A +
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 465 LTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQK-LFQNNPADNAFKVMLSNIYAGDG 523
+ ++P A+ LL C GN+ + E A K L + P ++L+++YA G
Sbjct: 583 IFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTG 642
Query: 524 RWDDVKNLRDKMTG-GLRKMPGLSWIE 549
W + ++ ++ G++K + +E
Sbjct: 643 SWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%)
Query: 206 YTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCS 265
Y+ A LL + GQ LH SGL+ DS + LV+ YS +D A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 266 ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPG 325
+ W+ LI Y + ++ + +++++ + + D +V+ + A + G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLH 385
+HG + ++ V +ALI MY + G + +F M ER+ +S+N++I+
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG 421
EAF++ DR+ G+ T++ + G C AG
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 275/567 (48%), Gaps = 40/567 (7%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+QLHA + + L D KLV Y+A N ++ A + + WN +I ++ +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+RF +VS+++ M+ I+ D +T+ VI+ACA D R+VHG S + C
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+AL+S Y + G V A R+F+ ++E D V WN++I+ Y ++ M L G
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 203 PDGYTLAGLLGGIADP-----SLLCI------GQGLHGLSHKSGLDSDSHVGSL------ 245
T + GG + +L C+ + ++ +GL + SH+G+L
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 246 --------------------LVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
L++MYSRC + A+ VF + L TW+++ISG++
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD-VKVS 344
E+ +++++ + I +A++L A+ N++ G E H Y++R D + +
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 345 SALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLA 404
++L+DMY+K G + VF M +R+ ++Y S+I G G G A F + G+
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 405 PDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYN 464
PD T A+L AC H+ LV EG +F +M+ F I+ R EHY MV L AG L++A +
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 465 LTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQK-LFQNNPADNAFKVMLSNIYAGDG 523
+ ++P A+ LL C GN+ + E A K L + P ++L+++YA G
Sbjct: 583 IFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTG 642
Query: 524 RWDDVKNLRDKMTG-GLRKMPGLSWIE 549
W + ++ ++ G++K + +E
Sbjct: 643 SWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%)
Query: 206 YTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCS 265
Y+ A LL + GQ LH SGL+ DS + LV+ YS +D A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 266 ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPG 325
+ W+ LI Y + ++ + +++++ + + D +V+ + A + G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLH 385
+HG + ++ V +ALI MY + G + +F M ER+ +S+N++I+
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG 421
EAF++ DR+ G+ T++ + G C AG
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 265/535 (49%), Gaps = 41/535 (7%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
KQ HA + + D T L+ Y I A VFD+M + V WN +I +
Sbjct: 292 EGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV 351
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
++A+ + + M +K D T A ++ A A +L + + V + D +
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
S ++ Y+K G + +A +VF+ E DL+LWN+L++ Y S +++F M+L G
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
P+ T ++ SLL GQ +D A
Sbjct: 472 VPPNVITWNLII-----LSLLRNGQ------------------------------VDEAK 496
Query: 261 RVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
+F + + P+L++W+ +++G Q G E+ +LF RK+ + ++ + L++
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 317 AQTANVRPGCEIHGYVIRHGLESD-VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
A A++ G IHGY+IR+ S V + ++L+DMY+KCG ++ VF +
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
N++IS L+G EA ++ + GL PD T + +L AC HAG +N+ EIF +
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 436 EFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAE 495
+ ++K EHY MV LL SAGE E+A L + +P D ++ +L++ CN +EL +
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVD 736
Query: 496 TVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+++KL ++ P ++ V +SN YA +G WD+V +R+ M GL+K PG SWI+
Sbjct: 737 YLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQ 791
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 231/420 (55%), Gaps = 2/420 (0%)
Query: 17 KSLLRAKQLHACLLKT--HLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
+ L KQ+HA +LK +++ + TKLV YA + + A +F K+ R+V+ W +
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
+I + A+ F ML +I PDN+ V +AC R VHG V SG
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
L S+L Y K G++ +A++VF+ I + + V WN+L+ GY + + +++FS
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
MR G P T++ L A+ + G+ H ++ +G++ D+ +G+ L++ Y +
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
++ A VF + D+VTW+ +ISGY Q G E + + + +E+ K D + +AT+++
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+ A+T N++ G E+ Y IRH ESD+ ++S ++DMY+KCG + VF E+++I
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+N++++ G + EA R+F + +G+ P+ T++ ++ + G V+E +++F +M+
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 261/533 (48%), Gaps = 9/533 (1%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
LH ++ LSQ F L+ +Y+ ++ A +FD+ R WNS+I +
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLR---LVHGGAVASGLGLDAIC 141
+ ++L M + Y V++AC N + G + +H G+ D +
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY-----GCSAAWDVGMQMFSSM 196
+AL+ Y+K G + EA ++F+ + ++V +N++ISG+ A ++F M
Sbjct: 290 RTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+ G P T + +L + L G+ +H L K+ SD +GS L+ +Y+
Sbjct: 350 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 409
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
+ + F S S D+ +W+++I + Q + E FR+L + + V+ ++++
Sbjct: 410 EDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSAC 469
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
A A + G +I GY I+ G+++ V ++ I MY+K G + VF + ++ +Y+
Sbjct: 470 ADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYS 529
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
++IS L HG A+EA +F+ + G+ P+ F +L ACCH GLV +G + FQ MK++
Sbjct: 530 AMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKND 589
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
+ I +H+ +V LLG G L +A NL S ALLS C +S + +
Sbjct: 590 YRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKR 649
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWI 548
VA++L + P + V+L NIY G + +R+ M G++K P LSWI
Sbjct: 650 VAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 187/363 (51%), Gaps = 18/363 (4%)
Query: 103 DNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF 162
D+ + + + A + + + +L HG + S L + L++ Y K + A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC 222
+ + E +++ +NSLISGY ++ M++F R + D +T AG LG + L
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
+G+ LHGL +GL + ++L+ MYS+C +D A +F D V+W++LISGY
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN---VRPGCEIHGYVIRHGLES 339
+ G E+ L K+ + L + + +VL + N + G IH Y + G+E
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL-----GLHGCASEAFRM 394
D+ V +AL+DMY+K G L I +F LMP +N+++YN++ISG +SEAF++
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 395 FDRILEKGLAPDAATFSALLGACCHAGLVNEGREI--------FQRMKDEFNIKARPEHY 446
F + +GL P +TFS +L AC A + GR+I FQ DEF A E Y
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ--SDEFIGSALIELY 403
Query: 447 VYM 449
M
Sbjct: 404 ALM 406
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/582 (24%), Positives = 262/582 (45%), Gaps = 64/582 (10%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
S++ K H ++K+ L+ + L+ +Y ++ A +FD+M R++ +NS+I
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ ++ A+ LF A++K D +T+A + C + DL + L+HG V +GL
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+ L+ YSK G + +A +F+ E D V WNSLISGY A + + + + M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 198 LVGTRPDGYTLAGLLGGIA---DPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
G Y L +L + + G +H + K G++ D V + L+ MY++
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGE------HEKVLLFFRKLIMERKKLD--S 306
+ A ++F + + ++VT++A+ISG+ Q E E LF + M+R+ L+
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF---MDMQRRGLEPSP 358
Query: 307 ILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRL 366
+ VL + + + G +IH + ++ +SD + SALI++Y+ G G+ F
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 367 MPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG 426
+++I S+ S+I + AF +F ++ + P+ T S ++ AC ++ G
Sbjct: 419 TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG 478
Query: 427 REI-----------FQRMKDE-----------------FNIKARPEHYVY--MVKLLGSA 456
+I F +K F P+ Y M+ L
Sbjct: 479 EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQH 538
Query: 457 GELEEAYNLTQSLP----EPVDKAILGALLSCCNSCGNSELAETVAQKLFQ-------NN 505
G EA N+ +S+ +P +A LG L++CC+ T K FQ N
Sbjct: 539 GSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG-----LVTQGLKYFQCMKNDYRIN 593
Query: 506 PADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGLRKMPGLSW 547
P + F ++ ++ GR D +NL ++ G + P ++W
Sbjct: 594 PNEKHFTCLV-DLLGRTGRLSDAENL--ILSSGFQDHP-VTW 631
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 16/272 (5%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
K+L +Q+HA + K + D F + L+ LYA F S + + W SMI
Sbjct: 372 KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI 431
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+++ ++A LFR + + I+P+ YT + ++ ACAD L + G A+ SG+
Sbjct: 432 DCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGID 491
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
++ +S Y+K G + AN+VF + PD+ ++++IS + + + +F SM
Sbjct: 492 AFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGL--HGLSHKSGLDSDSHVG------SLLVS 248
+ G +P+ G+L + C GL GL + + +D + + LV
Sbjct: 552 KTHGIKPNQQAFLGVL-------IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 249 MYSRCKCMDSAYRVFCSISNPD-LVTWSALIS 279
+ R + A + S D VTW AL+S
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 23/326 (7%)
Query: 154 LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM---RLVGTRPDGYTLAG 210
L A FN IA+ LV +LI+ +G + SS+ + +GY +
Sbjct: 3 LQFRAKTFFNNIAQDSLV---TLIT-----KRVGLGYRFLSSLCQPKNTALDSEGYKI-- 52
Query: 211 LLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPD 270
L A + +G+ HG KS L+ ++ + L++MY +C+ + A ++F + +
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 271 LVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHG 330
++++++LISGY+Q G +E+ + F + KLD A L + ++ G +HG
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 331 YVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASE 390
V+ +GL V + + LIDMYSKCG L + +F ER+ +S+NS+ISG G A E
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 391 AFRMFDRILEKGLAPDAATFSALLGACC---HAGLVNEGREIF---QRMKDEFNIKARPE 444
+ ++ GL ++L ACC + G + +G I ++ EF+I R
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLP 470
++ + G L+EA L +P
Sbjct: 293 ----LLDMYAKNGSLKEAIKLFSLMP 314
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 231/396 (58%), Gaps = 4/396 (1%)
Query: 158 ANRVFNGIAEP-DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG-TRPDGYTLAGLLGGI 215
A++VF+ I +P ++ +WN+LI GY ++ MR+ G PD +T L+ +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 216 ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWS 275
+ + +G+ +H + +SG S +V + L+ +Y+ C + SAY+VF + DLV W+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 276 ALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRH 335
++I+G+++ G+ E+ L + ++ + K D + ++L++ A+ + G +H Y+I+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 336 GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF 395
GL ++ S+ L+D+Y++CG + +F M ++N +S+ S+I GL ++G EA +F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 396 DRILE-KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLG 454
+ +GL P TF +L AC H G+V EG E F+RM++E+ I+ R EH+ MV LL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 455 SAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVM 514
AG++++AY +S+P + I LL C G+S+LAE ++ Q P + V+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 515 LSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
LSN+YA + RW DV+ +R +M G++K+PG S +E
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 202/409 (49%), Gaps = 17/409 (4%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLY----AATNDINSAYHVFDKMSTR-SVYLW 72
S+ + +Q+HA ++ +S K + Y + ++ A+ VF K+ +V++W
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 73 NSMIRAFALSQRFDNAVSLFRTM-LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
N++IR +A +A SL+R M + ++PD +T+ +I+A D+ + +H +
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
SG G ++L+ Y+ G V A +VF+ + E DLV WNS+I+G+ + + +
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
+++ M G +PDG+T+ LL A L +G+ +H K GL + H ++L+ +Y+
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD-SILVA 310
RC ++ A +F + + + V+W++LI G + G ++ + F+ + L I
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 311 TVLASIAQTANVRPGCEIHGYVIR----HGLESDVKVSSALIDMYSKCGFLHFGICVFRL 366
+L + + V+ G E Y R + +E ++ ++D+ ++ G + +
Sbjct: 329 GILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 367 MP-ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
MP + N++ + +++ +HG + A F RI L P+ + LL
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHSGDYVLL 432
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 256/524 (48%), Gaps = 43/524 (8%)
Query: 27 ACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFD 86
A ++KT L+QD + + + ++ A +M +V+++N++ + F
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 87 NAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALV 146
++ L+ ML + P +YT++ +++A + G H G G + L+
Sbjct: 854 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKF--GFGFHVKIQTTLI 911
Query: 147 SAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGY 206
YS G + EA +VF+ + E D + W +++S Y R V
Sbjct: 912 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAY----------------RRVLDMDSAN 955
Query: 207 TLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI 266
+LA + + + C+ G GL + ++ A +F +
Sbjct: 956 SLANQMSEKNEATSNCLINGYMGLGN-----------------------LEQAESLFNQM 992
Query: 267 SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGC 326
D+++W+ +I GYSQ + + + F K++ E D + ++TV+++ A + G
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1052
Query: 327 EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHG 386
E+H Y +++G DV + SAL+DMYSKCG L + VF +P++N+ +NS+I GL HG
Sbjct: 1053 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1112
Query: 387 CASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHY 446
A EA +MF ++ + + P+A TF ++ AC HAGLV+EGR I++ M D+++I + EHY
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 447 VYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNP 506
MV L AG + EA L ++ + I GALL C N +AE KL P
Sbjct: 1173 GGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEP 1232
Query: 507 ADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKM-PGLSWI 548
++ + +L ++YA RW DV +R +M G+ K+ PG S I
Sbjct: 1233 MNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K++H L+ D + + LV +Y+ + A VF + ++++ WNS+I A
Sbjct: 1052 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAH 1111
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL----- 137
A+ +F M +KP+ TF V AC H G V G +
Sbjct: 1112 GFAQEALKMFAKMEMESVKPNAVTFVSVFTAC-----------THAGLVDEGRRIYRSMI 1160
Query: 138 -DAICCS------ALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISG 179
D S +V +SK GL++EA + + EP+ V+W +L+ G
Sbjct: 1161 DDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 248/488 (50%), Gaps = 33/488 (6%)
Query: 95 MLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG-----------LGLDAIC-- 141
+LG KP T+ +I+ C+ L + VH SG L + A C
Sbjct: 76 LLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGS 135
Query: 142 ----------------CS--ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
CS +V+ Y+++GL+ EA ++F+ + E D W ++++GY
Sbjct: 136 LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK 195
Query: 184 AAWDVGMQMFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ + ++S M R+ +RP+ +T++ + A + G+ +HG ++GLDSD +
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
S L+ MY +C C+D A +F I D+V+W+++I Y + + F +L+ +
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE 315
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
+ + A VL + A G ++HGY+ R G + SS+L+DMY+KCG +
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
V P+ +++S+ S+I G +G EA + FD +L+ G PD TF +L AC HAGL
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL 482
V +G E F + ++ + +HY +V LL +G E+ ++ +P K + ++L
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVL 495
Query: 483 SCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRK 541
C++ GN +LAE AQ+LF+ P + V ++NIYA G+W++ +R +M G+ K
Sbjct: 496 GGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTK 555
Query: 542 MPGLSWIE 549
PG SW E
Sbjct: 556 RPGSSWTE 563
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 197/431 (45%), Gaps = 40/431 (9%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGA-DIKP 102
+V YA + A +FD+M+ + Y W +M+ + + + A+ L+ M + +P
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 103 DNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF 162
+ +T + + A A + + +HG V +GL D + S+L+ Y K G + EA +F
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC 222
+ I E D+V W S+I Y S+ W G +FS + RP+ YT AG+L AD +
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE 336
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
+G+ +HG + G D S S LV MY++C ++SA V PDLV+W++LI G +
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCA 396
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE-IHGYVIRHGLESDV 341
Q G+ ++ L +F L+ K D + VL++ V G E + +H L
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTS 456
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEK 401
+ L+D+ ++ G R +++IS E
Sbjct: 457 DHYTCLVDLLARSG---------RFEQLKSVIS-------------------------EM 482
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR-PEHYVYMVKLLGSAGELE 460
+ P ++++LG C G ++ E Q + F I+ P YV M + +AG+ E
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL---FKIEPENPVTYVTMANIYAAAGKWE 539
Query: 461 EAYNLTQSLPE 471
E + + + E
Sbjct: 540 EEGKMRKRMQE 550
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
K + R K++H +++ L D + L+ +Y I+ A ++FDK+ + V W SMI
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ S R+ SLF ++G+ +P+ YTFA V+ ACAD + + VHG G
Sbjct: 292 DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ S+LV Y+K G + A V +G +PDLV W SLI G + D ++ F +
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
GT+PD T +L L+ G + + ++ K L S + LV + +R
Sbjct: 412 LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGR 471
Query: 256 MDSAYRVFCSIS-NPDLVTWSALISGYSQCG 285
+ V + P W++++ G S G
Sbjct: 472 FEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 284 CGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKV 343
CG+ K+L +L+ KK + ++ +QT + G ++H ++ G + +
Sbjct: 65 CGQ--KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 344 SSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGL 403
+ L+ MY+KCG L VF MP R++ S+N +++G G EA ++FD + EK
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK-- 180
Query: 404 APDAATFSALL 414
D+ +++A++
Sbjct: 181 --DSYSWTAMV 189
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/577 (28%), Positives = 277/577 (48%), Gaps = 67/577 (11%)
Query: 36 QDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTM 95
+D + +V +A +++ A +F+ M + V NS++ + L+ + A+ LF+ +
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLV 155
+ D T V++ACA+ L + +H + G+ D+ S+LV+ Y+K G +
Sbjct: 182 ---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 156 HEANRVFNGIAEPD-------------------------------LVLWNSLISGYGCSA 184
A+ + I EPD ++LWNS+ISGY +
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
+ +F+ MR TR D TLA ++ L G+ +H + K GL D V S
Sbjct: 299 MKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS 357
Query: 245 LLVSMYSRC-----------------------------KC--MDSAYRVFCSISNPDLVT 273
L+ MYS+C C +D A RVF I N L++
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS 417
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
W+++ +G+SQ G + L +F ++ D + +++V+++ A +++ G ++
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFR 393
GL+SD VSS+LID+Y KCGF+ G VF M + + + +NS+ISG +G EA
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAID 537
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLL 453
+F ++ G+ P TF +L AC + GLV EGR++F+ MK + EH+ MV LL
Sbjct: 538 LFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLL 597
Query: 454 GSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKV 513
AG +EEA NL + +P VD ++ ++L C + G + + A+K+ + P ++ V
Sbjct: 598 ARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYV 657
Query: 514 MLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
LS I+A G W+ +R M + K PG SW +
Sbjct: 658 QLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 199/456 (43%), Gaps = 42/456 (9%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
++ + +L+ D + L+ YA +N + +FD+ S R V LWNSMI + +
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML---RLVHGGAVASGLGLDAI 140
A+ LF M + + D+ T A VI AC LG L + +H A GL D +
Sbjct: 299 MKMEALVLFNEMRN-ETREDSRTLAAVINAC---IGLGFLETGKQMHCHACKFGLIDDIV 354
Query: 141 CCSALVSAYSK-------------------------------LGLVHEANRVFNGIAEPD 169
S L+ YSK G + +A RVF I
Sbjct: 355 VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS 414
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
L+ WNS+ +G+ + ++ F M + D +L+ ++ A S L +G+ +
Sbjct: 415 LISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA 474
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEK 289
+ GLDSD V S L+ +Y +C ++ RVF ++ D V W+++ISGY+ G+ +
Sbjct: 475 RATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFE 534
Query: 290 VLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI-HGYVIRHGLESDVKVSSALI 348
+ F+K+ + + I VL + V G ++ + HG D + S ++
Sbjct: 535 AIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMV 594
Query: 349 DMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDA 407
D+ ++ G++ I + MP + + ++S++ G +G + + ++I+E L P+
Sbjct: 595 DLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE--LEPEN 652
Query: 408 ATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
+ L A E + +++ E N+ P
Sbjct: 653 SVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNP 688
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 191/464 (41%), Gaps = 91/464 (19%)
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
MI + S RF + S + M ++ Y + ++++C+ + R +G + G
Sbjct: 1 MILKYNSSYRFYLSSSFLQAM---EVDCRRY-YVRLLQSCSSRNRETLWRQTNGLLLKKG 56
Query: 135 -LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMF 193
L I + L+ YS+ G + A +F+ + + + WN++I GY S ++ F
Sbjct: 57 FLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF 116
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
M DGY+ ++ G A L +
Sbjct: 117 DMM----PERDGYSWNVVVSGFAKAGELSV------------------------------ 142
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
A R+F ++ D+VT ++L+ GY G E+ L F++L D+I + TVL
Sbjct: 143 -----ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF---SADAITLTTVL 194
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE---- 369
+ A+ ++ G +IH ++ G+E D K++S+L+++Y+KCG L + + E
Sbjct: 195 KACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDH 254
Query: 370 ---------------------------RNIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
R +I +NS+ISG + EA +F+ +
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE-MRNE 313
Query: 403 LAPDAATFSALLGACCHAGLVNEGREIFQR-----MKDEFNIKARPEHYVYMVKLLGSAG 457
D+ T +A++ AC G + G+++ + D+ + + ++ + G
Sbjct: 314 TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST------LLDMYSKCG 367
Query: 458 ELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
EA L + E D +L +++ SCG + A+ V +++
Sbjct: 368 SPMEACKLFSEV-ESYDTILLNSMIKVYFSCGRIDDAKRVFERI 410
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 327 EIHGYVIRHG-LESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLH 385
+ +G +++ G L S V V++ L+ MYS+ G + +F MP+RN S+N++I G
Sbjct: 47 QTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNS 106
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEH 445
G + R FD + E+ D +++ ++ AG ++ R +F M ++ +
Sbjct: 107 GEKGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLL 162
Query: 446 YVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV-AQKLFQN 504
+ Y++ G EEA L + L D L +L C + + + AQ L
Sbjct: 163 HGYILN-----GYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGG 217
Query: 505 NPADNAFKVMLSNIYA--GDGR 524
D+ L N+YA GD R
Sbjct: 218 VECDSKMNSSLVNVYAKCGDLR 239
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL +Q+ A L D ++ L+ LY + VFD M WNSMI
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML----RLVHGGAVAS 133
+A + + A+ LF+ M A I+P TF V+ AC N+ G++ +L V
Sbjct: 525 GYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTAC--NY-CGLVEEGRKLFESMKVDH 581
Query: 134 GLGLDAICCSALVSAYSKLGLVHEA-NRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
G D S +V ++ G V EA N V + D +W+S++ GC A M
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILR--GCVANGYKAMGK 639
Query: 193 FSSMRLVGTRPD 204
++ +++ P+
Sbjct: 640 KAAEKIIELEPE 651
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 156/570 (27%), Positives = 277/570 (48%), Gaps = 35/570 (6%)
Query: 15 VCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAAT--NDINSAYHVFDKMSTRSVYLW 72
VCK+ + KQLH+ + ++ +P + KL + + ++ AY +F K+ V +W
Sbjct: 43 VCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVW 102
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA-DNFDLGMLRLVHGGAV 131
N+MI+ ++ V L+ ML + PD++TF ++ D L + +H V
Sbjct: 103 NNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVV 162
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
GLG + +ALV YS GL+ A VF+ + D+ WN +ISGY ++ ++
Sbjct: 163 KFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIE 222
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
+ M P TL +L + + + +H + + + + LV+ Y+
Sbjct: 223 LLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYA 282
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGE------------------------- 286
C MD A R+F S+ D+++W++++ GY + G
Sbjct: 283 ACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDG 342
Query: 287 ------HEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
+ L FR++ D + +VL + A ++ G I Y+ ++ +++D
Sbjct: 343 YLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKND 402
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
V V +ALIDMY KCG VF M +R+ ++ +++ GL +G EA ++F ++ +
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
+ PD T+ +L AC H+G+V++ R+ F +M+ + I+ HY MV +LG AG ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 461 EAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYA 520
EAY + + +P + + GALL + +AE A+K+ + P + A +L NIYA
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 521 GDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
G RW D++ +R K+ ++K PG S IE
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 214/447 (47%), Gaps = 30/447 (6%)
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKP----DNYTFACVIRAC--ADNFDLGMLRLVHG 128
MI L F++ +S+F+ +L + I D F ++ C D F + +H
Sbjct: 1 MILRNPLKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQF-----KQLHS 55
Query: 129 GAVASGLGLDAICCSALVSAY-SKLG-LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAW 186
++ G+ + L + S+LG V A ++F I EPD+V+WN++I G+
Sbjct: 56 QSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCD 115
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIA-DPSLLCIGQGLHGLSHKSGLDSDSHVGSL 245
G++++ +M G PD +T LL G+ D L G+ LH K GL S+ +V +
Sbjct: 116 GEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNA 175
Query: 246 LVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
LV MYS C MD A VF D+ +W+ +ISGY++ E+E+ + ++
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
S+ + VL++ ++ + +H YV E +++ +AL++ Y+ CG + + +FR
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 366 LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
M R++IS+ S++ G G A FD++ + D +++ ++ AG NE
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNE 351
Query: 426 GREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDK------AILG 479
EIF+ M+ I P+ + MV +L + L + + + + +DK ++G
Sbjct: 352 SLEIFREMQSAGMI---PDEFT-MVSVLTACAHL-GSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 480 -ALLSCCNSCGNSELAETVAQKLFQNN 505
AL+ CG SE A+ V + Q +
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRD 433
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 222/398 (55%), Gaps = 10/398 (2%)
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD 217
A +F GI +P +N++I GY +++ + ++ M G PD +T LL
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 218 PSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSAL 277
+ G+ +HG K GL++D V + L++MY RC M+ + VF + + +WS++
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 278 ISGYSQCGEHEKVLLFFRKLIMER--KKLDSILVATVLASIAQTANVRPGCEIHGYVIRH 335
+S + G + LL FR + E K +S +V+ +LA A T + G IHG+++R+
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLAC-ANTGALNLGMSIHGFLLRN 263
Query: 336 GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF 395
E ++ V ++L+DMY KCG L + +F+ M +RN ++Y+++ISGL LHG A RMF
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 396 DRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGS 455
+++++GL PD + ++L AC H+GLV EGR +F M E ++ EHY +V LLG
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 456 AGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQ---NNPADNAFK 512
AG LEEA QS+P + I LS C N EL + AQ+L + +NP D
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD---Y 440
Query: 513 VMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
+++SN+Y+ WDDV R ++ GL++ PG S +E
Sbjct: 441 LLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVE 478
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 174/372 (46%), Gaps = 7/372 (1%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAA----TNDINSAYHVFDKMSTRSVYL 71
C ++ KQ+HA +K L ++ V A N +N A +F + +
Sbjct: 40 CHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFD 99
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
+N+MIR + F+ A+ + M+ +PDN+T+ C+++AC + + +HG
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
GL D ++L++ Y + G + ++ VF + W+S++S W +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 192 MFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+F M + + + L A+ L +G +HG ++ + + V + LV MY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
+C C+D A +F + + +T+SA+ISG + GE E L F K+I E + D ++
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHG-LESDVKVSSALIDMYSKCGFLHFGICVFRLMP- 368
+VL + + + V+ G + +++ G +E + L+D+ + G L + + +P
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
Query: 369 ERNIISYNSVIS 380
E+N + + + +S
Sbjct: 400 EKNDVIWRTFLS 411
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 9/253 (3%)
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
M+ A +F I +P ++ +I GY E+ L F+ +++ + D+ +L +
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
+ ++R G +IHG V + GLE+DV V ++LI+MY +CG + VF + + S+
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 376 NSVISGLGLHGCASEAFRMFDRIL-EKGLAPDAATFSALLGACCHAGLVNEGREI---FQ 431
+S++S G SE +F + E L + + + L AC + G +N G I
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 432 RMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNS 491
R E NI + +V + G L++A ++ Q + E + A++S G
Sbjct: 262 RNISELNIIVQTS----LVDMYVKCGCLDKALHIFQKM-EKRNNLTYSAMISGLALHGEG 316
Query: 492 ELAETVAQKLFQN 504
E A + K+ +
Sbjct: 317 ESALRMFSKMIKE 329
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 220/419 (52%), Gaps = 36/419 (8%)
Query: 171 VLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD--PSLLCIGQGLH 228
V W S I+ + + FS M L G P+ T LL G D +G LH
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 229 GLSHKSGLDSDS-HVGSLLVSMYS-------------------------------RCKCM 256
G + K GLD + VG+ ++ MYS R +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
D+A ++F + DL++W+A+I+G+ + G E+ LL+FR++ + K D + + L +
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
+ G +H YV+ +++V+VS++LID+Y +CG + F VF M +R ++S+N
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
SVI G +G A E+ F ++ EKG PDA TF+ L AC H GLV EG FQ MK +
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNS-ELAE 495
+ I R EHY +V L AG LE+A L QS+P ++ ++G+LL+ C++ GN+ LAE
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 496 TVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIEGSYC 553
+ + L N ++ V+LSN+YA DG+W+ +R KM G GL+K PG S IE C
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDC 455
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 160/379 (42%), Gaps = 41/379 (10%)
Query: 47 LYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYT 106
L N N ++ ++ + W S I + R A F M A ++P++ T
Sbjct: 14 LITHKNHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHIT 73
Query: 107 FACVIRACADNFDLG---MLRLVHGGAVASGLGLDAICC-SALVSAYSKLGLVHEANRVF 162
F ++ C D F G + L+HG A GL + + +A++ YSK G +A VF
Sbjct: 74 FIALLSGCGD-FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVF 132
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS---------------------------- 194
+ + + + V WN++I GY S D +MF
Sbjct: 133 DYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALL 192
Query: 195 ---SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
M++ G +PD + L + L G +H ++ V + L+ +Y
Sbjct: 193 WFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYC 252
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
RC C++ A +VF ++ +V+W+++I G++ G + L++FRK+ + K D++
Sbjct: 253 RCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 312 VLASIAQTANVRPGCEIHGYV-IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
L + + V G + + + ++ L+D+YS+ G L + + + MP
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP-- 370
Query: 371 NIISYNSVISGLGLHGCAS 389
+ N V+ G L C++
Sbjct: 371 --MKPNEVVIGSLLAACSN 387
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 33/274 (12%)
Query: 48 YAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTF 107
Y + +++A +FDKM R + W +MI F + A+ FR M + +KPD
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 108 ACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE 167
+ AC + L VH ++ + ++L+ Y + G V A +VF + +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
+V WNS+I G+ + + F M+ G +PD T G
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG----------------- 312
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEH 287
L + SHVG L+ + M YR+ +P + + L+ YS+ G
Sbjct: 313 -------ALTACSHVG-LVEEGLRYFQIMKCDYRI-----SPRIEHYGCLVDLYSRAGRL 359
Query: 288 EKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
E L + + M K + +++ ++LA+ + N
Sbjct: 360 EDALKLVQSMPM---KPNEVVIGSLLAACSNHGN 390
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
+H +L + + L+ LY + A VF M R+V WNS+I FA +
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC--- 141
++ FR M KPD TF + AC+ H G V GL I
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACS-----------HVGLVEEGLRYFQIMKCD 336
Query: 142 ---------CSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLIS 178
LV YS+ G + +A ++ + +P+ V+ SL++
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 269/544 (49%), Gaps = 52/544 (9%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAAT----NDINSAYHVFDKMSTRSVYL 71
CK++ KQ+HA ++ L + +L+ Y+A+ + A+ +FD++ V +
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
N ++R A S + + VSL+ M + PD YTF V++AC+ HG V
Sbjct: 80 CNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVV 139
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
G L+ +AL+ ++ G + A+ +F+ A+ V W+S+ SGY D M+
Sbjct: 140 RHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMR 199
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
+F M D +++++
Sbjct: 200 LFDEMPY---------------------------------------KDQVAWNVMITGCL 220
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
+CK MDSA +F + D+VTW+A+ISGY CG ++ L F+++ + D + + +
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 312 VLASIAQTANVRPGCEIHGYVIRHG-LESDVKVSS----ALIDMYSKCGFLHFGICVFRL 366
+L++ A ++ G +H Y++ + S + V + ALIDMY+KCG + I VFR
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 367 MPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG 426
+ +R++ ++N++I GL LH A + MF+ + + P+ TF ++ AC H+G V+EG
Sbjct: 341 VKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 427 REIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCN 486
R+ F M+D +NI+ +HY MV +LG AG+LEEA+ +S+ + + LL C
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACK 459
Query: 487 SCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGLRKMP-GL 545
GN EL + +KL ++ V+LSNIYA G+WD V+ +R K P G+
Sbjct: 460 IYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGV 519
Query: 546 SWIE 549
S IE
Sbjct: 520 SLIE 523
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 32/208 (15%)
Query: 15 VCKSLLRAKQLHACLLKTHLSQDPFYA-----TKLVRLYAATNDINSAYHVFDKMSTRSV 69
V L K+LH +L+T Y L+ +YA I+ A VF + R +
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
Query: 70 YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
WN++I AL + ++ +F M + P+ TF VI AC+ H G
Sbjct: 347 STWNTLIVGLAL-HHAEGSIEMFEEMQRLKVWPNEVTFIGVILACS-----------HSG 394
Query: 130 AVASG-----LGLDAICCSALVSAY-------SKLGLVHEANRVFNGIA-EPDLVLWNSL 176
V G L D + Y + G + EA + EP+ ++W +L
Sbjct: 395 RVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 454
Query: 177 ISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
+ C +V + +++ +L+ R D
Sbjct: 455 LG--ACKIYGNVELGKYANEKLLSMRKD 480
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 217/393 (55%), Gaps = 1/393 (0%)
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD 217
A +F ++EPD+V++NS+ GY +F + G PD YT LL A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 218 PSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSAL 277
L G+ LH LS K GLD + +V L++MY+ C+ +DSA VF I P +V ++A+
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 278 ISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGL 337
I+GY++ + L FR++ + K + I + +VL+S A ++ G IH Y +H
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 338 ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
VKV++ALIDM++KCG L + +F M ++ +++++I HG A ++ MF+R
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAG 457
+ + + PD TF LL AC H G V EGR+ F +M +F I +HY MV LL AG
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 458 ELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSN 517
LE+AY LP + LL+ C+S N +LAE V++++F+ + + V+LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 518 IYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+YA + +W+ V +LR M K+PG S IE
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 20/397 (5%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAAT---NDINSAYHVFDKMSTRSVYLW 72
C SL Q+ A +K+H+ +D + KL+ + + ++ A H+F+ MS + ++
Sbjct: 39 CNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIF 97
Query: 73 NSMIRAFALSQRFDNAV---SLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
NSM R ++ RF N + SLF +L I PDNYTF +++ACA L R +H
Sbjct: 98 NSMARGYS---RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVG 189
++ GL + C L++ Y++ V A VF+ I EP +V +N++I+GY +
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
+ +F M+ +P+ TL +L A L +G+ +H + K V + L+ M
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274
Query: 250 YSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILV 309
+++C +D A +F + D WSA+I Y+ G+ EK +L F ++ E + D I
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334
Query: 310 ATVLASIAQTANVRPGCEIHGYVI-RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
+L + + T V G + ++ + G+ +K +++D+ S+ G L +P
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
Query: 369 ERNIISYNSVISGLGLHGCASE-----AFRMFDRILE 400
IS ++ + L C+S A ++ +RI E
Sbjct: 395 ----ISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 137/291 (47%), Gaps = 3/291 (1%)
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
M A +F ++S PD+V ++++ GYS+ +V F +++ + D+ ++L +
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
A + G ++H ++ GL+ +V V LI+MY++C + CVF + E ++ Y
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
N++I+G +EA +F + K L P+ T ++L +C G ++ G+ I + K
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 436 EFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAE 495
K + ++ + G L++A ++ + + +A +++ N G +E +
Sbjct: 259 HSFCKYVKVNTA-LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH-GKAEKSM 316
Query: 496 TVAQKLFQNNPADNAFKVM-LSNIYAGDGRWDDVKNLRDKMTGGLRKMPGL 545
+ +++ N + + L N + GR ++ + +M +P +
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 279/528 (52%), Gaps = 16/528 (3%)
Query: 14 NVCKSL-LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
+ C+SL +++H ++++ ++ +YA ++ + SA +FD+MS R V W
Sbjct: 135 HACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISW 193
Query: 73 NSMIRAFALSQRFDNAVSLFRTML-GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
+ +IR++ S+ + LF+ M+ A +PD T V++AC D+ + R VHG ++
Sbjct: 194 SVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSI 253
Query: 132 ASGLGL-DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
G L D C++L+ YSK V A RVF+ ++V WNS+++G+ + +D +
Sbjct: 254 RRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEAL 313
Query: 191 QMFSSMRLVGTRPDGYTLAGLLG--GIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
+MF M D T+ LL + L C + +HG+ + G +S+ S L+
Sbjct: 314 EMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC--KSIHGVIIRRGYESNEVALSSLID 371
Query: 249 MYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
Y+ C +D A V S++ D+V+ S +ISG + G ++ + F + R ++I
Sbjct: 372 AYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAIT 428
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLE-SDVKVSSALIDMYSKCGFLHFGICVFRLM 367
V ++L + + +A++R HG IR L +D+ V ++++D Y+KCG + F +
Sbjct: 429 VISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQI 488
Query: 368 PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
E+NIIS+ +IS ++G +A +FD + +KG P+A T+ A L AC H GLV +G
Sbjct: 489 TEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGL 548
Query: 428 EIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVD--KAILGALLSCC 485
IF+ M +E + K +HY +V +L AGE++ A L ++LPE V + GA+LS C
Sbjct: 549 MIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
Query: 486 -NSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLR 532
N + V ++ + P ++ ++ S+ +A + W+DV +R
Sbjct: 608 RNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMR 655
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 183/382 (47%), Gaps = 10/382 (2%)
Query: 39 FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
F + Y D+ S FD M++R WN ++ + + F +
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 99 DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL-GLDAICCSALVSAYSKLGLVHE 157
+P+ T VI AC + G +HG + SG G+ ++ S L L
Sbjct: 122 GFEPNTSTLVLVIHACRSLWFDG--EKIHGYVIRSGFCGISSVQNSILCMYADSDSL--S 177
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM-RLVGTRPDGYTLAGLLGGIA 216
A ++F+ ++E D++ W+ +I Y S VG+++F M T PD T+ +L
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 217 DPSLLCIGQGLHGLSHKSGLD-SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWS 275
+ +G+ +HG S + G D +D V + L+ MYS+ +DSA+RVF + ++V+W+
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 276 ALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRH 335
++++G+ +++ L F ++ E ++D + V ++L P IHG +IR
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 336 GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF 395
G ES+ S+LID Y+ C + V M ++++S +++ISGL G + EA +F
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 396 DRILEKGLAPDAATFSALLGAC 417
+ + P+A T +LL AC
Sbjct: 418 CHMRD---TPNAITVISLLNAC 436
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 244/474 (51%), Gaps = 38/474 (8%)
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG--------LDAICCSALVS 147
+ + ++ + ++RA + L+ VH + +G G L + CSA
Sbjct: 1 MTTKVAANSAAYEAIVRAGPR---VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAI 57
Query: 148 AYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG-------CSAAWDVGMQMFSSMRLVG 200
AY+ L +F + PD L+NS+I C A + +M SS
Sbjct: 58 AYTHL--------LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYY---RRMLSS----N 102
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
P YT ++ AD S L IG+G+H + SG D++V + LV+ YS+C M+ A
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGAR 162
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+VF + +V W++L+SG+ Q G ++ + F ++ + DS ++L++ AQT
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
V G +H Y+I GL+ +VK+ +ALI++YS+CG + VF M E N+ ++ ++IS
Sbjct: 223 AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMIS 282
Query: 381 GLGLHGCASEAFRMFDRILEK-GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
G HG +A +F+++ + G P+ TF A+L AC HAGLV EGR +++RM + +
Sbjct: 283 AYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRL 342
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLP---EPVDKAILGALLSCCNSCGNSELAET 496
EH+V MV +LG AG L+EAY L + A+ A+L C N +L
Sbjct: 343 IPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVE 402
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRD-KMTGGLRKMPGLSWIE 549
+A++L P + VMLSNIYA G+ D+V ++RD M LRK G S IE
Sbjct: 403 IAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIE 456
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 215/448 (47%), Gaps = 41/448 (9%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q+HA L+ T + TKL+ L + I + +F + +L+NS+I++ +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ + V+ +R ML +++ P NYTF VI++CAD L + + VH AV SG GLD
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ALV+ YSK G + A +VF+ + E +V WNSL+SG+ + D +Q+F MR G
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
PD T LL A + +G +H GLD + +G+ L+++YSRC + A V
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL-DSILVATVLASIAQTAN 321
F + ++ W+A+IS Y G ++ + F K+ + + +++ VL++ A
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 322 VRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
V G ++ + + + L V+ ++DM + GFL
Sbjct: 326 VEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFL----------------------- 362
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
EA++ ++ G A A ++A+LGAC + G EI +R+ I
Sbjct: 363 --------DEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL-----IA 409
Query: 441 ARPE---HYVYMVKLLGSAGELEEAYNL 465
P+ H+V + + +G+ +E ++
Sbjct: 410 LEPDNPGHHVMLSNIYALSGKTDEVSHI 437
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 249/509 (48%), Gaps = 41/509 (8%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLF-RTMLGADI 100
+ +V Y I A +FD+M+ R+V W +MI + + F++ LF R D+
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 101 KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANR 160
K ++ T A + +AC D +HG L D ++L+S YSKLG + EA
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
VF + D V WNSLI+G ++F M +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM-------------------PGKDM 372
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
+ + G S K + KC++ +F + D +TW+A+IS
Sbjct: 373 VSWTDMIKGFSGKGEIS----------------KCVE----LFGMMPEKDNITWTAMISA 412
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
+ G +E+ L +F K++ + +S ++VL++ A A++ G +IHG V++ + +D
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+ V ++L+ MY KCG + +F + E NI+SYN++ISG +G +A ++F +
Sbjct: 473 LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
G P+ TF ALL AC H G V+ G + F+ MK +NI+ P+HY MV LLG +G L+
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLD 592
Query: 461 EAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYA 520
+A NL ++P + G+LLS + +LAE A+KL + P V+LS +Y+
Sbjct: 593 DASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYS 652
Query: 521 GDGRWDDVKNLRD-KMTGGLRKMPGLSWI 548
G+ D + + K + ++K PG SWI
Sbjct: 653 IIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 163/399 (40%), Gaps = 46/399 (11%)
Query: 16 CKSLLRAK---QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
C+ +R + Q+H + + L D F L+ +Y+ + A VF M + W
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSW 344
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
NS+I ++ A LF M G D+
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGKDM-------------------------------- 372
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
+ + ++ +S G + + +F + E D + W ++IS + + ++ +
Sbjct: 373 -------VSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCW 425
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
F M P+ YT + +L A + L G +HG K + +D V + LVSMY +
Sbjct: 426 FHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCK 485
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
C + AY++F IS P++V+++ +ISGYS G +K L F L K+ + + +
Sbjct: 486 CGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 313 LASIAQTANVRPGCE-IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ER 370
L++ V G + + +E + ++D+ + G L + MP +
Sbjct: 546 LSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKP 605
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAAT 409
+ + S++S H A +++E L PD+AT
Sbjct: 606 HSGVWGSLLSASKTHLRVDLAELAAKKLIE--LEPDSAT 642
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 166/379 (43%), Gaps = 67/379 (17%)
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG----CSAAWDVGMQM----- 192
C++ +S +++ G + EA +F ++ +V W ++IS Y S AW V +M
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 193 --FSSM--RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDS---------- 238
+++M ++ + D L I + + + + G D
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 239 ---DSHVGSLLVSMYSRCKCMDSAYRVF----------CS-------------------- 265
DS ++L+S Y R + A RVF CS
Sbjct: 173 KFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFD 232
Query: 266 -ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVR 323
++ +++TW+A+I GY + G E F ++ E K++S +A + + R
Sbjct: 233 RMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYR 292
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
G +IHG V R LE D+ + ++L+ MYSK G++ VF +M ++ +S+NS+I+GL
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
SEA+ +F+++ K D +++ ++ G +++ E+F M ++ NI
Sbjct: 353 QRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT--- 405
Query: 444 EHYVYMVKLLGSAGELEEA 462
+ M+ S G EEA
Sbjct: 406 --WTAMISAFVSNGYYEEA 422
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 162/576 (28%), Positives = 278/576 (48%), Gaps = 50/576 (8%)
Query: 16 CKSLLRAKQLHACLL---KTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
C L +AKQ+HA L+ HL + T + N + + + + W
Sbjct: 13 CVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSW 72
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
++R + ++F V ++ M + I P ++ V+RAC ++ + +H A+
Sbjct: 73 GCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALK 132
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ- 191
+GL + LV YS+LG + A + F+ IAE + V WNSL+ GY S D +
Sbjct: 133 NGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRV 192
Query: 192 ------------------------------MFSSMRLVGTRPDGYTLAGLLGGIADPSLL 221
+FS+M L P + + L+GG + +
Sbjct: 193 FDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPL--KSPASWNI--LIGGYVNCREM 248
Query: 222 CIGQG-LHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
+ + + K+G+ + ++S Y++ + SA +F +S D + + A+I+
Sbjct: 249 KLARTYFDAMPQKNGVSWIT-----MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 281 YSQCGEHEKVLLFFRKLIMERK---KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGL 337
Y+Q G+ + L F ++ +ER + D I +++V+++ +Q N G + Y+ HG+
Sbjct: 304 YTQNGKPKDALKLFAQM-LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGI 362
Query: 338 ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
+ D +S++LID+Y K G +F + +++ +SY+++I G G++G A+EA +F
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTA 422
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAG 457
++EK + P+ TF+ LL A H+GLV EG + F MKD N++ +HY MV +LG AG
Sbjct: 423 MIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH-NLEPSADHYGIMVDMLGRAG 481
Query: 458 ELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSN 517
LEEAY L +S+P + + GALL N E E + + L+
Sbjct: 482 RLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAM 541
Query: 518 IYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIEGSY 552
IY+ GRWDD + +RD + L K G SW+EGSY
Sbjct: 542 IYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVEGSY 577
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/529 (27%), Positives = 258/529 (48%), Gaps = 2/529 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K +H+ ++ + + T LV Y+ + + A V + + V+LW S++ F +
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
R AV F M ++P+N+T++ ++ C+ L + +H + G
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 143 SALVSAYSKLGLVH-EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+ALV Y K EA+RVF + P++V W +LI G + M
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
P+ TL+G+L + + +H + +D + VG+ LV Y+ + +D A+
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
V S+ D +T+++L++ +++ G+HE L + + ++D + + +++ A
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
+ G +H Y ++ G V ++L+DMYSKCG L VF + +++S+N ++SG
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKA 441
L +G S A F+ + K PD+ TF LL AC + L + G E FQ MK +NI+
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 442 RPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
+ EHYV++V +LG AG LEEA + +++ + I LL C GN L E +A K
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKG 723
Query: 502 FQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGG-LRKMPGLSWIE 549
P+D A ++L+++Y G+ + + R+ MT L K G S +E
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVE 772
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 243/510 (47%), Gaps = 24/510 (4%)
Query: 10 SELSNVCKSLLR------------AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSA 57
+EL N+ KS +R +H ++K L ++ L+ LY T+ I +A
Sbjct: 18 NELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNA 77
Query: 58 YHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN 117
+FD+MS R+V+ W MI AF SQ F +A+SLF M+ + P+ +TF+ V+R+CA
Sbjct: 78 RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137
Query: 118 FDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLI 177
D+ VHG + +G +++ S+L YSK G EA +F+ + D + W +I
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 178 SGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLD 237
S + W +Q +S M G P+ +T LLG + L G+ +H G+
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE-FGKTIHSNIIVRGIP 256
Query: 238 SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKL 297
+ + + LV YS+ M+ A RV S D+ W++++SG+ + ++ + F ++
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 298 IMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL 357
+ ++ + +L+ + ++ G +IH I+ G E V +AL+DMY KC
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 358 HFGIC-VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
VF M N++S+ ++I GL HG + F + ++++ + P+ T S +L A
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 417 CCHAGLVNEGREI----FQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEP 472
C V EI +R D + +V S+ +++ A+N+ +S+
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS-----LVDAYASSRKVDYAWNVIRSMKRR 491
Query: 473 VDKAILGALLSCCNSCGNSELAETVAQKLF 502
D +L++ N G E+A +V ++
Sbjct: 492 -DNITYTSLVTRFNELGKHEMALSVINYMY 520
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
R ++HA LL+ H+ + LV YA++ ++ A++V M R + S++ F
Sbjct: 445 RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFN 504
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
+ + A+S+ M G I+ D + I A A+ L + +H +V SG A
Sbjct: 505 ELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAAS 564
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
++LV YSK G + +A +VF IA PD+V WN L+SG + + F MR+
Sbjct: 565 VLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKE 624
Query: 201 TRPDGYTLAGLLGGIADPSLLCIG 224
T PD T LL ++ L +G
Sbjct: 625 TEPDSVTFLILLSACSNGRLTDLG 648
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L K LH +K+ S LV +Y+ + A VF++++T V WN ++
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN--FDLGM 122
A + +A+S F M + +PD+ TF ++ AC++ DLG+
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGL 649
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 238/459 (51%), Gaps = 7/459 (1%)
Query: 95 MLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGL 154
MLG ++ Y ++ AC D L + VH + + + L+ Y K
Sbjct: 45 MLGPEMGFHGYD--ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 102
Query: 155 VHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG 214
+ +A +V + + E ++V W ++IS Y + + +F+ M +P+ +T A +L
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 215 IADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTW 274
S L +G+ +HGL K DS VGS L+ MY++ + A +F + D+V+
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 275 SALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
+A+I+GY+Q G E+ L F +L E + + A++L +++ A + G + H +V+R
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRM 394
L + ++LIDMYSKCG L + +F MPER IS+N+++ G HG E +
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 395 FDRIL--EKGLAPDAATFSALLGACCHAGLVNEGREIFQRM-KDEFNIKARPEHYVYMVK 451
F R++ EK + PDA T A+L C H + + G IF M E+ K EHY +V
Sbjct: 343 F-RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVD 401
Query: 452 LLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAF 511
+LG AG ++EA+ + +P +LG+LL C + ++ E+V ++L + P +
Sbjct: 402 MLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGN 461
Query: 512 KVMLSNIYAGDGRWDDVKNLRD-KMTGGLRKMPGLSWIE 549
V+LSN+YA GRW DV N+R M + K PG SWI+
Sbjct: 462 YVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 216/461 (46%), Gaps = 44/461 (9%)
Query: 12 LSNVC---KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRS 68
L N C ++L +++HA ++KT + T+L+ Y + + A V D+M ++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHG 128
V W +MI ++ + A+++F M+ +D KP+ +TFA V+ +C LG+ + +HG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDV 188
V S+L+ Y+K G + EA +F + E D+V ++I+GY +
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
++MF + G P+ T A LL ++ +LL G+ H + L + + + L+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 249 MYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK-KLDSI 307
MYS+C + A R+F ++ ++W+A++ GYS+ G +VL FR + E++ K D++
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
+ VL+ GC HG + GL ++ + +K G H+G
Sbjct: 358 TLLAVLS----------GCS-HGRMEDTGL--NIFDGMVAGEYGTKPGTEHYG------- 397
Query: 368 PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGR 427
++ LG G EAF R+ K P A +LLGAC V+ G
Sbjct: 398 ---------CIVDMLGRAGRIDEAFEFIKRMPSK---PTAGVLGSLLGACRVHLSVDIGE 445
Query: 428 EIFQRMKDEFNIKARPE---HYVYMVKLLGSAGELEEAYNL 465
+ +R+ I+ PE +YV + L SAG + N+
Sbjct: 446 SVGRRL-----IEIEPENAGNYVILSNLYASAGRWADVNNV 481
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 3/278 (1%)
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
M ++G + LL D L GQ +H K+ +++ + L+ Y +C
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
C++ A +V + ++V+W+A+IS YSQ G + L F +++ K + ATVL
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
S + + + G +IHG +++ +S + V S+L+DMY+K G + +F +PER+++S
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVS 221
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF-QRM 433
++I+G G EA MF R+ +G++P+ T+++LL A L++ G++ +
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 434 KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE 471
+ E A ++ ++ + G L A L ++PE
Sbjct: 282 RRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMPE 317
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/515 (30%), Positives = 255/515 (49%), Gaps = 52/515 (10%)
Query: 39 FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS-QRFDNAVSLFRTMLG 97
F K++ + DI+ A VF M ++ WNS++ + R A LF +
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 98 ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL-DAICCSALVSAYSKLGLVH 156
D N +C +R NF+ + + DA + +++ Y++ G +
Sbjct: 122 PDTFSYNIMLSCYVRNV--NFE-------KAQSFFDRMPFKDAASWNTMITGYARRGEME 172
Query: 157 EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA 216
+A +F + E + V WN++ISGY + F +A + G +A
Sbjct: 173 KARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFK-------------VAPVRGVVA 219
Query: 217 DPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWS 275
+ +++ Y + K ++ A +F ++ N +LVTW+
Sbjct: 220 --------------------------WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 276 ALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRH 335
A+ISGY + E L FR ++ E + +S +++ L ++ + ++ G +IH V +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 336 GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF 395
L +DV ++LI MY KCG L +F +M +++++++N++ISG HG A +A +F
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 396 DRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGS 455
+++ + PD TF A+L AC HAGLVN G F+ M ++ ++ +P+HY MV LLG
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Query: 456 AGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVML 515
AG+LEEA L +S+P A+ G LL C N ELAE A+KL Q N + A V L
Sbjct: 434 AGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQL 493
Query: 516 SNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
+NIYA RW+DV +R +M + K+PG SWIE
Sbjct: 494 ANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIE 528
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 182/415 (43%), Gaps = 46/415 (11%)
Query: 5 IQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM 64
I W +S L + K R + H L D F ++ Y + A FD+M
Sbjct: 93 ITW-NSLLIGISKDPSRMMEAHQ-LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM 150
Query: 65 STRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLR 124
+ WN+MI +A + A LF +M+ + N + I C D + +
Sbjct: 151 PFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE-CGD-----LEK 204
Query: 125 LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCS 183
H VA G+ + +A+++ Y K V A +F + +LV WN++ISGY +
Sbjct: 205 ASHFFKVAPVRGV--VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 262
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ + G+++F +M G RP+ L+ L G ++ S L +G+ +H + KS L +D
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ L+SMY +C + A+++F + D+V W+A+ISGY+Q G +K L FR++I + +
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 382
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGIC 362
D I VL + V G ++R + +E + ++D+ + G L +
Sbjct: 383 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 442
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+ R MP R P AA F LLGAC
Sbjct: 443 LIRSMPFR----------------------------------PHAAVFGTLLGAC 463
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 253/513 (49%), Gaps = 18/513 (3%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIK 101
TK++ Y +N + A ++FD+M R V WNSMI + AV LF M +
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 102 PDNYTFACVIRACADNFDLGML----RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE 157
++ ++ C F G + RL + V D +++V Y + G V +
Sbjct: 129 ---VSWTAMVNGC---FRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDD 177
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD 217
A ++F + +++ W ++I G + + +F +M + ++ A+
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 218 PSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSAL 277
+G +HGL K G + +V + L++ Y+ CK + + +VF + + W+AL
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 278 ISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGL 337
+SGYS +HE L F ++ + A+ L S + + G E+HG ++ GL
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 338 ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
E+D V ++L+ MYS G ++ + VF + +++I+S+NS+I G HG AF +F +
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFN-IKARPEHYVYMVKLLGSA 456
++ PD TF+ LL AC H G + +GR++F M N I + +HY MV +LG
Sbjct: 418 MIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRC 477
Query: 457 GELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLS 516
G+L+EA L + + ++ + ALLS C + + E A +F + +A V+LS
Sbjct: 478 GKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLS 537
Query: 517 NIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWI 548
NIYA GRW +V LR KM G+ K PG SW+
Sbjct: 538 NIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 12/273 (4%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H ++K + + + L+ YA I + VFD+ V +W +++ ++L++
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
+ ++A+S+F ML I P+ TFA + +C+ L + +HG AV GL DA +
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
+LV YS G V++A VF I + +V WNS+I G +F M + P
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLH-----GLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
D T GLL + L G+ L G++H +D + +V + RC +
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH---IDRKIQHYTCMVDILGRCGKLKE 482
Query: 259 AYRVFCS-ISNPDLVTWSALISGYSQCGEHEKV 290
A + + P+ + W AL+S C H V
Sbjct: 483 AEELIERMVVKPNEMVWLALLSA---CRMHSDV 512
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
K++H +K L D F LV +Y+ + ++N A VF K+ +S+ WNS+I A
Sbjct: 345 GKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ 404
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA 115
R A +F M+ + +PD TF ++ AC+
Sbjct: 405 HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACS 438
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 223/430 (51%), Gaps = 3/430 (0%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGC 182
L+ +H + +G + L+ +G + A +VF+ + +P + LWN+L GY
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ + ++ MR +G RPD +T ++ I+ G LH K G V
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ LV MY + + SA +F S+ DLV W+A ++ Q G L +F K+ +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
+ DS V ++L++ Q ++ G EI+ + ++ ++ V +A +DM+ KCG
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
+F M +RN++S++++I G ++G + EA +F + +GL P+ TF +L AC HAGL
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 423 VNEGREIFQRM--KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGA 480
VNEG+ F M ++ N++ R EHY MV LLG +G LEEAY + +P D I GA
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 481 LLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GL 539
LL C + L + VA L + P ++ V+LSNIYA G+WD V +R KM G
Sbjct: 387 LLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGT 446
Query: 540 RKMPGLSWIE 549
+K+ S +E
Sbjct: 447 KKVAAYSSVE 456
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 182/396 (45%), Gaps = 6/396 (1%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K++HA +L+T S+ T+L+ D+ A VFD+M ++LWN++ + + +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
Q ++ L++ M ++PD +T+ V++A + D +H V G G I
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ LV Y K G + A +F + DLV WN+ ++ + + ++ F+ M +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
D +T+ +L L IG+ ++ + K +D + V + + M+ +C ++A +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
F + ++V+WS +I GY+ G+ + L F + E + + + VL++ + V
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 323 RPGCEIHGYVIR---HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSV 378
G +++ LE + + ++D+ + G L + MP E + + ++
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
+ +H ++ D ++E APD ++ LL
Sbjct: 388 LGACAVHRDMILGQKVADVLVET--APDIGSYHVLL 421
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 232/428 (54%), Gaps = 8/428 (1%)
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAA 185
+HG V SGL L + + L++ YSK L ++ R F + W+S+IS + +
Sbjct: 37 LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNEL 96
Query: 186 WDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSL 245
+ ++ M RPD + L A S IG+ +H LS K+G D+D VGS
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 246 LVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
LV MY++C + A ++F + ++VTWS ++ GY+Q GE+E+ L F++ + E ++
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
++V++ A + + G +IHG I+ +S V S+L+ +YSKCG VF
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFN 276
Query: 366 LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+P +N+ +N+++ H + +F R+ G+ P+ TF +L AC HAGLV+E
Sbjct: 277 EVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDE 336
Query: 426 GREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCC 485
GR F +MK E I+ +HY +V +LG AG L+EA + ++P +++ GALL+ C
Sbjct: 337 GRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSC 395
Query: 486 NSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDV----KNLRDKMTGGLRK 541
N+ELA A K+F+ P + + LSN YA DGR++D K LRD+ G +K
Sbjct: 396 TVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR---GEKK 452
Query: 542 MPGLSWIE 549
GLSW+E
Sbjct: 453 ETGLSWVE 460
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 191/389 (49%), Gaps = 5/389 (1%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+S ++ QLH ++K+ LS P A L+ Y+ + + F+ +S W+S+I
Sbjct: 29 RSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSII 88
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA--DNFDLGMLRLVHGGAVASG 134
FA ++ ++ + M+ +++PD++ ++CA D+G R VH ++ +G
Sbjct: 89 SCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIG--RSVHCLSMKTG 146
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
D S+LV Y+K G + A ++F+ + + ++V W+ ++ GY + + +F
Sbjct: 147 YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFK 206
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK 254
+ Y+ + ++ A+ +LL +G+ +HGLS KS DS S VGS LVS+YS+C
Sbjct: 207 EALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
+ AY+VF + +L W+A++ Y+Q +KV+ F+++ + K + I VL
Sbjct: 267 VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+ + V G + +E K ++L+DM + G L + V MP S
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 375 -YNSVISGLGLHGCASEAFRMFDRILEKG 402
+ ++++ +H A D++ E G
Sbjct: 387 VWGALLTSCTVHKNTELAAFAADKVFELG 415
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 265/518 (51%), Gaps = 19/518 (3%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRS-VYLWNSMIRAFALSQRFDNAVSLFRTMLGAD- 99
TK + + A+ I A +FD+ R +L NSMI+A+ ++++ ++ +L+R +
Sbjct: 14 TKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETC 73
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
PDN+TF + ++C+ + + +H G D + +V Y+K G + A
Sbjct: 74 FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCAR 133
Query: 160 RVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPS 219
F+ + V W +LISGY D+ ++F M V D ++ G
Sbjct: 134 NAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSG 190
Query: 220 LLCIGQGLHG-LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALI 278
+ + L ++HK+ + + ++ Y K +D+A ++F ++ +LV+W+ +I
Sbjct: 191 DMTSARRLFDEMTHKTVI-----TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 279 SGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGL 337
GY Q + ++ + F+++ D + + +VL +I+ T + G H +V R L
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 338 ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
+ VKV +A++DMYSKCG + +F MPE+ + S+N++I G L+G A A +F
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAG 457
++ + PD T A++ AC H GLV EGR+ F M+ E + A+ EHY MV LLG AG
Sbjct: 366 MMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAG 423
Query: 458 ELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSN 517
L+EA +L ++P + IL + LS C + E AE + +K + P ++ V+L N
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRN 483
Query: 518 IYAGDGRWDD---VKNLRDKMTGGLRKMPGLSWIEGSY 552
+YA D RWDD VKN+ K +K G S IE +Y
Sbjct: 484 LYAADKRWDDFGMVKNVMRKNQA--KKEVGCSLIEINY 519
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 168/386 (43%), Gaps = 24/386 (6%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
QLH+ + + D + +T +V +YA + A + FD+M RS W ++I +
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL------ 137
D A LF M + + A D F V G + S L
Sbjct: 159 ELDLASKLFDQM-------PHVKDVVIYNAMMDGF-------VKSGDMTSARRLFDEMTH 204
Query: 138 -DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
I + ++ Y + + A ++F+ + E +LV WN++I GY + G+++F M
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 197 RLVGT-RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
+ + PD T+ +L I+D L +G+ H + LD V + ++ MYS+C
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
++ A R+F + + +W+A+I GY+ G L F +++E K D I + V+ +
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKP-DEITMLAVITA 383
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIIS 374
V G + + GL + ++ ++D+ + G L + MP E N I
Sbjct: 384 CNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 375 YNSVISGLGLHGCASEAFRMFDRILE 400
+S +S G + A R+ + +E
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVE 469
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 275/573 (47%), Gaps = 43/573 (7%)
Query: 16 CKSLLRAKQLHACLL-KTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
C+S +Q+H+ ++ ++ L F LV Y I A +F +M ++ + WN
Sbjct: 243 CRS---GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 75 MIRAFALSQRFDNAVSLFRTML-GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA- 132
+I +A + + A LF ++ D+ PD+ T ++ CA DL + +H +
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
S L D +AL+S Y++ G A F+ ++ D++ WN+++ + S + +
Sbjct: 360 SYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL 419
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGL---DSDSHVGSLLVSM 249
+ D T+ LL + + + +HG S K+GL + + +G+ L+
Sbjct: 420 LHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 250 YSRCKCMDSAYRVFCSISNP-DLVTWSALISGYSQCGEHEKV-LLF-------------- 293
Y++C ++ A+++F +S LV++++L+SGY G H+ +LF
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 294 ----------------FRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGL 337
FR++ + +++ + +L AQ A++ + HGY+IR GL
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL 599
Query: 338 ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
D+++ L+D+Y+KCG L VF+ R+++ + ++++G +HG EA ++
Sbjct: 600 -GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSH 658
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAG 457
+ E + PD + +L ACCHAGL+ +G +I+ ++ +K E Y V L+ G
Sbjct: 659 MTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGG 718
Query: 458 ELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSN 517
L++AY+ +P + I G LL C + +L +VA L Q D V++SN
Sbjct: 719 RLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISN 778
Query: 518 IYAGDGRWDDVKNLRDKMTGGLRKMP-GLSWIE 549
+YA D +W+ V LR+ M K P G SW+E
Sbjct: 779 MYAADAKWEGVMELRNLMKKKEMKKPAGCSWLE 811
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 245/532 (46%), Gaps = 31/532 (5%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDI-NSAYHVFDKMSTRSVYLWNSMIRAFAL 81
K +H+ ++K L +D LV +YA I AY FD ++ + V WN++I F+
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD---NFDLGMLRLVHGGAVA-SGLGL 137
+ +A F ML +P+ T A V+ CA N R +H V S L
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
C++LVS Y ++G + EA +F + DLV WN +I+GY + W Q+F ++
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 198 LVG-TRPDGYTLAGLLGGIADPSLLCIGQGLHG-LSHKSGLDSDSHVGSLLVSMYSRCKC 255
G PD T+ +L A + L G+ +H + S L D+ VG+ L+S Y+R
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+AY F +S D+++W+A++ ++ + + L L+ E LDS+ + ++L
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441
Query: 316 IAQTANVRPGCEIHGYVIRHGL---ESDVKVSSALIDMYSKCGFLHFGICVFRLMPE-RN 371
+ E+HGY ++ GL E + K+ +AL+D Y+KCG + + +F + E R
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRT 501
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
++SYNS++SG G +A +F + L + +CC + REI
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 432 RMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPV-----DKAILGALLSCCN 486
R RP + V ++ LL +L + + Q + D + G LL
Sbjct: 562 R-------GMRP-NTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYA 613
Query: 487 SCGNSELAETVAQKLFQNNPADN--AFKVMLSNIYAGDGRWDDVKNLRDKMT 536
CG+ + A +V FQ++ + F M++ YA GR + + MT
Sbjct: 614 KCGSLKHAYSV----FQSDARRDLVMFTAMVAG-YAVHGRGKEALMIYSHMT 660
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 240/526 (45%), Gaps = 41/526 (7%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L + LH C+ K + ++ +YA ++ +F +M + +WN ++
Sbjct: 37 LTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG 96
Query: 79 FALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
++S + + F+ M AD KP + TFA V+ C D + +H + +GL
Sbjct: 97 LSVSCGRET-MRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEK 155
Query: 138 DAICCSALVSAYSKLGLVH-EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
D + +ALVS Y+K G + +A F+GIA+ D+V WN++I+G+ + + F M
Sbjct: 156 DTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
Query: 197 RLVGTRPDGYTLAGLLGGIA--DPSLLC-IGQGLHG-LSHKSGLDSDSHVGSLLVSMYSR 252
T P+ T+A +L A D ++ C G+ +H + +S L + V + LVS Y R
Sbjct: 216 LKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR 275
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVAT 311
++ A +F + + DLV+W+ +I+GY+ E K F L+ + DS+ + +
Sbjct: 276 VGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Query: 312 VLASIAQTANVRPGCEIHGYVIRHG-LESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
+L AQ ++ G EIH Y++RH L D V +ALI Y++ G F LM +
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK 395
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
+IIS+N+++ + + +L + + D+ T +LL C + + + +E+
Sbjct: 396 DIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV- 454
Query: 431 QRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGN 490
+ Y VK AG L + EP + ALL CGN
Sbjct: 455 ---------------HGYSVK----AGLLHDE-------EEP---KLGNALLDAYAKCGN 485
Query: 491 SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT 536
E A + L + ++ +LS Y G DD + L +M+
Sbjct: 486 VEYAHKIFLGLSERRTL-VSYNSLLSG-YVNSGSHDDAQMLFTEMS 529
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 179/359 (49%), Gaps = 32/359 (8%)
Query: 89 VSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS----A 144
V FR + G D+ F V++ACA DL R +HG L I CS +
Sbjct: 8 VQNFRLLSG--FGTDHRVFLDVVKACASVSDLTSGRALHGCV----FKLGHIACSEVSKS 61
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG-TRP 203
+++ Y+K + + ++F + D V+WN +++G S + M+ F +M +P
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADEPKP 120
Query: 204 DGYTLAGLLGGIADPSLLCI-------GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK-C 255
T A +L LC+ G+ +H K+GL+ D+ VG+ LVSMY++
Sbjct: 121 SSVTFAIVLP-------LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI 173
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL-- 313
AY F I++ D+V+W+A+I+G+S+ F ++ E + + +A VL
Sbjct: 174 FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPV 233
Query: 314 -ASIAQTANVRPGCEIHGYVI-RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERN 371
AS+ + R G +IH YV+ R L++ V V ++L+ Y + G + +F M ++
Sbjct: 234 CASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKD 293
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKG-LAPDAATFSALLGACCHAGLVNEGREI 429
++S+N VI+G + +AF++F ++ KG ++PD+ T ++L C + G+EI
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 191 QMFSSMRLV-GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
Q + RL+ G D ++ A S L G+ LHG K G + S V +++M
Sbjct: 6 QFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNM 65
Query: 250 YSRCKCMDSAYRVFCSISNPDLVTWSALISGYS-QCGEHEKVLLFFRKL-IMERKKLDSI 307
Y++C+ MD ++F + + D V W+ +++G S CG + + FF+ + + K S+
Sbjct: 66 YAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSV 123
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHF-GICVFRL 366
A VL + + G +H Y+I+ GLE D V +AL+ MY+K GF+ F
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 367 MPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+ +++++S+N++I+G + ++AFR F +L++ P+ AT + +L C
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 239/466 (51%), Gaps = 39/466 (8%)
Query: 123 LRLVHGGAVASGLGLDAICCSALV------SAYSK-LGLVHEANRVFNGIAEPDLVLWNS 175
L+++HG + + L D S L+ S ++K L+ A +F+ I P+L ++N
Sbjct: 28 LKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNL 87
Query: 176 LISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
LI + A ++ M PD T L+ ++ + +G+ H + G
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFR 295
+D +V + LV MY+ C + +A R+F + D+V+W+++++GY +CG E F
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 296 KL-----------------------------IMERKKL--DSILVATVLASIAQTANVRP 324
++ M+R+ + + ++ +V++S A +
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGL 384
G + YV++ + ++ + +AL+DM+ +CG + I VF +PE + +S++S+I GL +
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
HG A +A F +++ G P TF+A+L AC H GLV +G EI++ MK + I+ R E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQN 504
HY +V +LG AG+L EA N + + ILGALL C N+E+AE V L +
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 505 NPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGL-RKMPGLSWIE 549
P + + V+LSNIYA G+WD +++LRD M L +K PG S IE
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 228/523 (43%), Gaps = 83/523 (15%)
Query: 1 MLTQIQWLHSELS--NVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRL-------YAAT 51
+L +++ H +L+ C S K +H LL+THL D F A++L+ L T
Sbjct: 5 VLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPT 64
Query: 52 NDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVI 111
N + AY +F ++ +++++N +IR F+ A + ML + I PDN TF +I
Sbjct: 65 NLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 124
Query: 112 RACA--------DNFDLGMLR------------LVH----------GGAVASGLGL-DAI 140
+A + + ++R LVH G + +G D +
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV 184
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
+++V+ Y K G+V A +F+ + +L W+ +I+GY + ++ + +F M+ G
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
+ + ++ A L G+ + KS + + +G+ LV M+ RC ++ A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
VF + D ++WS++I G + G K + +F ++I + VL++ +
Sbjct: 305 HVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 321 NVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
V G EI+ + + HG+E ++ ++DM + G L
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL---------------------- 402
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
+E F IL+ + P+A ALLGAC + + E+ +R+ + I
Sbjct: 403 -------AEAENF-----ILKMHVKPNAPILGALLGAC----KIYKNTEVAERVGNML-I 445
Query: 440 KARPEH---YVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILG 479
K +PEH YV + + AG+ ++ +L + E + K G
Sbjct: 446 KVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 166/565 (29%), Positives = 277/565 (49%), Gaps = 29/565 (5%)
Query: 4 QIQWLHSELSNVC---KSLLRAKQLHACLLKTH---LSQDPFYATKLVRLYAATNDINSA 57
Q Q ++ L C ++LL LH +L +H SQ+ A L+ +YA +I A
Sbjct: 57 QSQQAYAALFQACAEQRNLLDGINLHHHML-SHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 58 YHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN 117
VFD M R+V W ++I + + LF +ML + P+ +T + V+ +C
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSC--R 172
Query: 118 FDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKL---GLVHEANRVFNGIAEPDLVLWN 174
++ G + VHG A+ GL +A++S Y + +EA VF I +LV WN
Sbjct: 173 YEPG--KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWN 230
Query: 175 SLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ------GLH 228
S+I+ + C + +F M G D TL + + S L + LH
Sbjct: 231 SMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLH 290
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSR-CKCMDSAYRVFCSISN-PDLVTWSALISGYSQCGE 286
L+ KSGL + + V + L+ +YS + Y++F +S+ D+V W+ +I+ ++ +
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYD 349
Query: 287 HEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSA 346
E+ + F +L E+ D ++VL + A R IH VI+ G +D ++++
Sbjct: 350 PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 347 LIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPD 406
LI Y+KCG L + VF M R+++S+NS++ LHG +F ++ + PD
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPD 466
Query: 407 AATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLT 466
+ATF ALL AC HAG V EG IF+ M ++ + HY ++ +L A EA +
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI 526
Query: 467 QSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQ-NNPADNAFKVMLSNIYAGDGRW 525
+ +P D + ALL C GN+ L + A KL + P ++ + +SNIY +G +
Sbjct: 527 KQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSF 586
Query: 526 DDVK-NLRDKMTGGLRKMPGLSWIE 549
++ ++++ T +RK P LSW E
Sbjct: 587 NEANLSIKEMETWRVRKEPDLSWTE 611
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/573 (28%), Positives = 265/573 (46%), Gaps = 66/573 (11%)
Query: 29 LLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNA 88
+ + H D +V Y + + A +FD M RS + ++I+ +A + ++ A
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 89 VSLFRTMLGADIKPDNYTFACVIRACAD---NFDLGML-----RLVHGGAVASGLGLDAI 140
+ LFR M I + T A VI AC+ +D ML +L G V L +
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 141 CC-----------------------SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLI 177
C + +++ YSK GL+ +A +F+ I E D+V W ++I
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
Query: 178 SGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLD 237
G D + ++ M G +P + LL A G LHG K G D
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 238 S-----------------------------DSHVGS--LLVSMYSRCKCMDSAYRVFCSI 266
H+ S L++ + + ++ A VF
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 267 SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPG 325
+ D+ +W+A+ISGY+Q + L FR++I + K D+I + +V ++I+ ++ G
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF---RLMPERNIISYNSVISGL 382
H Y+ + + +++A+IDMY+KCG + + +F + + I +N++I G
Sbjct: 458 KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGS 517
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR 442
HG A A ++ + + P++ TF +L ACCHAGLV G+ F+ MK + I+
Sbjct: 518 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 577
Query: 443 PEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLF 502
+HY MV LLG AG LEEA + + +P D I G LLS + GN E+AE A +L
Sbjct: 578 IKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELA 637
Query: 503 QNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
+P+ KVMLSN+YA GRW+DV +R++M
Sbjct: 638 AIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 670
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 208 LAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
L LG A + + G+ +H KSGLDS+ ++ + +++MY++C+ + A VF +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 268 NPD-------------------------------LVTWSALISGYSQCGEHEKVLLFFRK 296
D V+++ LI GY+Q + + + FR+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 297 LIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGF 356
+ L+ + +ATV+++ + + + I+ LE V VS+ L+ MY C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 357 LHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
L +F MPERN++++N +++G G +A +FD+I EK D ++ ++
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDG 279
Query: 417 CCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAG 457
C ++E + M +P V MV LL ++
Sbjct: 280 CLRKNQLDEALVYYTEM---LRCGMKPSE-VMMVDLLSASA 316
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 37/302 (12%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDIN---------------------------- 55
QLH ++K F ++ YA +NDI
Sbjct: 326 QLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNG 385
Query: 56 ---SAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTML-GADIKPDNYTFACVI 111
A VFD+ + ++ WN+MI +A S A+ LFR M+ + +KPD T V
Sbjct: 386 MVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVF 445
Query: 112 RACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN---GIAEP 168
A + L + H S + + +A++ Y+K G + A +F+ I+
Sbjct: 446 SAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSS 505
Query: 169 DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQG-L 227
+ WN++I G + + ++S ++ + +P+ T G+L L+ +G+
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYF 565
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGE 286
+ G++ D +V + + ++ A + + D++ W L+S G
Sbjct: 566 ESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Query: 287 HE 288
E
Sbjct: 626 VE 627
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 219/438 (50%), Gaps = 33/438 (7%)
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
+VS Y K G++ A VF+ + E D+V WN+++ GY + + R G + +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 205 GYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC 264
++ AGLL L + + HG +G S+ + ++ Y++C M+SA R F
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 265 SISNPDLVTWSALISGYSQCGEHE-------------------------------KVLLF 293
++ D+ W+ LISGY++ G+ E + L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 294 FRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSK 353
FRK+I K + ++ L + A A++R G EIHGY+IR + + V S+LIDMYSK
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 354 CGFLHFGICVFRLMPER-NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSA 412
G L VFR+ ++ + + +N++IS L HG +A RM D +++ + P+ T
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 413 LLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEP 472
+L AC H+GLV EG F+ M + I EHY ++ LLG AG +E + +P
Sbjct: 419 ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
Query: 473 VDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLR 532
DK I A+L C GN EL + A +L + +P +A ++LS+IYA G+W+ V+ LR
Sbjct: 479 PDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLR 538
Query: 533 DKMTG-GLRKMPGLSWIE 549
M + K +SWIE
Sbjct: 539 GVMKKRRVNKEKAVSWIE 556
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 198/476 (41%), Gaps = 78/476 (16%)
Query: 23 KQLHACLLKTHLSQDPFYA-TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
K + AC + + Y+ +V Y + + A VFD M R V WN+M+ +A
Sbjct: 97 KPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ 156
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
A+ ++ + IK + ++FA ++ AC + L + R HG + +G + +
Sbjct: 157 DGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVL 216
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG------------CS------ 183
+++ AY+K G + A R F+ + D+ +W +LISGY C
Sbjct: 217 SCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNP 276
Query: 184 AAW-------------DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL 230
+W + + +F M +G +P+ +T + L A + L G+ +HG
Sbjct: 277 VSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGY 336
Query: 231 SHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF--CSISNPDLVTWSALISGYSQCGEHE 288
++ + ++ V S L+ MYS+ ++++ RVF C D V W+ +IS +Q G
Sbjct: 337 MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD-DKHDCVFWNTMISALAQHGLGH 395
Query: 289 KVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE-IHGYVIRHGLESDVKVSSAL 347
K L +I R + + + +L + + + V G ++HG+ D + + L
Sbjct: 396 KALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACL 455
Query: 348 IDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDA 407
ID+ LG GC E R +I E PD
Sbjct: 456 IDL-------------------------------LGRAGCFKELMR---KIEEMPFEPDK 481
Query: 408 ATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEH---YVYMVKLLGSAGELE 460
++A+LG C ++ E+ ++ DE IK PE Y+ + + G+ E
Sbjct: 482 HIWNAILGVC----RIHGNEELGKKAADEL-IKLDPESSAPYILLSSIYADHGKWE 532
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 166/632 (26%), Positives = 283/632 (44%), Gaps = 107/632 (16%)
Query: 25 LHACLLKTHL-SQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
+H L+K L + D + + Y + A +FD+M R WN ++ S
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
++ AV LFR M + K + T +++ C++ R +HG + GL + C+
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 144 ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
+L+ YS+ G + + +VFN + + +L WNS++S Y D + + M + G +P
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 204 D---------GY--------------------------TLAGLLGGIADPSLLCIGQGLH 228
D GY +++ LL +A+P L +G+ +H
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF---------------------CSIS 267
G ++ L D +V + L+ MY + + A VF C +
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 268 N--------------PDLVTWSALISGYSQCGEHEKVL--------------------LF 293
+ PD +TW++L SGY+ G+ EK L +F
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 294 ---------------FRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
F K+ E ++ ++T+L + + + G E+HG+ +R L
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRI 398
D V++AL+DMY K G L I +F + +++ S+N ++ G + G E F +
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 399 LEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGE 458
LE G+ PDA TF+++L C ++GLV EG + F M+ + I EH MV LLG +G
Sbjct: 489 LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGY 548
Query: 459 LEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNI 518
L+EA++ Q++ D I GA LS C + ELAE ++L P ++A +M+ N+
Sbjct: 549 LDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINL 608
Query: 519 YAGDGRWDDVKNLRDKMTGGLRKMPGL-SWIE 549
Y+ RW+DV+ +R+ M ++ L SWI+
Sbjct: 609 YSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQ 640
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 40/341 (11%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
K +H +L+ L D + T L+ +Y T + A VFD M +++ WNS++ +
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC 141
+ +A +L M IKP DAI
Sbjct: 304 ACLLKDAEALMIRMEKEGIKP-----------------------------------DAIT 328
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
++L S Y+ LG +A V + E P++V W ++ SG + + +++F M+
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G P+ T++ LL + SLL G+ +HG + L D++V + LV MY + +
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
SA +F I N L +W+ ++ GY+ G E+ + F ++ + D+I +VL+
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 318 QTANVRPGCEIHGYV-IRHGLESDVKVSSALIDMYSKCGFL 357
+ V+ G + + R+G+ ++ S ++D+ + G+L
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 16 CKSLLRA-KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
C SLL + K++H L+ +L D + AT LV +Y + D+ SA +F + +S+ WN
Sbjct: 408 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC 467
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN---------FDLGMLRL 125
M+ +A+ R + ++ F ML A ++PD TF V+ C ++ FDL R
Sbjct: 468 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRY 527
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSA 184
G+ CS +V + G + EA ++ +PD +W + +S C
Sbjct: 528 --------GIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLS--SCKI 577
Query: 185 AWDVGMQMFSSMRLVGTRP 203
D+ + + RL P
Sbjct: 578 HRDLELAEIAWKRLQVLEP 596
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 154/582 (26%), Positives = 266/582 (45%), Gaps = 76/582 (13%)
Query: 44 LVRL------YAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLG 97
LVRL A + I SA VFD M WN+M+ +++ A++LF +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 98 ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE 157
+D KPD+Y+F ++ CA ++ R + + SG ++L+ Y K
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 158 ANRVFNGI------------------------AEPDLVL---------WNSLISGYGCSA 184
AN+VF + A D+ + WN +ISG+
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGI-ADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ + +F M +PD YT + L+ AD S + G+ +H + K+G S
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 244 SLLVSMYSRCKCMDSAYRVFCSIS-------------------------------NPDLV 272
+ ++S Y++ D A R SI ++V
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 273 TWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYV 332
TW+ +I+GY + G+ E+ L FF +++ D VL + + A + G IHG +
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 333 IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAF 392
I G + V +AL+++Y+KCG + F + ++++S+N+++ G+HG A +A
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQAL 423
Query: 393 RMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKL 452
+++D ++ G+ PD TF LL C H+GLV EG IF+ M ++ I +H M+ +
Sbjct: 424 KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDM 483
Query: 453 LGSAGELEEAYNLTQS----LPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPAD 508
G G L EA +L + + + + + LL C++ ++EL V++ L P++
Sbjct: 484 FGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSE 543
Query: 509 NAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
V+LSN+Y GRW + +++R +M G++K PG SWIE
Sbjct: 544 EMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIE 585
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L K +H CL+ + LV LYA DI A F ++ + + WN+M+ A
Sbjct: 353 LGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFA 412
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA 115
F + D A+ L+ M+ + IKPDN TF ++ C+
Sbjct: 413 FGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCS 449
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 238/468 (50%), Gaps = 37/468 (7%)
Query: 119 DLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLIS 178
+L L+ H + +GL D + + + A S G + A VF P+ L N++I
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 179 GYGC---SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
A + + ++ + + +PD +T +L S + G+ +HG G
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKV----- 290
DS HV + L+ MY C + A ++F + D+ W+AL++GY + GE ++
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 291 ----------------------------LLFFRKLIMERKKLDSILVATVLASIAQTANV 322
+ F++++ME + D + + VL++ A ++
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G I YV G+ V +++A+IDMY+K G + + VF + ERN++++ ++I+GL
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKAR 442
HG +EA MF+R+++ G+ P+ TF A+L AC H G V+ G+ +F M+ ++ I
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 443 PEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLF 502
EHY M+ LLG AG+L EA + +S+P + AI G+LL+ N + EL E +L
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELI 446
Query: 503 QNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ P ++ ++L+N+Y+ GRWD+ + +R+ M G G++KM G S IE
Sbjct: 447 KLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 494
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 197/469 (42%), Gaps = 41/469 (8%)
Query: 5 IQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM 64
+ W + L +L KQ H ++ T L++D K + + + AY VF
Sbjct: 14 LNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQ 73
Query: 65 STRSVYLWNSMIRAFALSQRFDN---AVSLFRTMLGADIKPDNYTFACVIRACADNFDLG 121
+ YL N+MIRA +L + A++++R + KPD +TF V++ D+
Sbjct: 74 PCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVW 133
Query: 122 MLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG 181
R +HG V G + L+ Y G + +A ++F+ + D+ +WN+L++GYG
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 182 CSAAWD---------------------------------VGMQMFSSMRLVGTRPDGYTL 208
D +++F M + PD TL
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 209 AGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN 268
+L AD L +G+ + G++ + + ++ MY++ + A VF ++
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE 313
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI 328
++VTW+ +I+G + G + L F +++ + + + +L++ + V G +
Sbjct: 314 RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Query: 329 HGYV-IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHG 386
+ ++G+ +++ +ID+ + G L V + MP + N + S+++ +H
Sbjct: 374 FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHH 433
Query: 387 CASEAFRMFDRILEKGLAP-DAATFSALLGACCHAGLVNEGREIFQRMK 434
R +++ L P ++ + L + G +E R + MK
Sbjct: 434 DLELGERALSELIK--LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMK 480
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 225/482 (46%), Gaps = 45/482 (9%)
Query: 108 ACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE--ANRVFNGI 165
+ +I D +L ++ +HG + GL + L+ +KLG+ + A RV +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
+ LW ++I GY +D + M+ MR P +T + LL L +G+
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
H + + +VG+ ++ MY +C+ +D A +VF + D+++W+ LI+ Y++ G
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD----- 340
E F L + D + ++ AQ A + E + + G+ +D
Sbjct: 230 NMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 341 --------------------------------VKVSSALIDMYSKCGFLHFGICVFRLMP 368
V + SALIDMYSKCG + + VF M
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRIL-EKGLAPDAATFSALLGACCHAGLVNEGR 427
+N+ +Y+S+I GL HG A EA +F ++ + + P+ TF L AC H+GLV++GR
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 428 EIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNS 487
++F M F ++ +HY MV LLG G L+EA L +++ + GALL C
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 488 CGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLS 546
N E+AE A+ LF+ P ++LSN+YA G W V +R + GL+K P +S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 547 WI 548
W+
Sbjct: 526 WV 527
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 189/438 (43%), Gaps = 69/438 (15%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAY--HVFDKMSTRSVYLWN 73
C +L + KQ+H +L+ L Q + TKL+R Y V + + R+ +LW
Sbjct: 59 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 74 SMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA--- 130
++IR +A+ +FD A++++ M +I P ++TF+ +++AC DL + R H
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 131 -----VASGLGL-----------------------DAICCSALVSAYSKLGLVHEANRVF 162
V G + D I + L++AY+++G + A +F
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC 222
+ D+V W ++++G+ +A ++ F M G R D T+AG + A
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 223 IGQGLHGLSHKSGLDSDSHV--GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
++ KSG HV GS L+ MYS+C ++ A VF S++N ++ T+S++I G
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 281 YSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
+ G ++ L F ++ + + K +++ L + + + V G ++
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFD--------- 409
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
MY F + P R+ Y ++ LG G EA + I
Sbjct: 410 ---------SMYQ----------TFGVQPTRD--HYTCMVDLLGRTGRLQEALEL---IK 445
Query: 400 EKGLAPDAATFSALLGAC 417
+ P + ALLGAC
Sbjct: 446 TMSVEPHGGVWGALLGAC 463
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 20/244 (8%)
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL--HFGICV 363
+LV+++++ + N+ +IHG+V+R GL+ + + LI +K G + V
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 364 FRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
+ RN + +VI G + G EA M+ + ++ + P + TFSALL AC +
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 424 NEGREIFQRMKDEFNIKARPEHYVY----MVKLLGSAGELEEAYNLTQSLPEPVDKAILG 479
N GR+ + + R +VY M+ + ++ A + +PE D
Sbjct: 166 NLGRQFHAQ-----TFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER-DVISWT 219
Query: 480 ALLSCCNSCGNSELAETVAQKLFQNNPADN--AFKVMLSNIYAGDGRWDDVKNLRDKM-T 536
L++ GN E A +LF++ P + A+ M++ +A + + + D+M
Sbjct: 220 ELIAAYARVGNME----CAAELFESLPTKDMVAWTAMVTG-FAQNAKPQEALEYFDRMEK 274
Query: 537 GGLR 540
G+R
Sbjct: 275 SGIR 278
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 222/426 (52%), Gaps = 34/426 (7%)
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT--RPDGYTLAGLLGGI 215
AN++ + +P L NS+I + S + + + G +PD YT+ L+
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 216 ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLV--- 272
+ G +HG++ + G D+D HV + L+S+Y+ C+DS ++VF SI PD V
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 273 ----------------------------TWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
W+A+ISGY+Q GE + L F + +E K+
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
+ + + +VL++ Q + G H Y+ R+ ++ V++++ L+D+Y+KCG + + VF
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
M E+N+ +++S ++GL ++G + +F + + G+ P+A TF ++L C G V+
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSC 484
EG+ F M++EF I+ + EHY +V L AG LE+A ++ Q +P A+ +LL
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 485 CNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMP 543
N EL ++K+ + A++ V+LSNIYA WD+V ++R M + G+RK P
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 544 GLSWIE 549
G S +E
Sbjct: 479 GCSVME 484
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 171/403 (42%), Gaps = 68/403 (16%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATND--INSAYHVFDKMSTRSVYLWNSM 75
+ +Q+HA L +D V+ A ++ ++ A + D+ +++ NSM
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 76 IRAFALSQRFDNAVSLFRTML--GADIKPDNYTFACVIRACADNFDLGMLRL------VH 127
IRA S + + +R +L G D+KPDNYT +++AC LR+ VH
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG------LRMRETGLQVH 131
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLV---------------- 171
G + G D + L+S Y++LG + ++VFN I PD V
Sbjct: 132 GMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 172 ---------------LWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA 216
WN++ISGY + +F M+L G + +G + +L
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACT 251
Query: 217 DPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSA 276
L G+ H ++ + + + LV +Y++C M+ A VF + ++ TWS+
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 277 LISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYV---I 333
++G + G EK L F + + +++ +VL GC + G+V
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR----------GCSVVGFVDEGQ 361
Query: 334 RH--------GLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
RH G+E ++ L+D+Y++ G L + + + MP
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP 404
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 114/288 (39%), Gaps = 33/288 (11%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDK-------------------- 63
Q+H ++ DP T L+ LYA ++S + VF+
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCG 188
Query: 64 -----------MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIR 112
M R WN+MI +A A+++F M +K + V+
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 113 ACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVL 172
AC L R H + + + + LV Y+K G + +A VF G+ E ++
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 173 WNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ-GLHGLS 231
W+S ++G + + +++FS M+ G P+ T +L G + + GQ +
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 232 HKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALI 278
++ G++ LV +Y+R ++ A + + P WS+L+
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 239/457 (52%), Gaps = 24/457 (5%)
Query: 103 DNYTFACVIRACADNFDLGMLRLVHGGAVA------SGLGLDAICCSALVSAYSKLGLVH 156
D+ T++ +I+ C N R VH G + +G + L++ Y K L++
Sbjct: 60 DSATYSELIKCCISN------RAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLN 113
Query: 157 EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL---G 213
+A+++F+ + + +++ W ++IS Y +++ M RP+ YT + +L
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173
Query: 214 GIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVT 273
G++D +L G K GL+SD V S L+ ++++ + A VF + D +
Sbjct: 174 GMSDVRMLHCG------IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
W+++I G++Q + L F+++ + + +VL + A + G + H +++
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFR 393
++ + D+ +++AL+DMY KCG L + VF M ER++I+++++ISGL +G + EA +
Sbjct: 288 KY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLL 453
+F+R+ G P+ T +L AC HAGL+ +G F+ MK + I EHY M+ LL
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 454 GSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKV 513
G AG+L++A L + D LL C N LAE A+K+ +P D
Sbjct: 406 GKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYT 465
Query: 514 MLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+LSNIYA +WD V+ +R +M G++K PG SWIE
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE 502
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 200/412 (48%), Gaps = 19/412 (4%)
Query: 39 FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
F L+ +Y N +N A+ +FD+M R+V W +MI A++ + A+ L ML
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 99 DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEA 158
+++P+ YT++ V+R+C D +R++H G + GL D SAL+ ++KLG +A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSD---VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 159 NRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADP 218
VF+ + D ++WNS+I G+ ++ DV +++F M+ G + TL +L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 219 SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALI 278
+LL +G H H D D + + LV MY +C ++ A RVF + D++TWS +I
Sbjct: 274 ALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 279 SGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR---- 334
SG +Q G ++ L F ++ K + I + VL + + + G Y R
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKK 387
Query: 335 -HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEAF 392
+G++ + +ID+ K G L + + M E + +++ +++ + A
Sbjct: 388 LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE 447
Query: 393 RMFDRILEKGLAP-DAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
+++ L P DA T++ L ++ + EI RM+D IK P
Sbjct: 448 YAAKKVI--ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDR-GIKKEP 496
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 8/276 (2%)
Query: 7 WLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMST 66
+ +S + C + + LH ++K L D F + L+ ++A + A VFD+M T
Sbjct: 163 YTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 67 RSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD--NFDLGMLR 124
+WNS+I FA + R D A+ LF+ M A + T V+RAC +LGM
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 125 LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA 184
VH D I +ALV Y K G + +A RVFN + E D++ W+++ISG +
Sbjct: 283 HVH----IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVG 243
+++F M+ GT+P+ T+ G+L + LL G + G+D
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 244 SLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALI 278
++ + + +D A ++ + PD VTW L+
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 218/407 (53%), Gaps = 2/407 (0%)
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
L++ Y + G + A +VF+ + + L WN++I+G + G+ +F M +G PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 205 GYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC 264
YTL + G A + IGQ +HG + K GL+ D V S L MY R + V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 265 SISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRP 324
S+ +LV W+ LI G +Q G E VL ++ + + + + I TVL+S + A
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGL 384
G +IH I+ G S V V S+LI MYSKCG L F + + + ++S+IS G
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 385 HGCASEAFRMFDRILEK-GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
HG EA +F+ + E+ + + F LL AC H+GL ++G E+F M +++ K
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 444 EHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQ 503
+HY +V LLG AG L++A + +S+P D I LLS CN N+E+A+ V +++ Q
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 504 NNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+P D+A V+L+N++A RW DV +R M ++K G+SW E
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 7/401 (1%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
L+ Y D+ +A VFD+M R + WN+MI + + +SLFR M G PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
YT V A + + + +HG + GL LD + S+L Y + G + + V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
+ +LV WN+LI G + + + ++ M++ G RP+ T +L +D ++
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQ 283
GQ +H + K G S V S L+SMYS+C C+ A + F + D V WS++IS Y
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 284 CGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVI-RHGLESDV 341
G+ ++ + F + + +++ + +L + + + G E+ ++ ++G + +
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
K + ++D+ + G L + R MP + +I+ + +++S +H A A R+F IL+
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 401 KGLAP-DAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
+ P D+A + L A + E+ + M+D+ N+K
Sbjct: 391 --IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDK-NVK 428
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 102/186 (54%)
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
++L++ Y R + +A +VF + + L TW+A+I+G Q +E+ L FR++
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D + +V + A +V G +IHGY I++GLE D+ V+S+L MY + G L G V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 364 FRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
R MP RN++++N++I G +GC ++ + G P+ TF +L +C +
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 424 NEGREI 429
+G++I
Sbjct: 209 GQGQQI 214
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 19/318 (5%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+S+ +Q+H +K L D + L +Y + V M R++ WN++I
Sbjct: 105 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
A + + + L++ M + +P+ TF V+ +C+D G + +H A+ G
Sbjct: 165 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
S+L+S YSK G + +A + F+ + D V+W+S+IS YG D +++F++M
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 197 -RLVGTRPDGYTLAGLL-----GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+ LL G+ D L + K GL + V LL
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLL---- 340
Query: 251 SRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFR--KLIMERKKLDS- 306
R C+D A + S+ D+V W L+S C H+ + R K I++ DS
Sbjct: 341 GRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA---CNIHKNAEMAQRVFKEILQIDPNDSA 397
Query: 307 --ILVATVLASIAQTANV 322
+L+A V AS + +V
Sbjct: 398 CYVLLANVHASAKRWRDV 415
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 249/515 (48%), Gaps = 33/515 (6%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+QLH ++K S + T +V +Y ++ A VFD++ S WN ++R +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
D AV +F ML +++P N+T + V+ AC+ + L + +++H AV + D +
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 143 SAL-------------------------------VSAYSKLGLVHEANRVFNGIAEPDLV 171
+++ +S Y+ GL EA +F+ + E ++V
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 172 LWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS 231
WN+++ GY + WD + + MR D TL +L + S + +G+ HG
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 232 HKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN-PDLVTWSALISGYSQCGEHEKV 290
++ G D++ V + L+ MY +C + SA F +S D V+W+AL++G ++ G E+
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 291 LLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDM 350
L FF + +E K L AT+LA A + G IHG++IR G + DV + A++DM
Sbjct: 482 LSFFEGMQVEAKPSKYTL-ATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 351 YSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATF 410
YSKC + I VF+ R++I +NS+I G +G + E F +F + +G+ PD TF
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTF 600
Query: 411 SALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLP 470
+L AC G V G + F M +++I + EHY M++L G L + +P
Sbjct: 601 LGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Query: 471 EPVDKAILGALLSCCNSCGNSELAETVAQKLFQNN 505
+L + C S+L A++L ++
Sbjct: 661 FDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDH 695
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 221/458 (48%), Gaps = 36/458 (7%)
Query: 7 WLHSELSNVCKS---LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDK 63
WL+ L C S +++A+++ + L+ F + + Y ++ A +F++
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 64 MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML 123
M R WN++I A A + D +FR M ++ +FA V+++C DL +L
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
R +H V G + +++V Y K ++ +A RVF+ I P V WN ++ Y
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
D + MF M + RP +T++ ++ + L +G+ +H ++ K + +D+ V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG------------------ 285
+ + MY +C ++SA RVF + DL +W++ +SGY+ G
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 286 -------------EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYV 332
E ++ L F + E + +D++ + +L + ++V+ G + HG++
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 333 IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE-RNIISYNSVISGLGLHGCASEA 391
RHG +++V V++AL+DMY KCG L FR M E R+ +S+N++++G+ G + +A
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 392 FRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
F+ ++ P T + LL C + +N G+ I
Sbjct: 482 LSFFEG-MQVEAKPSKYTLATLLAGCANIPALNLGKAI 518
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 168/355 (47%), Gaps = 13/355 (3%)
Query: 89 VSLFRTMLGADIKPDNY-TFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVS 147
VS ++L A +P +Y + + R+C+ + R V V + +
Sbjct: 45 VSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIE 104
Query: 148 AYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYT 207
AY K G V +A +F + E D WN++I+ + D +MF M G R +
Sbjct: 105 AYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETS 164
Query: 208 LAGLL---GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC 264
AG+L G I D LL + LH K G + + + +V +Y +C+ M A RVF
Sbjct: 165 FAGVLKSCGLILDLRLL---RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 265 SISNPDLVTWSALISGYSQCG-EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVR 323
I NP V+W+ ++ Y + G E V++FF+ L + + L+ V++V+ + +++ +
Sbjct: 222 EIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT-VSSVMLACSRSLALE 280
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
G IH ++ + +D VS+++ DMY KC L VF +++ S+ S +SG
Sbjct: 281 VGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYA 340
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFN 438
+ G EA +FD + E+ + +++A+LG HA +E + M+ E
Sbjct: 341 MSGLTREARELFDLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLMRQEIE 391
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 22/256 (8%)
Query: 14 NVCKSL---LRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMST-RSV 69
NVC + KQ H + + + A L+ +Y + SA F +MS R
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 70 YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
WN+++ A R + A+S F M + KP YT A ++ CA+ L + + +HG
Sbjct: 463 VSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGF 521
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVG 189
+ G +D + A+V YSK A VF A DL+LWNS+I G +
Sbjct: 522 LIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEV 581
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLH---GLSHKSGLDSDSHVG--- 243
++F + G +PD T G+L CI +G H G + S + + H+
Sbjct: 582 FELFMLLENEGVKPDHVTFLGILQA-------CIREG-HVELGFQYFSSMSTKYHISPQV 633
Query: 244 ---SLLVSMYSRCKCM 256
++ +Y + C+
Sbjct: 634 EHYDCMIELYCKYGCL 649
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 238/477 (49%), Gaps = 41/477 (8%)
Query: 111 IRACADNFDLGMLRLVHGGAVASGLGLDAICC---SALVSAYSKLGLVHEANRVFNGIAE 167
++ CA N L + +H V G+ CC + LV+ Y K G A +VF+ +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGI---VQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 168 PDLVLWNSLISGYG-CSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQG 226
D + W S+++ + + S G RPD + + L+ A+ + G+
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 227 LHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGE 286
+H S +D V S LV MY++C ++SA VF SI + ++W+A++SGY++ G
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 287 HEKVLLFFRKLI-----------------------------MERKK---LDSILVATVLA 314
E+ L FR L M R++ LD +++++++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
+ A A G ++HG VI G +S V +S+ALIDMY+KC + +F M R+++S
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+ S+I G+ HG A +A ++D ++ G+ P+ TF L+ AC H G V +GRE+FQ M
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 435 DEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELA 494
++ I+ +HY ++ LLG +G L+EA NL ++P P D+ ALLS C G ++
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 495 ETVAQKLFQN-NPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+A L + D + ++LSNIYA W V R K+ +RK PG S +E
Sbjct: 427 IRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 208/483 (43%), Gaps = 72/483 (14%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
++L AK LHA ++K + Q A LV +Y + A VFD+M R W S++
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 76
Query: 77 RAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
A + +S+F ++ + ++PD++ F+ +++ACA+ + R VH + S
Sbjct: 77 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM--- 192
D + S+LV Y+K GL++ A VF+ I + + W +++SGY S + +++
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 193 ----------------------------FSSMRLVGTRP-DGYTLAGLLGGIADPSLLCI 223
F+ MR D L+ ++G A+ +
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQ 283
G+ +HGL G DS + + L+ MY++C + +A +F + + D+V+W++LI G +Q
Sbjct: 257 GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQ 316
Query: 284 CGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR-HGLESDVK 342
G+ EK L + ++ K + + ++ + + V G E+ + + +G+ ++
Sbjct: 317 HGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQ 376
Query: 343 VSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
+ L+D+ + G L + MP
Sbjct: 377 HYTCLLDLLGRSGLLDEAENLIHTMP---------------------------------- 402
Query: 403 LAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSA---GEL 459
PD T++ALL AC G G I + F +K P Y+ + + SA G++
Sbjct: 403 FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK-DPSTYILLSNIYASASLWGKV 461
Query: 460 EEA 462
EA
Sbjct: 462 SEA 464
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 233/452 (51%), Gaps = 8/452 (1%)
Query: 106 TFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI 165
T A ++ +++ + L+H + G D + LV +Y KL ++ A ++F+ +
Sbjct: 31 TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEM 90
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL-VGTRPDGYTLAGLLGGIADPSLLCIG 224
EP++V W S+ISGY + MF M P+ YT A + + + IG
Sbjct: 91 CEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIG 150
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI--SNPDLVTWSALISGYS 282
+ +H SGL + V S LV MY +C +++A RVF S+ ++V+W+++I+ Y+
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 283 QCGEHEKVLLFFRKL--IMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
Q + + FR + + + ++A+V+++ + ++ G HG V R G ES+
Sbjct: 211 QNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESN 270
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
V+++L+DMY+KCG L +F + ++ISY S+I HG A ++FD ++
Sbjct: 271 TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA 330
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
+ P+ T +L AC H+GLVNEG E M +++ + HY +V +LG G ++
Sbjct: 331 GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVD 390
Query: 461 EAYNLTQSLPEPVDKAIL--GALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNI 518
EAY L +++ ++ L GALLS G E+ +++L Q+N + + LSN
Sbjct: 391 EAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNA 450
Query: 519 YAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
YA G W+D ++LR +M G K SWIE
Sbjct: 451 YAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 201/427 (47%), Gaps = 10/427 (2%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
LH LK + D F LV Y +IN+A +FD+M +V W S+I + +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 85 FDNAVSLFRTM-LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
NA+S+F+ M + P+ YTFA V +AC+ + + + +H SGL + + S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 144 ALVSAYSKLGLVHEANRVFNGIA--EPDLVLWNSLISGYGCSAAWDVGMQMFSSMR--LV 199
+LV Y K V A RVF+ + ++V W S+I+ Y +A +++F S L
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
R + + LA ++ + L G+ HGL + G +S++ V + L+ MY++C + A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
++F I +++++++I ++ G E + F +++ R + + + VL + + +
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 320 ANVRPGCEIHGYVI-RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP---ERNIISY 375
V G E + ++G+ D + + ++DM + G + + + + E+ + +
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
+++S LHG R+++ +A + AL A +G + + MK
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSA-YIALSNAYAVSGGWEDSESLRLEMKR 469
Query: 436 EFNIKAR 442
N+K R
Sbjct: 470 SGNVKER 476
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 12/298 (4%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM--STRSVYLWNSMIRAFA 80
K +HA L + L ++ ++ LV +Y ND+ +A VFD M R+V W SMI A+A
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 81 LSQRFDNAVSLFRTMLGA--DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
+ R A+ LFR+ A + + + A VI AC+ L ++ HG G +
Sbjct: 211 QNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESN 270
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ ++L+ Y+K G + A ++F I ++ + S+I + +++F M
Sbjct: 271 TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA 330
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS---HKSGLDSDSHVGSLLVSMYSRCKC 255
P+ TL G+L + L + +GL LS K G+ DS + +V M R
Sbjct: 331 GRINPNYVTLLGVLHACSHSGL--VNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGR 388
Query: 256 MDSAYRVFCSI---SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
+D AY + +I + + W AL+S G E V ++LI +++ S +A
Sbjct: 389 VDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIA 446
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 13/184 (7%)
Query: 6 QWLHSELSNVCKSLLR---AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFD 62
Q++ + + + C SL R K H + + + AT L+ +YA ++ A +F
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 295
Query: 63 KMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD----NF 118
++ SV + SMI A A + AV LF M+ I P+ T V+ AC+ N
Sbjct: 296 RIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNE 355
Query: 119 DLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI---AEPDLVLWNS 175
L L L+ A G+ D+ + +V + G V EA + I AE +LW +
Sbjct: 356 GLEYLSLM---AEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGA 412
Query: 176 LISG 179
L+S
Sbjct: 413 LLSA 416
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 264/547 (48%), Gaps = 8/547 (1%)
Query: 10 SELSNVC--KSLLR-AKQLHACLLKTHLS---QDPFYATKLVRLYAATNDINSAYHVFDK 63
+EL VC S LR + +HA L+ T+ S +D + L+ LY + A +FD
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 64 MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTML-GADIKPDNYTFACVIRACADNFDLGM 122
M R+V W +M++ + S + LF++M + +P+ + V ++C+++ +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGC 182
+ HG + GL + LV YS EA RV + + DL +++S +SGY
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
A+ G+ + + T L ++ L + +H + G +++
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEA 274
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
L++MY +C + A RVF ++ + ++ Y Q E+ L F K+ +
Sbjct: 275 CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
+ A +L SIA+ + ++ G +HG V++ G + V V +AL++MY+K G +
Sbjct: 335 PPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARK 394
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
F M R+I+++N++ISG HG EA FDR++ G P+ TF +L AC H G
Sbjct: 395 AFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGF 454
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL 482
V +G F ++ +F+++ +HY +V LL AG ++A + ++ P D LL
Sbjct: 455 VEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Query: 483 SCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRK 541
+ C N L + VA+ + P D+ V+LSNI+A W+ V +R M G++K
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKK 574
Query: 542 MPGLSWI 548
PG+SWI
Sbjct: 575 EPGVSWI 581
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 268/499 (53%), Gaps = 15/499 (3%)
Query: 57 AYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD 116
A H+FD++ R + NS + + S ++ ++LF + A ++TF V+ AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 117 NFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSL 176
R VH + G I +AL+ YSK G + ++ RVF + E DLV WN+L
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 177 ISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGL 236
+SG+ + + +F++M +TL+ ++ A +L G+ +H + +G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 237 DSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFR 295
D +G+ ++S YS ++ A +V+ S++ + D V ++LISG + +++ L
Sbjct: 217 DLVV-LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFL--- 272
Query: 296 KLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
+M R++ + ++++ LA + +++ G +IH +R+G SD K+ + L+DMY KCG
Sbjct: 273 --LMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 356 FLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG--LAPDAATFSAL 413
+ +FR +P ++++S+ S+I ++G +A +F + E+G + P++ TF +
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 414 LGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPV 473
+ AC HAGLV EG+E F MK+++ + EHYV + +L AGE EE + L + + E
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND 450
Query: 474 DK----AILGALLSCCNSCGNSELAETVAQKLFQNNPADNA-FKVMLSNIYAGDGRWDDV 528
++ AI A+LS C+ + E VA++L + +NA V++SN YA G+WD V
Sbjct: 451 NQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVV 510
Query: 529 KNLRDKMTG-GLRKMPGLS 546
+ LR K+ GL K G S
Sbjct: 511 EELRGKLKNKGLVKTAGHS 529
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 194/418 (46%), Gaps = 40/418 (9%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q+HA ++K T L+ +Y+ + + VF+ + + + WN+++ F +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ A+ +F M ++ +T + V++ CA L + VH V +G L +
Sbjct: 164 GKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLG 222
Query: 143 SALVSAYSKLGLVHEANRVFNGI-AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+A++S YS +GL++EA +V+N + D V+ NSLISG + + + S
Sbjct: 223 TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ----- 277
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
RP+ L+ L G +D S L IG+ +H ++ ++G SDS + + L+ MY +C + A
Sbjct: 278 RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQART 337
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL--DSILVATVLASIAQT 319
+F +I + +V+W+++I Y+ G+ K L FR++ E + +S+ V+++ A
Sbjct: 338 IFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHA 397
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
V+ G E G M K +RL+P Y I
Sbjct: 398 GLVKEGKECFGM------------------MKEK----------YRLVPGTE--HYVCFI 427
Query: 380 SGLGLHGCASEAFRMFDRILEK-GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
L G E +R+ +R++E + A + A+L AC + G + +R+ +E
Sbjct: 428 DILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEE 485
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 229/459 (49%), Gaps = 33/459 (7%)
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
+ ++ + GL + + +V K+ + A R+FN ++ P++ L+NS+I Y +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 184 AAWDVGMQMFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ + ++++ + R PD +T + A +G+ +HG K G
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKV------------ 290
+ L+ MY + + A++VF + D+++W++L+SGY++ G+ +K
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 291 -------------------LLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGY 331
+ FFR++ + + D I + +VL S AQ ++ G IH Y
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 332 VIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEA 391
R G V +ALI+MYSKCG + I +F M +++IS++++ISG HG A A
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 392 FRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVK 451
F+ + + P+ TF LL AC H G+ EG F M+ ++ I+ + EHY ++
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 452 LLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAF 511
+L AG+LE A +T+++P D I G+LLS C + GN ++A L + P D
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 512 KVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
V+L+NIYA G+W+DV LR + ++K PG S IE
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 217/488 (44%), Gaps = 50/488 (10%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KS K+++A ++ LSQ F TK+V D++ A +F+++S +V+L+NS+I
Sbjct: 21 KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 77 RAFALSQRFDNAVSLFRTMLGADIK-PDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
RA+ + + + + +++ +L + PD +TF + ++CA + + VHG G
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGP 140
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG-------------- 181
+ +AL+ Y K + +A++VF+ + E D++ WNSL+SGY
Sbjct: 141 RFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHL 200
Query: 182 ----CSAAWDV-------------GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
+W M F M+L G PD +L +L A L +G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQC 284
+ +H + + G + V + L+ MYS+C + A ++F + D+++WS +ISGY+
Sbjct: 261 KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH 320
Query: 285 GEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR-HGLESDVKV 343
G + F ++ + K + I +L++ + + G + + + +E ++
Sbjct: 321 GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEH 380
Query: 344 SSALIDMYSKCGFLHFGICVFRLMPER-NIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
LID+ ++ G L + + + MP + + + S++S G A D ++E
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE-- 438
Query: 403 LAP-DAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEE 461
L P D + L G + + + +++E N+K P G L E
Sbjct: 439 LEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNE-NMKKTP------------GGSLIE 485
Query: 462 AYNLTQSL 469
N+ Q
Sbjct: 486 VNNIVQEF 493
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 222/445 (49%), Gaps = 3/445 (0%)
Query: 108 ACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE 167
+ +I A + + RL+H V S LV Y +LG A ++F+ + E
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRL--VGTRPDGYTLAGLLGGIADPSLLCIGQ 225
DLV WNSLISGY ++ S M + VG RP+ T ++ G+
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
+HGL K G+ + V + ++ Y + + S+ ++F +S +LV+W+ +I + Q G
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
EK L +F + D VL S VR IHG ++ G + +++
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 346 ALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP 405
AL+D+YSK G L VF + + +++ ++++ HG +A + F+ ++ G++P
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 406 DAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNL 465
D TF+ LL AC H+GLV EG+ F+ M + I R +HY MV LLG +G L++AY L
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 466 TQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRW 525
+ +P + GALL C +++L A++LF+ P D VMLSNIY+ G W
Sbjct: 395 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLW 454
Query: 526 DDVKNLRDKM-TGGLRKMPGLSWIE 549
D +R+ M GL + G S+IE
Sbjct: 455 KDASRIRNLMKQKGLVRASGCSYIE 479
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 208/488 (42%), Gaps = 58/488 (11%)
Query: 1 MLTQIQWLHSELSNV---------CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAAT 51
L+Q ++HS +NV C S+ + LH ++K+ + F +LV Y
Sbjct: 20 FLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRL 79
Query: 52 NDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADI--KPDNYTFAC 109
A +FD+M R + WNS+I ++ + M+ +++ +P+ TF
Sbjct: 80 GHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLS 139
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPD 169
+I AC R +HG + G+ + +A ++ Y K G + + ++F ++ +
Sbjct: 140 MISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKN 199
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
LV WN++I + + + G+ F+ R VG PD T +L D ++ + QG+HG
Sbjct: 200 LVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHG 259
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEK 289
L G + + + L+ +YS+ ++ + VF I++PD + W+A+++ Y+ G
Sbjct: 260 LIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRD 319
Query: 290 VLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALID 349
+ F ++ +G+ D + L++
Sbjct: 320 AIKHFE-----------------------------------LMVHYGISPDHVTFTHLLN 344
Query: 350 MYSKCGFLHFGICVFRLMPERNIIS-----YNSVISGLGLHGCASEAFRMFDRILEKGLA 404
S G + G F M +R I Y+ ++ LG G +A+ + I E +
Sbjct: 345 ACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL---IKEMPME 401
Query: 405 PDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP-EHYVYMVKLLGSAGELEEAY 463
P + + ALLGAC G + +R+ F ++ R +YV + + ++G ++A
Sbjct: 402 PSSGVWGALLGACRVYKDTQLGTKAAERL---FELEPRDGRNYVMLSNIYSASGLWKDAS 458
Query: 464 NLTQSLPE 471
+ + +
Sbjct: 459 RIRNLMKQ 466
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 211/397 (53%), Gaps = 9/397 (2%)
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPD--LVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
S LV Y+ G A+ VF+ +++ D WNSLISGY ++ M ++ M G
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
+PD +T +L + IG+ +H K G D +V + LV MY++C + A
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
VF I + D V+W+++++GY G + L FR ++ + D + +++VLA +
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL--- 307
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
+ + G ++HG+VIR G+E ++ V++ALI +YSK G L +F M ER+ +S+N++IS
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
H S + F+++ PD TF ++L C + G+V +G +F M E+ I
Sbjct: 368 A---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 441 ARPEHYVYMVKLLGSAGELEEAYNL-TQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
+ EHY MV L G AG +EEAY++ Q + + GALL C GN+++ E AQ
Sbjct: 425 PKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQ 484
Query: 500 KLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT 536
+LF+ P + +L IY+ R +DV+ +R M
Sbjct: 485 RLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMV 521
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 205/441 (46%), Gaps = 49/441 (11%)
Query: 41 ATKLVRLYAATNDINSAYHVFDKMSTR--SVYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
++KLVRLYA+ A+ VFD+MS R S + WNS+I +A ++++A++L+ M
Sbjct: 130 SSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED 189
Query: 99 DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEA 158
+KPD +TF V++AC + + +H V G G D +ALV Y+K G + +A
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 159 NRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADP 218
VF+ I D V WNS+++GY + +F M G PD ++ +L +
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS- 308
Query: 219 SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALI 278
G+ LHG + G++ + V + L+ +YS+ + A +F + D V+W+A+I
Sbjct: 309 --FKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII 366
Query: 279 SGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR-HGL 337
S +S+ + L +F ++ K D I +VL+ A T V G + + + +G+
Sbjct: 367 SAHSK---NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGI 423
Query: 338 ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
+ ++ + ++++Y + G + EA+ M
Sbjct: 424 DPKMEHYACMVNLYGRAGMM-------------------------------EEAYSMI-- 450
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEH-YVYMVKLLGSA 456
+ E GL + ALL AC G + G QR+ F ++ EH + ++++ A
Sbjct: 451 VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRL---FELEPDNEHNFELLIRIYSKA 507
Query: 457 GELEEAYNLTQSLPEPVDKAI 477
E+ + Q + VD+ +
Sbjct: 508 KRAEDVERVRQMM---VDRGL 525
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 7/237 (2%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
+H L+K D + LV +YA DI A +VFD + + WNSM+ +
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGL 276
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
A+ +FR M+ I+PD + V+ A +F G R +HG + G+ + +A
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVL-ARVLSFKHG--RQLHGWVIRRGMEWELSVANA 333
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
L+ YSK G + +A +F+ + E D V WN++IS + ++ G++ F M +PD
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPD 390
Query: 205 GYTLAGLLGGIADPSLLCIGQGLHGL-SHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
G T +L A+ ++ G+ L L S + G+D + +V++Y R M+ AY
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY 447
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 219 SLLCIGQGL--HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPD--LVTW 274
SL I G+ H L L ++ + S LV +Y+ C + A+ VF +S D W
Sbjct: 104 SLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAW 163
Query: 275 SALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
++LISGY++ G++E + + ++ + K D VL + +V+ G IH +++
Sbjct: 164 NSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVK 223
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRM 394
G DV V +AL+ MY+KCG + VF ++P ++ +S+NS+++G HG EA +
Sbjct: 224 EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDI 283
Query: 395 FDRILEKGLAPDAATFSALL--------GACCHAGLVNEGRE 428
F +++ G+ PD S++L G H ++ G E
Sbjct: 284 FRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGME 325
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
S +QLH +++ + + A L+ LY+ + A +FD+M R WN++I
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML----RLVHGGAVAS 133
A + + N + F M A+ KPD TF V+ CA+ GM+ RL +
Sbjct: 368 AHS---KNSNGLKYFEQMHRANAKPDGITFVSVLSLCANT---GMVEDGERLFSLMSKEY 421
Query: 134 GLGLDAICCSALVSAYSKLGLVHEA-NRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQ 191
G+ + +V+ Y + G++ EA + + + E +W +L+ Y C + +
Sbjct: 422 GIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALL--YACYLHGNTDIG 479
Query: 192 MFSSMRLVGTRPD 204
++ RL PD
Sbjct: 480 EVAAQRLFELEPD 492
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
+ A++L + + G +H + + L +++ +SS L+ +Y+ CG+ VF M
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 368 PERN--IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+R+ ++NS+ISG G +A ++ ++ E G+ PD TF +L AC G V
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 426 GREIFQRM-KDEFNIKARPEHYVY--MVKLLGSAGELEEAYNLTQSLP 470
G I + + K+ F YV +V + G++ +A N+ +P
Sbjct: 214 GEAIHRDLVKEGFGYDV----YVLNALVVMYAKCGDIVKARNVFDMIP 257
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 214/425 (50%), Gaps = 34/425 (8%)
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD 217
ANRVF+ I P+++++N++I Y + FSSM+ G D YT A LL +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 218 PSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSAL 277
S L G+ +HG ++G + +V +Y+ M A +VF +S ++V W+ +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 278 ISGY-------------------------------SQCGEHEKVLLFFRKLIMERKKLDS 306
I G+ S+CG + L F ++I + D
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 307 ILVATVLASIAQTANVRPGCEIHGYVIRHGLESD-VKVSSALIDMYSKCGFLHFGICVFR 365
V TVL A + G IH GL D + V +AL+D Y K G L +FR
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 366 LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG-LAPDAATFSALLGACCHAGLVN 424
M RN++S+N++ISG ++G +FD ++E+G +AP+ ATF +L C + G V
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSC 484
G E+F M + F ++AR EHY MV L+ +G + EA+ +++P + A+ G+LLS
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 485 CNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGG-LRKMP 543
C S G+ +LAE A +L + P ++ V+LSN+YA +GRW DV+ +R M LRK
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKST 474
Query: 544 GLSWI 548
G S I
Sbjct: 475 GQSTI 479
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 179/401 (44%), Gaps = 35/401 (8%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
R ++HA LL+ L + + + ++ + A VF + +V ++N+MI+ ++
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
L ++S F +M I D YT+A ++++C+ DL + VHG + +G
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWN-------------------------- 174
+V Y+ G + +A +VF+ ++E ++V+WN
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 175 -----SLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
S+IS +++F M G PD T+ +L A +L G+ +H
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHS 258
Query: 230 LSHKSGLDSD-SHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHE 288
+ SGL D VG+ LV Y + +++A +F + ++V+W+ LISG + G+ E
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGE 318
Query: 289 KVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVI-RHGLESDVKVSSA 346
+ F +I E K + VLA + T V G E+ G ++ R LE+ + A
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 347 LIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHG 386
++D+ S+ G + + MP N + S++S HG
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 7/253 (2%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
++R + + D+ H+F +MS RS+ WNSMI + + R A+ LF M+ PD
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC-SALVSAYSKLGLVHEANRVF 162
T V+ A L + +H A +SGL D I +ALV Y K G + A +F
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG-TRPDGYTLAGLLGGIADPSLL 221
+ ++V WN+LISG + + G+ +F +M G P+ T G+L + +
Sbjct: 294 RKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQV 353
Query: 222 CIGQGLHGL-SHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALIS 279
G+ L GL + L++ + +V + SR + A++ ++ N + W +L+S
Sbjct: 354 ERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
Query: 280 GYSQCGEHEKVLL 292
C H V L
Sbjct: 414 A---CRSHGDVKL 423
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
D A RVF I NP+++ ++A+I YS G + L FF + D A +L S
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL------------------- 357
+ +++R G +HG +IR G K+ ++++Y+ G +
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 358 ------------HFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP 405
G+ +F+ M ER+I+S+NS+IS L G EA +F ++++G P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 406 DAATFSALLGACCHAGLVNEGREI 429
D AT +L G+++ G+ I
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWI 256
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 245/526 (46%), Gaps = 55/526 (10%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
LV Y I A +VF+ M R+V W +M++ + A SLF M + +
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERN 140
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
++ + D+ + R ++ D + + ++ + G V EA +F+
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFD 196
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD-----------GYTLAGLL 212
+ E ++V W ++I+GY + DV ++F M P+ GYTL+G +
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------PEKTEVSWTSMLLGYTLSGRI 250
Query: 213 GGIAD--------PSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC 264
+ P + C + ++ + + A RVF
Sbjct: 251 EDAEEFFEVMPMKPVIAC---------------------NAMIVGFGEVGEISKARRVFD 289
Query: 265 SISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRP 324
+ + D TW +I Y + G + L F ++ + + + ++L+ A A+++
Sbjct: 290 LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQY 349
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGL 384
G ++H +++R + DV V+S L+ MY KCG L VF ++II +NS+ISG
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
HG EA ++F + G P+ T A+L AC +AG + EG EIF+ M+ +F + E
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 469
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQN 504
HY V +LG AG++++A L +S+ D + GALL C + +LAE A+KLF+N
Sbjct: 470 HYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN 529
Query: 505 NPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
P + V+LS+I A +W DV +R M T + K PG SWIE
Sbjct: 530 EPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 167/393 (42%), Gaps = 63/393 (16%)
Query: 36 QDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTM 95
+D +T ++ ++ A +FD+M R+V W +MI + + R D A LF M
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 96 LGADIKPDN-----------YTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
P+ YT + I + F++ ++ V I C+A
Sbjct: 230 ------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV-------------IACNA 270
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
++ + ++G + +A RVF+ + + D W +I Y + +F+ M+ G RP
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 205 GYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFC 264
+L +L A + L G+ +H + D D +V S+L++MY +C + A VF
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 265 SISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRP 324
S+ D++ W+++ISGY+ G E+ L F ++ + + + +L + + +
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGL 384
G EI ES M SK F + P + Y+ + LG
Sbjct: 451 GLEI--------FES----------MESK----------FCVTP--TVEHYSCTVDMLGR 480
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
G +A + + + + PDA + ALLGAC
Sbjct: 481 AGQVDKAMELIESMT---IKPDATVWGALLGAC 510
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 147/353 (41%), Gaps = 29/353 (8%)
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
+ CS +S S++G ++EA + F+ + + WNS++SGY + Q+F M
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--- 74
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
+ + + GL+ G ++ + + L + + S + +V Y + + A
Sbjct: 75 -SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS----WTAMVKGYMQEGMVGEA 129
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
+F + + V+W+ + G G +K RK D + V V+AS
Sbjct: 130 ESLFWRMPERNEVSWTVMFGGLIDDGRIDKA----------RKLYDMMPVKDVVASTNMI 179
Query: 320 ANV-RPGCEIHGYVIRHGL-ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
+ R G +I + E +V + +I Y + + +F +MPE+ +S+ S
Sbjct: 180 GGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTS 239
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
++ G L G +A F+ + + P A + ++G G +++ R +F M+D
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVM---PMKPVIACNAMIVG-FGEVGEISKARRVFDLMEDRD 295
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGN 490
N R M+K G EA +L + + + +L+S + C
Sbjct: 296 NATWRG-----MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL +Q+HA L++ D + A+ L+ +Y ++ A VFD+ S++ + +WNS+I
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+A + A+ +F M + P+ T ++ AC+ + G + GL +
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS-----------YAGKLEEGLEI 454
Query: 138 -----DAICCSALVSAYS-------KLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSA 184
C + V YS + G V +A + + +PD +W +L+ C
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG--ACKT 512
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
+ + ++ +L PD LL I
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNAGTYVLLSSI 543
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/408 (18%), Positives = 154/408 (37%), Gaps = 57/408 (13%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K+L L +T+L+ + + + IN A FD + +++ WNS++ + +
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSN 61
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
A LF M ++ +
Sbjct: 62 GLPKEARQLFDEMSERNV---------------------------------------VSW 82
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ LVS Y K ++ EA VF + E ++V W +++ GY +F M
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PE 138
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSH-KSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
+ + + GG+ D + + L+ + K + S + +G L R +D A
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL-----CREGRVDEARL 193
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
+F + ++VTW+ +I+GY Q + RKL + + ++L +
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVD----VARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
+ E + V +A+I + + G + VF LM +R+ ++ +I
Sbjct: 250 IEDAEEFFEVMPM----KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
G EA +F ++ ++G+ P + ++L C + GR++
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 248/483 (51%), Gaps = 46/483 (9%)
Query: 110 VIRACADNFDLGMLRLVHGGAVASGL--GLDAICCSALVSAYSKLGLVHEANRVFNGI-- 165
++R CA L + +H SGL + +AL Y+ G + A ++F+ I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
+E D V W +L+S + M++F MR D ++ L G A L Q
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSA--------- 276
HG++ K G+ + V + L+ MY +C + R+F + +V+W+
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 277 ----------------------LISGYSQCGEHEKVLLFFRKLIME-RKKLDSILVATVL 313
+++GY G +VL +++ L+ + + ++L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 314 ASIAQTANVRPGCEIHGYVIRH----GLES---DVKVSSALIDMYSKCGFLHFGICVFRL 366
++ AQ+ N+ G +H Y ++ G E+ DV V +AL+DMY+KCG + + VFRL
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 367 MPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG 426
M +RN++++N++ SGL +HG MF +++ + + PD TF+A+L AC H+G+V+EG
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 427 REIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCN 486
F ++ + ++ + +HY MV LLG AG +EEA L + +P P ++ +LG+LL C+
Sbjct: 371 WRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 487 SCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGL 545
G E+AE + ++L Q +P + +++++SN+Y +GR D LR + G+RK+PGL
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 546 SWI 548
S I
Sbjct: 490 SSI 492
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 197/443 (44%), Gaps = 48/443 (10%)
Query: 17 KSLLR-AKQLHACLLKTHLSQDP--FYATKLVRLYAATNDINSAYHVFDK--MSTRSVYL 71
+S LR K+LHA L + L + P + + L + YA++ ++ +A +FD+ +S +
Sbjct: 19 RSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVD 78
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
W +++ +F+ N++ LF M ++ D+ + C+ CA DLG + HG AV
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
G+ C+AL+ Y K GLV E R+F + E +V W ++ + G +
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGRE 198
Query: 192 MFSSM----------RLVGTRPDGY----------------------TLAGLLGGIADPS 219
+F M + G G+ TL +L A
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 220 LLCIGQGLHGLSHKSGL-------DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLV 272
L +G+ +H + K + D VG+ LV MY++C +DS+ VF + ++V
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVV 318
Query: 273 TWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYV 332
TW+AL SG + G+ V+ F ++I E K D + VL++ + + V G +
Sbjct: 319 TWNALFSGLAMHGKGRMVIDMFPQMIREVKP-DDLTFTAVLSACSHSGIVDEGWRCFHSL 377
Query: 333 IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEA 391
+GLE V + ++D+ + G + + R MP N + S++ +HG A
Sbjct: 378 RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIA 437
Query: 392 FRMFDRILEKGLAPDAATFSALL 414
R+ +++ ++P + L+
Sbjct: 438 ERIKRELIQ--MSPGNTEYQILM 458
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 250/517 (48%), Gaps = 36/517 (6%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
LV Y +I+ A VFD M R+V W ++++ + + + D A SLF M P+
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PE 138
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGL-------DAICCSALVSAYSKLGLVH 156
+ + ++ + G + L D I ++++ K G V
Sbjct: 139 KNKVSWTVM---------LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 157 EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA 216
EA +F+ ++E ++ W ++++GYG + D ++F M + + + L+G +
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM---PEKTEVSWTSMLMGYVQ 246
Query: 217 DPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSA 276
+ + + + K + ++ + L + + A RVF S+ + +W
Sbjct: 247 NGRIEDAEELFEVMPVKPVIACNAMISGL-----GQKGEIAKARRVFDSMKERNDASWQT 301
Query: 277 LISGYSQCGEHEKVLLFFRKLIMERKKLDSIL--VATVLASIAQTANVRPGCEIHGYVIR 334
+I + + G + L F ++M+++ + + ++L+ A A++ G ++H ++R
Sbjct: 302 VIKIHERNGFELEALDLF--ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRM 394
+ DV V+S L+ MY KCG L +F P ++II +NS+ISG HG EA ++
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419
Query: 395 F-DRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLL 453
F + L P+ TF A L AC +AG+V EG +I++ M+ F +K HY MV +L
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 454 GSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKV 513
G AG EA + S+ D A+ G+LL C + ++AE A+KL + P ++ +
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI 539
Query: 514 MLSNIYAGDGRWDDVKNLRDKMTGGL-RKMPGLSWIE 549
+LSN+YA GRW DV LR M L RK PG SW E
Sbjct: 540 LLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTE 576
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 167/390 (42%), Gaps = 56/390 (14%)
Query: 36 QDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTM 95
+D T ++ ++ A +FD+MS RSV W +M+ + + R D+A +F
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF--- 226
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL-------DAICCSALVSA 148
D+ P+ + + ++ V G + L I C+A++S
Sbjct: 227 ---DVMPEKTEVS---------WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISG 274
Query: 149 YSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTL 208
+ G + +A RVF+ + E + W ++I + + + +F M+ G RP TL
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334
Query: 209 AGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN 268
+L A + L G+ +H + D D +V S+L++MY +C + + +F +
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIME-RKKLDSILVATVLASIAQTANVRPGCE 327
D++ W+++ISGY+ G E+ L F ++ + K + + L++ + V G +
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 328 IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGC 387
I+ +ES VF + P Y ++ LG G
Sbjct: 455 IY-----ESMES-----------------------VFGVKP--ITAHYACMVDMLGRAGR 484
Query: 388 ASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+EA M D + + PDAA + +LLGAC
Sbjct: 485 FNEAMEMIDSMT---VEPDAAVWGSLLGAC 511
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 139/329 (42%), Gaps = 56/329 (17%)
Query: 146 VSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDG 205
++ S++G +HEA ++F+ + WNS+++GY + ++F M PD
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDR 77
Query: 206 YTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCS 265
++ + LVS Y + +D A +VF
Sbjct: 78 NIIS---------------------------------WNGLVSGYMKNGEIDEARKVFDL 104
Query: 266 ISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPG 325
+ ++V+W+AL+ GY G+ + F K+ + K + +L Q +
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNK----VSWTVMLIGFLQDGRIDDA 160
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLH 385
C+++ + + D +++I K G + +F M ER++I++ ++++G G +
Sbjct: 161 CKLYEMI----PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEH 445
+A ++FD + EK +++++L G + + E+F+ M + I
Sbjct: 217 NRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNA-- 270
Query: 446 YVYMVKLLGSAGELEEAYNLTQSLPEPVD 474
M+ LG GE+ +A + S+ E D
Sbjct: 271 ---MISGLGQKGEIAKARRVFDSMKERND 296
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
SL KQ+HA L++ D + A+ L+ +Y ++ + +FD+ ++ + +WNS+I
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS 405
Query: 78 AFALSQRFDNAVSLFRTM-LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL- 135
+A + A+ +F M L KP+ TF + AC+ + G V GL
Sbjct: 406 GYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS-----------YAGMVEEGLK 454
Query: 136 ---------GLDAICC--SALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCS 183
G+ I + +V + G +EA + + + EPD +W SL+
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 184 AAWDVGMQMFSSMRLVGTRPDG 205
+ DV F + +L+ P+
Sbjct: 515 SQLDVA--EFCAKKLIEIEPEN 534
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
+F MP+RNIIS+N ++SG +G EA ++FD + E+ + +++AL+ H G
Sbjct: 70 LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGK 125
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSLPEPVDKAILGA 480
V+ +F +M ++ + + V L+G G +++A L + +P+ + A
Sbjct: 126 VDVAESLFWKMPEKNKVS-------WTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSM 178
Query: 481 LLSCCNSCGNSELAE--------------TVAQKLFQNNPADNA---FKVMLSNI----- 518
+ C E E T+ QNN D+A F VM
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWT 238
Query: 519 -----YAGDGRWDDVKNLRDKM 535
Y +GR +D + L + M
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVM 260
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 219/411 (53%), Gaps = 4/411 (0%)
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLV---LWNSLISGYGCSAAWDVGMQMFSSMRLV 199
S L++ +S + A ++F+ + + L+ +W ++ GY + + + ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
P ++++ L D L +G+G+H K D V ++L+ +Y D A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
+VF +S ++VTW++LIS S+ ++ FRK+ E + T+L + ++
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
A + G EIH +++ + DV + ++L+DMY KCG + + VF +M +++ S+N ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
+ ++G E +F+ ++E G+APD TF ALL C GL G +F+RMK EF +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
EHY +V +LG AG+++EA + +++P +I G+LL+ C GN + E A+
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
Query: 500 KLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+LF P + VM+SNIYA WD+V +R+ M G++K G SW++
Sbjct: 531 ELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQ 581
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 187/398 (46%), Gaps = 25/398 (6%)
Query: 9 HSELSNVCKSLLRAKQLH-------ACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVF 61
+++L + C S AK LH L L +P +KL+ L++ ++ A +F
Sbjct: 134 YTDLLHACIS---AKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIF 190
Query: 62 DKMSTRSVY---LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNF 118
D ++ S+ +W +M ++ + +A+ ++ ML + I+P N++ + ++AC D
Sbjct: 191 DDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLK 250
Query: 119 DLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLIS 178
DL + R +H V +D + + L+ Y + GL +A +VF+G++E ++V WNSLIS
Sbjct: 251 DLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLIS 310
Query: 179 GYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDS 238
+F M+ TL +L + + L G+ +H KS
Sbjct: 311 VLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKP 370
Query: 239 DSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
D + + L+ MY +C ++ + RVF + DL +W+ +++ Y+ G E+V+ F +I
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSA------LIDMYS 352
D I +L+ + T G +G + ++++ +VS A L+D+
Sbjct: 431 ESGVAPDGITFVALLSGCSDT-----GLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 353 KCGFLHFGICVFRLMPERNIIS-YNSVISGLGLHGCAS 389
+ G + + V MP + S + S+++ LHG S
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVS 523
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 257/519 (49%), Gaps = 65/519 (12%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIK 101
T +V Y + ++ A +F +M R+V WN+MI +A S R D A+ LF M +I
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI- 171
Query: 102 PDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL-------DAICCSALVSAYSKLGL 154
++ +++A LV G + + L D + +A+V +K G
Sbjct: 172 ---VSWNSMVKA-----------LVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGK 217
Query: 155 VHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG 214
V EA R+F+ + E +++ WN++I+GY + D Q+F M
Sbjct: 218 VDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM------------------ 259
Query: 215 IADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTW 274
P + D + +++ + R + M+ A +F + ++++W
Sbjct: 260 ---P------------------ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISW 298
Query: 275 SALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVI 333
+ +I+GY + E+E+ L F K++ + K + ++L++ + A + G +IH +
Sbjct: 299 TTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLIS 358
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFR--LMPERNIISYNSVISGLGLHGCASEA 391
+ + + V+SAL++MYSK G L +F L+ +R++IS+NS+I+ HG EA
Sbjct: 359 KSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEA 418
Query: 392 FRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVK 451
M++++ + G P A T+ LL AC HAGLV +G E F+ + + ++ R EHY +V
Sbjct: 419 IEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVD 478
Query: 452 LLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAF 511
L G AG L++ N + ++ GA+LS CN +A+ V +K+ + D
Sbjct: 479 LCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGT 538
Query: 512 KVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
V++SNIYA +G+ ++ +R KM GL+K PG SW++
Sbjct: 539 YVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVK 577
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 223/436 (51%), Gaps = 38/436 (8%)
Query: 148 AYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYT 207
AY+ G + + +F+ +PDL L+ + I+ + D ++ + P+ +T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 208 LAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF---- 263
+ LL + S G+ +H K GL D +V + LV +Y++ + SA +VF
Sbjct: 133 FSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 264 ------------C---------------SISNPDLVTWSALISGYSQCGEHEKVLLFFRK 296
C S+ D+V+W+ +I GY+Q G L+ F+K
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 297 LIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
L+ E K K D I V L++ +Q + G IH +V + +VKV + LIDMYSKCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 356 FLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE-KGLAPDAATFSALL 414
L + VF P ++I+++N++I+G +HG + +A R+F+ + GL P TF L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 415 GACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVD 474
AC HAGLVNEG IF+ M E+ IK + EHY +V LLG AG+L+ AY +++ D
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 475 KAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDK 534
+ ++L C G+ L + +A+ L N ++ V+LSNIYA G ++ V +R+
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 535 MT-GGLRKMPGLSWIE 549
M G+ K PG+S IE
Sbjct: 489 MKEKGIVKEPGISTIE 504
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 200/479 (41%), Gaps = 87/479 (18%)
Query: 24 QLHACLLKTHLSQDPFYAT---KLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
Q+HA +L+ +L P Y KL R YA+ I + +F + ++L+ + I +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA- 139
++ D A L+ +L ++I P+ +TF+ ++++C+ +L+H + GLG+D
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG----KLIHTHVLKFGLGIDPY 162
Query: 140 ------------------------------ICCSALVSAYSKLGLVHEANRVFNGIAEPD 169
+ +A+++ Y+K G V A +F+ + E D
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT-RPDGYTLAGLLGGIADPSLLCIGQGLH 228
+V WN +I GY + + +F + G +PD T+ L + L G+ +H
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHE 288
S + + V + L+ MYS+C ++ A VF D+V W+A+I+GY+ G +
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 289 KVLLFFRKL--IMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSA 346
L F ++ I + D + T+ A
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQAC------------------------------- 371
Query: 347 LIDMYSKCGFLHFGICVFRLMPER-----NIISYNSVISGLGLHGCASEAFRMFDRILEK 401
+ G ++ GI +F M + I Y ++S LG G + R ++ I
Sbjct: 372 -----AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAG---QLKRAYETIKNM 423
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
+ D+ +S++LG+C G G+EI + + NIK YV + + S G+ E
Sbjct: 424 NMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIG-LNIK-NSGIYVLLSNIYASVGDYE 480
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 141/322 (43%), Gaps = 44/322 (13%)
Query: 1 MLTQIQWLHSELSN---VCKSLLRA------KQLHACLLKTHLSQDPFYATKLVRLYAAT 51
L +Q L SE++ SLL++ K +H +LK L DP+ AT LV +YA
Sbjct: 115 FLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKG 174
Query: 52 NDINSAYHVFDKMSTRS-------------------------------VYLWNSMIRAFA 80
D+ SA VFD+M RS + WN MI +A
Sbjct: 175 GDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA 234
Query: 81 LSQRFDNAVSLFRTMLG-ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
++A+ LF+ +L KPD T + AC+ L R +H +S + L+
Sbjct: 235 QHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNV 294
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR-L 198
C+ L+ YSK G + EA VFN D+V WN++I+GY +++F+ M+ +
Sbjct: 295 KVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI 354
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G +P T G L A L+ G + + + G+ LVS+ R +
Sbjct: 355 TGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLK 414
Query: 258 SAYRVFCSIS-NPDLVTWSALI 278
AY +++ + D V WS+++
Sbjct: 415 RAYETIKNMNMDADSVLWSSVL 436
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 269/568 (47%), Gaps = 85/568 (14%)
Query: 57 AYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD 116
A +FD+M R+V WN+++ + + A +F M D+ ++ +I+ +
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIE 212
Query: 117 NFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSL 176
N + +L+ G + + +++V Y + G V EA R+F + E ++V W ++
Sbjct: 213 NDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 177 ISGYGCSAAWDVGMQMFSSMR--LVGTRPDGYTLAGLL---GGIADPSLLCIGQGLHGLS 231
ISG+ + + + +F M+ + P+G TL L GG+ +G+ LH
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG-VEFRRLGEQLHAQV 327
Query: 232 HKSGLDSDSHVGSL---LVSMYSRCKCMDSAYRVF--------CSI------SNPDL--- 271
+G ++ H G L LV MY+ + SA + C+I N DL
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERA 387
Query: 272 -------------VTWSALISGYSQCGEHEKVLLFFRKL--------------------I 298
V+W+++I GY + G+ + F+KL
Sbjct: 388 ETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELF 447
Query: 299 MERKKLDSILV-----------ATVLASIAQTANVRPGCEIHGYVIRHG--LESDVKVSS 345
E L S +V + +L+S T+N+ G IH + + + D+ + +
Sbjct: 448 AEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 346 ALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP 405
+L+ MY+KCG + +F M +++ +S+NS+I GL HG A +A +F +L+ G P
Sbjct: 508 SLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKP 567
Query: 406 DAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNL 465
++ TF +L AC H+GL+ G E+F+ MK+ ++I+ +HY+ M+ LLG AG+L+EA
Sbjct: 568 NSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEF 627
Query: 466 TQSLPEPVDKAILGALLSCCNSCGNSE----LAETVAQKLFQNNPADNAFKVMLSNIYAG 521
+LP D + GALL C + +AE A +L + +P + V L N+YAG
Sbjct: 628 ISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAG 687
Query: 522 DGRWDDVKNLRDKM-TGGLRKMPGLSWI 548
GR D K +R +M G++K PG SW+
Sbjct: 688 LGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 190/480 (39%), Gaps = 89/480 (18%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLG--AD 99
T +V Y D+ AY +F +M R++ W +MI FA ++ + A+ LF M
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 100 IKPDNYTFACVIRAC---------------ADNFDLGMLRLVHGGAVASGL--------- 135
+ P+ T + AC A G + H G +A L
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 136 ----------GLDAICCSALVSAYSKLGLVHEANRVFNGIAE-PDLVLWNSLISGY---- 180
D C+ +++ Y K G + A +F + D V W S+I GY
Sbjct: 355 IASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAG 414
Query: 181 --------------GCSAAWDV-------------GMQMFSSMRLVGTRPDGYTLAGLLG 213
W V + S M G +P T + LL
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 214 GIADPSLLCIGQGLHGLSHKSG--LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDL 271
S L G+ +H + K+ D D + + LVSMY++C ++ AY +F + D
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Query: 272 VTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI--- 328
V+W+++I G S G +K L F++++ KK +S+ VL++ + + + G E+
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKA 594
Query: 329 --HGYVIRHGLESDVKVSSALIDMYSKCGFLHFG---ICVFRLMPERNIISYNSVISGLG 383
Y I+ G++ + ++ID+ + G L I P+ + Y +++ G
Sbjct: 595 MKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEEFISALPFTPDHTV--YGALLGLCG 648
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGAC-CHAGLVNEGR-EIFQRMKDEFNIKA 441
L+ +A + +R + L D + C +AGL GR ++ + M+ E IK
Sbjct: 649 LNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGL---GRHDMEKEMRKEMGIKG 705
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 177/396 (44%), Gaps = 43/396 (10%)
Query: 57 AYHVFDKMSTRS----VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIR 112
A H+ DK+ R V W S++ +A + D A LF M +I N ++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 113 ACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVL 172
N + R + V+ + L A+C G +A +F+ + E ++V
Sbjct: 121 CRRMNEAWTLFREMPKNVVSWTVMLTALCDD---------GRSEDAVELFDEMPERNVVS 171
Query: 173 WNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSH 232
WN+L++G + + Q+F +M D + ++ G + G+
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAM----PSRDVVSWNAMIKGYIE------NDGMEEAKL 221
Query: 233 KSGLDSDSHVGSLLVSMYSRCKCMD--SAYRVFCSISNPDLVTWSALISGYSQCGEHEKV 290
G S+ +V + +Y C+ D AYR+FC + ++V+W+A+ISG++ + +
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 281
Query: 291 LLFFRKLIMERKKLDSILV-ATVLASIAQTAN------VRPGCEIHGYVIRHGLES---D 340
L+ F ++ +K +D++ L S+A R G ++H VI +G E+ D
Sbjct: 282 LMLFLEM---KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHD 338
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+++ +L+ MY+ G + + L ++ S N +I+ +G A +F+R+
Sbjct: 339 GRLAKSLVHMYASSGLIASAQSL--LNESFDLQSCNIIINRYLKNGDLERAETLFERV-- 394
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
K L D ++++++ AG V+ +FQ++ D+
Sbjct: 395 KSLH-DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 429
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 18 SLLRAKQLHACLLKTHLSQDP--FYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
+L + K +H + KT DP LV +YA I AY +F KM + WNSM
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM 540
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
I + D A++LF+ ML + KP++ TF V+ AC+ H G + GL
Sbjct: 541 IMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS-----------HSGLITRGL 589
Query: 136 GL 137
L
Sbjct: 590 EL 591
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 197/329 (59%), Gaps = 2/329 (0%)
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
+G+ +H + +SG S +V + L+ +Y+ C + SAY+VF + DLV W+++I+G++
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVK 342
+ G+ E+ L + ++ + K D + ++L++ A+ + G +H Y+I+ GL ++
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 343 VSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE-K 401
S+ L+D+Y++CG + +F M ++N +S+ S+I GL ++G EA +F + +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEE 461
GL P TF +L AC H G+V EG E F+RM++E+ I+ R EH+ MV LL AG++++
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 462 AYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAG 521
AY +S+P + I LL C G+S+LAE ++ Q P + V+LSN+YA
Sbjct: 246 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 305
Query: 522 DGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+ RW DV+ +R +M G++K+PG S +E
Sbjct: 306 EQRWSDVQKIRKQMLRDGVKKVPGHSLVE 334
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 154/323 (47%), Gaps = 10/323 (3%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+ +H+ ++++ + L+ LYA D+ SAY VFDKM + + WNS+I FA +
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ + A++L+ M IKPD +T ++ ACA L + + VH + GL +
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV-GT 201
+ L+ Y++ G V EA +F+ + + + V W SLI G + +++F M G
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 202 RPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
P T G+L + ++ G + + + ++ +V + +R + AY
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 261 RVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL---DSILVATVLASI 316
S+ P++V W L+ + G+ + + F R I++ + D +L++ + AS
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDSD-LAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 317 AQTANVRPGCEIHGYVIRHGLES 339
+ ++V+ +I ++R G++
Sbjct: 307 QRWSDVQ---KIRKQMLRDGVKK 326
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 147/302 (48%), Gaps = 11/302 (3%)
Query: 119 DLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLIS 178
D+ + +H + SG G ++L+ Y+ G V A +VF+ + E DLV WNS+I+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 179 GYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDS 238
G+ + + + +++ M G +PDG+T+ LL A L +G+ +H K GL
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 239 DSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
+ H ++L+ +Y+RC ++ A +F + + + V+W++LI G + G ++ + F+ +
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 299 MERKKLD-SILVATVLASIAQTANVRPGCEIHGYVIR----HGLESDVKVSSALIDMYSK 353
L I +L + + V+ G E Y R + +E ++ ++D+ ++
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 354 CGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSA 412
G + + MP + N++ + +++ +HG + A F RI L P+ +
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHSGDYV 297
Query: 413 LL 414
LL
Sbjct: 298 LL 299
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 33/186 (17%)
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
A+VR G IH VIR G S + V ++L+ +Y+ CG + VF MPE++++++NSVI
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
+G +G EA ++ + KG+ PD T +LL AC G + G+ +
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV---------- 111
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
+VYM+K+ LT++L LL CG E A+T+
Sbjct: 112 ------HVYMIKV-----------GLTRNLHSS------NVLLDLYARCGRVEEAKTLFD 148
Query: 500 KLFQNN 505
++ N
Sbjct: 149 EMVDKN 154
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 31/203 (15%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L K++H ++K L+++ + L+ LYA + A +FD+M ++ W S+I
Sbjct: 104 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 163
Query: 78 AFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
A++ A+ LF+ M + + P TF ++ AC+ H G V G
Sbjct: 164 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-----------HCGMVKEGFE 212
Query: 137 --------------LDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYG 181
++ C +V ++ G V +A + +P++V+W +L+
Sbjct: 213 YFRRMREEYKIEPRIEHFGC--MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG--A 268
Query: 182 CSAAWDVGMQMFSSMRLVGTRPD 204
C+ D + F+ ++++ P+
Sbjct: 269 CTVHGDSDLAEFARIQILQLEPN 291
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 230/478 (48%), Gaps = 39/478 (8%)
Query: 106 TFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVS---AYSKLGLVHEANRVF 162
T +C+ R C+ +L + +H + +GL D+ + +S + + + A VF
Sbjct: 17 TMSCLQR-CSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC 222
+G PD LWN +I G+ CS + + ++ M + YT LL ++ S
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
+H K G ++D + + L++ Y+ A+ +F I PD V+W+++I GY
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 283 QCGEHEKVLLFFRKLI------------------MERKKL-------------DSILVAT 311
+ G+ + L FRK+ M ++ L D++ +A
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERN 371
L++ AQ + G IH Y+ + + D + LIDMY+KCG + + VF+ + +++
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
+ ++ ++ISG HG EA F + + G+ P+ TF+A+L AC + GLV EG+ IF
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 432 RMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNS 491
M+ ++N+K EHY +V LLG AG L+EA Q +P + I GALL C N
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432
Query: 492 ELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWI 548
EL E + + L +P V +NI+A D +WD R M G+ K+PG S I
Sbjct: 433 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 190/448 (42%), Gaps = 67/448 (14%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRL---YAATNDINSAYHVFDKMSTRSVYLW 72
C KQ+HA +LKT L QD + TK + +++ + A VFD +LW
Sbjct: 24 CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLW 83
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N MIR F+ S + ++ L++ ML + + YTF +++AC++ +H
Sbjct: 84 NLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITK 143
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDV---- 188
G D ++L+++Y+ G A+ +F+ I EPD V WNS+I GY + D+
Sbjct: 144 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 189 ---------------------------GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLL 221
+Q+F M+ PD +LA L A L
Sbjct: 204 FRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY 281
G+ +H +K+ + DS +G +L+ MY++C M+ A VF +I + W+ALISGY
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY 323
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
+ G + + F ++ K + I VL + + T V G +I + +E D
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE-----EGKLIFYSMERD- 377
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEK 401
+ L P I Y ++ LG G EA R I E
Sbjct: 378 ----------------------YNLKP--TIEHYGCIVDLLGRAGLLDEAKRF---IQEM 410
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREI 429
L P+A + ALL AC + G EI
Sbjct: 411 PLKPNAVIWGALLKACRIHKNIELGEEI 438
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 274/584 (46%), Gaps = 61/584 (10%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATND---------INSAYHV--FDKM 64
CK+ Q+H L+KT + ++ T++V +A++ + YHV F
Sbjct: 22 CKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFG 81
Query: 65 STRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLR 124
+LWN++I++ + + A+ L ML + D ++ + V++AC+ LG ++
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSR---LGFVK 138
Query: 125 ---LVHGGAVASGL--------------------GL-----------DAICCSALVSAYS 150
+HG +GL GL D++ ++++ Y
Sbjct: 139 GGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYV 198
Query: 151 KLGLVHEANRVFN--GIAEPDLVLWNSLISGYG-CSAAWDVGMQMFSSMRLVGTRPDGYT 207
K GL+ A +F+ + +L+ WNS+ISGY S D+ ++F+ M D +
Sbjct: 199 KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM----PEKDLIS 254
Query: 208 LAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
++ G + +GL + + D + ++ Y++ + A +F +
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL-DSILVATVLASIAQTANVRPGC 326
+ D+V ++++++GY Q H + L F + E L D + VL +IAQ +
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 327 EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHG 386
++H Y++ K+ ALIDMYSKCG + + VF + ++I +N++I GL +HG
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 387 CASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHY 446
AF M +I L PD TF +L AC H+GLV EG F+ M+ + I+ R +HY
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 447 VYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNP 506
MV +L +G +E A NL + +P + I L+ C+ E E VA+ L
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAG 550
Query: 507 ADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ + V+LSN+YA G W DV+ +R M + K+PG SWIE
Sbjct: 551 YNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 132/326 (40%), Gaps = 31/326 (9%)
Query: 48 YAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLG-ADIKPDNYT 106
YA ++ A +FD+M R V +NSM+ + ++ A+ +F M + + PD+ T
Sbjct: 293 YAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTT 352
Query: 107 FACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA 166
V+ A A L +H V L AL+ YSK G + A VF GI
Sbjct: 353 LVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE 412
Query: 167 EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLG-----GIADPSLL 221
+ WN++I G + M + + +PD T G+L G+ LL
Sbjct: 413 NKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLL 472
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISG 280
C + K ++ +V + SR ++ A + + P+ V W ++
Sbjct: 473 C----FELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTA 528
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDS--ILVATVLASIAQTANVR--------------P 324
S E E L + LI++ S +L++ + AS +VR P
Sbjct: 529 CSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIP 588
Query: 325 GC---EIHGYVIRHGLESDVKVSSAL 347
GC E+ G V ++S ++VSS L
Sbjct: 589 GCSWIELDGRVHEFFVDS-IEVSSTL 613
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 244/534 (45%), Gaps = 38/534 (7%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS-TRSVYLWNSMIR 77
LLR +Q+H +KT D L+ +YA I+ A ++F+ M ++ W SM+
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
++ + A+ FR + + + YTF V+ ACA + VH V SG
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+ SAL+ Y+K + A + G+ D+V WNS+I G + MF M
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 198 LVGTRPDGYTLAGLLGGIA-DPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+ D +T+ +L A + + I H L K+G + V + LV MY++ M
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM 380
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
DSA +VF + D+++W+AL++G + G +++ L F + + D I+ A+VL++
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSAS 440
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
A+ + G ++HG I+ G S + V+++L+ MY+KCG L +F M R++I++
Sbjct: 441 AELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWT 500
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+I G +G +A R FD M+
Sbjct: 501 CLIVGYAKNGLLEDAQRYFD-----------------------------------SMRTV 525
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
+ I PEHY M+ L G +G+ + L + D + A+L+ GN E E
Sbjct: 526 YGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGER 585
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A+ L + P + V LSN+Y+ GR D+ N+R M + K PG SW+E
Sbjct: 586 AAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVE 639
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 213/449 (47%), Gaps = 34/449 (7%)
Query: 14 NVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWN 73
N K L K +C+ ++ + ++ L+ + + ++ A +FDKM R + WN
Sbjct: 5 NYRKWRLPLKPFGSCI-HSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWN 63
Query: 74 SMIRAFALSQRFDNAVSLFRT-------------------------------MLGADIKP 102
+MI A++ S+R +A LFR+ M IKP
Sbjct: 64 TMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKP 123
Query: 103 DNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF 162
+ YT V+R C L +HG + +G LD + L++ Y++ + EA +F
Sbjct: 124 NEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLF 183
Query: 163 NGI-AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLL 221
+ E + V W S+++GY + ++ F +R G + + YT +L A S
Sbjct: 184 ETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY 281
+G +H KSG ++ +V S L+ MY++C+ M+SA + + D+V+W+++I G
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT-ANVRPGCEIHGYVIRHGLESD 340
+ G + L F ++ K+D + ++L A + ++ H +++ G +
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
V++AL+DMY+K G + + VF M E+++IS+ ++++G +G EA ++F +
Sbjct: 364 KLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREI 429
G+ PD +++L A L+ G+++
Sbjct: 424 GGITPDKIVTASVLSASAELTLLEFGQQV 452
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 253/533 (47%), Gaps = 45/533 (8%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+QLH + K + + L+R Y ++ + A+ VFD+M V WNS++ + S
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL-DAIC 141
RF + LF + +D+ P+ ++F + ACA + +H V GL + +
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
+ L+ Y K G + +A VF + E D V WN++++ + ++G+ F M
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----P 250
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
PD T L+ KSG ++A++
Sbjct: 251 NPDTVTYNELIDAFV----------------KSG-------------------DFNNAFQ 275
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
V + NP+ +W+ +++GY + + FF K+ + D ++ VLA++A A
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
V G IH + GL+S V V+SALIDMYSKCG L +F MP +N+I +N +ISG
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISG 395
Query: 382 LGLHGCASEAFRMFDRI-LEKGLAPDAATFSALLGACCHAGLVNEGR-EIFQRMKDEFNI 439
+G + EA ++F+++ E+ L PD TF LL C H + E F+ M +E+ I
Sbjct: 396 YARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRI 455
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
K EH +++ +G GE+ +A + Q D ALL C++ + + A+TVA
Sbjct: 456 KPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAA 515
Query: 500 KLFQNNPADNA--FKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
K+ + AD +++SN+YA RW +V +R M G+ K G SWI+
Sbjct: 516 KMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 5/237 (2%)
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
G +PD L LL + + + + LHG K G S++ + + L+ Y ++ A
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDA 109
Query: 260 YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQT 319
++VF + +PD+++W++L+SGY Q G ++ + F +L + LA+ A+
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Query: 320 ANVRPGCEIHGYVIRHGLES-DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
G IH +++ GLE +V V + LIDMY KCGF+ + VF+ M E++ +S+N++
Sbjct: 170 HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAI 229
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
++ +G F ++ PD T++ L+ A +G N ++ M +
Sbjct: 230 VASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDMPN 282
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 155/369 (42%), Gaps = 50/369 (13%)
Query: 47 LYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRT---MLGADIKPD 103
L +N + HV S+ S W++++ A A RF ++ + R ++ KPD
Sbjct: 2 LRTVSNAFTTRSHVGSTASSNS---WSTIVPALA---RF-GSIGVLRAAVELINDGEKPD 54
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
++R + + + R +HG G + ++L+ Y + +A++VF+
Sbjct: 55 ASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFD 114
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
+ +PD++ WNSL+SGY S + G+ +F + P+ ++ L A L +
Sbjct: 115 EMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPL 174
Query: 224 GQGLHGLSHKSGLDS-DSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
G +H K GL+ + VG+ L+ MY +C MD A VF + D V+W+A+++ S
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVK 342
+ G+ E L FF ++ D
Sbjct: 235 RNGKLELGLWFFHQMP---------------------------------------NPDTV 255
Query: 343 VSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
+ LID + K G + V MP N S+N++++G + EA F ++ G
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
Query: 403 LAPDAATFS 411
+ D + S
Sbjct: 316 VRFDEYSLS 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 2/221 (0%)
Query: 273 TWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYV 332
+WS ++ ++ G VL +LI + +K D+ + +L V ++HGYV
Sbjct: 23 SWSTIVPALARFGS-IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 333 IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAF 392
+HG S+ ++S++L+ Y L VF MP+ ++IS+NS++SG G E
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 393 RMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKL 452
+F + + P+ +F+A L AC L G I ++ K ++ +
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 453 LGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSEL 493
G G +++A + Q + E D A+++ C+ G EL
Sbjct: 202 YGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLEL 241
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 247/489 (50%), Gaps = 14/489 (2%)
Query: 54 INSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACV--I 111
+N+A +FD+M R V WN+MI + + +F M +I+P +TF+ + +
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 112 RACADNFDLGMLRLVHGGAVASGLG-LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDL 170
C + + +HG A+ SG+ + + ++++ Y +LG+ A VF + + D+
Sbjct: 146 VTCVRHGEQ-----IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 171 VLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL 230
V WN LI S +V + F MR + +PD YT++ ++ +D L G+ L
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 231 SHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQ--CGEHE 288
K G S+S V + M+S+C +D + ++F + D V +++I YS CGE
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE-- 318
Query: 289 KVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALI 348
L F + + + D ++VL+S+ + G ++H VI+ G + D V+++L+
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDHGADVHSLVIKLGFDLDTAVATSLM 377
Query: 349 DMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL-EKGLAPDA 407
+MY K G + + VF +++I +N+VI GL + A E+ +F+++L + L PD
Sbjct: 378 EMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDR 437
Query: 408 ATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQ 467
T +L ACC+AG VNEG +IF M+ + EHY +++LL G + EA ++
Sbjct: 438 VTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIAD 497
Query: 468 SLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDD 527
+P I +L G++ LAETVA+ + ++ P + ++L IY RW++
Sbjct: 498 KIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWEN 557
Query: 528 VKNLRDKMT 536
LR M
Sbjct: 558 SVKLRYAMN 566
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 140/282 (49%), Gaps = 9/282 (3%)
Query: 151 KLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAG 210
K G ++ A +F+ + E D+V WN++ISG + G+++F M+ RP +T +
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 211 LLGGIADPSLLCI--GQGLHGLSHKSGLDS-DSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
L + C+ G+ +HG + SG+ + V + ++ MY R D A VF ++
Sbjct: 142 LASLVT-----CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
+ D+V+W+ LI S G E L F + + D V+ V++ + + G +
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 328 IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGC 387
I+ G S+ V A IDM+SKC L + +FR + + + + NS+I H C
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 316
Query: 388 ASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+A R+F + + + PD TFS++L + +A +++ G ++
Sbjct: 317 GEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADV 357
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 3/317 (0%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
++ +Y + A VF M R V WN +I + + S + A+ F M +I+PD
Sbjct: 175 VMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN 163
YT + V+ C+D +L + + G ++I A + +SK + ++ ++F
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
+ + D VL NS+I Y + +++F RPD +T + +L + + +L
Sbjct: 295 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDH 353
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQ 283
G +H L K G D D+ V + L+ MY + +D A VF DL+ W+ +I G ++
Sbjct: 354 GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR 413
Query: 284 CGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGCEIHGYVIR-HGLESDV 341
+ L F +L+M + K D + + +L + V G +I + + HG+
Sbjct: 414 NSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGN 473
Query: 342 KVSSALIDMYSKCGFLH 358
+ + +I++ + G ++
Sbjct: 474 EHYACIIELLCRVGMIN 490
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 217/414 (52%), Gaps = 4/414 (0%)
Query: 138 DAICCSALVSAYSKLG-LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ + S LV AYSKL L + VF + ++ WN +I + S + +F M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 197 -RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
R RPD +TL +L + G +H L K G S V S LV MY
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
+ A ++F + D V ++A+ GY Q GE L FR++ LDS+++ ++L +
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
Q ++ G +HG+ IR + + +A+ DMY KC L + VF M R++IS+
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
+S+I G GL G +F++FD +L++G+ P+A TF +L AC H GLV E ++ R+
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV-EKSWLYFRLMQ 363
Query: 436 EFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAE 495
E+NI +HY + + AG LEEA + +P D+A++GA+LS C GN E+ E
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 496 TVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWI 548
VA++L Q P ++ V L+ +Y+ GR+D+ ++LR M + K+PG S I
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 192/447 (42%), Gaps = 48/447 (10%)
Query: 32 THLSQDPFYATKLVRLYAATNDI-NSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVS 90
T L + ++KLV Y+ N + ++ VF M R+++ WN +I F+ S ++
Sbjct: 60 TFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSID 119
Query: 91 LFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAY 149
LF M ++PD++T ++RAC+ + + L+H + G SALV Y
Sbjct: 120 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 150 SKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLA 209
+G + A ++F+ + D VL+ ++ GY +G+ MF M G D +
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 210 GLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP 269
LL L G+ +HG + ++G+ + MY +C +D A+ VF ++S
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 270 DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIH 329
D+++WS+LI GY G+ ++M K D +L
Sbjct: 300 DVISWSSLILGYGLDGD----------VVMSFKLFDEML--------------------- 328
Query: 330 GYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS----YNSVISGLGLH 385
+ G+E + ++ + G + FRLM E NI+ Y SV +
Sbjct: 329 ----KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRA 384
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP-E 444
G EA + + + K PD A A+L C G V G + + + +K R
Sbjct: 385 GLLEEAEKFLEDMPVK---PDEAVMGAVLSGCKVYGNVEVGERVAREL---IQLKPRKAS 438
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPE 471
+YV + L +AG +EA +L Q + E
Sbjct: 439 YYVTLAGLYSAAGRFDEAESLRQWMKE 465
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
+H LK S F ++ LV +Y + A +FD M R L+ +M +
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV--ASGLGLDAICC 142
+++FR M + D+ ++ AC L + VHG + S LGL+
Sbjct: 216 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN--LG 273
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+A+ Y K ++ A+ VF ++ D++ W+SLI GYG + ++F M G
Sbjct: 274 NAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIE 333
Query: 203 PDGYTLAGLL-----GGIADPSLL 221
P+ T G+L GG+ + S L
Sbjct: 334 PNAVTFLGVLSACAHGGLVEKSWL 357
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 264/546 (48%), Gaps = 51/546 (9%)
Query: 12 LSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL 71
L + CK + +HA +L+ + A +LV + + + +F R+ ++
Sbjct: 35 LIHACKDTASLRHVHAQILRRGVLSSRV-AAQLVSCSSLLKSPDYSLSIFRNSEERNPFV 93
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML---RLVHG 128
N++IR + RF+++V F ML +KPD TF V+++ N LG R +H
Sbjct: 94 LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKS---NSKLGFRWLGRALHA 150
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVF----NGIAEPDLVLWNSLISGYGCSA 184
+ + + D+ +LV Y+K G + A +VF + I + +++WN LI+GY +
Sbjct: 151 ATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
+ +F SM + +S S
Sbjct: 211 DMHMATTLFRSMP---------------------------------------ERNSGSWS 231
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
L+ Y ++ A ++F + ++V+W+ LI+G+SQ G++E + + +++ + K
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKP 291
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
+ +A VL++ +++ + G IHGY++ +G++ D + +AL+DMY+KCG L VF
Sbjct: 292 NEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVF 351
Query: 365 RLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
M ++I+S+ ++I G +HG +A + F +++ G PD F A+L AC ++ V+
Sbjct: 352 SNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVD 411
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSC 484
G F M+ ++ I+ +HYV +V LLG AG+L EA+ L +++P D AL
Sbjct: 412 LGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA 471
Query: 485 CNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGLRKMP- 543
C + AE+V+Q L + +P + L +A G DV+ R + +++
Sbjct: 472 CKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSL 531
Query: 544 GLSWIE 549
G S+IE
Sbjct: 532 GWSYIE 537
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 240/478 (50%), Gaps = 2/478 (0%)
Query: 74 SMIRAFALSQRFDNAVSLFRTM-LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
S I L RF A LF + + K T+ ++ AC + ++ V+G ++
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
+G + + ++ + K G++ +A R+F+ I E +L + S+ISG+ + ++
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
F M + + +T A +L A + +G+ LH + K G+ ++ V L+ MYS+
Sbjct: 212 FKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSK 271
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
C ++ A F + V W+ +I+GY+ G E+ L + +D ++ +
Sbjct: 272 CGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIM 331
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI 372
+ + A + + H +IR+G ES++ ++AL+D YSK G + VF +P +NI
Sbjct: 332 IRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNI 391
Query: 373 ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQR 432
IS+N+++ G HG ++A ++F++++ +AP+ TF A+L AC ++GL +G EIF
Sbjct: 392 ISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLS 451
Query: 433 MKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSE 492
M + IK R HY M++LLG G L+EA + P + ALL+ C N E
Sbjct: 452 MSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLE 511
Query: 493 LAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
L VA+KL+ P V++ N+Y G+ + + + + + GL MP +W+E
Sbjct: 512 LGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVE 569
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 164/359 (45%), Gaps = 1/359 (0%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KS+ K+++ ++ + + +++ ++ I A +FD++ R++Y + S+I
Sbjct: 137 KSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSII 196
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
F + A LF+ M + +TFA ++RA A + + + +H A+ G+
Sbjct: 197 SGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVV 256
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ L+ YSK G + +A F + E V WN++I+GY + + + M
Sbjct: 257 DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM 316
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
R G D +TL+ ++ + L + + H ++G +S+ + LV YS+ +
Sbjct: 317 RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRV 376
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
D+A VF + ++++W+AL+ GY+ G + F K+I + + VL++
Sbjct: 377 DTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
Query: 317 AQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS 374
A + G EI + HG++ + +I++ + G L I R P + ++
Sbjct: 437 AYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVN 495
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 253/549 (46%), Gaps = 58/549 (10%)
Query: 35 SQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRT 94
S+D F ++ YA I A +F+KM R+ W++MI F + D+AV LFR
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 95 MLGADIKPDNYTFACVIRACADNFDLGMLRLVHG--GAVASGLGLDAICCSALVSAYSKL 152
M D P ++ N L V G G++ SG + L+ Y +
Sbjct: 193 MPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQR 248
Query: 153 GLVHEANRVFNGIAEPDL-----------------VLWNSLISGYGCSAAWDVGMQMFSS 195
G V A +F+ I PDL V WNS+I Y + + S
Sbjct: 249 GQVEAARCLFDQI--PDLCGDDHGGEFRERFCKNVVSWNSMIKAY-------LKVGDVVS 299
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDS-----------DSHVGS 244
RL L + D + + G H S ++ D+H +
Sbjct: 300 ARL------------LFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWN 347
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
++VS Y+ ++ A F V+W+++I+ Y + ++++ + F ++ +E +K
Sbjct: 348 MMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKP 407
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
D + ++L++ N+R G ++H V++ + DV V +ALI MYS+CG + +F
Sbjct: 408 DPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIF 466
Query: 365 RLMP-ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
M +R +I++N++I G HG ASEA +F + G+ P TF ++L AC HAGLV
Sbjct: 467 DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLV 526
Query: 424 NEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLS 483
+E + F M + I+ + EHY +V + G+ EEA + S+P DK + GALL
Sbjct: 527 DEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLD 586
Query: 484 CCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKM 542
C N LA A+ + + P + V+L N+YA G WD+ +R M + ++K
Sbjct: 587 ACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKE 646
Query: 543 PGLSWIEGS 551
G SW++ S
Sbjct: 647 RGSSWVDSS 655
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 164/391 (41%), Gaps = 42/391 (10%)
Query: 54 INSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRA 113
I A +F+K+ R+ WN+MI + + + A LF M D+ N + + +
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV-S 114
Query: 114 CADNFDLGMLRLVHGGAVASGL-GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVL 172
C G+ L + + D+ + ++S Y+K + EA +F + E + V
Sbjct: 115 CG-----GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 173 WNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL-- 230
W+++I+G+ + D + +F M + + P L L+ G+ L + G
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYG 225
Query: 231 SHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDL-----------------VT 273
S SG + + + L+ Y + +++A +F I PDL V+
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI--PDLCGDDHGGEFRERFCKNVVS 283
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
W+++I Y + G+ L F ++ K D+I T++ + + + +
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQM----KDRDTISWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFR 393
D + ++ Y+ G + F PE++ +S+NS+I+ + EA
Sbjct: 340 NR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVN 424
+F R+ +G PD T ++LL A GLVN
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSAS--TGLVN 424
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 145/342 (42%), Gaps = 47/342 (13%)
Query: 153 GLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
G + EA +F + + V WN++ISGY + ++F M + D T ++
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNTMI 109
Query: 213 GGIADPSLLCIGQGLHGLSHKSGL-----DSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
G C G+ L L DS + ++S Y++ + + A +F +
Sbjct: 110 SGYVS----C--GGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
+ V+WSA+I+G+ Q GE + ++ FRK+ ++ DS + ++A + + +
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAW 219
Query: 328 IHGYV--IRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE---------------R 370
+ G + G E V + LI Y + G + C+F +P+ +
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
N++S+NS+I G A +FD++ ++ D +++ ++ H + + +F
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALF 335
Query: 431 QRMKDEFNIKARPEH-YVYMVKLLGSAGELEEAYNLTQSLPE 471
M + R H + MV S G +E A + + PE
Sbjct: 336 SEMPN------RDAHSWNMMVSGYASVGNVELARHYFEKTPE 371
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 268/538 (49%), Gaps = 6/538 (1%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+ L QLH LK D + L+ +YA + + VFD+M R + S+I
Sbjct: 61 EPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSII 120
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD-NFDLGMLRLVHGGAVASGL 135
+ A+ L + M P + A ++ C + R+ H +
Sbjct: 121 NSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDER 180
Query: 136 GLDAICCS-ALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
+++ S ALV Y K A VF+ + + V W ++ISG + +++G+ +F
Sbjct: 181 MQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFR 240
Query: 195 SMRLVGTRPDGYTLAGLLGGIADPSL-LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
+M+ RP+ TL +L + + + + +HG S + G +D + + ++MY RC
Sbjct: 241 AMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRC 300
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
+ + +F + D+V WS++ISGY++ G+ +V+ ++ E + +S+ + ++
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIV 360
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
++ + + +H +++ G S + + +ALIDMY+KCG L VF + E++++
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
S++S+I+ GLHG SEA +F +++ G D F A+L AC HAGLV E + IF +
Sbjct: 421 SWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ- 479
Query: 434 KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSEL 493
++++ EHY + LLG G++++A+ +T ++P I +LLS C + G ++
Sbjct: 480 AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 494 A-ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
A + +A +L ++ P + A V+LS I+ G + + +R M L K G S IE
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 231/473 (48%), Gaps = 51/473 (10%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVS-AYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYG 181
L+ +H + +GL D + S +++ + ++ A VF I + +WN++I G+
Sbjct: 41 LKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFS 100
Query: 182 CSAAWDVGMQMFSSM----------RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS 231
S+ ++ + +F M RL T P + G LG D G+ LHG+
Sbjct: 101 RSSFPEMAISIFIDMLCSSPSVKPQRL--TYPSVFKAYGRLGQARD------GRQLHGMV 152
Query: 232 HKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG------ 285
K GL+ DS + + ++ MY C C+ A+R+F + D+V W+++I G+++CG
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 286 -------------------------EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+ L FR++ + K D + ++L + A
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
G IH Y++R+ E + V +ALIDMY KCG + G+ VF P++ + +NS+I
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
GL +G A +F + GL PD+ +F +L AC H+G V+ E F+ MK+++ I+
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 441 ARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQK 500
+HY MV +LG AG LEEA L +++P D I +LLS C GN E+A+ A+
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 501 LFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIEGSY 552
L + +P + V+LSN YA G +++ R M + K G S IE +
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDF 505
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 208/457 (45%), Gaps = 39/457 (8%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLY-AATNDINSAYHVFDKMSTRSVYLWNS 74
C ++ KQ+HA L+KT L D A++++ A+ +D+N AY VF +++ ++ ++WN+
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 75 MIRAFALSQRFDNAVSLFRTML--GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
+IR F+ S + A+S+F ML +KP T+ V +A R +HG +
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 133 SGL-------------------------------GLDAICCSALVSAYSKLGLVHEANRV 161
GL G D + ++++ ++K GL+ +A +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 162 FNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLL 221
F+ + + + V WNS+ISG+ + + + MF M+ +PDG+T+ LL A
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY 281
G+ +H ++ + +S V + L+ MY +C C++ VF L W+++I G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI-RHGLESD 340
+ G E+ + F +L + DS+ VL + A + V E + ++ +E
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
+K + ++++ G L + + MP E + + ++S++S G A R +
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCL- 453
Query: 400 EKGLAPDAATFSALL-GACCHAGLVNEGREIFQRMKD 435
K L PD LL A GL E E MK+
Sbjct: 454 -KKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 489
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 12 LSNVCKSLLRAKQ---LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRS 68
L N C L ++Q +H +++ + T L+ +Y I +VF+ +
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHG 128
+ WNSMI A + + A+ LF + + ++PD+ +F V+ ACA + + VH
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE------VHR 377
Query: 129 GAVASGLGLDAICCSALVSAYSKL-------GLVHEANRVF-NGIAEPDLVLWNSLISGY 180
L + + Y+ + GL+ EA + N E D V+W+SL+S
Sbjct: 378 ADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS-- 435
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPD---GYTL 208
C +V M ++ L PD GY L
Sbjct: 436 ACRKIGNVEMAKRAAKCLKKLDPDETCGYVL 466
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 216/420 (51%), Gaps = 42/420 (10%)
Query: 172 LWNSLISGYG---CSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLH 228
LWN +I S + ++ MR PD +T LL +P L +GQ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDL----------------- 271
GLD D V + L++MYS C + SA RVF + DL
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 272 --------------VTWSALISGYSQCGEHEKVLLFFRKLIMERK-----KLDSILVATV 312
++WS LI+GY CG++++ L FR++ + + + + ++TV
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR-LMPERN 371
L++ + + G +H Y+ ++ +E D+ + +ALIDMY+KCG L VF L +++
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRIL-EKGLAPDAATFSALLGACCHAGLVNEGREIF 430
+ +Y+++I L ++G E F++F + + P++ TF +LGAC H GL+NEG+ F
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 431 QRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGN 490
+ M +EF I +HY MV L G +G ++EA + S+P D I G+LLS G+
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Query: 491 SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIE 549
+ E ++L + +P ++ V+LSN+YA GRW +VK +R +M G+ K+PG S++E
Sbjct: 386 IKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVE 445
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 154/360 (42%), Gaps = 52/360 (14%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA- 80
++ HA +L L +DPF T L+ +Y++ D+ SA VFD ++ + WNS++ A+A
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 81 ------------------------------LSQRFDNAVSLFRTML-----GADIKPDNY 105
+ ++ A+ LFR M A ++P+ +
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 106 TFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI 165
T + V+ AC L + VH + +D + +AL+ Y+K G + A RVFN +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 166 -AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV-GTRPDGYTLAGLLGGIADPSLLCI 223
++ D+ ++++I D Q+FS M P+ T G+LG L+
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 224 GQG-LHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGY 281
G+ + + G+ +V +Y R + A S+ PD++ W +L+SG
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDS---ILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
G+ + ++LI E ++S +L++ V A + V+ IRH +E
Sbjct: 381 RMLGDIKTCEGALKRLI-ELDPMNSGAYVLLSNVYAKTGRWMEVK--------CIRHEME 431
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 163/374 (43%), Gaps = 43/374 (11%)
Query: 70 YLWNSMIRAFAL---SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLV 126
+LWN +IRA S + + +S++ M + PD +TF ++ + + L + +
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 127 HGGAVASGLGLDAICCSAL-------------------------------VSAYSKLGLV 155
H + GL D ++L V+AY+K GL+
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 156 HEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG-----TRPDGYTLAG 210
+A ++F+ + E +++ W+ LI+GY + + +F M+L RP+ +T++
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 211 LLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI-SNP 269
+L L G+ +H K ++ D +G+ L+ MY++C ++ A RVF ++ S
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 270 DLVTWSALISGYSQCGEHEKVLLFFRKLIM-ERKKLDSILVATVLASIAQTANVRPGCEI 328
D+ +SA+I + G ++ F ++ + +S+ +L + + G
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 329 HGYVIRH-GLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHG 386
+I G+ ++ ++D+Y + G + MP E +++ + S++SG + G
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Query: 387 CASEAFRMFDRILE 400
R++E
Sbjct: 385 DIKTCEGALKRLIE 398
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 26/177 (14%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM-STRSVYLWNSMI 76
+L + K +HA + K H+ D T L+ +YA + A VF+ + S + V +++MI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 77 RAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
A+ D LF M +D I P++ TF ++ AC VH G + G
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC-----------VHRGLINEGK 322
Query: 136 GLDAICCSA------------LVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISG 179
+ +V Y + GL+ EA + EPD+++W SL+SG
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 219/441 (49%), Gaps = 19/441 (4%)
Query: 120 LGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISG 179
L L+ +H + GL S L+ S + L + A + I P + L+N+LIS
Sbjct: 22 LQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY-ALSILRQIPNPSVFLYNTLISS 80
Query: 180 Y-------GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA-DPSLLCIGQGLHG-- 229
A+ + Q+ SS R RP+ +T L D G+ LH
Sbjct: 81 IVSNHNSTQTHLAFSLYDQILSS-RSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHV 139
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGE--- 286
L ++ D V + LV Y+ C + A +F I PDL TW+ L++ Y+ E
Sbjct: 140 LKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDS 199
Query: 287 HEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSA 346
E+VLL F ++ + +L LVA ++ S A G H YV+++ L + V ++
Sbjct: 200 DEEVLLLFMRMQVRPNELS--LVA-LIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTS 256
Query: 347 LIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPD 406
LID+YSKCG L F VF M +R++ YN++I GL +HG E ++ ++ +GL PD
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 407 AATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLT 466
+ATF + AC H+GLV+EG +IF MK + I+ + EHY +V LLG +G LEEA
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 467 QSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWD 526
+ +P + + + L + G+ E E + L ++ V+LSNIYAG RW
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWT 436
Query: 527 DVKNLRDKMTGG-LRKMPGLS 546
DV+ R+ M + K PG+S
Sbjct: 437 DVEKTRELMKDHRVNKSPGIS 457
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 182/386 (47%), Gaps = 20/386 (5%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
CKSL KQ+HA ++ LS + +KL+ L ++T ++ A + ++ SV+L+N++
Sbjct: 19 CKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSVFLYNTL 77
Query: 76 IRAFAL---SQRFDNAVSLFRTMLGAD---IKPDNYTFACVIRACADNFDLGMLRLVHGG 129
I + S + A SL+ +L + ++P+ +T+ + +A FD R HG
Sbjct: 78 ISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASG--FDAQWHR--HGR 133
Query: 130 AVAS-------GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGC 182
A+ + + D +ALV Y+ G + EA +F I EPDL WN+L++ Y
Sbjct: 134 ALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN 193
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
S D ++ + RP+ +L L+ A+ G H K+ L + V
Sbjct: 194 SEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFV 253
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
G+ L+ +YS+C C+ A +VF +S D+ ++A+I G + G ++ + ++ LI +
Sbjct: 254 GTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGL 313
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYV-IRHGLESDVKVSSALIDMYSKCGFLHFGI 361
DS +++ + + V G +I + +G+E V+ L+D+ + G L
Sbjct: 314 VPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAE 373
Query: 362 CVFRLMPER-NIISYNSVISGLGLHG 386
+ MP + N + S + HG
Sbjct: 374 ECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 139/312 (44%), Gaps = 6/312 (1%)
Query: 23 KQLHACLLK--THLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA 80
+ LHA +LK ++ D F LV YA + A +F+++ + WN+++ A+A
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI 140
S+ D+ + + ++P+ + +I++CA+ + H + + L L+
Sbjct: 193 NSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
++L+ YSK G + A +VF+ +++ D+ +N++I G G++++ S+ G
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG 312
Query: 201 TRPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
PD T + + L+ G Q + + G++ LV + R ++ A
Sbjct: 313 LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 260 YRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFRKLI-ME-RKKLDSILVATVLASI 316
+ P+ W + + G+ E+ + + L+ +E + +L++ + A +
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGV 432
Query: 317 AQTANVRPGCEI 328
+ +V E+
Sbjct: 433 NRWTDVEKTREL 444
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/565 (26%), Positives = 268/565 (47%), Gaps = 40/565 (7%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYA--ATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
Q+H ++K+ F + L+ LY + + + +FD++ R V WN+++ +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 82 SQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL----- 135
+ A LF M + D++T + ++ +C D+ L R +HG A+ GL
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 136 --------------------------GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPD 169
DA+ + +++AY G+V A +F + E +
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
+ +N+L++G+ + +++F+ M G ++L + S + + +HG
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCS-ISNPDLV-TWSALISGYSQCGEH 287
K G + + + L+ M +RC+ M A +F SN D +++I GY++ G
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLP 501
Query: 288 EK-VLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSA 346
+K V LF R L ++ LD + + +LA G +IH Y ++ G SD+ + ++
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNS 561
Query: 347 LIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPD 406
LI MY+KC I +F M E ++IS+NS+IS L EA ++ R+ EK + PD
Sbjct: 562 LISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPD 621
Query: 407 AATFSALLGAC--CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYN 464
T + ++ A + ++ R++F MK ++I+ EHY V++LG G LEEA +
Sbjct: 622 IITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAED 681
Query: 465 LTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGR 524
S+P + ++L ALL C N+ +A+ VA+ + P + ++ SNIY+ G
Sbjct: 682 TINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGF 741
Query: 525 WDDVKNLRDKM-TGGLRKMPGLSWI 548
W + +R++M G RK P SWI
Sbjct: 742 WHRSEMIREEMRERGYRKHPAKSWI 766
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 191/448 (42%), Gaps = 43/448 (9%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFA- 80
K +HA LK + L+ Y A VF +S+ +V + ++I F+
Sbjct: 99 TKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSR 157
Query: 81 LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA--DNFDLGMLRLVHGGAVASGLGLD 138
L+ + FR ++P+ YTF ++ AC F LG+ +HG V SG
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ--IHGLIVKSGFLNS 215
Query: 139 AICCSALVSAYSKLG--LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
++L+S Y K + ++F+ I + D+ WN+++S +F M
Sbjct: 216 VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM 275
Query: 197 -RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
R+ G D +TL+ LL D S+L G+ LHG + + GL + V + L+ YS+
Sbjct: 276 NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWD 335
Query: 256 M-------------------------------DSAYRVFCSISNPDLVTWSALISGYSQC 284
M DSA +F +++ + +T++AL++G+ +
Sbjct: 336 MKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRN 395
Query: 285 GEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVS 344
G K L F ++ +L + + + + + + +IHG+ I+ G + +
Sbjct: 396 GHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQ 455
Query: 345 SALIDMYSKCGFLHFGICVFRLMPER--NIISYNSVISGLGLHGCASEAFRMFDRIL-EK 401
+AL+DM ++C + +F P + + S+I G +G +A +F R L E+
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQ 515
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREI 429
L D + + +L C G G +I
Sbjct: 516 KLFLDEVSLTLILAVCGTLGFREMGYQI 543
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 3/197 (1%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR--SVYLWNSMIRAF 79
++Q+H +K + +P T L+ + + A +FD+ + S S+I +
Sbjct: 436 SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGY 495
Query: 80 ALSQRFDNAVSLF-RTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLD 138
A + D AVSLF RT+ + D + ++ C M +H A+ +G D
Sbjct: 496 ARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 139 AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
++L+S Y+K +A ++FN + E D++ WNSLIS Y D + ++S M
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 199 VGTRPDGYTLAGLLGGI 215
+PD TL ++
Sbjct: 616 KEIKPDIITLTLVISAF 632
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 238/469 (50%), Gaps = 51/469 (10%)
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
+ +H + +G D L+ + K G + A +VF+ + +P L +N +ISGY
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG-------IADPSLLCIGQGLHGLSHKSGL 236
+ + M G + DGYTL+ +L + P LC + +H K +
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC--RLVHARIIKCDV 171
Query: 237 DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN---------------------------- 268
+ D + + LV Y + ++SA VF ++ +
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 269 ---PDLVTWSALISGYSQCGEHEK--VLLFFRKLIMERKKLDSIL--VATVLASIAQTAN 321
D+V ++A++ G+S+ GE K V ++ + M+R + A+V+ + + +
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMY---ISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
G ++H +++ G+ + +K+ S+L+DMY+KCG ++ VF M E+N+ S+ S+I G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKA 441
G +G EA +F R+ E + P+ TF L AC H+GLV++G EIF+ M+ ++++K
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 442 RPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
+ EHY +V L+G AG+L +A+ +++PE D I ALLS CN GN ELA A +L
Sbjct: 409 KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASEL 468
Query: 502 FQNNPADN--AFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSW 547
F+ N AD + LSN+YA + +WD+V +R+ M + K G SW
Sbjct: 469 FKLN-ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 192/418 (45%), Gaps = 46/418 (11%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K++HA ++KT D + KL+ L+ ++ A VFD++ ++ +N MI +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML-----RLVHGGAVASGLGL 137
+ L + M + K D YT + V++A +L RLVH + + L
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY----------------- 180
D + +ALV Y K G + A VF + + ++V S+ISGY
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 181 ------------GCSAAWDVG---MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
G S + + + M+ SM+ G P+ T A ++G + + +GQ
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
+H KSG+ + +GS L+ MY++C ++ A RVF + ++ +W+++I GY + G
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR-HGLESDVKVS 344
E+ L F ++ R + + + L++ + + V G EI + R + ++ ++
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 345 SALIDMYSKCGFLHFGICVFRLMPER-NIISYNSVISGLGLHG-------CASEAFRM 394
+ ++D+ + G L+ R MPER + + +++S LHG ASE F++
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKL 471
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 150/361 (41%), Gaps = 82/361 (22%)
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
P Y L I P+ G+ +H K+G D ++ L+ ++ +C C+ A +V
Sbjct: 33 PAKYIAGALQEHINSPAPKA-GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQV 91
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL-ASIAQTAN 321
F + P L ++ +ISGY + G +++LL +++ +K D ++ VL AS ++ +
Sbjct: 92 FDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGST 151
Query: 322 V---RPGCE-IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
+ R C +H +I+ +E D + +AL+D Y K G L VF M + N++ S
Sbjct: 152 MILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTS 211
Query: 378 VISGLGLHGCASEAFRMFDRILEK--------------------------------GLAP 405
+ISG G +A +F+ K G P
Sbjct: 212 MISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHP 271
Query: 406 DAATFSALLGAC-----------CHA------------------------GLVNEGREIF 430
+ +TF++++GAC HA G +N+ R +F
Sbjct: 272 NISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVF 331
Query: 431 QRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLP----EPVDKAILGALLSCCN 486
+M+++ N+ + + M+ G G EEA L + EP LGAL +C +
Sbjct: 332 DQMQEK-NVFS----WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSH 386
Query: 487 S 487
S
Sbjct: 387 S 387
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 212/425 (49%), Gaps = 34/425 (8%)
Query: 158 ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD 217
A ++F+ L+N LI Y + +++ + G RP +T + A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 218 PSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSAL 277
S + LH +SG +SDS + L++ Y++ + A RVF +S D+ W+A+
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 278 ISGYSQCGEHEKVLLFF----RK-------------------------LIMERKK---LD 305
I+GY + G+ + + F RK L ME+ K +
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
I V +VL + A + G + GY +G ++ V +A I+MYSKCG + +F
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 366 -LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
L +RN+ S+NS+I L HG EA +F ++L +G PDA TF LL AC H G+V
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSC 484
+G+E+F+ M++ I + EHY M+ LLG G+L+EAY+L +++P D + G LL
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 485 CNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMP 543
C+ GN E+AE ++ LF+ P + V++SNIYA + +WD V +R M + K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 544 GLSWI 548
G S+
Sbjct: 455 GYSYF 459
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 197/440 (44%), Gaps = 80/440 (18%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
KQLHA L+T + + L++ ++ A +FD +L+N +I+A+ +
Sbjct: 5 KQLHAHCLRTGVDE----TKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ ++ L+ + ++P ++TF + A A LRL+H SG D+ CC
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWN---------------------------- 174
+ L++AY+KLG + A RVF+ +++ D+ +WN
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 175 ---SLISGYGCSAAWDVGMQMFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL 230
++ISG+ + + ++MF M + +P+ T+ +L A+ L IG+ L G
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 231 SHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP-DLVTWSALISGYSQCGEHEK 289
+ ++G + +V + + MYS+C +D A R+F + N +L +W+++I + G+H++
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 290 VLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALID 349
L F +++ E +K D++ +L + +HG ++ G E
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLAC-----------VHGGMVVKGQE----------- 338
Query: 350 MYSKCGFLHFGICVFRLMPERNIIS-----YNSVISGLGLHGCASEAFRMFDRILEKGLA 404
+F+ M E + IS Y +I LG G EA +D I +
Sbjct: 339 -------------LFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEA---YDLIKTMPMK 382
Query: 405 PDAATFSALLGACCHAGLVN 424
PDA + LLGAC G V
Sbjct: 383 PDAVVWGTLLGACSFHGNVE 402
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 235/503 (46%), Gaps = 39/503 (7%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
K L +KQLH K L + L+ Y + + A +F + + WN++I
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
A A S+ A+ LF +M P+ T+ V+ + L R +HG + +G
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ +AL+ Y+K G + ++ F+ I + ++V WN+L+SGY + + + +F M
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQM 407
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+G RP YT + L L Q LH + + G + + +V S L+ Y++ + M
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 257 DSA--------------------------------YRVFCSISNPDLVTWSALISGYSQC 284
+ A ++ ++ PD V+W+ I+ S+
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRS 523
Query: 285 GEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE-SDVKV 343
HE+V+ F+ ++ + D ++L+ ++ ++ G IHG + + +D V
Sbjct: 524 DYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFV 583
Query: 344 SSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGL 403
+ LIDMY KCG + + VF E+N+I++ ++IS LG+HG EA F L G
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGF 643
Query: 404 APDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAY 463
PD +F ++L AC H G+V EG +FQ+MKD + ++ +HY V LL G L+EA
Sbjct: 644 KPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAE 702
Query: 464 NLTQSLPEPVDKAILGALLSCCN 486
+L + +P P D + L CN
Sbjct: 703 HLIREMPFPADAPVWRTFLDGCN 725
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 198/438 (45%), Gaps = 16/438 (3%)
Query: 16 CKSL-LRA-KQLHACLLKTHL-SQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLW 72
C SL +RA QLH LK L D F T L+ LY + + A VF+ M +S+ W
Sbjct: 124 CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETW 183
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N M+ + FR ++ +F V++ + DL + + +H A
Sbjct: 184 NHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATK 243
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
GL + ++L+SAY K G H A R+F D+V WN++I S +++
Sbjct: 244 KGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKL 303
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
F SM G P+ T +LG + LL G+ +HG+ K+G ++ +G+ L+ Y++
Sbjct: 304 FVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK 363
Query: 253 CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
C ++ + F I + ++V W+AL+SGY+ + LF + L M + + +T
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTF-STA 422
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERN 371
L S T ++H ++R G E + V S+L+ Y+K ++ + + +
Sbjct: 423 LKSCCVTELQ----QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
++ N V G E+ ++ + + PD +++ + AC + E E+F+
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQ----PDTVSWNIAIAACSRSDYHEEVIELFK 534
Query: 432 RMKDEFNIKARPEHYVYM 449
M RP+ Y ++
Sbjct: 535 HM---LQSNIRPDKYTFV 549
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 149/289 (51%), Gaps = 3/289 (1%)
Query: 142 CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
C+ ++S Y KLG V A +VF+ + E + V +N++I GY D +FS MR G
Sbjct: 52 CNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGY 111
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGL-DSDSHVGSLLVSMYSRCKCMDSAY 260
P+ T++GLL + + G LHGLS K GL +D+ VG+ L+ +Y R ++ A
Sbjct: 112 LPNQSTVSGLLSCASLD--VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+VF + L TW+ ++S G ++ + FFR+L+ L VL ++
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVIS 380
++ ++H + GL+ ++ V ++LI Y KCG H +F+ +I+S+N++I
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+A ++F + E G +P+ T+ ++LG L++ GR+I
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 172/390 (44%), Gaps = 38/390 (9%)
Query: 12 LSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL 71
+S++ + L +Q+H L+K L+ YA ++ + FD + +++
Sbjct: 325 VSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVC 384
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
WN+++ +A ++ +SLF ML +P YTF+ +++C + L+ +H V
Sbjct: 385 WNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIV 439
Query: 132 ASGLGLDAICCSALVSA--------------------------------YSKLGLVHEAN 159
G + S+L+ + YS+ G HE+
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESV 499
Query: 160 RVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPS 219
++ + + +PD V WN I+ S + +++F M RPD YT +L +
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLC 559
Query: 220 LLCIGQGLHGLSHKSGLD-SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALI 278
L +G +HGL K+ +D+ V ++L+ MY +C + S +VF +L+TW+ALI
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALI 619
Query: 279 SGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
S G ++ L F++ + K D + ++L + V+ G + + +G+E
Sbjct: 620 SCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVE 679
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
++ +D+ ++ G+L + R MP
Sbjct: 680 PEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 123/305 (40%), Gaps = 17/305 (5%)
Query: 2 LTQIQWLHSE------------LSNVCKSLLRAKQLHACLLKTHLSQDPFYATKL---VR 46
+T++Q LHS LS++ +S + + ++ LL + P L
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 47 LYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYT 106
+Y+ + + + + WN I A + S + + LF+ ML ++I+PD YT
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 107 FACVIRACADNFDLGMLRLVHGGAVASGLGL-DAICCSALVSAYSKLGLVHEANRVFNGI 165
F ++ C+ DL + +HG + D C+ L+ Y K G + +VF
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
E +L+ W +LIS G ++ F +G +PD + +L ++ G
Sbjct: 608 REKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP-DLVTWSALISGYSQC 284
GL G++ + V + +R + A + + P D W + G ++
Sbjct: 668 GLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRF 727
Query: 285 GEHEK 289
E ++
Sbjct: 728 AEEQR 732
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Query: 225 QGLHGLSHK--SGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYS 282
+ LH LS S L +V + ++S+Y + + A +VF + + V+++ +I GYS
Sbjct: 32 KALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYS 91
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGL-ESDV 341
+ G+ +K F ++ + V+ +L+ + +VR G ++HG +++GL +D
Sbjct: 92 KYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS--CASLDVRAGTQLHGLSLKYGLFMADA 149
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEK 401
V + L+ +Y + L VF MP +++ ++N ++S LG G E F ++
Sbjct: 150 FVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRM 209
Query: 402 GLAPDAATFSALL-GACC 418
G + ++F +L G C
Sbjct: 210 GASLTESSFLGVLKGVSC 227
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 223/480 (46%), Gaps = 53/480 (11%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE----ANRVFNGIAEPDLVLWNSLIS 178
L +H + SG D + + ++ + L H A+++FN + + + WN++I
Sbjct: 39 LSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 179 GYGCSAAWD--VGMQMFSSMRLVG-TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
G+ S + + +F M P+ +T +L A + G+ +HGL+ K G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSA----YR------------------------------ 261
D V S LV MY C M A Y+
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 262 -----------VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
+F + +V+W+ +ISGYS G + + FR++ + + + +
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
+VL +I++ ++ G +H Y G+ D + SALIDMYSKCG + I VF +P
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
N+I+++++I+G +HG A +A F ++ + G+ P + LL AC H GLV EGR F
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 431 QRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGN 490
+M ++ R EHY MV LLG +G L+EA ++P D I ALL C GN
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 491 SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
E+ + VA L P D+ V LSN+YA G W +V +R +M +RK PG S I+
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 221/518 (42%), Gaps = 103/518 (19%)
Query: 14 NVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATN----DINSAYHVFDKMSTRSV 69
N C+++ Q+HA +K+ +D A +++R A ++ D++ A+ +F++M R+
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 70 YLWNSMIRAFALSQRFDN--AVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLV 126
+ WN++IR F+ S A++LF M+ + ++P+ +TF V++ACA + + +
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 127 HGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF-NGIAEPDLVL------------- 172
HG A+ G G D S LV Y G + +A +F I E D+V+
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 173 -------------------------------WNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
WN++ISGY + + +++F M+
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
RP+ TL +L I+ L +G+ LH + SG+ D +GS L+ MYS+C ++ A
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
VF + +++TWSA+I+G++ G+ + F K+ + A
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM--------------------RQAG 370
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKC---GFLHFGICVFRLMP-----ERNII 373
VRP SDV A I++ + C G + G F M E I
Sbjct: 371 VRP--------------SDV----AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIE 412
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
Y ++ LG G EA IL + PD + ALLGAC G V G+ + +
Sbjct: 413 HYGCMVDLLGRSGLLDEAEEF---ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
Query: 434 KDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE 471
D + YV + + S G E + + E
Sbjct: 470 MD--MVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 218/417 (52%), Gaps = 19/417 (4%)
Query: 150 SKLGLVHEANRVFNGIAEPDLVLWNSLISG--YGCSAAWDVGMQMFSSMRLVGTRPDGYT 207
S V+ A RVF+ I +WN+LI + S + M + + PD +T
Sbjct: 94 SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHT 153
Query: 208 LAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
+L A G+ +H K G D +V + L+ +Y C C+D A +VF +
Sbjct: 154 FPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP 213
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK-KLDSILVATVLASIAQTANVRPGC 326
LV+W+++I + GE++ L FR+ M+R + D + +VL++ A ++ G
Sbjct: 214 ERSLVSWNSMIDALVRFGEYDSALQLFRE--MQRSFEPDGYTMQSVLSACAGLGSLSLGT 271
Query: 327 EIHGYVIRH---GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLG 383
H +++R + DV V ++LI+MY KCG L VF+ M +R++ S+N++I G
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFA 331
Query: 384 LHGCASEAFRMFDRILEK--GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKA 441
HG A EA FDR+++K + P++ TF LL AC H G VN+GR+ F M ++ I+
Sbjct: 332 THGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEP 391
Query: 442 RPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL-SCCNSCGNSELAETVAQK 500
EHY +V L+ AG + EA ++ S+P D I +LL +CC + EL+E +A+
Sbjct: 392 ALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARN 451
Query: 501 LF---QNNPADN----AFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
+ ++N + N V+LS +YA RW+DV +R M+ G+RK PG S IE
Sbjct: 452 IIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIE 508
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 224/442 (50%), Gaps = 15/442 (3%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLV----HEANRVFNGIAEPDLVLWNSLIS 178
++ H + GL + S L++A+ L + H A+ +F+ I P+ +++++I
Sbjct: 27 IKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIR 86
Query: 179 GYGCSAAWDVGMQMFSSM---RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
S+ +G++ F M P T L+ +G+ +H K+G
Sbjct: 87 ICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNG 146
Query: 236 LD-SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFF 294
+ SDSHV + ++ +Y K + A +VF I PD+V W L++GY +CG + L F
Sbjct: 147 VFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVF 206
Query: 295 RKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG-LESDVKVSSALIDMYSK 353
R+++++ + D V T L + AQ + G IH +V + +ESDV V +AL+DMY+K
Sbjct: 207 REMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAK 266
Query: 354 CGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRI-LEKGLAPDAATFSA 412
CG + + VF+ + RN+ S+ ++I G +G A +A +R+ E G+ PD+
Sbjct: 267 CGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLG 326
Query: 413 LLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEP 472
+L AC H G + EGR + + M+ + I + EHY +V L+ AG L++A NL + +P
Sbjct: 327 VLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMK 386
Query: 473 VDKAILGALLSCCNSCGNSELAETVAQKLFQ----NNPADNAFKVMLSNIYAGDGRWDDV 528
++ GALL+ C + N EL E + L N + A V LSNIY R +
Sbjct: 387 PLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEA 446
Query: 529 KNLRDKMTG-GLRKMPGLSWIE 549
+R + G+RK PG S +E
Sbjct: 447 SKVRGMIEQRGVRKTPGWSVLE 468
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 8/275 (2%)
Query: 23 KQLHACLLKTHLS-QDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
KQ+H ++K + D T ++R+Y + A VFD++ V W+ ++ +
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA-VASGLGLDAI 140
+ +FR ML ++PD ++ + ACA L + +H S + D
Sbjct: 196 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 255
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM-RLV 199
+ALV Y+K G + A VF + ++ W +LI GY M + R
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 315
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQG-LHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
G +PD L G+L A L G+ L + + + S +V + R +D
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDD 375
Query: 259 AYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLL 292
A + + P W AL++G C H+ V L
Sbjct: 376 ALNLIEKMPMKPLASVWGALLNG---CRTHKNVEL 407
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 234/475 (49%), Gaps = 45/475 (9%)
Query: 110 VIRACADNFDLGML-RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP 168
++RACA +L +L+H ++ G+ D + S+L+S Y K G V A +VF+ + E
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 169 DLVLWNSLI--------------------------------SGYGCSAAWDVGMQMFSSM 196
++ WN++I GYG + ++F M
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM 170
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
+++ +LG + + + + + ++ V SL++S Y R +
Sbjct: 171 PFELKNVKAWSV--MLGVYVNNRKMEDARKFF----EDIPEKNAFVWSLMMSGYFRIGDV 224
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
A +F + DLV W+ LI+GY+Q G + + F + E + D++ V+++L++
Sbjct: 225 HEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSAC 284
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
AQ+ + G E+H + G+E + VS+ALIDMY+KCG L VF + R++ N
Sbjct: 285 AQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCN 344
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
S+IS L +HG EA MF + L PD TF A+L AC H G + EG +IF MK +
Sbjct: 345 SMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ 404
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
++K +H+ ++ LLG +G+L+EAY L + + + +LGALL C ++E+AE
Sbjct: 405 -DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQ 463
Query: 497 VAQKLFQNNPADNAFK----VMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLS 546
V + + N++ +SN+YA RW + LR +M GL K PGLS
Sbjct: 464 VMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 35 SQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRT 94
++ F + ++ Y D++ A +F ++ R + +WN++I +A + D+A+ F
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 95 MLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGL 154
M G +PD T + ++ ACA + L + R VH G+ L+ +AL+ Y+K G
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 155 VHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG 214
+ A VF I+ + NS+IS ++MFS+M + +PD T +L
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 215 IADPSLLCIGQGLHGLSHKSGLDSDSHVGSL--LVSMYSRCKCMDSAYRV 262
L +GL S D +V L+ + R + AYR+
Sbjct: 385 CVHGGFLM--EGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRL 432
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+++H+ + + + F + L+ +YA D+ +A VF+ +S RSV NSMI A+
Sbjct: 294 REVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIH 353
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ A+ +F TM D+KPD TF V+ AC VHGG + GL +
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTAC-----------VHGGFLMEGLKI 397
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 230/463 (49%), Gaps = 10/463 (2%)
Query: 12 LSNVCKSLLRAKQL------HACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS 65
LSNV KS A L HA +K L F T LV +Y + A VFD++
Sbjct: 217 LSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV 276
Query: 66 TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLR 124
R + +W +MI A ++R A+ LFRTM+ + I P++ ++ D L + +
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 125 LVHGGAVASGLGLD-AICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCS 183
VH + S ++ S L+ Y K G + RVF G + + + W +L+SGY +
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAAN 396
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS-GLDSDSHV 242
+D ++ M+ G RPD T+A +L A+ + G+ +H + K+ L + S V
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
SL+V MYS+C + R+F + ++ W+A+I Y + + + FR +++ +
Sbjct: 457 TSLMV-MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH 515
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
+ DS+ + VL + ++ G E+HG++++ ES VS+ +I MY KCG L
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANF 575
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
F + + +++ ++I G + +A F++++ +G P+ TF+A+L C AG
Sbjct: 576 SFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGF 635
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNL 465
V+E F M +N++ EHY +++LL G +EEA L
Sbjct: 636 VDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 224/454 (49%), Gaps = 13/454 (2%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KSLL KQ+H + L + F TKLV +Y A + A VFD+ ++ +VY WN+++
Sbjct: 125 KSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALL 184
Query: 77 RAFALS--QRFDNAVSLFRTM--LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
R +S +R+ + +S F M LG D+ + Y+ + V ++ A L H A+
Sbjct: 185 RGTVISGKKRYQDVLSTFTEMRELGVDL--NVYSLSNVFKSFAGASALRQGLKTHALAIK 242
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
+GL ++LV Y K G V A RVF+ I E D+V+W ++I+G + + +
Sbjct: 243 NGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGL 302
Query: 193 FSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS-GLDSDSHVGSLLVSMY 250
F +M P+ L +L + D L +G+ +H KS V S L+ +Y
Sbjct: 303 FRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLY 362
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
+C M S RVF + ++W+AL+SGY+ G ++ L + E + D + +A
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
TVL A+ ++ G EIH Y +++ +V + ++L+ MYSKCG + I +F + +R
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR 482
Query: 371 NIISYNSVISGLGLHGCASEA-FRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
N+ ++ ++I + C A +F +L PD+ T +L C + G+E+
Sbjct: 483 NVKAWTAMIDCY-VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Query: 430 F-QRMKDEFNIKARPEHYVYMVKLLGSAGELEEA 462
+K EF ++ P ++K+ G G+L A
Sbjct: 542 HGHILKKEF--ESIPFVSARIIKMYGKCGDLRSA 573
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 6/371 (1%)
Query: 64 MSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGML 123
+ +++ Y+ + I+ FA + A+++ + I + TF+ ++ AC L
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY--- 180
+ VH +GL + + LV Y+ G V +A +VF+ ++ WN+L+ G
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
G DV + F+ MR +G + Y+L+ + A S L G H L+ K+GL +
Sbjct: 191 GKKRYQDV-LSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
+ + LV MY +C + A RVF I D+V W A+I+G + + L FR +I E
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE 309
Query: 301 RKKL-DSILVATVLASIAQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSKCGFLH 358
K +S+++ T+L + ++ G E+H +V++ V S LID+Y KCG +
Sbjct: 310 EKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMA 369
Query: 359 FGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
G VF +RN IS+ +++SG +G +A R + ++G PD T + +L C
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA 429
Query: 419 HAGLVNEGREI 429
+ +G+EI
Sbjct: 430 ELRAIKQGKEI 440
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 221/442 (50%), Gaps = 15/442 (3%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVSAYSKLGLV----HEANRVFNGIAEPDLVLWNSLIS 178
++ H + GL + S L++A+ L + H A+ +F+ I P+ +++++I
Sbjct: 27 IKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIR 86
Query: 179 GYGCSAAWDVGMQMFSSM---RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
S+ +G++ F M P T L+ +G+ +H K+G
Sbjct: 87 ICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNG 146
Query: 236 LD-SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFF 294
+ SD HV + ++ +Y K + A +VF I PD+V W L++GY +CG + L F
Sbjct: 147 VFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVF 206
Query: 295 RKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR-HGLESDVKVSSALIDMYSK 353
+++++ + D V T L + AQ + G IH +V + +ESDV V +AL+DMY+K
Sbjct: 207 KEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAK 266
Query: 354 CGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRI-LEKGLAPDAATFSA 412
CG + + VF + RN+ S+ ++I G +G A +A DRI E G+ PD+
Sbjct: 267 CGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLG 326
Query: 413 LLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEP 472
+L AC H G + EGR + + M+ + I + EHY +V L+ AG L++A +L + +P
Sbjct: 327 VLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMK 386
Query: 473 VDKAILGALLSCCNSCGNSELAETVAQKLFQ----NNPADNAFKVMLSNIYAGDGRWDDV 528
++ GALL+ C + N EL E Q L N + A V LSNIY R +
Sbjct: 387 PLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEA 446
Query: 529 KNLRDKMTG-GLRKMPGLSWIE 549
+R + G+RK PG S +E
Sbjct: 447 FKVRGMIEQRGIRKTPGWSLLE 468
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 14/278 (5%)
Query: 23 KQLHACLLKTHLS-QDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
KQ+H ++K + D T ++R+Y + A VFD++ V W+ ++ +
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG-LGLDAI 140
+ +F+ ML I+PD ++ + ACA L + +H + D
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM---- 196
+ALV Y+K G + A VF + ++ W +LI GY AA+ + + +
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGY---AAYGYAKKATTCLDRIE 312
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQG-LHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
R G +PD L G+L A L G+ L + + G+ S +V + R
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 256 MDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLL 292
+D A + + P W AL++G C H+ V L
Sbjct: 373 LDDALDLIEKMPMKPLASVWGALLNG---CRTHKNVEL 407
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 18 SLLRAKQLHACLLKTH-LSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+L + K +H + K + D F T LV +YA I +A VF+K++ R+V+ W ++I
Sbjct: 233 ALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALI 292
Query: 77 RAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
+A A + + D IKPD+ V+ ACA HGG + G
Sbjct: 293 GGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACA-----------HGGFLEEG 340
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 246/515 (47%), Gaps = 43/515 (8%)
Query: 44 LVRLYAATNDINSAYHVFDKMST----RSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
L+ Y ++A + KM T V+ W +MI + A+ +FR M A
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
+ P+ T + AC+ + VH AV G D + ++LV YSK G + +A
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 160 RVFNGIAEPDLVLWNSLISGYGCSAAW-DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADP 218
+VF+ + D+ WNS+I+GY C A + ++F+ M+ RP+ T ++ G
Sbjct: 408 KVFDSVKNKDVYTWNSMITGY-CQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI-- 464
Query: 219 SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALI 278
K+G + ++ + ++ R + R + TW+ +I
Sbjct: 465 --------------KNGDEGEA------MDLFQRMEKDGKVQR--------NTATWNLII 496
Query: 279 SGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
+GY Q G+ ++ L FRK+ R +S+ + ++L + A + EIHG V+R L+
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLD 556
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRI 398
+ V +AL D Y+K G + + +F M ++II++NS+I G LHG A +F+++
Sbjct: 557 AIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Query: 399 LEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGE 458
+G+ P+ T S+++ A G V+EG+++F + ++++I EH MV L G A
Sbjct: 617 KTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANR 676
Query: 459 LEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNI 518
LEEA Q + + I + L+ C G+ ++A A+ LF P + A + ++S I
Sbjct: 677 LEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQI 736
Query: 519 YAGDGR----WDDVKNLRDKMTGGLRKMPGLSWIE 549
YA + + K RD + L+K G SWIE
Sbjct: 737 YALGAKLGRSLEGNKPRRDNL---LKKPLGQSWIE 768
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 193/468 (41%), Gaps = 110/468 (23%)
Query: 37 DPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTML 96
D F TKL+ +YA I A VFD M R+++ W++MI A++ R+ LFR M+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 97 GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVH 156
+ PD++ F +++ CA+ D+ +++H + G+ +++++ Y+K G +
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 157 EANRVFNGIAEPDLVLWNS-----------------------------------LISGYG 181
A + F + E D++ WNS LI GY
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 182 ----CSAAWDVGMQM-------------------------------FSSMRLVGTRPDGY 206
C AA D+ +M F M L G P+
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 207 TLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI 266
T+ + + ++ G +H ++ K G D VG+ LV MYS+C ++ A +VF S+
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 267 SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGC 326
N D+ TW+++I+GY Q G K F ++ Q AN+RP
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRM--------------------QDANLRP-- 451
Query: 327 EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-----ERNIISYNSVISG 381
++ + +I Y K G + +F+ M +RN ++N +I+G
Sbjct: 452 -------------NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG 498
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
+G EA +F ++ P++ T +LL AC + REI
Sbjct: 499 YIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREI 546
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 6/272 (2%)
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGL--DSDSHVGSLLVSMYSRCKCMD 257
G++ T LL D + +G+ LH + GL + D V + L+SMY++C C+
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIA 132
Query: 258 SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
A +VF S+ +L TWSA+I YS+ +V FR ++ + D L +L A
Sbjct: 133 DARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCA 192
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
+V G IH VI+ G+ S ++VS++++ +Y+KCG L F FR M ER++I++NS
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
V+ +G EA + + ++G++P T++ L+G G + ++ Q+M + F
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETF 311
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
I A + M+ L G +A ++ + +
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 161/389 (41%), Gaps = 66/389 (16%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
K + + ++H+ +K D LV +Y+ + A VFD + + VY WNSMI
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMI 425
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + A LF M A+++P+ T+
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITW----------------------------- 456
Query: 137 LDAICCSALVSAYSKLGLVHEANRVF-----NGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
+ ++S Y K G EA +F +G + + WN +I+GY + D ++
Sbjct: 457 ------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
+F M+ P+ T+ LL A+ + + +HG + LD+ V + L Y+
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIME-----RKKLDS 306
+ ++ + +F + D++TW++LI GY G + L F ++ + R L S
Sbjct: 571 KSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 307 ILVATVLASIAQTANVRPGCEI-----HGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
I++A L NV G ++ + Y I LE SA++ +Y + L +
Sbjct: 631 IILAHGL-----MGNVDEGKKVFYSIANDYHIIPALEH----CSAMVYLYGRANRLEEAL 681
Query: 362 CVFRLMPERNIIS----YNSVISGLGLHG 386
+ + E NI S + S ++G +HG
Sbjct: 682 ---QFIQEMNIQSETPIWESFLTGCRIHG 707
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 128/299 (42%), Gaps = 62/299 (20%)
Query: 162 FNGIAEPDLVL-------------------------------WNSLISGYGCSAAWDVGM 190
F EPD+ + W+++I Y W
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
++F M G PD + +L G A+ + G+ +H + K G+ S V + ++++Y
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 251 SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVA 310
++C +D A + F + D++ W++++ Y Q G+HE+ + ++ ME++ + LV
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKE--MEKEGISPGLV- 283
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
T N+ G GY + + A +D+ K FGI
Sbjct: 284 --------TWNILIG----GY-------NQLGKCDAAMDLMQK--METFGITA------- 315
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREI 429
++ ++ ++ISGL +G +A MF ++ G+ P+A T + + AC ++N+G E+
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 16 CKSLLRAK---QLHACLLKTHLSQDPFYATK--LVRLYAATNDINSAYHVFDKMSTRSVY 70
C +LL AK ++H C+L+ +L D +A K L YA + DI + +F M T+ +
Sbjct: 534 CANLLGAKMVREIHGCVLRRNL--DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDII 591
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRA--CADNFDLGMLRLVHG 128
WNS+I + L + A++LF M I P+ T + +I A N D G ++ +
Sbjct: 592 TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK-KVFYS 650
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI-AEPDLVLWNSLISGYGCSAAWD 187
A + CSA+V Y + + EA + + + + +W S ++ GC D
Sbjct: 651 IANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLT--GCRIHGD 708
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
+ M + ++ L P+ ++ I
Sbjct: 709 IDMAIHAAENLFSLEPENTATESIVSQI 736
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 230/464 (49%), Gaps = 48/464 (10%)
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPD 169
VI C DN G L + C + SKL + VF PD
Sbjct: 32 VINGCHDNSLFGKL-------------IGHYCSKPSTESSSKLAHL----LVFPRFGHPD 74
Query: 170 LVLWNSLISGYGCSAAWDVGMQMF------SSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
L+N+L+ CS D +++F SS+ + R + L G A S L +
Sbjct: 75 KFLFNTLLK---CSKPED-SIRIFANYASKSSLLYLNERTFVFVL-GACARSASSSALRV 129
Query: 224 GQGLHGLSHKSGLDSDSH-VGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY- 281
G+ +HG+ K G +S +G+ L+ Y++ + A +VF + VTW+A+I GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 282 --SQCGEH--EKVLLFFRKLI---MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
G H K ++ FR+ + D+ +V VL++I+QT + G +HGY+ +
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVC-VLSAISQTGLLEIGSLVHGYIEK 248
Query: 335 HGL--ESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAF 392
G E DV + +AL+DMYSKCG L+ VF LM +N+ ++ S+ +GL L+G +E
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 393 RMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKL 452
+ +R+ E G+ P+ TF++LL A H GLV EG E+F+ MK F + EHY +V L
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 453 LGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFK 512
LG AG ++EAY ++P D +L +L + C+ G + + E + + L + D
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 513 -------VMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWI 548
V LSN+ A G+W +V+ LR +M ++ PG S++
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 209/493 (42%), Gaps = 75/493 (15%)
Query: 10 SELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYH-----VFDKM 64
S L K+L++AKQ+HA L+ + + KL+ Y + S+ VF +
Sbjct: 12 SLLQQNSKTLIQAKQIHAQLVINGCHDNSLFG-KLIGHYCSKPSTESSSKLAHLLVFPRF 70
Query: 65 STRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD--IKPDNYTFACVIRACADNFDLGM 122
+L+N++++ + ++++ +F + + TF V+ ACA +
Sbjct: 71 GHPDKFLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSA 126
Query: 123 L---RLVHGGAVASGLGLDA-ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLIS 178
L R+VHG G ++ + + L+ Y+K G + A +VF+ + E V WN++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 179 GYGCSAAWDVGMQMFSSMRLV--------GTRPDGYTLAGLLGGIADPSLLCIGQGLHGL 230
GY CS +M L G RP T+ +L I+ LL IG +HG
Sbjct: 187 GY-CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 231 SHKSGL--DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHE 288
K G + D +G+ LV MYS+C C+++A+ VF + ++ TW+++ +G + G
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 289 KVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALI 348
+ +L +A++ G++ + ++L+
Sbjct: 306 E-------------------TPNLLNRMAES----------------GIKPNEITFTSLL 330
Query: 349 DMYSKCGFLHFGICVFRLMPER-----NIISYNSVISGLGLHGCASEAFRMFDRILEKGL 403
Y G + GI +F+ M R I Y ++ LG G EA++ IL +
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQF---ILAMPI 387
Query: 404 APDAATFSALLGACCHAGLVNEGREIFQRM-----KDEFNIKARPEHYVYMVKLLGSAGE 458
PDA +L AC G G EI + + +DE + E YV + +L G+
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGK 447
Query: 459 LEEAYNLTQSLPE 471
E L + + E
Sbjct: 448 WVEVEKLRKEMKE 460
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 197/396 (49%), Gaps = 6/396 (1%)
Query: 160 RVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP-DGYTLAGLLGGIADP 218
RVF+ P L N++I + S G ++F S+R + P + + + L
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 219 SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALI 278
L G +HG G SDS + + L+ +YS C+ A +VF I D V+W+ L
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 279 SGYSQCGEHEKVLLFFRKLIMERK---KLDSILVATVLASIAQTANVRPGCEIHGYVIRH 335
S Y + VL+ F K+ + K D + L + A + G ++H ++ +
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 336 GLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF 395
GL + +S+ L+ MYS+CG + VF M ERN++S+ ++ISGL ++G EA F
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 396 DRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD-EFNIKARPEHYVYMVKLLG 454
+ +L+ G++P+ T + LL AC H+GLV EG F RM+ EF IK HY +V LLG
Sbjct: 307 NEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLG 366
Query: 455 SAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVM 514
A L++AY+L +S+ D I LL C G+ EL E V L + + V+
Sbjct: 367 RARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVL 426
Query: 515 LSNIYAGDGRWDDVKNLRDKMTGG-LRKMPGLSWIE 549
L N Y+ G+W+ V LR M + PG S IE
Sbjct: 427 LLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIE 462
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 57/467 (12%)
Query: 20 LRAKQLHACLLKTHL--SQDPF--YATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
L +Q+HA LL+T L + D F + ++L L DIN + VF + ++ N+M
Sbjct: 25 LHLRQIHALLLRTSLIRNSDVFHHFLSRLA-LSLIPRDINYSCRVFSQRLNPTLSHCNTM 83
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDN-YTFACVIRACADNFDLGMLRLVHGGAVASG 134
IRAF+LSQ LFR++ P N + + ++ C + DL +HG + G
Sbjct: 84 IRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDG 143
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
D++ + L+ YS +A +VF+ I + D V WN L S Y + + +F
Sbjct: 144 FLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFD 203
Query: 195 SMR--LVG-TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
M+ + G +PDG T L A+ L G+ +H ++GL ++ + LVSMYS
Sbjct: 204 KMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYS 263
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
RC MD AY+VF + ++V+W+ALISG + G ++ + F ++
Sbjct: 264 RCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM-------------- 309
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP--- 368
++ G+ + + + L+ S G + G+ F M
Sbjct: 310 ---------------------LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGE 348
Query: 369 ---ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+ N+ Y V+ LG +A+ + I + PD+ + LLGAC G V
Sbjct: 349 FKIKPNLHHYGCVVDLLGRARLLDKAYSL---IKSMEMKPDSTIWRTLLGACRVHGDVEL 405
Query: 426 GREIFQRMKDEFNIKARPE-HYVYMVKLLGSAGELEEAYNLTQSLPE 471
G + + +KA YV ++ + G+ E+ L + E
Sbjct: 406 GERVISHL---IELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKE 449
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 6/266 (2%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
LL Q+H + D T L+ LY+ + A VFD++ R WN +
Sbjct: 129 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 188
Query: 79 FALSQRFDNAVSLFRTM---LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
+ ++R + + LF M + +KPD T ++ACA+ L + VH +GL
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
+ LVS YS+ G + +A +VF G+ E ++V W +LISG + ++ F+
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHG--LSHKSGLDSDSHVGSLLVSMYSRC 253
M G P+ TL GLL + L+ G S + + + H +V + R
Sbjct: 309 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 368
Query: 254 KCMDSAYRVFCSIS-NPDLVTWSALI 278
+ +D AY + S+ PD W L+
Sbjct: 369 RLLDKAYSLIKSMEMKPDSTIWRTLL 394
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 196/413 (47%), Gaps = 35/413 (8%)
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP-DGYTLAGLLGGIADPSLLCIGQGLH 228
L+ +S Y + + +F M P D + + L A +G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHE 288
S KS S+ VG L+ MY +C + A ++F I + V W+A+IS Y+ CG+ +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 289 ---------------------------------KVLLFFRKLIMERKKLDSILVATVLAS 315
+ + F+RK+I R K + I + ++++
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
+ R EIH Y R+ +E ++ S L++ Y +CG + + VF M +R+++++
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
+S+IS LHG A A + F + + PD F +L AC HAGL +E F+RM+
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 436 EFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAE 495
++ ++A +HY +V +L G EEAY + Q++PE GALL C + G ELAE
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 496 TVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSW 547
A++L P + A V+L IY GR ++ + LR KM G++ PG SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 47/316 (14%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI-------- 76
+HA +K++ +PF L+ +Y ++ A +FD++ R+ +WN+MI
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 77 --RAFALSQRFD-----------------------NAVSLFRTMLGADIKPDNYTFACVI 111
A L + D A+ +R M+ KP+ T ++
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 112 RACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLV 171
AC+ +++ +H A + + S LV AY + G + VF+ + + D+V
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 172 LWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL-----GGIADPSLLCIG-- 224
W+SLIS Y + ++ F M L PD +L G+AD +L+
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI-SNPDLVTWSALISGYSQ 283
QG +GL S H S LV + SR + AY+V ++ P TW AL+
Sbjct: 310 QGDYGLR-----ASKDHY-SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 284 CGEHEKVLLFFRKLIM 299
GE E + R+L+M
Sbjct: 364 YGEIELAEIAARELLM 379
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 178/442 (40%), Gaps = 93/442 (21%)
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKP-DNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
+ ++A + A++LF M + P D + F+ +++CA F + VH +V S
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
+ AL+ Y K V A ++F+ I + + V+WN++IS Y ++++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 195 SMR--------------LVGT-------------------RPDGYTLAGLLGGIADPSLL 221
+M LVGT +P+ TL L+ +
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 222 CIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGY 281
+ + +H + ++ ++ + S LV Y RC + VF S+ + D+V WS+LIS Y
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVL-----ASIAQTANVRPGCEIHGYVIR-- 334
+ G+ E L F+++ + + D I VL A +A A V Y R
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV--------YFKRMQ 310
Query: 335 --HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAF 392
+GL + S L+D+ S+ G V + MPE+
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK---------------------- 348
Query: 393 RMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQR---MKDEFNIKARPEHYVYM 449
P A T+ ALLGAC + G + E EI R M + N P +YV +
Sbjct: 349 ------------PTAKTWGALLGACRNYGEI-ELAEIAARELLMVEPEN----PANYVLL 391
Query: 450 VKLLGSAGELEEAYNLTQSLPE 471
K+ S G EEA L + E
Sbjct: 392 GKIYMSVGRQEEAERLRLKMKE 413
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
K++H+ + + P + LV Y I VFD M R V W+S+I A+AL
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAIC- 141
++A+ F+ M A + PD+ F V++AC+ + L LV+ + GL A
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACS-HAGLADEALVYFKRMQGDYGLRASKD 320
Query: 142 -CSALVSAYSKLGLVHEANRVFNGIAE-PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
S LV S++G EA +V + E P W +L+ C ++ + ++ L+
Sbjct: 321 HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLG--ACRNYGEIELAEIAARELL 378
Query: 200 GTRPDGYTLAGLLGGI 215
P+ LLG I
Sbjct: 379 MVEPENPANYVLLGKI 394
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 221/438 (50%), Gaps = 36/438 (8%)
Query: 147 SAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGY 206
SA S G V A + + +++P WN +I G+ S + + ++ M G PD
Sbjct: 50 SALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHM 109
Query: 207 TLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY-------SRCKCMD-- 257
T L+ + S +G LH KSGL+ D + + L+ MY S K D
Sbjct: 110 TYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEM 169
Query: 258 ----------------------SAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFR 295
SA VF +S D+VTWS++I GY + GE+ K L F
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 296 KLI-MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKC 354
+++ M K + + + +V+ + A + G +H Y++ L V + ++LIDMY+KC
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC 289
Query: 355 GFLHFGICVFRL--MPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSA 412
G + VF + E + + +N++I GL HG E+ ++F ++ E + PD TF
Sbjct: 290 GSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLC 349
Query: 413 LLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEP 472
LL AC H GLV E F+ +K E + + EHY MV +L AG +++A++ +P
Sbjct: 350 LLAACSHGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
Query: 473 VDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLR 532
++LGALL+ C + GN ELAETV +KL + P ++ V L+N+YA + ++ +++R
Sbjct: 409 PTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMR 468
Query: 533 DKM-TGGLRKMPGLSWIE 549
+ M G++K+ G S ++
Sbjct: 469 EAMEKKGVKKIAGHSILD 486
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 182/414 (43%), Gaps = 40/414 (9%)
Query: 10 SELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYA--ATNDINSAYHVFDKMSTR 67
S L + CKS+ ++H L+ LS++ + ++ + A ++ D++ AY K+S
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
Y WN +IR F+ S+ + ++S++ ML + PD+ T+ ++++ + + + +H
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 128 GGAVASGLGLDAICCSALV-------------------------------SAYSKLGLVH 156
V SGL D C+ L+ AY+K G V
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 157 EANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS-MRLVGTRPDGYTLAGLLGGI 215
A VF+ ++E D+V W+S+I GY ++ +++F MR+ ++ + T+ ++
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 216 ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF--CSISNPDLVT 273
A L G+ +H L + + L+ MY++C + A+ VF S+ D +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
W+A+I G + G + L F K+ + D I +LA+ + V+ +
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGC 387
G E + + ++D+ S+ G + MP I + G L+GC
Sbjct: 372 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP----IKPTGSMLGALLNGC 421
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 214/412 (51%), Gaps = 15/412 (3%)
Query: 148 AYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT------ 201
A S G + A ++F I +P WN++I G+ S+ + + SM +
Sbjct: 46 AISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAIC 105
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
R D T + L A LH ++ GL +DS + + L+ YS+ + SAY+
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
+F + D+ +W+ALI+G + + ++++ E + + V L + + +
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 322 VRPGCEI-HGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF-RLMPERNIISYNSVI 379
V+ G I HGY +V VS+A IDMYSKCGF+ VF + +++++++N++I
Sbjct: 226 VKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
+G +HG A A +FD++ + G+ PD ++ A L AC HAGLV G +F M + +
Sbjct: 281 TGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GV 339
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
+ +HY +V LL AG L EA+++ S+ D + +LL + E+AE ++
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASR 399
Query: 500 KLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWIEG 550
++ + ++ V+LSN+YA GRW DV +RD M + ++K+PGLS+IE
Sbjct: 400 EIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEA 451
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 168/367 (45%), Gaps = 18/367 (4%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAAT--NDINSAYHVFDKMSTRSVYLWN 73
C S + KQL + L Q F ++L+ A + D++ A +F + WN
Sbjct: 13 CVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWN 72
Query: 74 SMIRAFALSQRFDNAVSLFRTMLG------ADIKPDNYTFACVIRACADNFDLGMLRLVH 127
++IR FA S A S +R+ML A + D T + ++ACA + +H
Sbjct: 73 AIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLH 132
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWD 187
GL D++ C+ L+ AYSK G + A ++F+ + D+ WN+LI+G
Sbjct: 133 CQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRAS 192
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL-HGLSHKSGLDSDSHVGSLL 246
M+++ M G R T+ LG + + G+ + HG S+ + + V +
Sbjct: 193 EAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAA 247
Query: 247 VSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
+ MYS+C +D AY+VF + +VTW+ +I+G++ GE + L F KL K D
Sbjct: 248 IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPD 307
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL---HFGIC 362
+ L + V G + + G+E ++K ++D+ S+ G L H IC
Sbjct: 308 DVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIIC 367
Query: 363 VFRLMPE 369
++P+
Sbjct: 368 SMSMIPD 374
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 8/258 (3%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
QLH + + LS D T L+ Y+ D+ SAY +FD+M R V WN++I
Sbjct: 130 QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCS 143
R A+ L++ M I+ T + AC+ LG ++ G + G D + S
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACS---HLGDVK--EGENIFHGYSNDNVIVS 244
Query: 144 -ALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
A + YSK G V +A +VF + +V WN++I+G+ +++F + G
Sbjct: 245 NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGI 304
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
+PD + L L+ G + G++ + +V + SR + A+
Sbjct: 305 KPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHD 364
Query: 262 VFCSISN-PDLVTWSALI 278
+ CS+S PD V W +L+
Sbjct: 365 IICSMSMIPDPVLWQSLL 382
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 215/432 (49%), Gaps = 5/432 (1%)
Query: 123 LRLVHGGAVASGLGLDAICCSALVS--AYSKLGLVHEANRVFNGI-AEPDLVLWNSLISG 179
LR +H + +GL + L+ A S G + A +F+ ++P WN LI G
Sbjct: 21 LRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRG 80
Query: 180 YGCSAAWDVGMQMFSSMRLVG-TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDS 238
+ S++ + ++ M L +RPD +T L + +HG +SG
Sbjct: 81 FSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLD 140
Query: 239 DSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
D+ V + LV YS ++ A +VF + DLV+W+ +I +S G H + L ++++
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
E DS + +L+S A + + G +H ES V VS+ALIDMY+KCG L
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 359 FGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
I VF M +R+++++NS+I G G+HG EA F +++ G+ P+A TF LL C
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 419 HAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAIL 478
H GLV EG E F+ M +F++ +HY MV L G AG+LE + + + D +
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 479 GALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TG 537
LL C N EL E +KL Q + V++++IY+ ++R + +
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 538 GLRKMPGLSWIE 549
L+ +PG SWIE
Sbjct: 441 DLQTVPGWSWIE 452
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 171/348 (49%), Gaps = 7/348 (2%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAA--TNDINSAYHVFDKM-STRSVYLW 72
C S+ + +++H+ ++ L P L+R A T ++ A +FD S S W
Sbjct: 15 CNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDW 74
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADI-KPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
N +IR F+ S N++ + ML + + +PD +TF +++C + +HG +
Sbjct: 75 NYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVI 134
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
SG DAI ++LV YS G V A++VF+ + DLV WN +I + + +
Sbjct: 135 RSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
M+ M G D YTL LL A S L +G LH ++ +S V + L+ MY+
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 252 RCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT 311
+C +++A VF + D++TW+++I GY G + + FFRK++ + ++I
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 312 VLASIAQTANVRPGCEIHGYVI--RHGLESDVKVSSALIDMYSKCGFL 357
+L + V+ G E H ++ + L +VK ++D+Y + G L
Sbjct: 315 LLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 16/271 (5%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
KS+ + ++H ++++ D AT LVR Y+A + A VFD+M R + WN MI
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMI 180
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
F+ + A+S+++ M + D+YT ++ +CA L M ++H A
Sbjct: 181 CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCE 240
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+AL+ Y+K G + A VFNG+ + D++ WNS+I GYG + F M
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGL--HGLSHKSGLDSDSHVGS------LLVS 248
G RP+ T GLL G C QGL G+ H + S H+ +V
Sbjct: 301 VASGVRPNAITFLGLLLG-------CSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVD 353
Query: 249 MYSRCKCMDSAYR-VFCSISNPDLVTWSALI 278
+Y R ++++ ++ S + D V W L+
Sbjct: 354 LYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 142/549 (25%), Positives = 248/549 (45%), Gaps = 101/549 (18%)
Query: 10 SELSNVCKSLLRAKQLHACLLKT-----HLSQDPFYATKLVRLY-------AATNDINSA 57
S L +C++L Q HA + + Q+ +A L + A+ ++ A
Sbjct: 8 SYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYA 67
Query: 58 YHVFDKMSTRSVYLWNSMIRAFAL-------SQRFDNAVSLFRTMLGADIKPDNYTFACV 110
VF ++ S + +N++IR L S+RF F M + PD +TF V
Sbjct: 68 TSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRF------FVEMRRRSVPPDFHTFPFV 121
Query: 111 IRACA--DNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP 168
+ACA N DL +++ +H C AL + GL+
Sbjct: 122 FKACAAKKNGDLTLVKTLH--------------CQAL-----RFGLL------------S 150
Query: 169 DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLH 228
DL N+LI Y A D +Q+F + D T L+ G+
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDE----NPQRDVVTYNVLIDGLV------------ 194
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHE 288
+ + + A +F S+ DLV+W++LISGY+Q
Sbjct: 195 -----------------------KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCR 231
Query: 289 KVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALI 348
+ + F +++ K D++ + + L++ AQ+ + + G IH Y R L D +++ L+
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 349 DMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAA 408
D Y+KCGF+ + +F L ++ + ++N++I+GL +HG F +++ G+ PD
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 409 TFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQS 468
TF ++L C H+GLV+E R +F +M+ +++ +HY M LLG AG +EEA + +
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQ 411
Query: 469 LPEP---VDKAIL-GALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGR 524
+P+ +K + LL C GN E+AE A ++ +P D ++ +YA R
Sbjct: 412 MPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAER 471
Query: 525 WDDVKNLRD 533
W++V +R+
Sbjct: 472 WEEVVKVRE 480
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 195/388 (50%), Gaps = 3/388 (0%)
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
P LWN+++ Y + +Q++ M PD Y+L ++ +G+ L
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEH 287
H ++ + G D S +++Y + ++A +VF L +W+A+I G + G
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 288 EKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE--SDVKVSS 345
+ + F + + D + +V AS ++ ++H V++ E SD+ + +
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 346 ALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP 405
+LIDMY KCG + +F M +RN++S++S+I G +G EA F ++ E G+ P
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 406 DAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNL 465
+ TF +L AC H GLV EG+ F MK EF ++ HY +V LL G+L+EA +
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 466 TQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRW 525
+ +P + + G L+ C G+ E+AE VA + + P ++ V+L+N+YA G W
Sbjct: 380 VEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMW 439
Query: 526 DDVKNLRDKM-TGGLRKMPGLSWIEGSY 552
DV+ +R M T + K+P S+ ++
Sbjct: 440 KDVERVRKLMKTKKVAKIPAYSYASTTF 467
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 43/383 (11%)
Query: 8 LHSELSNVCKSLLRAKQLHACLLKTH-LSQDPFYATKLVRLYAATNDINSAYHVFDKMST 66
L + LSN C SL R +++H + ++ L Q P
Sbjct: 50 LATLLSN-CTSLARVRRIHGDIFRSRILDQYPI--------------------------- 81
Query: 67 RSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLV 126
+LWN+++R++ + +A+ ++ M+ + + PD Y+ VI+A D + + +
Sbjct: 82 --AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 127 HGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAW 186
H AV G D C S ++ Y K G A +VF+ E L WN++I G +
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLL---GGIADPSLLCIGQGLHG--LSHKSGLDSDSH 241
+ ++MF M+ G PD +T+ + GG+ D L + LH L K+ SD
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD---LSLAFQLHKCVLQAKTEEKSDIM 256
Query: 242 VGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMER 301
+ + L+ MY +C MD A +F + ++V+WS++I GY+ G + L FR++
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 302 KKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVS--SALIDMYSKCGFLHF 359
+ + I VL++ V G + + +++ E + +S ++D+ S+ G L
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEG-KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
Query: 360 GICVFRLMPER-NIISYNSVISG 381
V MP + N++ + ++ G
Sbjct: 376 AKKVVEEMPMKPNVMVWGCLMGG 398
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 127/273 (46%), Gaps = 8/273 (2%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFAL 81
K+LH+ ++ D F + + LY + +A VFD+ R + WN++I
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 82 SQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL--GLDA 139
+ R + AV +F M + ++PD++T V +C DL + +H + + D
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
+ ++L+ Y K G + A+ +F + + ++V W+S+I GY + ++ F MR
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSD---SHVGSLLVSMYSRCKCM 256
G RP+ T G+L L+ G+ + KS + + SH G +V + SR +
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAMM-KSEFELEPGLSHYGC-IVDLLSRDGQL 373
Query: 257 DSAYRVFCSIS-NPDLVTWSALISGYSQCGEHE 288
A +V + P+++ W L+ G + G+ E
Sbjct: 374 KEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVE 406
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 3/358 (0%)
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
SS++ G D Y L+ + G G H L+ K G SD ++GS LV +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 254 KCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
+++AY+VF + ++V+W+A+ISG++Q + L + K+ + +L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 314 ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII 373
++ + + G +H + GL+S + +S++LI MY KCG L +F ++++
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEK-GLAPDAATFSALLGACCHAGLVNEGREIFQR 432
S+NS+I+G HG A +A +F+ ++ K G PDA T+ +L +C HAGLV EGR+ F
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 433 MKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSE 492
M E +K HY +V LLG G L+EA L +++P + I G+LL C G+
Sbjct: 349 MA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 493 LAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A++ P A V L+N+YA G W + +R M GL+ PG SWIE
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIE 465
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 189/402 (47%), Gaps = 30/402 (7%)
Query: 76 IRAFALSQRFD-----NAVS--LFRTML---GADIKPDNYTF-----ACVIRACADNFDL 120
R A+S+ FD N VS L ML + +K D ++F + +R+C N D
Sbjct: 77 FRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDF 136
Query: 121 GMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY 180
H A+ G D S+LV Y G V A +VF + E ++V W ++ISG+
Sbjct: 137 RTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGF 196
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
D+ ++++S MR + P+ YT LL L G+ +H + GL S
Sbjct: 197 AQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYL 256
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
H+ + L+SMY +C + A+R+F SN D+V+W+++I+GY+Q G + + F +L+M
Sbjct: 257 HISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELF-ELMMP 315
Query: 301 RK--KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
+ K D+I VL+S V+ G + + HGL+ ++ S L+D+ + G L
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 359 FGICVFRLMPER-NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPD-AATFSALLGA 416
+ + MP + N + + S++ +HG R + L L PD AAT L
Sbjct: 376 EALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPDCAATHVQLANL 433
Query: 417 CCHAGLVNEGREIFQRMKDEFNIKARP-------EHYVYMVK 451
G E + + MKD+ +K P +YV+M K
Sbjct: 434 YASVGYWKEAATVRKLMKDK-GLKTNPGCSWIEINNYVFMFK 474
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 27/333 (8%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
H LK D + + LV LY + ++ +AY VF++M R+V W +MI FA R
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
D + L+ M + P++YTF ++ AC + LG R VH + GL ++
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS-SMRLVGTRP 203
L+S Y K G + +A R+F+ + D+V WNS+I+GY +++F M GT+P
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
D T G+L L+ G+ L + GL + + S LV + R + A +
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 264 CSIS-NPDLVTWSALISGYSQCGEHEKVLLFFR----KLIMERK-KLDSILVATVLASIA 317
++ P+ V W +L+ C H V R +L++E + +A + AS+
Sbjct: 382 ENMPMKPNSVIWGSLL---FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVG 438
Query: 318 ---QTANVR-----------PGC---EIHGYVI 333
+ A VR PGC EI+ YV
Sbjct: 439 YWKEAATVRKLMKDKGLKTNPGCSWIEINNYVF 471
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+L + + +H L L + L+ +Y D+ A+ +FD+ S + V WNSMI
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 78 AFALSQRFDNAVSLFRTML-GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+A A+ LF M+ + KPD T+ V+ +C + R GL
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLK 355
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
+ S LV + GL+ EA + + +P+ V+W SL+ + C DV + ++
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL--FSCRVHGDVWTGIRAA 413
Query: 196 MRLVGTRPD 204
+ PD
Sbjct: 414 EERLMLEPD 422
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 181/365 (49%), Gaps = 12/365 (3%)
Query: 186 WDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSL 245
W G+Q+ P+ Y A LL G+ +H G + ++
Sbjct: 100 WSSGLQV---------EPETY--AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVK 148
Query: 246 LVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
L+ +Y+ + +A +F S+ DL+ W+A+ISGY Q G ++ L + + R D
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
A+V + + + G H +I+ ++S++ V SAL+DMY KC G VF
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 366 LMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+ RN+I++ S+ISG G HG SE + F+++ E+G P+ TF +L AC H GLV++
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 426 GREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCC 485
G E F MK ++ I+ +HY MV LG AG L+EAY P + G+LL C
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 486 NSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPG 544
GN +L E A K + +P + V+ +N YA G + +R KM G++K PG
Sbjct: 389 RIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPG 448
Query: 545 LSWIE 549
S IE
Sbjct: 449 YSQIE 453
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 10/320 (3%)
Query: 41 ATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADI 100
AT ++R A I F + R + ++ ++ R AV L + G +
Sbjct: 52 ATTILRRMLAEKRIGR----FQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWSS-GLQV 106
Query: 101 KPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANR 160
+P+ T+A +++ C + + +H G L+ L+ Y+ G + A
Sbjct: 107 EPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGI 164
Query: 161 VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
+F + DL+ WN++ISGY G+ ++ MR PD YT A + +
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISG 280
L G+ H + K + S+ V S LV MY +C +RVF +S +++TW++LISG
Sbjct: 225 LEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISG 284
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR--HGLE 338
Y G+ +VL F K+ E + + + VL + V G E H Y ++ +G+E
Sbjct: 285 YGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIE 343
Query: 339 SDVKVSSALIDMYSKCGFLH 358
+ + +A++D + G L
Sbjct: 344 PEGQHYAAMVDTLGRAGRLQ 363
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 10/268 (3%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
K + K++HA + + + + KL+ LYA + D+ +A +F + R + WN+MI
Sbjct: 122 KEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMI 181
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ + ++ M I PD YTFA V RAC+ L + H + +
Sbjct: 182 SGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIK 241
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ I SALV Y K + +RVF+ ++ +++ W SLISGYG ++ F M
Sbjct: 242 SNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM 301
Query: 197 RLVGTRPDGYTLAGLL-----GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYS 251
+ G RP+ T +L GG+ D + + + G++ + + +V
Sbjct: 302 KEEGCRPNPVTFLVVLTACNHGGLVDKGW----EHFYSMKRDYGIEPEGQHYAAMVDTLG 357
Query: 252 RCKCMDSAYR-VFCSISNPDLVTWSALI 278
R + AY V S W +L+
Sbjct: 358 RAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 227/472 (48%), Gaps = 43/472 (9%)
Query: 120 LGMLRLVHGGAVASGLGLDAICCSALVSAYS-KLGLVHEANRVFNGIAEPDLVLWNSLIS 178
L L+ V + SGL C L+ + +L + A +F+ + P+ L+ ++++
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 179 GYGCSAAWDVGMQMFSSMRLVGTR----PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS 234
Y S FS RL+ R P+ + +L S +H KS
Sbjct: 97 AYSSSLPLHAS-SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 235 GLDSDSHVGSLLVSMY-SRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGE-HEKVLL 292
G V + L+ Y S + A ++F +S ++V+W+A++SGY++ G+ V L
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVAL 215
Query: 293 F------------------------------FRKLIMERK-KLDSILVATVLASIAQTAN 321
F FR++I E + + + V VL++ AQT
Sbjct: 216 FEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGT 275
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISG 381
++ IH + R L SDV VS++L+D+Y KCG L VF++ ++++ ++NS+I+
Sbjct: 276 LQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINC 335
Query: 382 LGLHGCASEAFRMFDRILE---KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFN 438
LHG + EA +F+ +++ + PD TF LL AC H GLV++GR F M + F
Sbjct: 336 FALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFG 395
Query: 439 IKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVA 498
I+ R EHY ++ LLG AG +EA + ++ D+AI G+LL+ C G+ +LAE
Sbjct: 396 IEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAV 455
Query: 499 QKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLSWIE 549
+ L NP + + M++N+Y G W++ + R + K PG S IE
Sbjct: 456 KNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIE 507
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 11/286 (3%)
Query: 1 MLTQIQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHV 60
++ Q LHS S+V L A+QL + + ++ T ++ YA + DI++A +
Sbjct: 161 VVVQTALLHSYASSVSHITL-ARQLFDEMSERNVVS----WTAMLSGYARSGDISNAVAL 215
Query: 61 FDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLG-ADIKPDNYTFACVIRACADNFD 119
F+ M R V WN+++ A + F AVSLFR M+ I+P+ T CV+ ACA
Sbjct: 216 FEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGT 275
Query: 120 LGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISG 179
L + + +H A L D ++LV Y K G + EA+ VF ++ L WNS+I+
Sbjct: 276 LQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINC 335
Query: 180 YGCSAAWDVGMQMFSSM---RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL-SHKSG 235
+ + + +F M + +PD T GLL L+ G+G L +++ G
Sbjct: 336 FALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFG 395
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISG 280
++ L+ + R D A V ++ D W +L++
Sbjct: 396 IEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 199/402 (49%), Gaps = 13/402 (3%)
Query: 152 LGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
+G++ AN+VF + E ++VLW S+I+GY + + S+ R P+ +
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNK------DLVSARRYFDLSPERDIV--- 91
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLD-SDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPD 270
L + +G L S + D + ++ Y+ M++ RVF + +
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 271 LVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVAT-VLASIAQTANVRPGCEIH 329
+ +W+ LI GY+Q G +VL F++++ E + + T VL++ A+ G +H
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 330 GYVIRHGLES-DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCA 388
Y G DV V +ALIDMY KCG + + VF+ + R++IS+N++I+GL HG
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 389 SEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY 448
+EA +F + G++PD TF +L AC H GLV +G F M +F+I EH
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 449 MVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPAD 508
+V LL AG L +A +P D I LL ++ E ++L + P +
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN 391
Query: 509 NAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
A VMLSNIY GR+DD L+ M G +K G+SWIE
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE 433
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 24/245 (9%)
Query: 48 YAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLG-ADIKPDNYT 106
YA D+ + VFD M R+V+ WN +I+ +A + R + F+ M+ + P++ T
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 107 FACVIRACAD--NFDLGMLRLVHGGAVASGLG-LDAICCSALVSAYSKLGLVHEANRVFN 163
V+ ACA FD G + VH G +D +AL+ Y K G + A VF
Sbjct: 191 MTLVLSACAKLGAFDFG--KWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
GI DL+ WN++I+G + +F M+ G PD T G+L C
Sbjct: 249 GIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCA-------CK 301
Query: 224 GQGL--HGLSHKSGLDSD-------SHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVT 273
GL GL++ + + +D H G +V + SR + A + D V
Sbjct: 302 HMGLVEDGLAYFNSMFTDFSIMPEIEHCGC-VVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 274 WSALI 278
W+ L+
Sbjct: 361 WATLL 365
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 166/423 (39%), Gaps = 51/423 (12%)
Query: 54 INSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRA 113
I SA VF +M ++V LW SMI + L++ +A F DI N + I
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIE- 102
Query: 114 CADNFDLGMLRLVHGGAVASGLG-LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVL 172
M ++ ++ + D + + ++ Y+ +G + RVF+ + E ++
Sbjct: 103 --------MGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 173 WNSLISGYGCSAAWDVGMQMFSSMRLVGTR-PDGYTLAGLLGGIADPSLLCIGQGLHGLS 231
WN LI GY + + F M G+ P+ T+ +L A G+ +H
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 232 HKSGLDS-DSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKV 290
G + D +V + L+ MY +C ++ A VF I DL++W+ +I+G + G +
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 291 LLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE-IHGYVIRHGLESDVKVSSALID 349
L F ++ D + VL + V G + + +++ ++D
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVD 334
Query: 350 MYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAAT 409
+ S+ GFL + MP + DA
Sbjct: 335 LLSRAGFLTQAVEFINKMP----------------------------------VKADAVI 360
Query: 410 FSALLGACCHAGLVNEGREIFQRMKDEFNIKAR-PEHYVYMVKLLGSAGELEEAYNLTQS 468
++ LLGA V+ G + + ++ R P ++V + + G AG ++A L +
Sbjct: 361 WATLLGASKVYKKVDIGEVALEEL---IKLEPRNPANFVMLSNIYGDAGRFDDAARLKVA 417
Query: 469 LPE 471
+ +
Sbjct: 418 MRD 420
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 24/159 (15%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
L+ +Y I A VF + R + WN+MI A A++LF M + I PD
Sbjct: 230 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPD 289
Query: 104 NYTFACVIRACADNFDLGMLRLVHGGAVASGLGL------------DAICCSALVSAYSK 151
TF V+ AC H G V GL + C +V S+
Sbjct: 290 KVTFVGVLCACK-----------HMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSR 338
Query: 152 LGLVHEANRVFNGI-AEPDLVLWNSLISGYGCSAAWDVG 189
G + +A N + + D V+W +L+ D+G
Sbjct: 339 AGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIG 377
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 239/477 (50%), Gaps = 26/477 (5%)
Query: 6 QWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS 65
+WL S SN + + K++HA LK Q ++ L+ D+ A VFD M
Sbjct: 90 EWLQS--SNGMRLI---KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMP 144
Query: 66 TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDN-YTFACVIRACADNFDLGMLR 124
++ W +MI + D A +LF + I+ N F C++ C+ + + R
Sbjct: 145 EKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGR 204
Query: 125 LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLIS-----G 179
VHG V G+G + I S+LV Y++ G + A R F+ + E D++ W ++IS G
Sbjct: 205 QVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 180 YGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSD 239
+G A + MF M P+ +T+ +L ++ L G+ +H L K + +D
Sbjct: 264 HGIKA-----IGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD 318
Query: 240 SHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
VG+ L+ MY++C + +VF +SN + VTW+++I+ +++ G E+ + FR IM
Sbjct: 319 VFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR--IM 376
Query: 300 ERKKL--DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL 357
+R+ L +++ V ++L + + G E+H +I++ +E +V + S L+ +Y KCG
Sbjct: 377 KRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGES 436
Query: 358 HFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
V + +P R+++S+ ++ISG G SEA ++++G+ P+ T+S+ L AC
Sbjct: 437 RDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Query: 418 CHAGLVNEGREIFQRMKDEFNIKARPEHYV--YMVKLLGSAGELEEAYNLTQSLPEP 472
++ + GR I K A +V ++ + G + EA+ + S+PE
Sbjct: 497 ANSESLLIGRSIHSIAKKN---HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK 550
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 198/395 (50%), Gaps = 1/395 (0%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
+Q+H ++K + + + LV YA ++ SA FD M + V W ++I A +
Sbjct: 204 RQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
A+ +F ML P+ +T +++AC++ L R VH V + D
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
++L+ Y+K G + + +VF+G++ + V W S+I+ + + + +F M+
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
+ T+ +L L +G+ LH K+ ++ + ++GS LV +Y +C A+ V
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442
Query: 263 FCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANV 322
+ + D+V+W+A+ISG S G + L F +++I E + + ++ L + A + ++
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 323 RPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGL 382
G IH ++ S+V V SALI MY+KCGF+ VF MPE+N++S+ ++I G
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+G EA ++ R+ +G D F+ +L C
Sbjct: 563 ARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 150/299 (50%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
K+L +Q+H+ ++K + D F T L+ +YA +I+ VFD MS R+ W S+I
Sbjct: 298 KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
A A + A+SLFR M + +N T ++RAC L + + +H + + +
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIE 417
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ S LV Y K G +A V + D+V W ++ISG + M
Sbjct: 418 KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM 477
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G P+ +T + L A+ L IG+ +H ++ K+ S+ VGS L+ MY++C +
Sbjct: 478 IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 257 DSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
A+RVF S+ +LV+W A+I GY++ G + L ++ E ++D + AT+L++
Sbjct: 538 SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIR 77
+LL K+LHA ++K + ++ + + LV LY + A++V ++ +R V W +MI
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ A+ + M+ ++P+ +T++ ++ACA++ L + R +H A +
Sbjct: 460 GCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS 519
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
+ SAL+ Y+K G V EA RVF+ + E +LV W ++I GY + +++ M
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Query: 198 LVGTRPDGYTLAGLLGGIADPSL 220
G D Y A +L D L
Sbjct: 580 AEGFEVDDYIFATILSTCGDIEL 602
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMI 76
+SLL + +H+ K H + F + L+ +YA ++ A+ VFD M +++ W +MI
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD 116
+A + A+ L M + D+Y FA ++ C D
Sbjct: 560 MGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGD 599
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 197/412 (47%), Gaps = 37/412 (8%)
Query: 172 LWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS 231
++N+LI Y + + + +F+ M +P+ T L+ + G LHG +
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 232 HKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP---------------------- 269
K G D V + V Y ++S+ ++F I NP
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 270 ---------DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
D+V+W+ +I+G+S+ G H K L+ F ++I + + + AT ++ ++ A
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 321 N-----VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISY 375
N +R G +IHGYV+ + + +AL+DMY K G L + +F + ++ + ++
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 376 NSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKD 435
N++IS L +G +A MF+ + + P+ T A+L AC + LV+ G ++F +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 436 EFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAE 495
E+ I EHY +V L+G AG L +A N QSLP D ++LGALL C N+EL
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 496 TVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMT-GGLRKMPGLS 546
TV ++L P V LS A D W + + +R M G+RK+P S
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 185/451 (41%), Gaps = 81/451 (17%)
Query: 33 HLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLF 92
HL Q Y++ ++ T + S V + T+ VY N++IR++ + + +++LF
Sbjct: 18 HLLQRFLYSSNQIK-QIHTVLLTSNALVASRWKTKCVY--NTLIRSYLTTGEYKTSLALF 74
Query: 93 RTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKL 152
ML + ++P+N TF +I+A +F + +HG A+ G D ++ V Y ++
Sbjct: 75 THMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEV 134
Query: 153 GLVHEANRVFNGIAEP-------------------------------DLVLWNSLISGYG 181
G + + ++F+ I P D+V W ++I+G+
Sbjct: 135 GDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFS 194
Query: 182 CSAAWDVGMQMFSSM----RLVGTRPDGYTLAGLLGGIA--DPSLLCIGQGLHGLSHKSG 235
+ +F M R V T P+ T +L A D + +G+ +HG
Sbjct: 195 KKGLHAKALMVFGEMIQNERAVIT-PNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKE 253
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFR 295
+ + +G+ L+ MY + ++ A +F I + + W+A+IS + G ++ L F
Sbjct: 254 IILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
Query: 296 KLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
+ + I + +L + A++ V G I ++S
Sbjct: 314 MMKSSYVHPNGITLLAILTACARSKLVDLG----------------------IQLFS--- 348
Query: 356 FLHFGICV-FRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
IC ++++P Y V+ +G G +A + PDA+ ALL
Sbjct: 349 ----SICSEYKIIPTSE--HYGCVVDLIGRAGLLVDAANFIQSL---PFEPDASVLGALL 399
Query: 415 GACCHAGLVNEGREIFQRMKDEFNIKARPEH 445
GAC ++E E+ + + I +P+H
Sbjct: 400 GAC----KIHENTELGNTVGKQL-IGLQPQH 425
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 23 KQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALS 82
KQ+H ++ + T L+ +Y D+ A +FD++ + V WN++I A A +
Sbjct: 243 KQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASN 302
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN--FDLGM 122
R A+ +F M + + P+ T ++ ACA + DLG+
Sbjct: 303 GRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 238/514 (46%), Gaps = 4/514 (0%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+H ++ + F + LV LYA ++ A +FD+M R++ + N ++R F +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAI-CC 142
++ M + + T+ +IR C+ + + + +H V SG + I
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 143 SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
+ LV YS G + + R FN + E D++ WNS++S + + +FS M+ G R
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS-HVGSLLVSMYSRCKCMDSAYR 261
P L + S + G+ +H K G D S HV S L+ MY +C ++++
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL 372
Query: 262 VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA--SIAQT 319
++ S+ +L ++L++ CG + ++ F +I E +D + ++TVL S++
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLP 432
Query: 320 ANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVI 379
++ +H I+ G +DV VS +LID Y+K G VF + NI S+I
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSII 492
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
+G +G ++ +M + L PD T ++L C H+GLV EG IF ++ ++ I
Sbjct: 493 NGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGI 552
Query: 440 KARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQ 499
+ Y MV LLG AG +E+A L D +LL C N + A+
Sbjct: 553 SPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAE 612
Query: 500 KLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRD 533
L P + A + +S Y G ++ + +R+
Sbjct: 613 VLMNLEPENFAVYIQVSKFYFEIGDFEISRQIRE 646
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 159/342 (46%), Gaps = 17/342 (4%)
Query: 151 KLGLVHEANRVFNGIAEPDLVLWNSLISG---YGCSAAWDVGMQMFSSMRLVGTRPDGYT 207
K G + A+ F+ ++ D+V +N LISG YGCS +++++ M G R T
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLR---AIELYAEMVSCGLRESAST 114
Query: 208 LAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS 267
+L +D G +H G + V S LV +Y+ + +D A ++F +
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
+ +L + L+ + Q GE +++ + ++ +E + + ++ + V G +
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 328 IHGYVIRHGLE-SDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHG 386
+H V++ G S++ V++ L+D YS CG L + F +PE+++IS+NS++S +G
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 387 CASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF-QRMKDEFNIKARPEH 445
++ +F ++ G P F + L C + G++I +K F++ +
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 446 YVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNS 487
++ + G +E + L QSLP L CCNS
Sbjct: 355 SA-LIDMYGKCNGIENSALLYQSLP--------CLNLECCNS 387
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 167/293 (56%), Gaps = 5/293 (1%)
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLI-MERKKLDSILVATVLASIA 317
A +V + S+ +++TW+ +I GY + ++E+ L + ++ K + A+ LA+ A
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNS 377
+ ++ +H +I G+E + +SSAL+D+Y+KCG + VF + ++ +N+
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
+I+G HG A+EA R+F + + ++PD+ TF LL C H GL+ EG+E F M F
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETV 497
+I+ + EHY MV LLG AG ++EAY L +S+P D I +LLS + N EL E
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356
Query: 498 AQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPGLSWIE 549
Q L + D V+LSNIY+ +W+ + +R+ M+ G+RK G SW+E
Sbjct: 357 IQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 57 AYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLG-ADIKPDNYTFACVIRACA 115
A V S ++V WN MI + + +++ A+ + ML DIKP+ ++FA + ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 116 DNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNS 175
DL + VH + SG+ L+AI SALV Y+K G + + VF + D+ +WN+
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 176 LISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL-SHKS 234
+I+G+ +++FS M PD T GLL + LL G+ GL S +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 235 GLDSD-SHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALIS 279
+ H G+ +V + R + AY + S+ PD+V W +L+S
Sbjct: 297 SIQPKLEHYGA-MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM-RLVGTRP 203
++ + K+G A +V ++ +++ WN +I GY + ++ ++ +M +P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
+ ++ A L A L + +H L SG++ ++ + S LV +Y++C + ++ VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 264 CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVR 323
S+ D+ W+A+I+G++ G + + F ++ E DSI +L + + +
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 324 PGCEIHGYVIRH-GLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-ERNIISYNSVIS 380
G E G + R ++ ++ A++D+ + G + + MP E +++ + S++S
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 30/176 (17%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRA 78
L AK +H+ ++ + + + ++ LV +YA DI ++ VF + V +WN+MI
Sbjct: 181 LHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITG 240
Query: 79 FALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA---------DNFDLGMLR----- 124
FA A+ +F M + PD+ TF ++ C+ + F L R
Sbjct: 241 FATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQP 300
Query: 125 -LVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-EPDLVLWNSLIS 178
L H GA+ LG + G V EA + + EPD+V+W SL+S
Sbjct: 301 KLEHYGAMVDLLG--------------RAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 220/439 (50%), Gaps = 25/439 (5%)
Query: 126 VHGGAVASGLGLDAICCSALVS----------AYSKLGLVHEANRVFNGIAEPDLVLWNS 175
+HG S L D+ S LV A+++ L+H ++ + P WN
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSD------STPST--WNM 83
Query: 176 LISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
L GY S + + ++S M+ G +P+ T LL A L G+ + K G
Sbjct: 84 LSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHG 143
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFR 295
D D +VG+ L+ +Y CK A +VF ++ ++V+W+++++ + G+ V F
Sbjct: 144 FDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFC 203
Query: 296 KLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
++I +R D + +L++ N+ G +H V+ LE + ++ +AL+DMY+K G
Sbjct: 204 EMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSG 261
Query: 356 FLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL-EKGLAPDAATFSALL 414
L + VF M ++N+ +++++I GL +G A EA ++F +++ E + P+ TF +L
Sbjct: 262 GLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVL 321
Query: 415 GACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVD 474
AC H GLV++G + F M+ IK HY MV +LG AG L EAY+ + +P D
Sbjct: 322 CACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPD 381
Query: 475 KAILGALLSCCNSCGNSE---LAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNL 531
+ LLS C+ + + + E V ++L + P + V+++N +A W + +
Sbjct: 382 AVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEV 441
Query: 532 RDKMT-GGLRKMPGLSWIE 549
R M ++K+ G S +E
Sbjct: 442 RRVMKETKMKKIAGESCLE 460
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 206/474 (43%), Gaps = 47/474 (9%)
Query: 14 NVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAAT--NDINSAYHVFDKMSTRSVYL 71
+C S+ Q+H + + L D F ++LVR+ + + D+ A + S +
Sbjct: 21 KLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPST 80
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
WN + R ++ S ++ ++ M IKP+ TF +++ACA L R + +
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
G D + L+ Y +A +VF+ + E ++V WNS+++ + ++ +
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 192 MFSSMRLVGTR--PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSM 249
F M +G R PD T+ LL L +G+ +H L+ + +G+ LV M
Sbjct: 201 CFCEM--IGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 250 YSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILV 309
Y++ ++ A VF + + ++ TWSA+I G +Q G E+ L F K++ E
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE--------- 307
Query: 310 ATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE 369
++VRP YV G+ + + D Y + H + ++ P
Sbjct: 308 ----------SSVRP-----NYVTFLGVLCACSHTGLVDDGYK---YFHEMEKIHKIKP- 348
Query: 370 RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC-CHAGLVNEGRE 428
+I Y +++ LG G +EA +D I + PDA + LL AC H +EG
Sbjct: 349 -MMIHYGAMVDILGRAGRLNEA---YDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEG-- 402
Query: 429 IFQRMKDEFNIKARPE---HYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILG 479
I +++K I+ P+ + V + A EA + + + E K I G
Sbjct: 403 IGEKVKKRL-IELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAG 455
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 209/435 (48%), Gaps = 39/435 (8%)
Query: 154 LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLG 213
L+ A++VF+ I E D++ ++I + + Q F + +G RP+ +T ++G
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 214 GIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLV- 272
+ +G+ LH + K GL S+ VGS +++ Y + + A R F +P++V
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 273 ------------------------------TWSALISGYSQCGEHEKVLLFFRKLIMERK 302
TW+A+I G+SQ G +E+ + F ++ E
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 303 KL-DSILVATVLASIAQTANVRPGCEIHGYVIRH-GLESDVKVSSALIDMYSKCGFLHFG 360
+ + + +I+ A+ G IH I+ G +V V ++LI YSKCG +
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 361 ICVFRLMPE--RNIISYNSVISGLGLHGCASEAFRMFDRIL-EKGLAPDAATFSALLGAC 417
+ F + E RNI+S+NS+I G +G EA MF++++ + L P+ T +L AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 418 CHAGLVNEGREIFQRMKDEFNIKA--RPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDK 475
HAGL+ EG F + ++++ EHY MV +L +G +EA L +S+P
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 476 AILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
ALL C N LA+ A K+ + +P D + VMLSN Y+ W +V +R KM
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 536 T-GGLRKMPGLSWIE 549
GL++ G SWIE
Sbjct: 462 KETGLKRFTGCSWIE 476
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 192/426 (45%), Gaps = 48/426 (11%)
Query: 34 LSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFR 93
+++ P +LV+ + ++ I +A+ VFD++ V ++I F R A F+
Sbjct: 24 VTKSPNSIPELVK-HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFK 82
Query: 94 TMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLG 153
+L I+P+ +TF VI + + D+ + + +H A+ GL + SA+++ Y KL
Sbjct: 83 RLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLS 142
Query: 154 LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM--RLVGTR--------- 202
+ +A R F+ +P++V +LISGY ++ + +F +M R V T
Sbjct: 143 TLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQ 202
Query: 203 ---------------------PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS-GLDSDS 240
P+ T + I++ + G+ +H + K G +
Sbjct: 203 TGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV 262
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISNP--DLVTWSALISGYSQCGEHEKVLLFFRKLI 298
V + L+S YS+C M+ + F + ++V+W+++I GY+ G E+ + F K++
Sbjct: 263 FVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMV 322
Query: 299 MERK-KLDSILVATVL-----ASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYS 352
+ + +++ + VL A + Q + ++ Y + LE ++ + ++DM S
Sbjct: 323 KDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLE--LEHYACMVDMLS 380
Query: 353 KCGFLHFGICVFRLMP-ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP-DAATF 410
+ G + + MP + I + +++ G +H A +ILE L P D +++
Sbjct: 381 RSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILE--LDPRDVSSY 438
Query: 411 SALLGA 416
L A
Sbjct: 439 VMLSNA 444
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 177/335 (52%), Gaps = 11/335 (3%)
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI-SNPDLVTWSALISGYS 282
G+ +H L K G ++ + + LV YS +D A +VF ++V W+A+IS Y+
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 283 QCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG--LESD 340
+ + + F+++ E+ +LD ++V L++ A V+ G EI+ I+ L D
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 341 VKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMF----- 395
+ + ++L++MY K G +F +++ +Y S+I G L+G A E+ +F
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 396 -DRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLG 454
D+ + + P+ TF +L AC H+GLV EG+ F+ M ++N+K R H+ MV L
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 455 SAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAFKVM 514
+G L++A+ +P + I LL C+ GN EL E V +++F+ + V
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 515 LSNIYAGDGRWDDVKNLRDKMTGGLRKMPGLSWIE 549
LSNIYA G WD+ +RD++ R+MPG SWIE
Sbjct: 384 LSNIYASKGMWDEKSKMRDRVRK--RRMPGKSWIE 416
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 27/290 (9%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR-SVYLWNSMI 76
S L +Q+HA + K + T LV Y++ D++ A VFD+ + ++ LW +MI
Sbjct: 80 SSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMI 139
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG-- 134
A+ ++ A+ LF+ M I+ D + ACAD + M ++ ++
Sbjct: 140 SAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRR 199
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFS 194
L +D ++L++ Y K G +A ++F+ D+ + S+I GY + +++F
Sbjct: 200 LAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK 259
Query: 195 SMRLVGT------RPDGYTLAGLLGGIADPSLLCIGQGL--HGLSHKSGLDSD------- 239
M+ + P+ T G+L + C GL G H + D
Sbjct: 260 KMKTIDQSQDTVITPNDVTFIGVL-------MACSHSGLVEEGKRHFKSMIMDYNLKPRE 312
Query: 240 SHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHE 288
+H G +V ++ R + A+ + P+ V W L+ S G E
Sbjct: 313 AHFGC-MVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 278 ISGYSQCGEHEKVLLFFRKLIMERKKLD---SILVATVLASIAQTANVRPGCEIHGYVIR 334
+ Y + GE K LL FR + S+L A ++S AQ A+ G +IH V +
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSS-AQKASSLDGRQIHALVRK 93
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER-NIISYNSVISGLGLHGCASEAFR 393
G + +++ ++L+ YS G + + VF PE+ NI+ + ++IS + + EA
Sbjct: 94 LGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIE 153
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQR 432
+F R+ + + D + L AC G V G EI+ R
Sbjct: 154 LFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSR 192
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 212/464 (45%), Gaps = 37/464 (7%)
Query: 116 DNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNS 175
D+ + L VH + SG D+ L+ + S+ G ++ I + L N
Sbjct: 31 DSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANP 88
Query: 176 LISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG 235
+ Y S++ + + + G PD YT L+ I + G+ HG + K G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 236 LDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGE--------- 286
D V + L+ MY+ C +D A ++F I D+V+W+++I+G + G+
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 287 --HEKVLL--------------------FFRKLIMERKKLDSILVATVLASIAQTANVRP 324
+K ++ FR+++ + + + +L + ++A ++
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGL 384
G +H +IR L S V + +ALIDMY KC + +F + RN +++N +I L
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
HG +F+ ++ L PD TF +L C AGLV++G+ + M DEF IK
Sbjct: 329 HGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFG 388
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPEP---VDKAILGALLSCCNSCGNSELAETVAQKL 501
H M L SAG EEA ++LP+ + LLS GN L E++A+ L
Sbjct: 389 HQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSL 448
Query: 502 FQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTG-GLRKMPG 544
+ +P + + +L NIY+ GRW+DV +R+ + + ++PG
Sbjct: 449 IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPG 492
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 165/385 (42%), Gaps = 42/385 (10%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQ 83
Q+HA L+ + D +A +L++ + D S+Y V S +Y N + +A+ +S
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGD--SSYTVSIYRSIGKLYCANPVFKAYLVSS 97
Query: 84 RFDNAVSLFRTMLGADIKPDNYTF----ACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
A+ + +L PD+YTF +C+ + C D G ++ HG A+ G
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCC--VDSG--KMCHGQAIKHGCDQVL 153
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSA--------------- 184
++L+ Y+ G + A ++F I + D+V WNS+I+G +
Sbjct: 154 PVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDK 213
Query: 185 ---AWD-------------VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLH 228
+W+ V + +F M G + + TL LL + L G+ +H
Sbjct: 214 NIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVH 273
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHE 288
++ L+S + + L+ MY +CK + A R+F S+S + VTW+ +I + G E
Sbjct: 274 ASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPE 333
Query: 289 KVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI-RHGLESDVKVSSAL 347
L F +I + D + VL A+ V G + ++ ++ + +
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 348 IDMYSKCGFLHFGICVFRLMPERNI 372
++YS GF + +P+ ++
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDV 418
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSM 75
C +L AK+L + K + +VR D+ +A+ +FD+M +++ WN M
Sbjct: 166 CGALDLAKKLFVEIPKRDIVSWNSIIAGMVR----NGDVLAAHKLFDEMPDKNIISWNIM 221
Query: 76 IRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGL 135
I A+ + ++SLFR M+ A + + T ++ AC + L R VH + + L
Sbjct: 222 ISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFL 281
Query: 136 GLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
+ +AL+ Y K V A R+F+ ++ + V WN +I + + G+++F +
Sbjct: 282 NSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEA 341
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL 230
M RPD T G+L G A L+ GQ + L
Sbjct: 342 MINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 36/397 (9%)
Query: 111 IRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDL 170
+R C++ L+ +H + L D + L+S S G A+ VFN + P
Sbjct: 27 LRTCSN---FSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 171 VLWNSLISGYGCSAAWDVGMQMFSSMRLV-GTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
WN +I + + +F M + ++ D +T ++ S + +G +HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCS----------------ISNPDL-- 271
L+ K+G +D + L+ +Y +C DS +VF +SN L
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 272 -------------VTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
V+W+A+I+ Y + ++ FR++ ++ K + + +L + Q
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSV 378
++ G +H Y ++G D + +ALIDMYSKCG L VF +M +++ ++NS+
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 379 ISGLGLHGCASEAFRMFDRILEKG-LAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
I+ LG+HGC EA +F+ + E+ + PDA TF +L AC + G V +G F RM +
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVD 474
I EH M++LL A E+E+A NL +S+ D
Sbjct: 384 GISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 35/354 (9%)
Query: 15 VCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS 74
C + + KQ+H ++K +L+ D +L+ + ++ + A VF+++ + S + WN
Sbjct: 29 TCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNL 88
Query: 75 MIRAFALSQRFDNAVSLF-RTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVAS 133
MIR+ +++ + A+ LF M+ + D +TF VI+AC + + + VHG A+ +
Sbjct: 89 MIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKA 148
Query: 134 GLGLDAICCSALVSAYSK--------------------------LGLVHE-----ANRVF 162
G D + L+ Y K GLV A VF
Sbjct: 149 GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVF 208
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLC 222
N + ++V W ++I+ Y + D Q+F M++ +P+ +T+ LL L
Sbjct: 209 NQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLS 268
Query: 223 IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALIS--G 280
+G+ +H +HK+G D +G+ L+ MYS+C + A +VF + L TW+++I+ G
Sbjct: 269 MGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLG 328
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
CGE E + LF + D+I VL++ A T NV+ G +I+
Sbjct: 329 VHGCGE-EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 171/353 (48%), Gaps = 37/353 (10%)
Query: 233 KSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEK--- 289
K G +S +V + LV MY M A++VF + + VTW+ +I+G + G+ EK
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 290 -----------------------------VLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+LLF R + + K + I + +L ++
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 321 NVRPGCEIHGYVIRHG-LESDVKVSSALIDMYSKCGFLHFGICVFRLMP--ERNIISYNS 377
+++ +H YV + G + D++V+++LID Y+KCG + F +P +N++S+ +
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG-REIFQRMKDE 436
+IS +HG EA MF + GL P+ T ++L AC H GL E E F M +E
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAET 496
+ I +HY +V +L G LEEA + +P + LL C+ ++ELAE
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM-TGGLRKMPGLSWI 548
V +KL + + V++SNI+ G GR+ D + R +M G+ K+PG S +
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 14/260 (5%)
Query: 53 DINSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD-IKPDNYTFACVI 111
D A +KM R+V W ++I +A + A+ LF M+ D IKP+ T ++
Sbjct: 204 DFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAIL 263
Query: 112 RACADNFDLGMLRLVHGGAVASG-LGLDAICCSALVSAYSKLGLVHEANRVFNGI--AEP 168
A + DL M VH G + D ++L+ AY+K G + A + F I
Sbjct: 264 PAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRK 323
Query: 169 DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL-----GGIADPSLLCI 223
+LV W ++IS + + MF M +G +P+ T+ +L GG+A+ L
Sbjct: 324 NLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFL-- 381
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYS 282
+ + + ++ + D LV M R ++ A ++ I V W L+ S
Sbjct: 382 -EFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACS 440
Query: 283 QCGEHEKVLLFFRKLI-MER 301
+ E RKL+ +ER
Sbjct: 441 VYDDAELAERVTRKLMELER 460
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 166/391 (42%), Gaps = 55/391 (14%)
Query: 62 DKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTML--------GADIKP-DNYTFACVIR 112
K ++ ++L+N ++R ++L + +A L+ + + P D++T+ +++
Sbjct: 70 QKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLK 129
Query: 113 ACADNFDLGMLRLVHGGAVASGLGLDA--ICCSALVSAYSKLGLVHEANRVFNGIAEPDL 170
A ++ +L + + LG ++ +ALV Y G + +A++VF+ + E +
Sbjct: 130 ASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNP 189
Query: 171 VLWNSLISGYGCSAAWDVGMQMFSSM-----------------------------RLVG- 200
V WN +I+G ++ + M R+V
Sbjct: 190 VTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVAC 249
Query: 201 --TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSG-LDSDSHVGSLLVSMYSRCKCMD 257
+P+ T+ +L + + L + +H K G + D V + L+ Y++C C+
Sbjct: 250 DAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQ 309
Query: 258 SAYRVFCSISN--PDLVTWSALISGYSQCGEHEKVLLFFRK-----LIMERKKLDSILVA 310
SA++ F I N +LV+W+ +IS ++ G ++ + F+ L R + S+L A
Sbjct: 310 SAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNA 369
Query: 311 TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP-E 369
+A+ + + V + + DVK L+DM + G L + +P E
Sbjct: 370 CSHGGLAEEEFLE---FFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIE 426
Query: 370 RNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+ + ++ ++ A A R+ +++E
Sbjct: 427 EKAVVWRMLLGACSVYDDAELAERVTRKLME 457
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 209/461 (45%), Gaps = 83/461 (18%)
Query: 25 LHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNSMIRAFALSQR 84
A + K +DP+ ++ +Y + SA VFD++S R WN MI +
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGN 182
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
+ A LF D+ P+N D + +
Sbjct: 183 KEEACKLF------DMMPEN---------------------------------DVVSWTV 203
Query: 145 LVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
+++ ++K+ + A + F+ + E +V WN+++SGY + + +++F+ M +G RP+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 205 GYTLAGLLGGI---ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
T ++ ADPSL + L L + + + V + L+ M+++C+ + SA R
Sbjct: 264 ETTWVIVISACSFRADPSL---TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 262 VFCSI-SNPDLVTWSALISGYSQCGEHEKV------------------------------ 290
+F + + +LVTW+A+ISGY++ G+
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 291 -LLFFRKLI-MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALI 348
+ FF +I K D + + +VL++ A++ G I Y+ ++ ++ + +LI
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 349 DMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAA 408
MY++ G L VF M ER+++SYN++ + +G E + ++ ++G+ PD
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 409 TFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYM 449
T++++L AC AGL+ EG+ IF+ +++ +HY M
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIRNPL-----ADHYACM 536
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 232/527 (44%), Gaps = 37/527 (7%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSVYL----WNSMIRAFALSQRFDNAVSLFRTMLGA- 98
LVR Y ++ I+SA VFD M V L +N ++ + L + ++A+ + M+
Sbjct: 176 LVR-YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF 234
Query: 99 DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEA 158
+ PDN T+ +++A + L L+ + +GL + + + LV Y KLG + EA
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 159 NRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG 214
++ + + PDL +N LI+G + + G+++ +M+ + +PD T L+ G
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 215 IADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN-----P 269
+ L + L G+ ++ ++ + + + ++ R + + P
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 270 DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIH 329
D+VT+ LI Y + G+ L R++ + K+++I + T+L ++ + + +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 330 GYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII----SYNSVISGLGLH 385
+ G D LI + + + + ++ M + I ++NS+I GL H
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 386 GCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF-QRMKDEFNIKARPE 444
G A FD + E GL PD +TF++++ C G V + E + + +K F +P+
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF----KPD 590
Query: 445 HYVYMVKLLG--SAGELEEAYNLTQSLPE--PVDKAILGALLSC-CNSCGNSE----LAE 495
+Y + L G G E+A N +L E VD ++S C E L+E
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 496 TVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKMTGGLRKM 542
+ L + N+F +L DG+ + L K +G M
Sbjct: 651 MEEKGLEPDRFTYNSFISLL----MEDGKLSETDELLKKFSGKFGSM 693
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/482 (20%), Positives = 214/482 (44%), Gaps = 38/482 (7%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIR 77
A+ + +L++ +S + F L+R + +I+ A +FDKM T+ +V +N++I
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ ++ D+ L R+M ++P+ ++ VI + + V G L
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 138 DAICCSALVSAYSKLG-----LVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQM 192
D + + L+ Y K G LV A + +G+ P ++ + SLI + + M+
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
MR+ G P+ T L+ G + + + + +G + L++ +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 253 CKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
M+ A V + +PD+V++S ++SG+ + + ++ L R+++ + K D+I
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
++++ + + C+++ ++R GL D +ALI+ Y G L + + M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 369 ER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC------- 417
E+ ++++Y+ +I+GL EA R+ ++ + P T+ L+ C
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 418 --------CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQ 467
C G++ E ++F+ M +P+ Y + + G AG++ +AY L +
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESM---LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 468 SL 469
+
Sbjct: 665 EM 666
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 156/421 (37%), Gaps = 71/421 (16%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV----YLWNSMI 76
+A +HA +L+ L+ T L+ ++N A D+M R + + +++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
F+ + A + R M P T+ +I G +G
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI----------------NGHCVTGKM 431
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
DAI A++ + GL PD+V +++++SG+ S D +++ M
Sbjct: 432 EDAI---AVLEDMKEKGL------------SPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G +PD T + L+ G + L+ + GL D + L++ Y CM
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY----CM 532
Query: 257 DSAYRVFCSISN--------PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
+ + N PD+VT+S LI+G ++ + KL E +
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
T+ I +N+ + K +LI + G + VF M
Sbjct: 593 YHTL---IENCSNI-----------------EFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 369 ERNI----ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
+N +YN +I G G +A+ ++ +++ G T AL+ A G VN
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 425 E 425
E
Sbjct: 693 E 693
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 168/377 (44%), Gaps = 17/377 (4%)
Query: 55 NSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACV 110
+ A + KM +R +V +N+++ + D A +F +L +KP+NYT++ +
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 111 IRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF-NGIAEPD 169
I C N D V +S + ++ + +++ K+G +A + N I E
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 170 LVL----WNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
L + +NS+I G+ D + + M G P+ T L+ G+ + +
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGY 281
+ G+ D L+ + + M+SA +F + NP +++LISG+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
G L ++K++ + + D T++ + + N+ E++ + GL D
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNIIS----YNSVISGLGLHGCASEAFRMFDR 397
+ + +++ SK G + +F M + N+ YN+VI+G G EAFR+ D
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 398 ILEKGLAPDAATFSALL 414
+L+KG+ PD ATF L+
Sbjct: 820 MLDKGILPDGATFDILV 836
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/508 (17%), Positives = 209/508 (41%), Gaps = 23/508 (4%)
Query: 18 SLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV----YLWN 73
SL AK+L++ ++ + D L+R A V + R L++
Sbjct: 213 SLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 74 SMIRAFALSQRFDNAVSLFRTMLGADI-KPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
++A + A SL R M + P T+ VI A ++ + ++
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS 332
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDV 188
G+ ++ + ++L++ + K + A +F+ + + P+ V ++ LI + + +
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
++ + M ++G P + + ++ G L S ++GL ++ V + ++S
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILS 451
Query: 249 MYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
+ D A + + + P++V+++ ++ G+ + + + F ++ + K
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
++ + ++ + + + E+ ++ +E + V +I+ K G +
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 365 RLMPER-----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
M E + +SYNS+I G G A ++ + G++P+ T+++L+ C
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 420 AGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEP---VDKA 476
+++ E+ MK++ +K Y ++ +E A L L E +
Sbjct: 632 NNRMDQALEMRDEMKNK-GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 477 ILGALLSCCNSCGNSELAETVAQKLFQN 504
I +L+S + GN A + +K+ ++
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKD 718
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/525 (22%), Positives = 213/525 (40%), Gaps = 77/525 (14%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMST----RSVYLWNSMIRAFALSQRFDNAVSLFRTMLG 97
T ++ L ++ VFD+M + RSV+ + ++I A+ + R++ ++ L M
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 98 ADIKPDNYTFACVIRACAD-NFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVH 156
I P T+ VI ACA D L + G+ D + + L+SA + GL
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 157 EANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
EA VF + + PDL ++ L+ +G + + M G+ PD + LL
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 213 GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF----CSISN 268
A + G+ +G +++ S+L++++ + D ++F S ++
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI 328
PD T++ LI + + G ++V+ F ++ E N+ P E
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEE--------------------NIEPDMET 424
Query: 329 HGYVI----RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNII----SYNSVIS 380
+ +I + GL D + + + M +I+ +Y VI
Sbjct: 425 YEGIIFACGKGGLHEDARK-------------------ILQYMTANDIVPSSKAYTGVIE 465
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
G EA F+ + E G P TF +LL + GLV E I R+ D I
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS-GIP 524
Query: 441 ARPEHYVYMVKLLGSAGELEEA----YNLTQSLPEPVDKAILGALLSC------CNSCGN 490
+ + ++ G+ EEA ++ +S +P D+ L A+LS + C
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP-DERTLEAVLSVYSFARLVDEC-R 582
Query: 491 SELAETVAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
+ E A + P+ + +ML+ +Y RWDDV L ++M
Sbjct: 583 EQFEEMKASDIL---PSIMCYCMMLA-VYGKTERWDDVNELLEEM 623
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/574 (21%), Positives = 227/574 (39%), Gaps = 83/574 (14%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR------------- 67
A Q + +++ L D F T L+ Y D++SA+ VF++M +
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
Query: 68 --------------------------SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIK 101
+V + +I++ S+R A++L + M IK
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 102 PDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRV 161
P+ +T+ +I + R + G + GL + I +AL++ Y K G++ +A V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 162 FNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD 217
+ P+ +N LI GY C + M + + M PD T L+ G
Sbjct: 416 VELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 218 PSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS----NPDLVT 273
L L + GL D + ++ + K ++ A +F S+ NP++V
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
++ALI GY + G+ ++ L K++ + +S+ ++ + ++ + ++
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM----PERNIISYNSVISGLGLHGCAS 389
+ GL+ V + LI K G F+ M + + +Y + I G
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 390 EAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYM 449
+A M ++ E G++PD T+S+L+ G N ++ +RM+D P + ++
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD---TGCEPSQHTFL 711
Query: 450 V-----------KLLGSAGEL---------EEAYNLTQSLPE----PVDKAILGALLSCC 485
K GS EL + L + + E P K+ +L C
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 486 NSCGNSELAETVAQKLFQN---NPADNAFKVMLS 516
GN +AE V + +N +P++ F +LS
Sbjct: 772 -EVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 179/419 (42%), Gaps = 34/419 (8%)
Query: 141 CCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
C + L+++ ++ GLV E +V+ + E P++ +N +++GY + Q S +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G PD +T L+ G L + G + + L+ + +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 257 DSAYRVFCSISN----PDLVTWSALISGYSQCG-EHEKVLLFFRKLIMERKKLDSILVAT 311
D A +F + + P + T++ LI S CG E + L K + E +I T
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIK--SLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 312 VLA-SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER 370
VL S+ E+ G ++ GL +V +ALI+ Y K G + + V LM R
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 371 ----NIISYNSVISGLGLHGCAS---EAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
N +YN +I G C S +A + +++LE+ + PD T+++L+ C +G
Sbjct: 423 KLSPNTRTYNELIKGY----CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 424 NEGREIFQRMKDEFNIKARPEHYVY--MVKLLGSAGELEEAYNLTQSLPEP---VDKAIL 478
+ + M D + P+ + Y M+ L + +EEA +L SL + + +
Sbjct: 479 DSAYRLLSLMNDRGLV---PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 479 GALLSCCNSCGNSELAETVAQKLFQNN--PADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
AL+ G + A + +K+ N P F ++ + A DG+ + L +KM
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA-DGKLKEATLLEEKM 593
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/415 (18%), Positives = 168/415 (40%), Gaps = 16/415 (3%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
++Y +N M+ + + A ++ A + PD +T+ +I DL V
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCS 183
G + + + L+ + EA +F + + P + + LI S
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ + M G +P+ +T L+ + + L G + GL +
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
+ L++ Y + ++ A V + + P+ T++ LI GY + H+ + + + ++
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK--ML 454
Query: 300 ERKKL-DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
ERK L D + +++ ++ N + + GL D +++ID K +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 359 FGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
+F + ++ N++ Y ++I G G EA M +++L K P++ TF+AL+
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 415 GACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
C G + E + ++M + ++ ++ L G+ + AY+ Q +
Sbjct: 575 HGLCADGKLKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 182/428 (42%), Gaps = 24/428 (5%)
Query: 29 LLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQR 84
++K D + L+ Y I+ A + D+M + +N++I L +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFD----LGMLRLVHGGAVASGLGLDAI 140
AV+L M+ +PD +T+ V+ D L +L+ + G + + D +
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA----DVV 256
Query: 141 CCSALVSAYSKLGLVHEANRVF----NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ ++ A V++A +F N P++V +NSLI W ++ S M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
P+ T + L+ L + L+ K +D D S L++ + +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 257 DSAYRVF-CSISN---PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
D A +F IS P++VT++ LI G+ + E+ + FR++ +++ T+
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP---- 368
+ + Q + +I ++ G+ D+ S L+D K G L + VF +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
E +I +YN +I G+ G + + +F + KG+ P+ ++ ++ C GL E
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 429 IFQRMKDE 436
+F+ MK++
Sbjct: 557 LFREMKED 564
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 203/483 (42%), Gaps = 56/483 (11%)
Query: 40 YATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTM 95
Y KL R ++ A +F +M S+ +N ++ A A +FD +SL M
Sbjct: 47 YREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 106
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLV 155
I D Y++ +I L + V G + G D + S+L++ Y +
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 156 HEA----NRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
EA +++F +P+ V +N+LI G + + M G +PD +T +
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN--- 268
+ G+ + + L K +++D + + ++ K ++ A +F + N
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 269 -PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
P++VT+++LI G +I + + + + ++ + + + +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 328 IHGYVIRHGLESDVKVSSALID-----------------MYSKCGF-------------- 356
++ +I+ ++ D+ S+LI+ M SK F
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 357 ----LHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAA 408
+ G+ +FR M +R N ++YN++I GL G A ++F +++ G+ PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 409 TFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY--MVKLLGSAGELEEAYNLT 466
T+S LL C G + + +F+ ++ K P+ Y Y M++ + AG++E+ ++L
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKS---KMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 467 QSL 469
SL
Sbjct: 524 CSL 526
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 190/461 (41%), Gaps = 74/461 (16%)
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA--DNFDLGMLRLVHGGAVASG 134
R L + D+AV LF M+ + P F ++ A A + FDL ++ G
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL----VISLGERMQN 108
Query: 135 LGL--DAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDV 188
L + D + L++ + + + A V + EPD+V +SL++GY
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
+ + M ++ +P+ T L+ G+ LH + S +L+
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLF----------LH--------NKASEAVALIDR 210
Query: 249 MYSR-CKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSI 307
M +R C+ PDL T+ +++G + G+ + L +K+ + + D +
Sbjct: 211 MVARGCQ--------------PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 308 LVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLM 367
+ T++ ++ NV + + G+ +V ++LI G + M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 368 PER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLV 423
ER N+++++++I G EA +++D ++++ + PD T+S+L+ C +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 424 NEGREIFQRM--KDEFNIKARPEHYVY--MVKLLGSAGELEEAYNLTQSLPEPVDKAILG 479
+E + +F+ M KD F P Y ++K A +EE L + + +
Sbjct: 377 DEAKHMFELMISKDCF-----PNVVTYNTLIKGFCKAKRVEEGMELFREMSQR------- 424
Query: 480 ALLSCCNSCGNSELAETVAQKLFQNNPADNA---FKVMLSN 517
GN+ T+ Q LFQ D A FK M+S+
Sbjct: 425 ------GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 129/279 (46%), Gaps = 17/279 (6%)
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI 328
P +V ++ L+S ++ + + V+ ++ R D ++ + + + +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 329 HGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV----FRLMPERNIISYNSVISGLGL 384
G +++ G E D+ S+L++ Y + + + F + + N +++N++I GL L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
H ASEA + DR++ +G PD T+ ++ C G ++ + ++M ++ I+A
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVV 256
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPEP---VDKAILGALLSC-CN----SCGNSELAET 496
Y ++ L + + +A NL + + +L+ C CN S + L++
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 497 VAQKLFQNNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
+ +K+ NP F ++ + + +G+ + + L D+M
Sbjct: 317 IERKI---NPNVVTFSALI-DAFVKEGKLVEAEKLYDEM 351
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 190/487 (39%), Gaps = 91/487 (18%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS----TRSVYLWNSMIR 77
A + L + S D + T L+ +A + A +VF KM ++ +N ++
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 78 AFA-LSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
F + ++ SL M I PD YT+ +I C V A+G
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQM 192
D + +AL+ Y K EA +V N + P +V +NSLIS Y D M++
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
+ M GT+PD +T LL G + R
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSG-----------------------------------FER 396
Query: 253 CKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
++SA +F + N P++ T++A I Y G+ +++ F ++ + D +
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
T+LA Q +G++S+V S + + GF+ P
Sbjct: 457 WNTLLAVFGQ----------------NGMDSEV---SGVFKEMKRAGFV----------P 487
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGRE 428
ER ++N++IS G +A ++ R+L+ G+ PD +T++ +L A G+ + +
Sbjct: 488 ERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 429 IFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAI-------LGAL 481
+ M+D + +P Y L A E L SL E V + L L
Sbjct: 546 VLAEMEDG---RCKPNELTYCSLLHAYANGKE--IGLMHSLAEEVYSGVIEPRAVLLKTL 600
Query: 482 LSCCNSC 488
+ C+ C
Sbjct: 601 VLVCSKC 607
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 188/492 (38%), Gaps = 87/492 (17%)
Query: 74 SMIRAFALSQRFDNAVSLFR-TMLGADIKP--DNYTFACVIRACADNFDLGMLRLVHGGA 130
+ ++ ++FD A+ F M D + DN A +I + + G
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL 199
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYG-CSAA 185
G LD ++L+SA++ G EA VF + E P L+ +N +++ +G
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 186 WDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSL 245
W+ + M+ G PD YT L+ SL + +G D +
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 246 LVSMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMER 301
L+ +Y + A +V + +P +VT+++LIS Y++ G ++ +
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM---------- 369
Query: 302 KKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
E+ + G + DV + L+ + + G + +
Sbjct: 370 -------------------------ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 362 CVFRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+F M + NI ++N+ I G G +E ++FD I GL+PD T++ LL
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 418 CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAI 477
G+ +E +F+ MK AG + E +
Sbjct: 465 GQNGMDSEVSGVFKEMK--------------------RAGFVPE-------------RET 491
Query: 478 LGALLSCCNSCGNSELAETVAQKLFQN--NPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
L+S + CG+ E A TV +++ P + + +L+ + G G W+ + + +M
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG-GMWEQSEKVLAEM 550
Query: 536 TGGLRKMPGLSW 547
G K L++
Sbjct: 551 EDGRCKPNELTY 562
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 167/430 (38%), Gaps = 51/430 (11%)
Query: 57 AYHVFDKMS----TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIR 112
A VF++M + +N+++ + S R A+ + M+ P T+ +I
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 113 ACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF----NGIAEP 168
A A + L + G D + L+S + + G V A +F N +P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 169 DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLH 228
++ +N+ I YG + M++F + + G PD T LL + G+
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQC 284
++G + + L+S YSRC + A V+ + + PDL T++ +++ ++
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 285 G---EHEKVL------------LFFRKLIMERKKLDSILVATVLASIAQTANVRP----- 324
G + EKVL L + L+ I + LA + + P
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 325 --------GCEIHGYVIR-------HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE 369
C++ R G D+ ++++ +Y + + V M E
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE 657
Query: 370 R----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
R ++ +YNS++ ++ + IL KG+ PD +++ ++ A C + +
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 426 GREIFQRMKD 435
IF M++
Sbjct: 718 ASRIFSEMRN 727
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 169/411 (41%), Gaps = 26/411 (6%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
L+ YA ++ A + ++M+ + V+ + +++ F + + ++A+S+F M A
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
KP+ TF I+ + + + GL D + + L++ + + G+ E +
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 160 RVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL--- 212
VF + P+ +N+LIS Y +++ M ++ M G PD T +L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 213 --GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCK---CMDS-AYRVFCSI 266
GG+ + S + + G + L S L+ Y+ K M S A V+ +
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCS-----LLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 267 SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGC 326
P V L+ S+C + F +L D + ++++ + V
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 327 EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGL 382
+ Y+ G + ++L+ M+S+ + R + + +IISYN+VI
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
+ +A R+F + G+ PD T++ +G+ + E + + M
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 135/338 (39%), Gaps = 20/338 (5%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
+N++I A++ F+ A++++R ML A + PD T+ V+ A A V
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 132 ASGLGLDAICCSALVSAYS---KLGLVHE-ANRVFNGIAEPDLVLWNSLISGYGCSAAWD 187
+ + +L+ AY+ ++GL+H A V++G+ EP VL +L+
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
+ FS ++ G PD TL ++ ++ G+ + G + L+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 248 SMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
M+SR + + I PD+++++ +I Y + F ++
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D I T + S A + + Y+I+HG + ++++D G C
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD----------GYCK 781
Query: 364 FRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEK 401
E + + + L H E R+ +RI++K
Sbjct: 782 LNRKDEAKLFVED--LRNLDPHAPKGEDLRLLERIVKK 817
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 153/365 (41%), Gaps = 14/365 (3%)
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSA- 184
A A G G SAL+SAY + GL EA VFN + E P+LV +N++I G
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
+ + F M+ G +PD T LL + L + L ++ D +
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 245 LLVSMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
L+ + MD A+ + + P++V++S +I G+++ G ++ L F ++
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
LD + T+L+ + +I + G++ DV +AL+ Y K G
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 361 ICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
VF M N+++Y+++I G G EA +F GL D +SAL+ A
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 417 CCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKA 476
C GLV + M E I Y ++ G + ++ + + + P +
Sbjct: 559 LCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSS 617
Query: 477 ILGAL 481
L AL
Sbjct: 618 ALSAL 622
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 153/329 (46%), Gaps = 13/329 (3%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN-FDLGMLRLV 126
+VY ++++I A+ S + A+S+F +M ++P+ T+ VI AC + +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 127 HGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGC 182
+G+ D I ++L++ S+ GL A +F+ + E D+ +N+L+
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
D+ ++ + M + P+ + + ++ G A L G G+ D
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
+ L+S+Y++ + A + +++ D+VT++AL+ GY + G++++V F ++
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
E + + +T++ ++ + EI GL +DV + SALID K G +
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 359 FGICVFRLMPER----NIISYNSVISGLG 383
+ + M + N+++YNS+I G
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 10/283 (3%)
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
VG F+ R G + ++ + + I + + + G + + S L+
Sbjct: 216 VGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALI 275
Query: 248 SMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCG-EHEKVLLFFRKLIMERK 302
S Y R + A VF S+ P+LVT++A+I + G E ++V FF ++
Sbjct: 276 SAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGV 335
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
+ D I ++LA ++ + + +E DV + L+D K G +
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE 395
Query: 363 VFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
+ MP + N++SY++VI G G EA +F + G+A D +++ LL
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 419 HAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEE 461
G E +I + M IK Y ++ G G+ +E
Sbjct: 456 KVGRSEEALDILREMAS-VGIKKDVVTYNALLGGYGKQGKYDE 497
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 194/471 (41%), Gaps = 51/471 (10%)
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHG 128
+ +N++I A++ + A L M G P YT+ VI + + V
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSA 184
+ SGL D+ +L+ K G V E +VF+ + PDLV ++S++S + S
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
D + F+S++ G PD L+ G ++ + L + G D +
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 245 LLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
++ + K + A ++F ++ PD T + LI G+ + G + + F+K+ +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
R +LD + T+L + ++ EI DM SK
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWA------------------DMVSK------- 544
Query: 361 ICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
++P ISY+ +++ L G +EAFR++D ++ K + P ++++ C +
Sbjct: 545 ----EILP--TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGE--LEEAYNLTQSLPEP-----V 473
G ++G ++M E + P+ Y + G E + +A+ L + + E
Sbjct: 599 GNASDGESFLEKMISEGFV---PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 474 DKAILGALLSCCNSCGNSELAETVAQKLFQN--NPADNAFKVMLSNIYAGD 522
D ++L + AE V +K+ + NP + + M++ + D
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 166/382 (43%), Gaps = 61/382 (15%)
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDV 188
SG+G++ + +V+A K G + + + + E PD+V +N+LIS Y +
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV-GSLLV 247
++ ++M G P YT ++ G+ + + +SGL DS SLL+
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 248 SMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ +++ +VF + + PDLV +S+++S +++ G +K L++F
Sbjct: 349 EACKKGDVVETE-KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS------- 400
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
V GL D + + LI Y + G + + +
Sbjct: 401 ----------------------------VKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 364 FRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
M ++ ++++YN+++ GL EA ++F+ + E+ L PD+ T + L+ C
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 420 AGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNL------TQSLPEPV 473
G + E+FQ+MK++ I+ Y ++ G G+++ A + + LP P+
Sbjct: 493 LGNLQNAMELFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 474 DKAILGALLSCCNSCGNSELAE 495
+IL L C LAE
Sbjct: 552 SYSILVNAL-----CSKGHLAE 568
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 28/409 (6%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVY----LWNSMI 76
RAK++ A +L++ LS D L+ D+ VF M +R V ++SM+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
F S D A+ F ++ A + PDN + +I+ + + + + G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQM 192
+D + + ++ K ++ EA+++FN + E PD LI G+ M++
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
F M+ R D T LL G + + + + S+LV+
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 253 CKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
+ A+RV+ + + P ++ +++I GY + G F K+I E D I
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 309 VATVLASIAQTAN-------VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
T++ + N V+ E G GL DV ++++ + + +
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQG-----GLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 362 CVFRLMPERNI----ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPD 406
V R M ER + +Y +I+G +EAFR+ D +L++G +PD
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/443 (17%), Positives = 179/443 (40%), Gaps = 53/443 (11%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRS----VYLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
L+ Y++ + A+ + + M + VY +N++I +++ A +F ML +
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
+ PD+ T+ ++ D+ V + + D +C S+++S +++ G + +A
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 160 RVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
FN + E PD V++ LI GY V M + + M G D T +L G+
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 216 ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP----DL 271
+L L + L DS+ ++L+ + + + +A +F + D+
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 272 VTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGY 331
VT++ L+ G+ + G+ + + ++ + I + ++ ++ ++ +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 332 VIRHGLESDVKVSSALIDMYSKCG-------FLH-------------FGICVFRLMPERN 371
+I ++ V + +++I Y + G FL + ++ + E N
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 372 ---------------------IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATF 410
+ +YNS++ G EA + +++E+G+ PD +T+
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 411 SALLGACCHAGLVNEGREIFQRM 433
+ ++ + E I M
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEM 718
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 195/469 (41%), Gaps = 40/469 (8%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM----STRSVYLW 72
K LL A + K D + LV + ++ A + D+M +
Sbjct: 119 KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV 178
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVI-RACA--------DNFDLGML 123
+++I L R A+ L M+ +PD T+ V+ R C D F
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 124 RLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISG 179
R + V + +D++C K G +A +FN + + D+V ++SLI G
Sbjct: 239 RNIKASVVQYSIVIDSLC---------KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 180 YGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSD 239
WD G +M M PD T + L+ L + L+ G+ D
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 240 SHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFR 295
+ + L+ + + C+ A ++F + + PD+VT+S LI+ Y + + + FR
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 296 KLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
++ + ++I T++ Q+ + E+ ++ G+ V L+D G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 356 FLHFGICVFRLMPERNII----SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFS 411
L+ + +F M + + YN +I G+ +A+ +F + +KG+ PD T++
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 412 ALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKL---LGSAG 457
++G C G ++E +F++MK++ P+ + Y + + LG +G
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKED---GCTPDDFTYNILIRAHLGGSG 575
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 195/467 (41%), Gaps = 55/467 (11%)
Query: 54 INSAYHVFDKM-STRSVYL---WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
+N A +F+ M +R + +N + A A ++++D + + M I+ D YT
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEA----NRVFNGI 165
+I L V G A G D I S LV+ + G V EA +R+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
PDLV ++LI+G + + M G +PD T +L + LC
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL------NRLC--- 221
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
KSG +L + ++ + + + V V +S +I + G
Sbjct: 222 -------KSG------NSALALDLFRKMEERNIKASV---------VQYSIVIDSLCKDG 259
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
+ L F ++ M+ K D + ++++ + G ++ +I + DV S
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 346 ALIDMYSKCGFLHFGICVFRLMPERNI----ISYNSVISGLGLHGCASEAFRMFDRILEK 401
ALID++ K G L ++ M R I I+YNS+I G C EA +MFD ++ K
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLG--SAGEL 459
G PD T+S L+ + C A V++G +F+ + + I P Y +LG +G+L
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI---PNTITYNTLVLGFCQSGKL 436
Query: 460 EEAYNLTQSLPE---PVDKAILGALLSCCNSCGNSELAETVAQKLFQ 503
A L Q + P G LL C N EL + A ++F+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLD--GLCDNGELNK--ALEIFE 479
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 170/395 (43%), Gaps = 53/395 (13%)
Query: 57 AYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIR 112
A +F KM R SV ++ +I + FD+A+SLF M IK D T++ +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 113 A-CAD-NFDLG--MLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN----- 163
C D +D G MLR + G + D + SAL+ + K G + EA ++N
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIP----DVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 164 GIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI 223
GIA PD + +NSLI G+ QMF M G PD T + L+ +
Sbjct: 345 GIA-PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 224 GQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALIS 279
G L GL ++ + LV + + +++A +F + + P +VT+ L+
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
G GE K L F K+ Q + + G I+ +I HG+ +
Sbjct: 464 GLCDNGELNKALEIFEKM--------------------QKSRMTLGIGIYNIII-HGMCN 502
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
KV A ++ C G+ + ++++YN +I GL G SEA +F ++
Sbjct: 503 ASKVDDAW-SLF--CSLSDKGV-------KPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
E G PD T++ L+ A + E+ + MK
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 42/276 (15%)
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI 328
P + ++ L S ++ +++ VL F + + + + D + ++ + + +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 329 HGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGL 384
G + G E D S L++ + G + + + M E ++++ +++I+GL L
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
G SEA + DR++E G PD T+ +L C +G ++F++M +E NIKA
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVV 246
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQN 504
Y ++ L G ++A +L + KA +
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV-------------------------- 280
Query: 505 NPADNAFKVMLSNIYAG---DGRWDDVKNLRDKMTG 537
V S++ G DG+WDD + +M G
Sbjct: 281 --------VTYSSLIGGLCNDGKWDDGAKMLREMIG 308
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 190/429 (44%), Gaps = 46/429 (10%)
Query: 54 INSAYHVF-DKMSTR---SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
+N A +F D + +R S+ +N ++ A +++D +SL + M I+ D YTF
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE-- 167
VI F + + + G + G D + +LV+ + + V +A + + + E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 168 --PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
PD+V +N++I + + F + G RP+ T L+ G+ + S
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW---- 241
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
S LL M + I+ P+++T+SAL+ + + G
Sbjct: 242 --------------SDAARLLSDMIKK------------KIT-PNVITYSALLDAFVKNG 274
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
+ + F +++ D + ++++ + + ++ ++ G +DV +
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYN 334
Query: 346 ALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEK 401
LI+ + K + G+ +FR M +R N ++YN++I G G +A F ++
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 402 GLAPDAATFSALLGACCHAGLVNEGREIFQRM-KDEFNIKARPEHYVYMVKLLGSAGELE 460
G++PD T++ LLG C G + + IF+ M K E ++ Y +++ + G++E
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT--YTTVIRGMCKTGKVE 452
Query: 461 EAYNLTQSL 469
EA++L SL
Sbjct: 453 EAWSLFCSL 461
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 166/381 (43%), Gaps = 14/381 (3%)
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRA-CADNFDLGMLRLVH 127
+Y +N +I F + A+S+ ML +PD T ++ C N + LV
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCS 183
V G D + +A++ + K V++A F I P++V + +L++G S
Sbjct: 180 K-MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ W ++ S M P+ T + LL + + L + +D D
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISNP----DLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
S L++ +D A ++F + + D+V+++ LI+G+ + E + FR++
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 300 ERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHF 359
+++ T++ Q +V E + G+ D+ + L+ G L
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 360 GICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLG 415
+ +F M +R +I++Y +VI G+ G EA+ +F + KGL PD T++ ++
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 416 ACCHAGLVNEGREIFQRMKDE 436
C GL++E ++ +MK E
Sbjct: 479 GLCTKGLLHEVEALYTKMKQE 499
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 162/389 (41%), Gaps = 16/389 (4%)
Query: 29 LLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS----TRSVYLWNSMIRAFALSQR 84
+LK D LV + N ++ A + DKM + +N++I + ++R
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 85 FDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSA 144
++A F+ + I+P+ T+ ++ ++ + + + + I SA
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 145 LVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVG 200
L+ A+ K G V EA +F + +PD+V ++SLI+G D QMF M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 201 TRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAY 260
D + L+ G + G L + GL S++ + L+ + + +D A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 261 RVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASI 316
F + +PD+ T++ L+ G GE EK L+ F + LD + TV+ +
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 317 AQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYN 376
+T V + + GL+ D+ + ++ G LH ++ M + ++ +
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAP 405
+S G + + + ++L G AP
Sbjct: 506 CTLS----DGDITLSAELIKKMLSCGYAP 530
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 162/373 (43%), Gaps = 43/373 (11%)
Query: 54 INSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
+++A+++F++M + + ++ ++IR F + R+D+ L R M+ I PD F+
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE-- 167
+I L +H + G+ D + ++L+ + K + +AN + + +
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 168 --PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
P++ +N LI+GY + D G+++F M L G D T L+ G + L + +
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
L M SR RV PD+V++ L+ G G
Sbjct: 443 ------------------ELFQEMVSR--------RV-----RPDIVSYKILLDGLCDNG 471
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
E EK L F K+ + +LD + ++ + + V ++ + G++ DVK +
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 346 ALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEK 401
+I K G L +FR M E N +YN +I G A+++ ++ + I
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 402 GLAPDAATFSALL 414
G + DA+T ++
Sbjct: 592 GFSVDASTVKMVV 604
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 184/437 (42%), Gaps = 16/437 (3%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM----STRSVYL 71
C+ L A ++K D + L+ ++ A + D+M ++
Sbjct: 120 CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
N+++ L+ + +AV L M+ +P+ T+ V++ + + +
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWD 187
+ LDA+ S ++ K G + A +FN + + D++++ +LI G+ + WD
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
G ++ M PD + L+ L + LH + G+ D+ + L+
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 248 SMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ + +D A + + + P++ T++ LI+GY + + L FRK+ +
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D++ T++ + + E+ ++ + D+ L+D G + +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 364 FRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
F + E +I YN +I G+ +A+ +F + KG+ PD T++ ++G C
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 420 AGLVNEGREIFQRMKDE 436
G ++E +F++M+++
Sbjct: 540 KGSLSEADLLFRKMEED 556
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 199/477 (41%), Gaps = 57/477 (11%)
Query: 46 RLYAATNDI--NSAYHVFDKMSTRS-----VYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
RL + DI + A +F +M TRS + ++ + A ++++D + L + M
Sbjct: 43 RLRSGIVDIKEDDAVDLFQEM-TRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK 101
Query: 99 DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEA 158
I + YT + +I C L + G + G D + S L++ G V EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 159 NRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG 214
+ + + E P L+ N+L++G + + + M G +P+ T +L
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL-- 219
Query: 215 IADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTW 274
++C KSG + LL M R +D+ V +
Sbjct: 220 ----KVMC----------KSG--QTALAMELLRKMEERKIKLDA-------------VKY 250
Query: 275 SALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
S +I G + G + F ++ ++ K D I+ T++ G ++ +I+
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI----ISYNSVISGLGLHGCASE 390
+ DV SALID + K G L + + M +R I ++Y S+I G +
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 391 AFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMV 450
A M D ++ KG P+ TF+ L+ C A L+++G E+F++M + A Y ++
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLI 429
Query: 451 KLLGSAGELEEAYNLTQSL------PEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
+ G+LE A L Q + P+ V IL L C++ G E A + +K+
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL--LDGLCDN-GEPEKALEIFEKI 483
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 139/318 (43%), Gaps = 22/318 (6%)
Query: 227 LHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN-PDLVTW-SALISGYSQC 284
+ GL L++ + +L +S Y R VF S+S+ V++ L SG
Sbjct: 1 MRGLIQTRLLETGTLRTALFLSCYGR---------VFSSVSDGKGKVSYRERLRSGIVDI 51
Query: 285 GEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVS 344
E + V LF +++ R + I + + + +A+T ++ + G+ ++
Sbjct: 52 KEDDAVDLF-QEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 345 SALIDMYSKCGFLHFGIC----VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
S +I+ +C L + +L E + ++++++I+GL L G SEA + DR++E
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELE 460
G P T +AL+ C G V++ + RM E + Y ++K++ +G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 461 EAYNLTQSLPE---PVDKAILGALLSCCNSCGNSELAETVAQKL-FQNNPADNAFKVMLS 516
A L + + E +D ++ G+ + A + ++ + AD L
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 517 NIYAGDGRWDD-VKNLRD 533
+ GRWDD K LRD
Sbjct: 290 RGFCYAGRWDDGAKLLRD 307
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 183/426 (42%), Gaps = 19/426 (4%)
Query: 27 ACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALS 82
A ++K D + L+ Y + I+ A + D+M + + ++I L
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 83 QRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICC 142
+ AV+L M+ +PD T+ V+ D+ + + A+ + + +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 143 SALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL 198
+ ++ + K V A +F + P++V +NSLI+ W ++ S+M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS 258
P+ T L+ L + LH + +D D+ +LL++ + +D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 259 AYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
A ++F + + P++ T++ LI+G+ +C E + FR++ +++ T++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 315 SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP----ER 370
Q + + ++ + + +D+ S L+ G L + +F+ + E
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 371 NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIF 430
NI YN++I G+ G EA+ +F + + PD T++ ++ C L+ E ++F
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 431 QRMKDE 436
++MK++
Sbjct: 559 RKMKED 564
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 160/379 (42%), Gaps = 52/379 (13%)
Query: 53 DINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFA 108
DI+ A ++ +KM +V ++N++I + + + AV LF M I+P+ T+
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 109 CVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE- 167
+I + + + + + + +AL+ A+ K G + EA ++ + +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 168 ---PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
PD + +N LI+G+ D QMF M P+ T L+ G
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING---------- 407
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLV----TWSALISG 280
+ +CK ++ +F +S LV T++ +I G
Sbjct: 408 -------------------------FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 281 YSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESD 340
+ Q G+ + + F++++ R D + + +L + + I Y+ + +E +
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 341 VKVSSALIDMYSKCGFLHFG---ICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDR 397
+ + + +I+ K G + C + P+ +++YN++ISGL EA +F +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPD--VVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 398 ILEKGLAPDAATFSALLGA 416
+ E G P++ T++ L+ A
Sbjct: 561 MKEDGTLPNSGTYNTLIRA 579
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 88/479 (18%)
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACA--DNFDLGMLRLVHGGAVASGLGL--DA 139
+ D+AV LF M+ + P F ++ A A + F+L ++ G LG+ D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL----VISLGEQMQTLGISHDL 118
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
S ++ + + + A V + EPD+V +SL++GY S + +
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR-CK 254
M +G +PD +T L+ G+ LH + S +L+ M R C+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLF----------LH--------NKASEAVALVDQMVQRGCQ 220
Query: 255 CMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLA 314
PDLVT+ +++G + G+ + L K+ R K + ++ T++
Sbjct: 221 --------------PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 315 SI---------------AQTANVRPGCEIHGYVI--------------------RHGLES 339
S+ +T +RP + +I +
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNI----ISYNSVISGLGLHGCASEAFRMF 395
+V +ALID + K G L + M +R+I I+YN +I+G +H EA +MF
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 396 DRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGS 455
++ K P+ T++ L+ C V +G E+F+ M + Y +++
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-GLVGNTVTYTTIIQGFFQ 445
Query: 456 AGELEEAYNLTQSLPE---PVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAF 511
AG+ + A + + + P D LL S G + A + + L ++ N F
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 172/394 (43%), Gaps = 17/394 (4%)
Query: 39 FYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRT 94
F K+ L+ +++A M + +V +N+M+ A + D A S+F
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 95 MLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGL 154
ML ++P+N+T++ +I N D V AS + + + +++ K+G
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 155 VHEANRVF-NGIAEPDLVL----WNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLA 209
+A + N I E + +NS+I G+ D ++ + M G P+ T
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 210 GLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN- 268
L+ G + + + + L D L+ + + M +AY +F +
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 269 ---PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPG 325
P++ +++LISG+ G+ + + ++K++ + D T++ + + N+
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISG 381
+++ ++ G+ D + L++ SK G + M ++ N++ Y++VI+G
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLG 415
G +EAFR+ D +LEKG+ D F+ L+
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/455 (17%), Positives = 187/455 (41%), Gaps = 37/455 (8%)
Query: 41 ATKLVRLYAATNDINSAYHVFDKMSTRSV----YLWNSMIRAFALSQRFDNAVSLFRTML 96
AT LV Y N++ A +F++M + +++ M+ F + + A+ + M
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 97 GADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVH 156
I P + +I+ C + + S + C+ + + K G V
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVD 466
Query: 157 EANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
A + EP++V +N+++ + D+ +FS M G P+ +T + L+
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 213 GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS------MYSRCKCM------DSAY 260
G + + S +++ + + +++ S+ K M + Y
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
+ C+ +++++I G+ + G+ + + +R++ K + + +++ ++
Sbjct: 587 SMSCT-------SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE----RNIISYN 376
+ E+ + L+ D+ ALID + K + +F +PE N+ YN
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
S+ISG G A ++ +++ G++ D T++ ++ G +N +++ + D
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD- 758
Query: 437 FNIKARPEHYVYMVKL--LGSAGELEEAYNLTQSL 469
+ P+ ++MV + L G+ +A + + +
Sbjct: 759 --LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 188/408 (46%), Gaps = 12/408 (2%)
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN-FDLGMLRLVH 127
V L++++ R + +R A M + PD+ + +I N + L++
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF-NGIAEPDLVLWNSLISGYGCSAAW 186
+A G+ D + L+ ++ K+G + A + N + D V +N++ISG
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
D Q S M +G PD + L+ G + L + S L+ +H ++L
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL--VDEISELNLITH--TIL 233
Query: 247 VSMYSRCKCMDSAYR-VFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
+S Y ++ AYR + S +PD+VT+S++I+ + G+ + L R++ +
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
+ T++ S+ + R ++ ++ G+ D+ V + L+D K G L F+
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 366 LMPERN----IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG 421
++ E N +++Y +++ GL G S A + ++LEK + P+ T+S+++ G
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 422 LVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
++ E + ++M+D+ N+ Y ++ L AG+ E A L++ +
Sbjct: 414 MLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 191/489 (39%), Gaps = 90/489 (18%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV----YLWNS 74
L A++ LL+ + + T LV D++SA + +M +SV ++S
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC-------------------- 114
MI + + AVSL R M ++ P+ +T+ VI
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 115 --ADNFDL----------GMLRLVHG---GAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
+N+ L G ++ V G V+ G+ LD I ++L+ + K G A
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAAL 524
Query: 160 RVFNGIAEP----DLVLWNSLISG---YG-CSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
+ E D+V +N LISG +G A W + MR G PD
Sbjct: 525 AWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADW-----AYKGMREKGIEPD------- 572
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDL 271
IA +++ Q G DS+ ++ ++ + K C I P L
Sbjct: 573 ---IATFNIMMNSQRKQG-------DSEG-----ILKLWDKMKS--------CGI-KPSL 608
Query: 272 VTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGY 331
++ + ++ + G+ E+ + ++++ + L + ++ + H
Sbjct: 609 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 668
Query: 332 VIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGC 387
++ +G++ +V + LI K G V M R + +++NS++ G +
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728
Query: 388 ASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYV 447
+A + ++E G++P+ AT++ ++ AGL+ E + MK RP+ +
Sbjct: 729 VRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR---GMRPDDFT 785
Query: 448 YMVKLLGSA 456
Y + G A
Sbjct: 786 YNALISGQA 794
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 170/395 (43%), Gaps = 45/395 (11%)
Query: 53 DINSAYHVFDKMSTRS----VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFA 108
DI+ A+++ +KM V ++N++I + + D+A++LF+ M I+P+ T++
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 109 CVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-- 166
+I + + + + + +AL+ A+ K G EA ++ + +
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 167 --EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
+PD+ +NSLI+G+ D QMF M PD T L+ G + G
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 225 QGL-HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALIS 279
L +SH+ + +L+ ++ C D+A +VF + + PD++T+S L+
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDC-DNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
G G+ EK L F + KLD + T++ + + V G ++ + G++
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
N+++YN++ISGL EA+ + ++
Sbjct: 464 -------------------------------NVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
E G PD+ T++ L+ A G E+ + M+
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 157/377 (41%), Gaps = 12/377 (3%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
+ ++I L + AV+L M+ +P+ T+ V+ D+ + +
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWD 187
A+ + D + + ++ + K V +A +F + P++V ++SLIS W
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
Q+ S M P+ T L+ + LH K +D D + L+
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 248 SMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ + +D A ++F + + PDL T++ LI G+ + E FR++
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D++ T++ + + ++ ++ G+ D+ S L+D G L + V
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 364 FRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
F M + +I Y ++I G+ G + + +F + KG+ P+ T++ ++ C
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 420 AGLVNEGREIFQRMKDE 436
L+ E + ++MK++
Sbjct: 478 KRLLQEAYALLKKMKED 494
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 169/410 (41%), Gaps = 40/410 (9%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S+ +S++ + +R +AV+L M+ +PD TF +I + +
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCS 183
V G + + +V+ K G + A + N + E D+V++N++I
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
D + +F M G RP+ T + L+ S LC G SD+
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLI------SCLC----------SYGRWSDA--S 240
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
LL M + NP+LVT++ALI + + G+ + +I
Sbjct: 241 QLLSDMIEK-------------KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D +++ + ++ +++ D+ + LI + K + G +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 364 FRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
FR M R + ++Y ++I GL G A ++F +++ G+ PD T+S LL C+
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 420 AGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
G + + E+F M+ IK Y M++ + AG++++ ++L SL
Sbjct: 408 NGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/374 (18%), Positives = 152/374 (40%), Gaps = 39/374 (10%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S++ +N ++ A A ++FD +SL M I + YT+ +I + + +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCS 183
G + G + S+L++ Y + +A + + + E PD + + +LI G
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ + M G +P+ T ++ G+ + + L + +++D +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
+ ++ + + +D A +F + P++VT+S+LIS G +I
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 300 ERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHF 359
++ + + ++ + + ++H +I+ ++ D
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD------------------- 289
Query: 360 GICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
I +YNS+I+G +H +A +MF+ ++ K PD T++ L+ C
Sbjct: 290 ------------IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 420 AGLVNEGREIFQRM 433
+ V +G E+F+ M
Sbjct: 338 SKRVEDGTELFREM 351
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 164/377 (43%), Gaps = 47/377 (12%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
+ S++ + R ++A++LF +LG KP+ T+ +IR N L +
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWD 187
+G + + +ALV+ ++G +A + + EP+++ + +LI +
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
++++ M + PD +T L+ G+ LL + + L ++G + + + L+
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 248 SMYSRCKCMDSAYRVFCSISNPDLV----TWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ + K ++ ++F +S +V T++ LI GY G + F ++ R
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D +T NV + GL + KV AL+ +
Sbjct: 396 PD-----------IRTYNV----------LLDGLCCNGKVEKALM--------------I 420
Query: 364 FRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
F M +R NI++Y +I G+ G +AF +F + KG+ P+ T++ ++ C
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 420 AGLVNEGREIFQRMKDE 436
GL++E +F++MK++
Sbjct: 481 RGLIHEADSLFKKMKED 497
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 167/403 (41%), Gaps = 43/403 (10%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM----STRSVYLWNSMI 76
RA ++K D T L+ Y N I A +FD++ +V + ++I
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
R ++ ++AV LF M +P+ T+ ++ + G + + +
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQM 192
+ I +AL+ A+ K+G + EA ++N + + PD+ + SLI+G D QM
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 193 FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSR 252
F M G P+ L+ G + G + + G+ +++ ++L+ Y
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 253 CKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
D A VF +S+ PD+ T++ L+ G G+ EK L+ F M ++++D +
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE--YMRKREMDINI 433
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
V +I G+ KV A D++ C G+
Sbjct: 434 VTYT-------------------IIIQGMCKLGKVEDAF-DLF--CSLFSKGM------- 464
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFS 411
+ N+I+Y ++ISG G EA +F ++ E G P+ + +
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 173/409 (42%), Gaps = 19/409 (4%)
Query: 54 INSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRA 113
+N V D + +++++N++I + ++F A LF M ++P++ T++ +I
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 114 CADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN----RVFNGIAEPD 169
L G V +GL L ++L++ + K G + A + N EP
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
+V + SL+ GY + ++++ M G P YT LL G+ L+ L
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCG 285
+ + + ++++ Y M A+ ++ PD ++ LI G G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
+ + +F L +L+ I +L + + + +++ G++ D+
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 346 ALID--MYSKCGFLHFGICVFRLMPERNI----ISYNSVISGLGLHGCASEAFRMFDRIL 399
LID + K L FG+ + M +R + + Y S+I G EAF ++D ++
Sbjct: 652 VLIDGSLKHKDRKLFFGL--LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY 448
+G P+ T++A++ C AG VNE + +M+ + + P Y
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP---VSSVPNQVTY 755
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 185/444 (41%), Gaps = 51/444 (11%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTR-----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGA 98
L++ Y + + VF M T+ V ++++ + F A+ LF M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 99 DIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEA 158
I+PD Y + VIR+ + DL + + A+G ++ + + L+ K V EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 159 NRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG 214
+ +A +PD+V + +L+ G +++G++M M + P
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP----------- 330
Query: 215 IADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDS---AYRVFCSISNPDL 271
S++ V SL+ + R K ++ RV +P+L
Sbjct: 331 -----------------------SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 272 VTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGY 331
++ALI + + + L F ++ + + + + ++ + + G
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 332 VIRHGLESDVKVSSALIDMYSKCGFLH----FGICVFRLMPERNIISYNSVISGLGLHGC 387
++ GL+ V ++LI+ + K G + F + E +++Y S++ G G
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 388 ASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYV 447
++A R++ + KG+AP TF+ LL AGL+ + ++F M E+N+K Y
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYN 546
Query: 448 YMVKLLGSAGELEEAYNLTQSLPE 471
M++ G++ +A+ + + E
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTE 570
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 171/429 (39%), Gaps = 18/429 (4%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIR 77
A+ A ++ L T L+ Y + IN A ++ +M+ + S+Y + +++
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
+ +AV LF M ++KP+ T+ +I + D+ G+
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGI----AEPDLVLWNSLISGYGCSAAWDVGMQMF 193
D L+ G EA +G+ E + + + L+ G+ + + +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 194 SSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRC 253
M G D L+ G + GL H GL D + + ++ S+
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 254 KCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILV 309
A+ ++ + N P+ VT++A+I+G + G + + K+ + +
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 310 ATVLASIAQ-TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
L + + +++ E+H +++ GL ++ + LI + + G + + M
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 369 ERNI----ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
+ I+Y ++I+ L +A +++ + EKG+ PD ++ L+ CC AG +
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 425 EGREIFQRM 433
+ E+ M
Sbjct: 875 KATELRNEM 883
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 173/409 (42%), Gaps = 28/409 (6%)
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
+S R + +++ A S+ R M+G PD T++ V+ + + + L+
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDV 188
GL D + +V ++ K GL+ +A + FN + E P++V + +LI Y +
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVS 248
++F +M G P+ T + L+ G GQ + V V
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKA-----GQVEKACQIFERMCGSKDVPD--VD 624
Query: 249 MYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSIL 308
MY + + D++ R P++VT+ AL+ G+ + E+ + ME + + I+
Sbjct: 625 MYFK-QYDDNSER-------PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 309 VATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP 368
++ + + + E+ + HG + + S+LID Y K V M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 369 ER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVN 424
E N++ Y +I GL G EA+++ + EKG P+ T++A++ G +
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 425 EGREIFQRMKDEFNIKARPEHYVYMVKL--LGSAGELEEAYNLTQSLPE 471
E+ +RM + P + Y V + G L+ A+NL + + +
Sbjct: 797 TCLELLERMGSK---GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 158/411 (38%), Gaps = 50/411 (12%)
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N ++R + F A+ + +P T+ C+I+A L L+H
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEA-NRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
+ L +D + K+G EA V PD V + LISG ++ ++ M
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLL---------CIGQG-------LHGLSHKSG 235
+ MR P+ T + LL G + L + +G + L H
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 236 LDSD-SHVGSLLVSMYS------------------------RCKCMDSAYRVFCSISNPD 270
D S+ LL M C +D A + + +
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 271 LVTWSALISGYSQC----GEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGC 326
+V +S +++C G++EK R++I + D+ + VL + + +
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 327 EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE----RNIISYNSVISGL 382
+ + R GL +DV + ++D + K G + F M E N+++Y ++I
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 383 GLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
S A +F+ +L +G P+ T+SAL+ C AG V + +IF+RM
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 169/422 (40%), Gaps = 53/422 (12%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSV----YLWNSMIRAFALSQRFDNAVSLFRTMLG 97
KL+R+ D+ + DK+ R V + +N I+ D AV + ++
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 98 ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE 157
KPD T+ +I N + G V GL D+ + L++ Y K G+V
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 158 ANR-----VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
A R VFNG PD + SLI G + + +F+ G +P+ L+
Sbjct: 340 AERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 213 GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM---DSAYRVFCSISN- 268
G+++ ++ L + GL + ++LV+ + C+ D +V S
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI 328
PD+ T++ LI GYS + E L EI
Sbjct: 459 PDIFTFNILIHGYSTQLKMENAL-----------------------------------EI 483
Query: 329 HGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGL 384
++ +G++ DV ++L++ K + ++ M E+ N+ ++N ++ L
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
+ EA + + + K + PDA TF L+ C G ++ +F++M++ + + +
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 445 HY 446
Y
Sbjct: 604 TY 605
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 165/401 (41%), Gaps = 49/401 (12%)
Query: 48 YAATNDINSAYHVFDKMS----TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD 103
Y + A +VF++M +V+ +N+++ S FD A ++ M I PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 104 NYTFACVIRA-CADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF 162
Y+F +++ C + LRL++ + + G ++ + +V + + E +F
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMS-SQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 163 NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIAD----P 218
+ + L C + ++ +R++ + D LL + P
Sbjct: 205 GKMLASGVSL---------CLSTFN------KLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 219 SLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALI 278
+L + GL + LD + L+ + PD++T++ LI
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPK----------------PDVITYNNLI 293
Query: 279 SGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLE 338
G + + ++ ++ K++ E + DS T++A + V+ I G + +G
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFR------LMPERNIISYNSVISGLGLHGCASEAF 392
D +LID G + + +F + P N+I YN++I GL G EA
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP--NVILYNTLIKGLSNQGMILEAA 411
Query: 393 RMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
++ + + EKGL P+ TF+ L+ C G V++ + + M
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 148/358 (41%), Gaps = 23/358 (6%)
Query: 70 YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGG 129
+ + S+I + A++LF LG IKP+ + +I+ ++ GM+ +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ---GMI--LEAA 411
Query: 130 AVAS-----GLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGY 180
+A+ GL + + LV+ K+G V +A+ + + PD+ +N LI GY
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
+ +++ M G PD YT LL G+ S + + G +
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRK 296
++L+ R + +D A + + N PD VT+ LI G+ + G+ + FRK
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 297 LIMERKKLDSILVATVLA-SIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
+ K S ++ + + NV ++ ++ L D ++D + K G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 356 FLHFGICVFRLMPERNII----SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAAT 409
++ G M E I + VI+ L + EA + R+++KGL P+A
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 183/444 (41%), Gaps = 54/444 (12%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
+++ + A N+I+SA + M+ + ++ ++I + + R + A+ L M
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
PD TF VI + + + G D I L++ K+G V A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 160 RVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL-VGTRPDGYTLAGLLGGIADP 218
+F I +P++V++N+LI G+ D + S M G PD T L+ G
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 219 SLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF-------------- 263
L+ + + LH + +K G + + ++LV + + +D AY V
Sbjct: 403 GLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 264 --CSIS-----------------------NPDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
C IS PD+ T+++LISG + E + L R +I
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
E +++ T++ + + ++ ++ ++ G D ++LI + G +
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 359 FGICVFRLM------PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSA 412
+F M P IS N +I+GL G EA ++ +G PD TF++
Sbjct: 582 KARSLFEKMLRDGHAPSN--ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 413 LLGACCHAGLVNEGREIFQRMKDE 436
L+ C AG + +G +F++++ E
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAE 663
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 160/379 (42%), Gaps = 40/379 (10%)
Query: 54 INSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGA-DIKPDNYTFACVIR 112
+++A +F ++ + ++N++I F R D+A ++ M+ + I PD T+ +I
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 113 ACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EP 168
+G+ V G + + LV + KLG + EA V N ++ +P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 169 DLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLH 228
+ V +N LIS + +++F M G +PD YT L+ G+ +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE----------- 506
Query: 229 GLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHE 288
+D H LL M S ++ VT++ LI+ + + GE +
Sbjct: 507 -------VDEIKHALWLLRDMISEGVVANT-------------VTYNTLINAFLRRGEIK 546
Query: 289 KVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALI 348
+ +++ + LD I +++ + + V + ++R G + LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 349 DMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLA 404
+ + G + + + M R +I+++NS+I+GL G + MF ++ +G+
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 405 PDAATFSALLGACCHAGLV 423
PD TF+ L+ C G V
Sbjct: 667 PDTVTFNTLMSWLCKGGFV 685
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 203/483 (42%), Gaps = 62/483 (12%)
Query: 55 NSAYHVFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRAC 114
N Y + + +++ + +++AF D+A+SL R M P++ + +I +
Sbjct: 203 NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 115 ------------------------ADNFD---LGMLRLVHGGAVAS--------GLGLDA 139
A+ F+ LG+ + A G D
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRL- 198
I L++ K+G V A +F I +P++V++N+LI G+ D + S M
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 199 VGTRPDGYTLAGLLGGIADPSLLCIG-QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G PD T L+ G L+ + + LH + +K G + + ++LV + + +D
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKID 441
Query: 258 SAYRVFCSIS----NPDLVTWSALISGYSQCGEHE--KVLLFFRKLIMERKKLDSILVAT 311
AY V +S P+ V ++ LIS + C EH + + FR++ + K D +
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAF--CKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 312 VLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH-----FGICVFRL 366
+++ + + ++ + +I G+ ++ + LI+ + + G + VF+
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 367 MPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEG 426
P + I+YNS+I GL G +A +F+++L G AP + + L+ C +G+V E
Sbjct: 560 SP-LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 427 REIFQRMKDEFNIKARPEHYVYMVKLLG---SAGELEEAYNLTQSLPE---PVDKAILGA 480
E FQ+ E ++ V L+ AG +E+ + + L P D
Sbjct: 619 VE-FQK---EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 481 LLS 483
L+S
Sbjct: 675 LMS 677
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 39/315 (12%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSVYL----WNSMIRAFALSQRFDNAVSLFRTMLG 97
T LV + I+ AY+V ++MS + +N +I AF R AV +FR M
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 98 ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE 157
KPD YTF +I + ++ + ++ G+ + + + L++A+ + G + E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 158 ANRVFNGI----AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLG 213
A ++ N + + D + +NSLI G + D +F M G P + L+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 214 GIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVT 273
G LC +SG+ ++ ++ + S PD+VT
Sbjct: 608 G------LC----------RSGMVEEA---------------VEFQKEMVLRGSTPDIVT 636
Query: 274 WSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVI 333
+++LI+G + G E L FRKL E D++ T+++ + + V C + I
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
Query: 334 RHGLESDVKVSSALI 348
G + + S L+
Sbjct: 697 EDGFVPNHRTWSILL 711
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 160/382 (41%), Gaps = 13/382 (3%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S+ NS++ F R AV+L M+ +PD TF ++ + +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEA----NRVFNGIAEPDLVLWNSLISGYGCS 183
V G D + A+++ K G A N++ G E D+V++N++I G
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
D +F+ M G +PD +T L+ + + L + ++ D
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISN-----PDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
+ L+ + + + A +++ + PD+V ++ LI G+ + E+ + FR++
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
+++ T++ Q + + ++ G+ D+ + L+D G +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 359 FGICVFRLMPERN----IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
+ VF M +R+ I++Y ++I L G + + +F + KG+ P+ T++ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 415 GACCHAGLVNEGREIFQRMKDE 436
C GL E +F MK++
Sbjct: 504 SGFCRKGLKEEADALFVEMKED 525
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 178/416 (42%), Gaps = 16/416 (3%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S+ ++ ++ A A +FD +SL M I + YT++ I L + +
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCS 183
G + G G + ++L++ + + EA + + + E PD V + +L+ G
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ + M + G +PD T ++ G+ + L K +++D +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
+ ++ + K MD A+ +F + PD+ T++ LIS G ++
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 300 ERKKLDSILVATVLASIAQTANVRPGCEIHGYVI--RHGLESDVKVSSALIDMYSKCGFL 357
+ D + ++ + + + +++ ++ +H DV + LI + K +
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF-PDVVAYNTLIKGFCKYKRV 372
Query: 358 HFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSAL 413
G+ VFR M +R N ++Y ++I G A +F +++ G+ PD T++ L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 414 LGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
L C+ G V +F+ M+ ++K Y M++ L AG++E+ ++L SL
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKR-DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 148/367 (40%), Gaps = 36/367 (9%)
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
P +V ++ L+S +D+ + + M+ +G + YT + + S L + +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS----------NPDLVTWSAL 277
G K G G +V++ S R+ +++ PD VT++ L
Sbjct: 133 LGKMMKLGY------GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 186
Query: 278 ISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGL 337
+ G Q + + + +++++ + D + V+ + + + + + +
Sbjct: 187 VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 246
Query: 338 ESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFR 393
E+DV + + +ID K + +F M + ++ +YN +IS L +G S+A R
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 394 MFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLL 453
+ +LEK + PD F+AL+ A G + E +++ M + Y ++K
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 454 GSAGELEEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNA--- 510
+EE + + + + GN+ T+ FQ DNA
Sbjct: 367 CKYKRVEEGMEVFREMSQR-------------GLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 511 FKVMLSN 517
FK M+S+
Sbjct: 414 FKQMVSD 420
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 125/295 (42%), Gaps = 17/295 (5%)
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPS----LLCIGQGLHGLSHKSGLDSDSHV 242
D + +F M P + LL IA + ++ +G+ + L G+ + +
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL----GISHNLYT 112
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
S+ ++ + R + A + + P +VT ++L++G+ + + +++
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
+ D++ T++ + Q + ++ G + D+ A+I+ K G
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 359 FGICVFRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
+ + M E +++ YN++I GL + +AF +F+++ KG+ PD T++ L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 415 GACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
C+ G ++ + M ++ NI + ++ G+L EA L +
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 196/472 (41%), Gaps = 55/472 (11%)
Query: 16 CKSLLRAKQLH--ACLLKTHLSQDPFYATKLVRLYAATNDINSAYHV---FDKMSTRSVY 70
C+S + LH +++ + D TKL++ + +I A V +K V+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
+N++I F R D+A + M D PD T+ +I + L + V
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI----AEPDLVLWNSLISGYGCSAAW 186
++ I + L+ A G V EA ++ + + +PD+ +N++I G
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
D +M ++ L G PD + LL + + QG K L+
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRAL-------LNQGKWEEGEK-----------LM 321
Query: 247 VSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL-- 304
M+S KC +P++VT+S LI+ + G+ E+ + + +M+ K L
Sbjct: 322 TKMFSE-KC------------DPNVVTYSILITTLCRDGKIEEAMNLLK--LMKEKGLTP 366
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
D+ ++A+ + + E +I G D+ + ++ K G + +F
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Query: 365 RLMPE----RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
+ E N SYN++ S L G A M ++ G+ PD T+++++ C
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Query: 421 GLVNEGREIFQRMKD-EFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSL 469
G+V+E E+ M+ EF+ P Y + LLG A +E+A N+ +S+
Sbjct: 487 GMVDEAFELLVDMRSCEFH----PSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 14/258 (5%)
Query: 225 QGLHGLSH--KSGLDSDSHVGSLLVSMYSRCKCMDSAYRV---FCSISNPDLVTWSALIS 279
+ LH L + G + D + + L+ + + + A RV PD+ ++ALI+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALIN 166
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
G+ + + ++ + D++ ++ S+ + ++ ++ +
Sbjct: 167 GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQP 226
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMF 395
V + LI+ G + + + M R ++ +YN++I G+ G AF M
Sbjct: 227 TVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV 286
Query: 396 DRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY--MVKLL 453
+ KG PD +++ LL A + G EG ++ +M F+ K P Y ++ L
Sbjct: 287 RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM---FSEKCDPNVVTYSILITTL 343
Query: 454 GSAGELEEAYNLTQSLPE 471
G++EEA NL + + E
Sbjct: 344 CRDGKIEEAMNLLKLMKE 361
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 162/383 (42%), Gaps = 20/383 (5%)
Query: 70 YLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFD----LGMLRL 125
+ +N++I R AV+L M+ +PD T+ V+ D L +L+
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 126 VHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF----NGIAEPDLVLWNSLISGYG 181
+ G + G+ + + ++ A V++A +F N P++V +NSLI
Sbjct: 247 MEQGKIEPGV----VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 182 CSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSH 241
W ++ S M P+ T + L+ L + L+ K +D D
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 242 VGSLLVSMYSRCKCMDSAYRVF-CSISN---PDLVTWSALISGYSQCGEHEKVLLFFRKL 297
S L++ + +D A +F IS P++VT++ LI G+ + ++ + FR++
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 298 IMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFL 357
+++ T++ Q + ++ G+ D+ S L+D G +
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 358 HFGICVFRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSAL 413
+ VF + E +I +YN +I G+ G + + +F + KG+ P+ T++ +
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 414 LGACCHAGLVNEGREIFQRMKDE 436
+ C GL E +F+ MK+E
Sbjct: 543 MSGFCRKGLKEEADALFREMKEE 565
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 168/399 (42%), Gaps = 86/399 (21%)
Query: 84 RFDNAVSLFRTMLGADIKPDNYTFACVIRACA--DNFDLGMLRLVHGGAVASGLGL--DA 139
+ D+AV+LF M+ + P F+ ++ A A + FDL ++ G LG+ +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL----VISLGEQMQNLGISHNL 116
Query: 140 ICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
S L++ + + + A V + EPD+V NSL++G+ + +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
M +G +PD +T L+ G+ H ++ + V ++V C+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGL--------------FRHNRASEAVALVDRMVVK---GCQ- 218
Query: 256 MDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDS--ILVATVL 313
PDLVT+ +++G + G+ + L +K ME+ K++ ++ T++
Sbjct: 219 -------------PDLVTYGIVVNGLCKRGDIDLALSLLKK--MEQGKIEPGVVIYNTII 263
Query: 314 ASIAQTANV---------------RPGCEIHGYVIR--------------------HGLE 338
++ NV RP + +IR +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 339 SDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRM 394
+V SALID + K G L ++ M +R +I +Y+S+I+G +H EA M
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 395 FDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
F+ ++ K P+ T++ L+ C A V+EG E+F+ M
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 154/390 (39%), Gaps = 70/390 (17%)
Query: 53 DINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFA 108
++N A ++F +M + +V +NS+IR R+ +A L M+ I P+ TF+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 109 CVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE- 167
+I A L ++ + + D S+L++ + + EA +F +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 168 ---PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
P++V +N+LI G+ + D GM++F M + GL+G + L
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREM----------SQRGLVGNTVTYTTL--- 437
Query: 225 QGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQC 284
+HG D+ V +VS D PD++T+S L+ G
Sbjct: 438 --IHGFFQARECDNAQIVFKQMVS--------DGVL--------PDIMTYSILLDGLCNN 479
Query: 285 GEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVS 344
G+ E L+ F L + + D ++ + + V G ++ + G++
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP----- 534
Query: 345 SALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLA 404
N+++Y +++SG G EA +F + E+G
Sbjct: 535 --------------------------NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 405 PDAATFSALLGACCHAGLVNEGREIFQRMK 434
PD+ T++ L+ A G E+ + M+
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/481 (20%), Positives = 195/481 (40%), Gaps = 99/481 (20%)
Query: 54 INSAYHVF-DKMSTR---SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
++ A ++F D + +R S+ ++ ++ A A +FD +SL M I + YT++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPD 169
+I L + A+++ KLG EPD
Sbjct: 122 LINCFCRRSQLSL-------------------ALAVLAKMMKLGY------------EPD 150
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHG 229
+V NSL++G+ + + M +G +PD +T L+ G+
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL-------------- 196
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEK 289
H ++ + V ++V C+ PDLVT+ +++G + G+ +
Sbjct: 197 FRHNRASEAVALVDRMVV---KGCQ--------------PDLVTYGIVVNGLCKRGDIDL 239
Query: 290 VLLFFRKLIMERKKLDS--ILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSAL 347
L +K ME+ K++ ++ T++ ++ NV + + G+ +V ++L
Sbjct: 240 ALSLLKK--MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 348 IDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGL 403
I G + M ER N+++++++I G EA +++D ++++ +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 404 APDAATFSALLGACCHAGLVNEGREIFQRM--KDEFNIKARPEHYVY--MVKLLGSAGEL 459
PD T+S+L+ C ++E + +F+ M KD F P Y ++K A +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-----PNVVTYNTLIKGFCKAKRV 412
Query: 460 EEAYNLTQSLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNA---FKVMLS 516
+E L + + + GN+ T+ FQ DNA FK M+S
Sbjct: 413 DEGMELFREMSQR-------------GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 517 N 517
+
Sbjct: 460 D 460
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 169/376 (44%), Gaps = 43/376 (11%)
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDL--GMLRLV 126
V +++++I + + D+A++LF M I+PD +T++ +I +C N+ RL+
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI-SCLCNYGRWSDASRLL 298
Query: 127 HGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGC 182
+ + + + ++L+ A++K G + EA ++F+ + + P++V +NSLI+G+
Sbjct: 299 -SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
D Q+F+ M PD T L+ G + G L + GL ++
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
+ L+ + + D+A VF + +P+++T++ L+ G + G+ EK ++ F L
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
+ + D + + + V G ++ + G++ DV
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV----------------- 520
Query: 359 FGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACC 418
I+YN++ISG G EA+ +F ++ E G PD+ T++ L+ A
Sbjct: 521 --------------IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 419 HAGLVNEGREIFQRMK 434
G E+ + M+
Sbjct: 567 RDGDKAASAELIKEMR 582
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 178/421 (42%), Gaps = 23/421 (5%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S+ NS++ F R AV+L M+ +PD TF ++ + +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEA----NRVFNGIAEPDLVLWNSLISGYGCS 183
V G D + A+++ K G A N++ G E D+V+++++I
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
D + +F+ M G RPD +T + L+ + + L + ++ +
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 244 SLLVSMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
+ L+ +++ + A ++F + +P++VT+++LI+G+ ++ F ++
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 300 ERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHF 359
+ D + T++ + V G E+ + R GL + + LI GF
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH-----GFFQA 428
Query: 360 GIC-----VFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATF 410
C VF+ M NI++YN+++ GL +G +A +F+ + + + PD T+
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 411 SALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLP 470
+ + C AG V +G ++F + + +K Y M+ G EEAY L +
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 471 E 471
E
Sbjct: 548 E 548
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 171/407 (42%), Gaps = 28/407 (6%)
Query: 52 NDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTF 107
N I+ A + D+M + +++ + AV+L M+ +PD T+
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 108 ACVI----RACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF- 162
VI + + L +L + G + + D + S ++ + K V +A +F
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEA----DVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 163 ---NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPS 219
N PD+ ++SLIS W ++ S M P+ T L+ A
Sbjct: 265 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 220 LLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWS 275
L + L + +D + + L++ + +D A ++F + + PD+VT++
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 276 ALISGYSQCGEHEKVLLFFRKLIMERKKL--DSILVATVLASIAQTANVRPGCEIHGYVI 333
LI+G+ + + + FR M R+ L +++ T++ Q ++ + ++
Sbjct: 385 TLINGFCKAKKVVDGMELFRD--MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 334 RHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP----ERNIISYNSVISGLGLHGCAS 389
G+ ++ + L+D K G L + VF + E +I +YN + G+ G
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 390 EAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+ + +F + KG+ PD ++ ++ C GL E +F +MK++
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 171/413 (41%), Gaps = 57/413 (13%)
Query: 40 YATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTM 95
Y KL R ++ A +F +M S+ ++ ++ A A ++FD +S M
Sbjct: 32 YREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM 91
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLV 155
+ + YT+ +I L + G + G G + ++L++ + +
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 156 HEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
EA + + + E PD V + +L+ G + + M + G +PD T +
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN--- 268
+ G+ + L K +++D + S ++ + + +D A +F + N
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 269 -PDLVTWSALIS---GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRP 324
PD+ T+S+LIS Y + + ++L ++ERK
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLL----SDMLERK---------------------- 305
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVIS 380
+ +V ++LID ++K G L +F M +R NI++YNS+I+
Sbjct: 306 ------------INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
G +H EA ++F ++ K PD T++ L+ C A V +G E+F+ M
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 48/337 (14%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRS----VYLWNSMIR 77
A +L + +L+ ++ + L+ +A + A +FD+M RS + +NS+I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGL 137
F + R D A +F M+ D PD T+ +I V G+
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING-----------FCKAKKVVDGM-- 400
Query: 138 DAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMR 197
L S+ GLV V + +LI G+ ++ D +F M
Sbjct: 401 ------ELFRDMSRRGLVGNT------------VTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 198 LVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD 257
G P+ T LL G+ L + KS ++ D + +++ + ++
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 258 SAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVL 313
+ +FCS+S PD++ ++ +ISG+ + G E+ F K+ + DS T++
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 314 ---------ASIAQTANVRPGCEIHGYVIRHGLESDV 341
A+ A+ C G +GL +D+
Sbjct: 563 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 169/424 (39%), Gaps = 72/424 (16%)
Query: 31 KTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFD 86
+TH+ D + ++ + A ++F +M + +V+ +N MI F R+
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 87 NAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALV 146
+A L R M+ +I PD TF +I A L + + + D + ++++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 147 SAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGY 206
+ K +A +F+ +A PD+V +N++I Y + D GMQ+ + G +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 207 TLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI 266
T L+ G + +D+ + L M S C
Sbjct: 469 TYNTLIHGFCE------------------VDNLNAAQDLFQEMISHGVC----------- 499
Query: 267 SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGC 326
PD +T + L+ G+ + + E+ L F + M + LD++ ++ + + + V
Sbjct: 500 --PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 327 EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHG 386
++ + HG+E DV+ +YN +ISG
Sbjct: 558 DLFCSLPIHGVEPDVQ-------------------------------TYNVMISGFCGKS 586
Query: 387 CASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK------DEFNIK 440
S+A +F ++ + G PD +T++ L+ C AG +++ E+ M+ D F IK
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Query: 441 ARPE 444
E
Sbjct: 647 MAEE 650
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/577 (18%), Positives = 224/577 (38%), Gaps = 117/577 (20%)
Query: 2 LTQIQWLHSEL-----SNVCKSLLRAKQLHACLLKTHLSQDPFYA----TKLVRLYAATN 52
LTQ+ + EL S+ KSL A ++++ PFY K++ ++ N
Sbjct: 65 LTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSR----PFYTAVDCNKVIGVFVRMN 120
Query: 53 DINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFA 108
+ A ++ KM R ++Y +N +I+ F + ++S F + +PD TF
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 109 CVIRA-CADN-----------------------FD----LGML----------------- 123
++ C ++ FD +G+
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 124 RLVHGGA-----VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWN 174
R++ A V GL +D + +V+ K+G A + + + E PD+V+++
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 175 SLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA------------------ 216
++I +FS M G P+ +T ++ G
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 217 --DPSLLCIGQGLHGLSHKSG--LDSDSHVGSLL------------VSMYSRCKC--MDS 258
+P +L L S K G +++ +L +Y CK D
Sbjct: 361 EINPDVLTF-NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A +F +++PD+VT++ +I Y + ++ + R++ ++ T++ +
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI----IS 374
N+ ++ +I HG+ D + L+ + + L + +F ++ I ++
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
YN +I G+ EA+ +F + G+ PD T++ ++ C +++ +F +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 435 DEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSL 469
D + P++ Y + G AGE++++ L +
Sbjct: 600 DNGH---EPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 177/444 (39%), Gaps = 80/444 (18%)
Query: 31 KTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFD 86
+TH+ D + ++ + A ++F +M + +V+ +N MI F R+
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 87 NAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALV 146
+A L R M+ +I PD TF +I A L + + + D + ++++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 147 SAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGY 206
+ K +A +F+ +A PD+V +N++I Y + D GMQ+ + G +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 207 TLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI 266
T L+ G + L Q L M S C
Sbjct: 469 TYNTLIHGFCEVDNLNAAQ------------------DLFQEMISHGVC----------- 499
Query: 267 SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGC 326
PD +T + L+ G+ + + E+ L F + M + LD++ ++ + + + V
Sbjct: 500 --PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 327 EIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHG 386
++ + HG+E DV+ +YN +ISG
Sbjct: 558 DLFCSLPIHGVEPDVQ-------------------------------TYNVMISGFCGKS 586
Query: 387 CASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK------DEFNIK 440
S+A +F ++ + G PD +T++ L+ C AG +++ E+ M+ D F IK
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Query: 441 ARPEHYVYMVKLLGSAGELEEAYN 464
MV L + G L+++++
Sbjct: 647 --------MVADLITDGRLDKSFS 662
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/577 (18%), Positives = 224/577 (38%), Gaps = 117/577 (20%)
Query: 2 LTQIQWLHSEL-----SNVCKSLLRAKQLHACLLKTHLSQDPFYA----TKLVRLYAATN 52
LTQ+ + EL S+ KSL A ++++ PFY K++ ++ N
Sbjct: 65 LTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSR----PFYTAVDCNKVIGVFVRMN 120
Query: 53 DINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFA 108
+ A ++ KM R ++Y +N +I+ F + ++S F + +PD TF
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 109 CVIRA-CADN-----------------------FD----LGML----------------- 123
++ C ++ FD +G+
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 124 RLVHGGA-----VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWN 174
R++ A V GL +D + +V+ K+G A + + + E PD+V+++
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 175 SLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIA------------------ 216
++I +FS M G P+ +T ++ G
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 217 --DPSLLCIGQGLHGLSHKSG--LDSDSHVGSLL------------VSMYSRCKC--MDS 258
+P +L L S K G +++ +L +Y CK D
Sbjct: 361 EINPDVLTF-NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 259 AYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
A +F +++PD+VT++ +I Y + ++ + R++ ++ T++ +
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI----IS 374
N+ ++ +I HG+ D + L+ + + L + +F ++ I ++
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
YN +I G+ EA+ +F + G+ PD T++ ++ C +++ +F +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 435 DEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSL 469
D + P++ Y + G AGE++++ L +
Sbjct: 600 DNGH---EPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 180/477 (37%), Gaps = 64/477 (13%)
Query: 54 INSAYHVFDKM-STRSVYLW---NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
++ A FD M +R Y N +I F R D A+SL+R M I + Y+F
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPD 169
+I+ D L G G D + + L+ + EA +F
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199
Query: 170 LVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGG------IADPSLLC- 222
GY + + +F M +G P T L+ G + + + L
Sbjct: 200 ---------GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 223 --IGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMD--SAYRVFCSIS----NPDLVTW 274
+G+GLH +D ++ G+++ M CK D SA + + PD+V +
Sbjct: 251 KMVGKGLH-------IDVVTY-GTIVNGM---CKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 275 SALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIR 334
SA+I + G H F +++ + + ++ + +I
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 335 HGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASE 390
+ DV +ALI K G L + M R + ++YNS+I G H +
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 391 AFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMV 450
A MFD + +PD TF+ ++ C A V+EG ++ + + + A Y ++
Sbjct: 420 AKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLI 474
Query: 451 KLLGSAGELEEAYNLTQSLPEPVDKAILGALLSC----CNSCGNSELAETVAQKLFQ 503
L A +L Q E + + ++C C N +L E A +LF+
Sbjct: 475 HGFCEVDNLNAAQDLFQ---EMISHGVCPDTITCNILLYGFCENEKLEE--ALELFE 526
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/523 (19%), Positives = 208/523 (39%), Gaps = 54/523 (10%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMST----RSVYLWNSMIRAFALSQRFDNAVSLFRTMLG 97
T L+ ++A N + +F +M +V+L+ ++IR FA R D+A+SL M
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 98 ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE 157
+ + D + I + + M A+GL D + ++++ K + E
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 158 ANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLG 213
A +F + + P +N++I GYG + +D + R G+ P +L
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 214 -----GIADPSLLCIGQ-----------------------------GLHGLSHKSGLDSD 239
G D +L + L K+GL +
Sbjct: 352 CLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Query: 240 SHVGSLLVSMYSRCKCMDSAYRVF----CSISNPDLVTWSALISGYSQCGEHEKVLLFFR 295
+++V + + +D A +F + PD +T+ +LI G + G + +
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 296 KLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCG 355
K++ + +SI+ +++ + G +I+ +I D+++ + +D K G
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 356 FLHFGICVFRLMPERNII----SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFS 411
G +F + R + SY+ +I GL G A+E + +F + E+G D ++
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 412 ALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNL---TQS 468
++ C G VN+ ++ + MK + + Y ++ L L+EAY L +S
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 469 LPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQNNPADNAF 511
++ I +L+ G + A + ++L Q N +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/442 (17%), Positives = 176/442 (39%), Gaps = 51/442 (11%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
L+ + +++A+ + D M +V N M+ SQ+ D A ++F M
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
PD TF +I + V+ + S ++I ++L+ + G + +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 160 RVF----NGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
+++ N PDL L N+ + + + G MF ++ PD + + L+ G+
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 216 ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDL 271
L + G D+ ++++ + +C ++ AY++ + P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 272 VTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGY 331
VT+ ++I G ++ ++ + F + +R +L+ ++ ++++ + + I
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 332 VIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE---------------------- 369
+++ GL ++ ++L+D K ++ + F+ M E
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 370 -----------------RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSA 412
+ ISY ++ISGL G +EA +FDR G PD+A ++A
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 413 LLGACCHAGLVNEGREIFQRMK 434
++ + + +F+ +
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETR 824
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 336 GLESDVKVSSALIDMYSKCGFLHFGICVFRLMP----ERNIISYNSVISGLGLHGCASEA 391
G E V + + LI ++K G + + + M + +I+ YN I G G A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 392 FRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY--M 449
++ F I GL PD T+++++G C A ++E E+F+ ++ + P Y Y M
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV---PCTYAYNTM 314
Query: 450 VKLLGSAGELEEAYNLTQ------SLPEPVDKAILGALLSCCNSCGNSELAETVAQKLFQ 503
+ GSAG+ +EAY+L + S+P + +L+C G + A V +++ +
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVI---AYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 504 NNPADNAFKVMLSNIYAGDGRWDDVKNLRDKM 535
+ + + +L ++ G+ D LRD M
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 149/382 (39%), Gaps = 26/382 (6%)
Query: 54 INSAYHVFDKM-----STRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPD----N 104
++ AY V++KM T S+ ++ S+I+ F R ++ +++ M+ + PD N
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSI-VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 105 YTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNG 164
C+ +A M + A DA S L+ K G +E +F
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIK----ARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 165 IAEPDLVL----WNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSL 220
+ E VL +N +I G+ + Q+ M+ G P T ++ G+A
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 221 LCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSA 276
L L + ++ + + S L+ + + +D AY + + P+L TW++
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 277 LISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG 336
L+ + E + L+ F+ + + + + ++ + + + + G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 337 LESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIIS----YNSVISGLGLHGCASEAF 392
++ + +I +K G + +F + YN++I GL A +AF
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 393 RMFDRILEKGLAPDAATFSALL 414
+F+ +GL T LL
Sbjct: 818 SLFEETRRRGLPIHNKTCVVLL 839
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 155/372 (41%), Gaps = 44/372 (11%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
+ ++I AF+ D ++LF+ M +P + F +IR A G V
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE-----------GRV 219
Query: 132 ASGLG-LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGM 190
S L LD + S+L + D+VL+N I +G D+
Sbjct: 220 DSALSLLDEMKSSSL---------------------DADIVLYNVCIDSFGKVGKVDMAW 258
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
+ F + G +PD T ++G + + L + K+ ++ + ++ Y
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 251 SRCKCMDSAY----RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDS 306
D AY R S P ++ ++ +++ + G+ ++ L F + M++ +
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE--MKKDAAPN 376
Query: 307 ILVATVLAS-IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
+ +L + + + E+ + + GL +V+ + ++D K L +F
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 366 LMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG 421
M + + I++ S+I GLG G +A+++++++L+ ++ +++L+ + G
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 422 LVNEGREIFQRM 433
+G +I++ M
Sbjct: 497 RKEDGHKIYKDM 508
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 169/395 (42%), Gaps = 45/395 (11%)
Query: 53 DINSAYHVFDKMSTRS----VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFA 108
D + A ++ +KM V ++N++I + + D+A++LF+ M I+P+ T++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 109 CVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA-- 166
+I + + + + + +AL+ A+ K G EA ++++ +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 167 --EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIG 224
+PD+ +NSL++G+ D QMF M PD T L+ G + G
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 225 QGL-HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALIS 279
L +SH+ + +L+ ++ C D+A +VF + + PD++T+S L+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDC-DNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 280 GYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLES 339
G G+ EK L F + KLD + T++ + + V G ++ + G++
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 340 DVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRIL 399
N+++YN++ISGL EA+ + ++
Sbjct: 539 -------------------------------NVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
E G P++ T++ L+ A G E+ + M+
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 157/377 (41%), Gaps = 12/377 (3%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
+ ++I L + AV+L M+ +P+ T+ V+ D + +
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWD 187
A+ + D + + ++ + K V +A +F + P++V ++SLIS W
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
Q+ S M P+ T L+ + L+ K +D D + LV
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 248 SMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ + +D A ++F + + PD+VT++ LI G+ + E FR++
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D++ T++ + + ++ ++ G+ D+ S L+D G L + V
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 364 FRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
F M + +I Y ++I G+ G + + +F + KG+ P+ T++ ++ C
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 420 AGLVNEGREIFQRMKDE 436
L+ E + ++MK++
Sbjct: 553 KRLLQEAYALLKKMKED 569
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/493 (19%), Positives = 196/493 (39%), Gaps = 51/493 (10%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S+ +N ++ A A ++FD +SL M +I YT+ +I + + +
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCS 183
G + G + S+L++ Y + +A + + + E PD + + +LI G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ + M G +P+ T ++ G+ + L + +++D +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 244 SLLVSMYSRCKCMDSAYRVF----------------------CSIS-------------- 267
+ ++ + + +D A +F CS
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 268 ---NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRP 324
NP+LVT++ALI + + G+ + + +I D +++ +
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 325 GCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVIS 380
++ +++ DV + LI + K + G +FR M R + ++Y ++I
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 381 GLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIK 440
GL G A ++F +++ G+ PD T+S LL C+ G + + E+F M+ IK
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIK 502
Query: 441 ARPEHYVYMVKLLGSAGELEEAYNLTQSLP-EPVDKAILGALLSCCNSCGNSELAETVA- 498
Y M++ + AG++++ ++L SL + V ++ C L E A
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 499 -QKLFQNNPADNA 510
+K+ ++ P N+
Sbjct: 563 LKKMKEDGPLPNS 575
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 154/385 (40%), Gaps = 38/385 (9%)
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
P +V +N L+S +DV + + M+ + YT L+ S + + L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQ 283
G K G + S L++ Y K + A + + PD +T++ LI G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 284 CGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKV 343
+ + + +++ + + + V+ + + + + + +E+DV +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 344 SSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRIL 399
+ +ID K + + +F+ M + N+++Y+S+IS L +G S+A ++ ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY--------MVK 451
EK + P+ TF+AL+ A G E +++ M P+ + Y M
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM---IKRSIDPDIFTYNSLVNGFCMHD 379
Query: 452 LLGSAGELEEAYNLTQSLPEPV----------------DKAILGALLSCCNSCGNSELAE 495
L A ++ E P+ V D L +S G++
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 496 TVAQKLFQNNPADNA---FKVMLSN 517
T+ Q LF + DNA FK M+S+
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSD 464
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 181/419 (43%), Gaps = 74/419 (17%)
Query: 54 INSAYHVFDKMS----TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
+++A+++F++M T ++ +N +I F + R+D+ L R M+ I P+ TF+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA--- 166
+I + L +H + G+ D I ++L+ + K + +AN++ + +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 167 -EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
+P++ +N LI+GY + D G+++F M L G D T L+ G + L + +
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCG 285
L M SR P++VT+ L+ G G
Sbjct: 459 ------------------ELFQEMVSR-------------KVPPNIVTYKILLDGLCDNG 487
Query: 286 EHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSS 345
E EK L F K+ + +LD I+ +I HG+ + KV
Sbjct: 488 ESEKALEIFEKIEKSKMELD--------------------IGIYNIII-HGMCNASKVDD 526
Query: 346 ALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAP 405
A D++ C G+ + + +YN +I GL G SEA +F ++ E G AP
Sbjct: 527 AW-DLF--CSLPLKGV-------KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 406 DAATFSALLGACCHAGLVNEGREIFQRMKD-EFNIKARPEHYVYMVKLLGSAGELEEAY 463
D T++ L+ A G + ++ + +K F++ A + MV + S G L++++
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA---STIKMVIDMLSDGRLKKSF 632
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 189/460 (41%), Gaps = 53/460 (11%)
Query: 61 FDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACA--DNF 118
F S R++ + +R+ + + D+A+ LFR M+ + P F+ + A A +
Sbjct: 46 FSAFSDRNLS-YRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 119 DLGM-------LRLVHGGAVASGLGLDAIC-CSALVSAYSKLGLV----HEANRV----- 161
DL + L+ + + ++ C C L A+S +G + +E N +
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 162 FNGIA--------------------EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGT 201
NG+ +PDL+ N+L++G S M + M G
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 202 RPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYR 261
+P+ T +L + + L + + D+ S+++ + +D+A+
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 262 VFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIA 317
+F + +++T++ LI G+ G + R +I + + + + ++ S
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 318 QTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER----NII 373
+ +R E+H +I G+ D ++LID + K L + LM + NI
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 374 SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
++N +I+G + +F ++ +G+ D T++ L+ C G +N +E+FQ M
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 434 KDEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSLPE 471
+ K P Y + L G GE E+A + + + +
Sbjct: 465 ---VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 194/476 (40%), Gaps = 55/476 (11%)
Query: 46 RLYAATNDI--NSAYHVF-DKMSTR---SVYLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
RL + DI + A +F D + +R +V ++ + A A ++++D ++L + M
Sbjct: 59 RLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 100 IKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEAN 159
I + YT + +I L + G + G + I S L++ G V EA
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 160 RVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGI 215
+ + + E PDL+ N+L++G S M + M G +P+ T +L +
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 216 ADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS----NPDL 271
+ L + + D+ S+++ + +D+A+ +F + ++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 272 VTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGY 331
+T++ LI G+ G + R +I + + + + ++ S + +R E+H
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 332 VIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEA 391
+I G+ D I+Y S+I G +A
Sbjct: 359 MIHRGIAPDT-------------------------------ITYTSLIDGFCKENHLDKA 387
Query: 392 FRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVK 451
+M D ++ KG P+ TF+ L+ C A +++G E+F++M + A Y +++
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQ 446
Query: 452 LLGSAGELEEAYNLTQSL------PEPVDKAILGALLSCCNSCGNSELAETVAQKL 501
G+L A L Q + P V IL L C++ G SE A + +K+
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL--LDGLCDN-GESEKALEIFEKI 499
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/459 (18%), Positives = 188/459 (40%), Gaps = 19/459 (4%)
Query: 16 CKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM----STRSVYL 71
C+ L A ++K + + L+ ++ A + D+M +
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV 131
N+++ LS + A+ L M+ +P+ T+ V+ + + +
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 132 ASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWD 187
+ LDA+ S ++ K G + A +FN + +++ +N LI G+ + WD
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
G ++ M P+ T + L+ L + LH G+ D+ + L+
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 248 SMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ + +D A ++ + +P++ T++ LI+GY + + L FRK+ +
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
D++ T++ + + E+ ++ + ++ L+D G + +
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 364 FRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
F + E +I YN +I G+ +A+ +F + KG+ P T++ ++G C
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 420 AGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGE 458
G ++E +F++M+++ + P+ + Y + + G+
Sbjct: 556 KGPLSEAELLFRKMEEDGH---APDGWTYNILIRAHLGD 591
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 17/285 (5%)
Query: 261 RVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTA 320
R F + S+ +L L SG + + LF R +I R I + + ++IA+T
Sbjct: 44 RGFSAFSDRNLSYRERLRSGLVDIKADDAIDLF-RDMIHSRPLPTVIDFSRLFSAIAKTK 102
Query: 321 NVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC----VFRLMPERNIISYN 376
+ + G+ ++ S +I+ + +C L + +L E N I+++
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 162
Query: 377 SVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
++I+GL L G SEA + DR++E G PD T + L+ C +G E + +M E
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-E 221
Query: 437 FNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE---PVDKAILGALLSCCNSCGNSEL 493
+ + Y ++ ++ +G+ A L + + E +D ++ G+ +
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 494 AETVAQKLFQNNPADNAFKVMLSNIYAGD----GRWDD-VKNLRD 533
A + ++ N ++ NI G GRWDD K LRD
Sbjct: 282 AFNLFNEMEMKGITTN---IITYNILIGGFCNAGRWDDGAKLLRD 323
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 174/415 (41%), Gaps = 24/415 (5%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLG 97
+ L+ Y + I+ A + D+M + +N++I L + A++L M+
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 98 ADIKPDNYTFACVIRACADNFD----LGMLRLVHGGAVASGLGLDAICCSALVSAYSKLG 153
+PD T+ V+ D +L + G + G+ + + ++ K
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV----LIYNTIIDGLCKYK 270
Query: 154 LVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLA 209
+ +A +F + P++V ++SLIS W ++ S M PD +T +
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 210 GLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN- 268
L+ L + L+ K +D S L++ + +D A ++F + +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 269 ---PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPG 325
PD+VT++ LI G+ + E+ + FR++ +++ ++ + Q +
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 326 CEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP----ERNIISYNSVISG 381
EI ++ G+ ++ + L+D K G L + VF + E I +YN +I G
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
+ G + + +F + KG+ PD ++ ++ C G E +F+ MK++
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 208/517 (40%), Gaps = 62/517 (11%)
Query: 40 YATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTM 95
Y KL R + ++ A +F +M S+ ++ ++ A A +FD +SL M
Sbjct: 48 YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 107
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLV 155
I ++YT++ +I L + V G + G + + S+L++ Y +
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 156 HEA----NRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
EA +++F +P+ V +N+LI G M + M G +PD T +
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN--- 268
+ G+ + L + L+ + + ++ + K MD A +F +
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 269 -PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
P++VT+S+LIS G +I ERK
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERK------------------------- 321
Query: 328 IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI----ISYNSVISGLG 383
+ DV SALID + K G L ++ M +R+I ++Y+S+I+G
Sbjct: 322 ---------INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
+H EA +MF+ ++ K PD T++ L+ C V EG E+F+ M +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNT 431
Query: 444 EHYVYMVKLLGSAGELEEAYNLTQSLPE---PVDKAILGALLSCCNSCGNSELAETVAQK 500
Y +++ L AG+ + A + + + P + LL G E A V +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 501 LFQNN--PADNAFKVMLSNI-YAG---DGRWDDVKNL 531
L ++ P + +M+ + AG DG WD NL
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDG-WDLFCNL 527
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/512 (20%), Positives = 215/512 (41%), Gaps = 20/512 (3%)
Query: 34 LSQDPFYATKLVRLYAATNDINSAYHVFDKMST----RSVYLWNSMIRAFALSQRFDNAV 89
+S D + + + + + ++ A V KM + +S++ + S+R +AV
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 90 SLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAY 149
+L M+ KPD +TF +I + + V G D + +V+
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 150 SKLGLVHEA----NRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDG 205
K G + A ++ G E D+V++N++I G D + +F+ M G RPD
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 206 YTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCS 265
+T + L+ + + L + ++ + S L+ + + + A +++
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 266 IS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
+ +PD+ T+S+LI+G+ ++ F +I + + + +T++ +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP----ERNIISYNS 377
V G E+ + + GL + + LI + + VF+ M NI++YN
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 378 VISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEF 437
++ GL +G ++A +F+ + + PD T++ ++ C AG V +G E+F + +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK- 532
Query: 438 NIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE--PV-DKAILGALLSCCNSCGNSELA 494
+ Y M+ G EEA +L + + E P+ + L+ G+ E +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 495 ETVAQKLFQNNPADNAFKVMLSNIYAGDGRWD 526
+ +++ A +A + L DGR D
Sbjct: 593 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLD 624
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 152/378 (40%), Gaps = 47/378 (12%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S+ +N ++ A A +F+ +SL M I D YT++ I L + V
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCS 183
+ G D + S+L++ Y + +A + + + E PD + +LI G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 184 AAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVG 243
+ + M G +PD T ++ G+ + + L K +++D +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 244 SLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIM 299
+ ++ + K MD A +F + N PD+ T+S+LIS G +I
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI- 320
Query: 300 ERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHF 359
ERK + +V SALID + K G L
Sbjct: 321 ERK----------------------------------INPNVVTFSALIDAFVKEGKLVE 346
Query: 360 GICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLG 415
++ M +R +I +Y+S+I+G +H EA MF+ ++ K P+ T+S L+
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 416 ACCHAGLVNEGREIFQRM 433
C A V EG E+F+ M
Sbjct: 407 GFCKAKRVEEGMELFREM 424
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 135/277 (48%), Gaps = 14/277 (5%)
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
PD++ ++++++GY D ++ M+ G +P+ Y ++G + L +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQ 283
+ G+ D+ V + L+ + + + +A + F + + PD++T++A+ISG+ Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 284 CGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKV 343
G+ + F ++ + + DS+ ++ + +++ +H ++I+ G +V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 344 SSALIDMYSKCG-------FLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFD 396
+ LID K G LH ++++ + NI +YNS+++GL G EA ++
Sbjct: 459 YTTLIDGLCKEGDLDSANELLH---EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 397 RILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
GL D T++ L+ A C +G +++ +EI + M
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 156/350 (44%), Gaps = 15/350 (4%)
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDV 188
GL ++ +++ ++ + EA F+ + PD V++ +LI G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIAD-PSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
+ F M PD T ++ G ++ G+ H + K GL+ DS + L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELI 428
Query: 248 SMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ Y + M A+RV + +P++VT++ LI G + G+ + ++ +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
+ +++ + ++ N+ ++ G GL +D + L+D Y K G + +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 364 FRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
+ M + I+++N +++G LHG + ++ + +L KG+AP+A TF++L+ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 420 AGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
+ I++ M + + Y +VK A ++EA+ L Q +
Sbjct: 609 RNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 158/374 (42%), Gaps = 39/374 (10%)
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
++ ++I F A F M DI PD T+ +I D+ +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAW 186
GL D++ + L++ Y K G + +A RV N + + P++V + +LI G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
D ++ M +G +P+ +T ++ G+ + L G +GL++D+ + L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 247 VSMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ Y + MD A + + P +VT++ L++G+ G ++ + +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG-----------MLEDGE 581
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
KL + ++A +A A T N + Y IR+ L K ++A+ + +C
Sbjct: 582 KLLNWMLAKGIAPNATTFN----SLVKQYCIRNNL----KAATAI----------YKDMC 623
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
+ P+ +Y +++ G EA+ +F + KG + +T+S L+
Sbjct: 624 SRGVGPDGK--TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 423 VNEGREIFQRMKDE 436
E RE+F +M+ E
Sbjct: 682 FLEAREVFDQMRRE 695
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/397 (18%), Positives = 159/397 (40%), Gaps = 16/397 (4%)
Query: 54 INSAYHVFDKMS----TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
I A+H+ M T V +++++ + D L M +KP++Y +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI---- 165
+I L + G+ D + + L+ + K G + A++ F +
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
PD++ + ++ISG+ ++F M G PD T L+ G +
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGY 281
+H ++G + + L+ + +DSA + + P++ T++++++G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
+ G E+ + + D++ T++ + ++ + EI ++ GL+ +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDR 397
+ L++ + G L G + M + N ++NS++ + A ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+ +G+ PD T+ L+ C A + E +FQ MK
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 135/277 (48%), Gaps = 14/277 (5%)
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
PD++ ++++++GY D ++ M+ G +P+ Y ++G + L +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 228 HGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQ 283
+ G+ D+ V + L+ + + + +A + F + + PD++T++A+ISG+ Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 284 CGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKV 343
G+ + F ++ + + DS+ ++ + +++ +H ++I+ G +V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 344 SSALIDMYSKCG-------FLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFD 396
+ LID K G LH ++++ + NI +YNS+++GL G EA ++
Sbjct: 459 YTTLIDGLCKEGDLDSANELLH---EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 397 RILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRM 433
GL D T++ L+ A C +G +++ +EI + M
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 156/350 (44%), Gaps = 15/350 (4%)
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDV 188
GL ++ +++ ++ + EA F+ + PD V++ +LI G+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 189 GMQMFSSMRLVGTRPDGYTLAGLLGGIAD-PSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
+ F M PD T ++ G ++ G+ H + K GL+ DS + L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELI 428
Query: 248 SMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ Y + M A+RV + +P++VT++ LI G + G+ + ++ +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICV 363
+ +++ + ++ N+ ++ G GL +D + L+D Y K G + +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 364 FRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCH 419
+ M + I+++N +++G LHG + ++ + +L KG+AP+A TF++L+ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 420 AGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL 469
+ I++ M + + Y +VK A ++EA+ L Q +
Sbjct: 609 RNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 158/374 (42%), Gaps = 39/374 (10%)
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
++ ++I F A F M DI PD T+ +I D+ +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAW 186
GL D++ + L++ Y K G + +A RV N + + P++V + +LI G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
D ++ M +G +P+ +T ++ G+ + L G +GL++D+ + L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 247 VSMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ Y + MD A + + P +VT++ L++G+ G ++ + +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG-----------MLEDGE 581
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
KL + ++A +A A T N + Y IR+ L K ++A+ + +C
Sbjct: 582 KLLNWMLAKGIAPNATTFN----SLVKQYCIRNNL----KAATAI----------YKDMC 623
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
+ P+ +Y +++ G EA+ +F + KG + +T+S L+
Sbjct: 624 SRGVGPDGK--TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 423 VNEGREIFQRMKDE 436
E RE+F +M+ E
Sbjct: 682 FLEAREVFDQMRRE 695
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/397 (18%), Positives = 159/397 (40%), Gaps = 16/397 (4%)
Query: 54 INSAYHVFDKMS----TRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
I A+H+ M T V +++++ + D L M +KP++Y +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI---- 165
+I L + G+ D + + L+ + K G + A++ F +
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
PD++ + ++ISG+ ++F M G PD T L+ G +
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGY 281
+H ++G + + L+ + +DSA + + P++ T++++++G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
+ G E+ + + D++ T++ + ++ + EI ++ GL+ +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDR 397
+ L++ + G L G + M + N ++NS++ + A ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
+ +G+ PD T+ L+ C A + E +FQ MK
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 186/443 (41%), Gaps = 50/443 (11%)
Query: 86 DNAVSLFRTMLGADIKPD----NYTFACVIRACADNFDLGMLRLVHGGAVASGL-----G 136
D+AV LFR M+ + P N F+ + + L + + + +A +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 137 LDAIC-CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
++ C C L A+S +G + + EPD V++N+L++G +++
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLG------YEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 196 MRLVGTRPDGYTLAGLLGG------IADPSLLC-----IGQGLHGLSHKSGLDSDSHVGS 244
M +G +P TL L+ G ++D +L G + +++ L+ G
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
++M K + ++ D V +S +I G + G + F ++ ++ K
Sbjct: 244 TALAMELLRKMEERNIKL-------DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
D I T++ G ++ +I+ + +V S LID + K G L +
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 365 RLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
+ M +R N I+YNS+I G EA +M D ++ KG PD TF+ L+ C A
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL------PEPVD 474
+++G E+F+ M + A Y +V+ +G+LE A L Q + P+ V
Sbjct: 417 NRIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 475 KAILGALLSCCNSCGNSELAETV 497
IL L C N EL + +
Sbjct: 476 YKILLDGL-----CDNGELEKAL 493
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/463 (19%), Positives = 183/463 (39%), Gaps = 57/463 (12%)
Query: 54 INSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
++ A + D+M ++ N+++ L+ + +AV L M+ +P+ T+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA--- 166
V+ + + + + LDA+ S ++ K G + A +FN +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 167 -EPDLVLWNSLISGYGCSAAWDVGM----------------------------------- 190
+ D++ +N+LI G+ + WD G
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMY 250
Q+ M G P+ T L+ G + L + L G D D ++L++ Y
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 251 SRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDS 306
+ +D +F +S + VT++ L+ G+ Q G+ E F++++ R + D
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 307 ILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRL 366
+ +L + + EI G + + +E D+ + +I + +F
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 367 MPERNII----SYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
+P + + +YN +IS L S+A +F ++ E+G APD T++ L+ A
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 423 VNEGREIFQRMKDEFNIKARPEHY--VYMVKLLGSAGELEEAY 463
E+ + MK P V MV + S+GEL++++
Sbjct: 594 ATTAAELIEEMKSS----GFPADVSTVKMVINMLSSGELDKSF 632
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 71 LWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGA 130
++N+++ L R A+ L M+ KP T ++ N + ++
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 131 VASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEP----DLVLWNSLISGYGCSAAW 186
V +G + + +++ K G A + + E D V ++ +I G +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 187 DVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
D +F+ M + G + D T L+GG + G+ G LL
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNA-----GRWDDG-------------AKLL 321
Query: 247 VSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDS 306
M R IS P++VT+S LI + + G+ + ++++ ++
Sbjct: 322 RDMIKR------------KIS-PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 307 ILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRL 366
I +++ + + ++ +I G + D+ + LI+ Y K + G+ +FR
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 367 MPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
M R N ++YN+++ G G A ++F ++ + + PD ++ LL C G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSLP 470
+ + EIF +++ K + +YM+ + G +A ++++A++L SLP
Sbjct: 489 LEKALEIFGKIEKS---KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 172/418 (41%), Gaps = 49/418 (11%)
Query: 34 LSQDPFYATKLVRLYAATNDINSAYHVFDKMST----RSVYLWNSMIRAFALSQRFDNAV 89
+S D + T L+ + + ++ A V KM S+ + S++ F L R +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 90 SLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAY 149
SL M+ + +P+ + +I N +L + + GLG D + + L++
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 150 SKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDG 205
G +A R+ + + PD+V + +LI + D +++ M P+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 206 YTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF-- 263
T ++ G+ L + L G + + L+S + + + +D ++F
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 264 --CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTAN 321
C N D+ T++ LI GY Q G+ L F ++ R
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR-------------------- 381
Query: 322 VRPGCEIHGYVIRHGLESDVKVSSALI---DMYSKCGFLHFGICVFRLMPERNIISYNSV 378
V P H ++ HGL + ++ SAL+ DM ++ I++YN +
Sbjct: 382 VTPDIITHC-ILLHGLCVNGEIESALVKFDDMRESEKYI-------------GIVAYNIM 427
Query: 379 ISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE 436
I GL +A+ +F R+ +G+ PDA T++ ++ C G E E+ +RMK+E
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 13/282 (4%)
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
P +V + L++ ++ + M L G D Y+ L+ S L +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 228 HGLSHKSGLD-SDSHVGSLLVSMYSRCKCMDSAYRVFCSISN---PDLVTWSALISGYSQ 283
G K G + S GSLL + D+ V + + P++V ++ LI G +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 284 CGEHEKVLLFFRKLIMERKKL--DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
GE L + ME+K L D + T+L + + + +++ + DV
Sbjct: 189 NGELNIALELLNE--MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNI----ISYNSVISGLGLHGCASEAFRMFDR 397
+ALID++ K G L +++ M + ++ ++YNS+I+GL +HG +A + FD
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 398 ILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDE-FN 438
+ KG P+ T++ L+ C +V+EG ++FQRM E FN
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 187/445 (42%), Gaps = 65/445 (14%)
Query: 41 ATKLVRLYAATNDINSAYHVFDKMSTRSV-----YLWNSMIRAFALSQRFDNAVSLFRTM 95
A L+ L + NSA VF + V +L ++++ + +A+ FR
Sbjct: 137 AQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRL- 195
Query: 96 LGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAV--------ASGLGLDAICCSALVS 147
+ F IR C + D M++L G + +G L+ + L++
Sbjct: 196 ------SRKHRFDVPIRGCGNLLD-RMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMN 248
Query: 148 AYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRP 203
+ K G + +A +VF+ I +P +V +N+LI+GY D G ++ M TRP
Sbjct: 249 KFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRP 308
Query: 204 DGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVF 263
D +T + L+ + + + GL K GL
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGL--------------------------- 341
Query: 264 CSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVR 323
P+ V ++ LI G+S+ GE + + ++K++ + + D +L T++ + ++
Sbjct: 342 ----IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 324 PGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI----ISYNSVI 379
I +IR GL D + LID + + G + + + + M + I + +++++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 380 SGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNI 439
G+ G +A R +L G+ PD T++ ++ A C G G ++ + M+ + ++
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 440 KARPEHYVYMVKLLG--SAGELEEA 462
P Y V L G G+++ A
Sbjct: 518 ---PSVVTYNVLLNGLCKLGQMKNA 539
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 175/405 (43%), Gaps = 46/405 (11%)
Query: 21 RAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYL----WNSMI 76
+A Q+ + K H +D + T ++R + A +F++M T + L +N+++
Sbjct: 253 KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLM 312
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
+ A + D A+ +F M+ +P+ YT++ ++ G L + G S
Sbjct: 313 QVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE---GQLVRLDGVVEISKRY 369
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSM 196
+ S LV SKLG V EA+R+F +W+ + G D M M S+
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCD-------MWSFPVKG-----ERDSYMSMLESL 417
Query: 197 RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCM 256
G + + + H+ G+ +D+ + + + S + K +
Sbjct: 418 CGAGKTIEAIEMLSKI-------------------HEKGVVTDTMMYNTVFSALGKLKQI 458
Query: 257 DSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATV 312
+ +F + +PD+ T++ LI+ + + GE ++ + F +L K D I ++
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSL 518
Query: 313 LASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP---- 368
+ + + +V + GL DV S L++ + K + +F M
Sbjct: 519 INCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGC 578
Query: 369 ERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSAL 413
+ NI++YN ++ L +G +EA ++ ++ ++GL PD+ T++ L
Sbjct: 579 QPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 177/436 (40%), Gaps = 70/436 (16%)
Query: 22 AKQLHACLL---KTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMS----TRSVYLWNS 74
+ L CL K L + F L++ Y + D + A+ V+ ++ ++ +N
Sbjct: 184 TEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNM 243
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASG 134
++ A A ++ A +F M + D YT+ +IR
Sbjct: 244 LLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMG------------------- 281
Query: 135 LGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVL----WNSLISGYGCSAAWDVGM 190
++G EA +FN + L L +N+L+ D +
Sbjct: 282 ----------------RIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 191 QMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQG----LHGLSHKSGLDSDSHVGSLL 246
Q+FS M G RP+ YT + LL L + +G L G+ S + S L
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLN-------LLVAEGQLVRLDGVVEISKRYMTQGIYSYL 378
Query: 247 VSMYSRCKCMDSAYRVFCSI-SNP---DLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
V S+ + A+R+FC + S P + ++ +++ G+ + + K+ +
Sbjct: 379 VRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
D+++ TV +++ + + ++ + + G D+ + LI + + G + I
Sbjct: 439 VTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 363 VFRLMPER-----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+F + ER +IISYNS+I+ LG +G EA F + EKGL PD T+S L+
Sbjct: 499 IFEEL-ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
Query: 418 CHAGLVNEGREIFQRM 433
V +F+ M
Sbjct: 558 GKTERVEMAYSLFEEM 573
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 155/362 (42%), Gaps = 13/362 (3%)
Query: 88 AVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVS 147
AV F M+ +PD ++ +I + + + SG+ D C+ALV
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 148 AY---SKLGLVHE--ANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTR 202
K+ L +E A + + + V++N+LISG+ + + + S M +G
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 203 PDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRV 262
PD T LL D ++L +G+ +SG+ D++ + L+ + R D Y
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Query: 263 FCSISNP----DLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQ 318
P D+V++S LI + + K F ++ + ++ + +++ + +
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 319 TANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNI----IS 374
N ++ + GL D + ++D K G + VF M E I IS
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 375 YNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK 434
YNS+ISGL G +EA ++F+ + K PD TF ++G ++ +++ +M
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
Query: 435 DE 436
D+
Sbjct: 493 DK 494
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 120/292 (41%), Gaps = 14/292 (4%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S ++N++I F + R + A +L M +PD T+ ++ DN L V
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA---EP----DLVLWNSLISGY 180
V SG+ LDA + L+ + + V ++ +N + EP D+V +++LI +
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCR---VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETF 335
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
++ ++F MR G + T L+ + + L + GL D
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 241 HVGSLLVSMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGYSQCGEHEKVLLFFRK 296
+ ++ + +D AY VF + PD +++++LISG + G + + F
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 297 LIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALI 348
+ + D + ++ + + + ++ ++ G D VS LI
Sbjct: 456 MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 190/450 (42%), Gaps = 22/450 (4%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTRSV----YLWNSMIRAFALSQRFDNAVSLFRTMLG 97
TKL+ + A + ++ D + V Y N ++ F S + A S M+
Sbjct: 76 TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135
Query: 98 ADIKPDNYTFACVIRA-CADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVH 156
+PD TF +I C N + +V+ V G+ D + + ++ + K G V+
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVN-QMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 157 EANRVFNGIA----EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
A +F+ + PD+V++ SL++G S W + M +PD T L+
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 213 GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN---- 268
+ L+ + + + + L++ + C+D A ++F +
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI 328
PD+V +++LI+G+ +C + + + F ++ + ++I T++ Q E+
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 329 HGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPER-------NIISYNSVISG 381
+++ G+ +++ + L+ G + + +F M +R NI +YN ++ G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 382 LGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKA 441
L +G +A +F+ + ++ + T++ ++ C AG V +F + + +K
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVKP 493
Query: 442 RPEHYVYMVKLLGSAGELEEAYNLTQSLPE 471
Y M+ L G EA+ L + + E
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 163/383 (42%), Gaps = 15/383 (3%)
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHG 128
+ + S+I F L R + A+S+ M+ IKPD + +I + N + +
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSA 184
G+ D + ++LV+ G +A+ + G+ + PD++ +N+LI +
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
+ ++++ M + P+ +T L+ G + + + L G D +
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDL----VTWSALISGYSQCGEHEKVLLFFRKLIME 300
L++ + +CK +D A ++F +S L +T++ LI G+ Q G+ F ++
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRH---GLESDVKVSSALIDMYSKCGFL 357
+ +L + V+ I + + G+ ++ + L+ G L
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 358 HFGICVFRLMPERNI----ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSAL 413
+ VF M +R + I+Y +I G+ G A +F + KG+ P+ T++ +
Sbjct: 442 EKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501
Query: 414 LGACCHAGLVNEGREIFQRMKDE 436
+ GL +E +F++MK++
Sbjct: 502 ISGLFREGLKHEAHVLFRKMKED 524
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 172/407 (42%), Gaps = 18/407 (4%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD--NFDLGMLRLVHGG 129
+ ++R S +F+ A+ LF M+ + P F ++ A FD+ + H
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 130 AVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAA 185
+ G+ D C+ L++ + + + A+ + EPD+V + SLI+G+
Sbjct: 100 IM--GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 186 WDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSL 245
+ M M + M +G +PD ++ + + L G+ D + +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 246 LVS---MYSRCKCMDSAYRVFCSIS-NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMER 301
LV+ R + DS R PD++T++ALI + + G+ + ++I
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 302 KKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
+ +++ V ++ + G DV ++LI+ + KC + +
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 362 CVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+F M ++ N I+Y ++I G G G + A +F ++ +G+ P+ T++ LL
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 418 CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLG--SAGELEEA 462
C+ G V + IF+ M+ P + Y V L G G+LE+A
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 144/344 (41%), Gaps = 16/344 (4%)
Query: 156 HEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGL 211
+EA +F + E P ++ + L++ +DV + + ++++G D YT L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 212 LGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSIS---- 267
+ S + G K G + D + L++ + M+ A + +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 268 NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCE 327
PD+V ++ +I + G L F ++ + D ++ +++ + + R
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 328 IHGYVIRHGLESDVKVSSALIDMYSKCG-FL---HFGICVFRLMPERNIISYNSVISGLG 383
+ + + ++ DV +ALID + K G FL + R+ NI +Y S+I+G
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 384 LHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARP 443
+ GC EA +MF + KG PD +++L+ C V++ +IF M + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNT 352
Query: 444 EHYVYMVKLLGSAGE---LEEAYNLTQSLPEPVDKAILGALLSC 484
Y +++ G G+ +E ++ S P + LL C
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/432 (19%), Positives = 185/432 (42%), Gaps = 22/432 (5%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM----STRSVYLWNSMIRAF 79
+L + L + D + + +Y + D+ +A V+ +M + +V + +I+
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 80 ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
R A ++ +L ++P T++ +I +L ++ + G D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 140 ICCSALVSAYSKLGLVHEANR----VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
+ LV SK GL+ A R + ++V++NSLI G+ +D +++F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLC------IGQGLHGLSHKSGLDSDSHVGSLLVSM 249
M + G +PD T ++ C IG L L ++ + +D V ++++ +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 250 YSRCKCMDSAYRVFCSI----SNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLD 305
+C ++ A + F ++ PD+VT++ +I GY ++ F L + +
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 306 SILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFR 365
++ + ++ + + ++ + + G + + L+D +SK + +F
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 366 LMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAG 421
M E+ +I+SY+ +I GL G EA +F + ++ L PD ++ L+ C G
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 422 LVNEGREIFQRM 433
+ E +++ M
Sbjct: 762 RLVEAALLYEHM 773
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 181/439 (41%), Gaps = 58/439 (13%)
Query: 115 ADNFDLGMLRLVHGGAVASGLG-----LDAICCSALVSAY-----------SKLGLVHEA 158
AD+FD +L GG SG+ LDA+ C V+ ++G+V
Sbjct: 201 ADHFD----KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV-SC 255
Query: 159 NRVFNGIA-------------------EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
N+V G++ P++V + +LI+G+ D +F M
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
G PD + L+ G +L +G L + G+ D V S + +Y + + +A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 260 ----YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
R+ C +P++VT++ LI G Q G + + +++ + + ++++
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGF----LHFGICVFRLMPERN 371
+ N+R G ++ +I+ G DV + L+D SK G + F + + N
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL------GACCHAGLVNE 425
++ +NS+I G EA ++F + G+ PD ATF+ ++ A C
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 426 GREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPE-PVDKAILGALLSC 484
G ++F M+ I A ++ LL +E+A +L E ++ I+
Sbjct: 556 GLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 485 CNSCGNSELAETVAQKLFQ 503
C C L E A+++F+
Sbjct: 615 CGYCSLRRLDE--AERIFE 631
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 26/316 (8%)
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFN-----GIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
LDA C L+ + G+V +A +F G+ P ++ L S G S D+
Sbjct: 144 LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG-SDRVDLIAD 202
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS-HKSGLDSDSHVGSLLVSMY 250
F + G P G + G + D +L C G+ L H+ ++ VG + +
Sbjct: 203 HFDKLCRGGIEPSGVSAHGF---VLD-ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258
Query: 251 SRCKCMDS---AYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ +D A R+ + + P++VT+ LI+G+ + GE ++ F+ +ME++
Sbjct: 259 LKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK--VMEQRG 316
Query: 304 LDSILVA--TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
++ L+A T++ + + G ++ + G++ DV V S+ ID+Y K G L
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 362 CVFRLM----PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
V++ M N+++Y +I GL G EAF M+ +IL++G+ P T+S+L+
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 418 CHAGLVNEGREIFQRM 433
C G + G +++ M
Sbjct: 437 CKCGNLRSGFALYEDM 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 182/433 (42%), Gaps = 25/433 (5%)
Query: 60 VFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFD 119
V D +V + ++I F D A LF+ M I+PD ++ +I
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 120 LGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF-----NGIAEPDLVLWN 174
LGM + A+ G+ LD + S+ + Y K G + A+ V+ GI+ P++V +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS-PNVVTYT 395
Query: 175 SLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS 234
LI G M+ + G P T + L+ G L G L+ K
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 235 GLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP----DLVTWSALISGYSQCGEHEKV 290
G D + +LV S+ M A R + ++V +++LI G+ + ++
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 291 LLFFRKLIMERKKLDSILVATVL-ASIAQTA---NVRP--GCEIHGYVIRHGLESDVKVS 344
L FR + + K D TV+ SI + A +++P G ++ + R+ + +D+ V
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 345 SALIDMYSKCGFLHFGICVFRLMP----ERNIISYNSVISGLGLHGCASEAFRMFDRILE 400
+ +I + KC + F + E +I++YN++I G EA R+F+ +
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 401 KGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVY--MVKLLGSAGE 458
P+ T + L+ C ++ +F M ++ ++P Y ++ + +
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK---GSKPNAVTYGCLMDWFSKSVD 692
Query: 459 LEEAYNLTQSLPE 471
+E ++ L + + E
Sbjct: 693 IEGSFKLFEEMQE 705
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%)
Query: 328 IHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGC 387
+H ++ SD+ +++I+MYS CG + + VF MPERN+ ++ VI +G
Sbjct: 203 VHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ 262
Query: 388 ASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYV 447
+A F R ++G PD F + AC G +NEG F+ M E+ I EHYV
Sbjct: 263 GEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV 322
Query: 448 YMVKLLGSAGELEEAYNLTQSLPEPVD 474
+VK+L G L+EA +S+ VD
Sbjct: 323 SLVKMLAEPGYLDEALRFVESMEPNVD 349
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 2 LTQIQWLHSELSNVCKSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVF 61
L ++ W+ ++L ++L AK +H + + D ++ +Y+ + A VF
Sbjct: 181 LPRLFWI-AQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVF 239
Query: 62 DKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLG 121
+ M R++ W +IR FA + + ++A+ F KPD F + AC D+
Sbjct: 240 NSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMN 299
Query: 122 MLRLVHGGAVASGLGLDAICC----SALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLI 177
L+H ++ G+ I C +LV ++ G + EA R + EP++ LW +L+
Sbjct: 300 E-GLLHFESMYKEYGI--IPCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLM 355
Query: 178 S 178
+
Sbjct: 356 N 356
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/480 (19%), Positives = 197/480 (41%), Gaps = 26/480 (5%)
Query: 44 LVRLYAATNDINSAYHVFDKMSTRSV----YLWNSMIRAFALSQRFDNAVSLFRTMLGAD 99
+V+ Y D++ A F++M R + ++ S+I A+A+ + D A+S R M
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 100 IKPDNYTFACVI-------RACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKL 152
I+ T++ ++ A A ++ + +H AS G +
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 153 GLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLL 212
LV E GI P + ++++++ GY A G+ +F ++ G P T L+
Sbjct: 435 ALVREMEE--EGIDAP-IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 213 GGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISN---- 268
+ + + + G+ + S++++ + + K +A+ VF +
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 269 PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEI 328
PD++ ++ +IS + G ++ + +++ R + + ++ A++ ++R E+
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 329 HGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMP----ERNIISYNSVISGLGL 384
+ R G V + LI+ + + + + M N +Y ++ G
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 385 HGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPE 444
G +AF F R+ +GL D T+ ALL ACC +G + + + M NI
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR-NIPRNSF 730
Query: 445 HYVYMVKLLGSAGELEEAYNLTQSLPE---PVDKAILGALLSCCNSCGNSELAETVAQKL 501
Y ++ G++ EA +L Q + + D + +S C+ G+ A +++
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 168/426 (39%), Gaps = 43/426 (10%)
Query: 69 VYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHG 128
+ ++++M+ + + + +F+ + P T+ C+I + V
Sbjct: 449 IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSR 508
Query: 129 GAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSA 184
G+ + S +++ + KL A VF + + PD++L+N++IS +
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 185 AWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGS 244
D +Q M+ + RP T ++ G A KSG D
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA----------------KSG---DMRRSL 609
Query: 245 LLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKL 304
+ M RC C+ P + T++ LI+G + + EK + ++ +
Sbjct: 610 EVFDMMRRCGCV------------PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 305 DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVF 364
+ ++ A + E + GL+ D+ AL+ K G + + V
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 365 RLMPERNI----ISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHA 420
+ M RNI YN +I G G EA + ++ ++G+ PD T+++ + AC A
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 421 GLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEA---YNLTQSLPEPVDKAI 477
G +N + + M + +K + Y ++K A E+A Y +++ DKA+
Sbjct: 778 GDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 478 LGALLS 483
LL+
Sbjct: 837 YHCLLT 842
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 42 TKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNSMIRAFALSQRFDNAVSLFRTMLG 97
TK+++ YA+ D A+ F ++ ++ + ++++A S R +A+++ + M
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 98 ADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHE 157
+I +++ + +I A D+ + G+ D ++ +SA SK G ++
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 158 ANRVFNGI----AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPD 204
A + + +P++ + +LI G+ ++ + + + M+ +G +PD
Sbjct: 783 ATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 158/377 (41%), Gaps = 51/377 (13%)
Query: 115 ADNFDLGMLRLVHGGAVASGLG-----LDAICCSALVSAY-----------SKLGLVHEA 158
AD+FD +L GG SG+ LDA+ C V+ ++G+V
Sbjct: 201 ADHFD----KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV-SC 255
Query: 159 NRVFNGIA-------------------EPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLV 199
N+V G++ P++V + +LI+G+ D +F M
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 200 GTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSA 259
G PD + L+ G +L +G L + G+ D V S + +Y + + +A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 260 ----YRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLAS 315
R+ C +P++VT++ LI G Q G + + +++ + + ++++
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 316 IAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGF----LHFGICVFRLMPERN 371
+ N+R G ++ +I+ G DV + L+D SK G + F + + N
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 372 IISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQ 431
++ +NS+I G EA ++F + G+ PD ATF+ ++ G + E +F
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 432 RMKDEFNIKARPEHYVY 448
RM F + P+ Y
Sbjct: 556 RM---FKMGLEPDALAY 569
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 161/389 (41%), Gaps = 16/389 (4%)
Query: 60 VFDKMSTRSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFD 119
V D +V + ++I F D A LF+ M I+PD ++ +I
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 120 LGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVF-----NGIAEPDLVLWN 174
LGM + A+ G+ LD + S+ + Y K G + A+ V+ GI+ P++V +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS-PNVVTYT 395
Query: 175 SLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKS 234
LI G M+ + G P T + L+ G L G L+ K
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 235 GLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP----DLVTWSALISGYSQCGEHEKV 290
G D + +LV S+ M A R + ++V +++LI G+ + ++
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 291 LLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDM 350
L FR + + K D TV+ + + + + GLE D LID
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 351 YSKCGFLHFGICVFRLMPERNIISYNSVISGLGLH---GC--ASEAFRMFDRILEKGLAP 405
+ K G+ +F LM +RN IS + + + +H C +A + F+ ++E + P
Sbjct: 576 FCKHMKPTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 406 DAATFSALLGACCHAGLVNEGREIFQRMK 434
D T++ ++ C ++E IF+ +K
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLK 663
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 26/316 (8%)
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFN-----GIAEPDLVLWNSLISGYGCSAAWDVGMQ 191
LDA C L+ + G+V +A +F G+ P ++ L S G S D+
Sbjct: 144 LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG-SDRVDLIAD 202
Query: 192 MFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLS-HKSGLDSDSHVGSLLVSMY 250
F + G P G + G + D +L C G+ L H+ ++ VG + +
Sbjct: 203 HFDKLCRGGIEPSGVSAHGF---VLD-ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258
Query: 251 SRCKCMDS---AYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
+ +D A R+ + + P++VT+ LI+G+ + GE ++ F+ +ME++
Sbjct: 259 LKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK--VMEQRG 316
Query: 304 LDSILVA--TVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
++ L+A T++ + + G ++ + G++ DV V S+ ID+Y K G L
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 362 CVFRLM----PERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
V++ M N+++Y +I GL G EAF M+ +IL++G+ P T+S+L+
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 418 CHAGLVNEGREIFQRM 433
C G + G +++ M
Sbjct: 437 CKCGNLRSGFALYEDM 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/439 (18%), Positives = 182/439 (41%), Gaps = 32/439 (7%)
Query: 19 LLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLWNS 74
L A ++ +L +S + T L++ I A+ ++ ++ R S+ ++S
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 75 MIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADN--------FDLGMLRLV 126
+I F + +L+ M+ PD + ++ + F + ML
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML--- 488
Query: 127 HGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFN--GI--AEPDLVLWNSLISGYGC 182
+ L+ + ++L+ + +L EA +VF GI +PD+ + +++
Sbjct: 489 -----GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 183 SAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHV 242
+ + +F M +G PD L+ IG L L ++ + +D V
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 243 GSLLVSMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGYSQCGEHEKVLLFFRKLI 298
++++ + +C ++ A + F ++ PD+VT++ +I GY ++ F L
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 299 MERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLH 358
+ +++ + ++ + + ++ + + G + + L+D +SK +
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 359 FGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALL 414
+F M E+ +I+SY+ +I GL G EA +F + ++ L PD ++ L+
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 415 GACCHAGLVNEGREIFQRM 433
C G + E +++ M
Sbjct: 784 RGYCKVGRLVEAALLYEHM 802
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 186/466 (39%), Gaps = 25/466 (5%)
Query: 24 QLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKM----STRSVYLWNSMIRAF 79
+L + L + D + + +Y + D+ +A V+ +M + +V + +I+
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 80 ALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLGLDA 139
R A ++ +L ++P T++ +I +L ++ + G D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 140 ICCSALVSAYSKLGLVHEANR----VFNGIAEPDLVLWNSLISGYGCSAAWDVGMQMFSS 195
+ LV SK GL+ A R + ++V++NSLI G+ +D +++F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 196 MRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLVSMYSRCKC 255
M + G +PD T ++ L L K GL+ D+ L+ + CK
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF--CKH 579
Query: 256 MDSAY--RVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKKLDSILV 309
M ++F + + D+ + +I +C E FF LI + + D +
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 310 ATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGICVFRLMPE 369
T++ + I + + + LI + K + I +F +M E
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 370 R----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGLVNE 425
+ N ++Y ++ +F++F+ + EKG++P ++S ++ C G V+E
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Query: 426 GREIFQRMKDEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSL 469
IF + D K P+ Y + + G G L EA L + +
Sbjct: 760 ATNIFHQAIDA---KLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 163/380 (42%), Gaps = 45/380 (11%)
Query: 68 SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVH 127
S+ + S++ F R +A+ +F M+G KP+ + +I
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII---------------- 193
Query: 128 GGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGYGCSAAWD 187
D +C S V + L L++ + +GI PD+V +NSLISG S W
Sbjct: 194 ----------DGLCKSKQVD--NALDLLNRMEK--DGIG-PDVVTYNSLISGLCSSGRWS 238
Query: 188 VGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLLV 247
+M S M PD +T L+ + + + + LD D SLL+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 248 ---SMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIME 300
MYSR +D A +F + + PD+VT+S LI+GY + + E + F ++
Sbjct: 299 YGLCMYSR---LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 301 RKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFG 360
+++ ++ + + EI ++ G+ ++ + L+ G +
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 361 ICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
+ + M + +I++YN +I G+ G ++A+ ++ + +GL PD T++ ++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 417 CCHAGLVNEGREIFQRMKDE 436
GL E +F++MK++
Sbjct: 476 LYKKGLRREADALFRKMKED 495
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 148/377 (39%), Gaps = 53/377 (14%)
Query: 72 WNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACAD--NFD--------LG 121
+ M+R + D+++ LF M+ P F+ ++ A + +D +
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 122 MLRLVHGGAVASGLGLDAIC-CSALVSAYSKLGLVHEANRVFNGIAEPDLVLWNSLISGY 180
ML + H + L L+ C CS L A S LG + + EP +V + SL++G+
Sbjct: 109 MLGIPHNLCTCNIL-LNCFCRCSQLSLALSFLGKMIKLGH------EPSIVTFGSLLNGF 161
Query: 181 GCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDS 240
+ MF M +G +P+ ++ G+ + L K G+ D
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 241 -HVGSLLVSMYSRCKCMDSAYRVFCSISN---PDLVTWSALISGYSQCGEHEKVLLFFRK 296
SL+ + S + D+ V C PD+ T++ALI + G + F+ +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 297 LIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGF 356
+I D + + ++ + + + E+ G+++ G DV S LI+ Y K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 357 LHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
+ G+ +F M +R G+ + T++ L+
Sbjct: 342 VEHGMKLFCEMSQR-------------------------------GVVRNTVTYTILIQG 370
Query: 417 CCHAGLVNEGREIFQRM 433
C AG +N EIF+RM
Sbjct: 371 YCRAGKLNVAEEIFRRM 387
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 128/310 (41%), Gaps = 9/310 (2%)
Query: 168 PDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGL 227
P + ++ L+S +DV + ++ M+++G + T LL S L +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 228 HGLSHKSGLD-SDSHVGSLLVSMYSRCKCMDSAYRVFCSIS---NPDLVTWSALISGYSQ 283
G K G + S GSLL + D+ Y + P++V ++ +I G +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 284 CGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKV 343
+ + L ++ + D + ++++ + + + + + + DV
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 344 SSALIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRIL 399
+ALID K G + + M R +I++Y+ +I GL ++ EA MF ++
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 400 EKGLAPDAATFSALLGACCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGEL 459
KG PD T+S L+ C + V G ++F M + Y +++ AG+L
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR-GVVRNTVTYTILIQGYCRAGKL 377
Query: 460 EEAYNLTQSL 469
A + + +
Sbjct: 378 NVAEEIFRRM 387
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 189/441 (42%), Gaps = 24/441 (5%)
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N++I++F + + ++R M I+P YT+ ++ + V +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVFNGIA----EPDLVLWNSLISGYGCSAAWDV 188
+ D + + ++ Y K G +A + E D + + ++I C A D
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA--CYADSDF 308
Query: 189 G--MQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
G + ++ M G + + + ++GG+ L G + + G + + ++L
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 247 VSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ Y++ ++ A R+ + + PD+VT+S +++G + G E+ L +F +
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
++S+ ++++ + + V + + G D +ALID ++K + I
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Query: 363 VFRLMPE-----RNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
+F+ M E + + +Y ++SG+ EA +++D +++KG+ P AA F AL
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Query: 418 CHAGLVNEGREIFQRMKDEFNI-KARPEHYVYMVKLLGSAGELEEAYNLTQSLPE---PV 473
C +G V +I + I A E M+ L AG ++EA L + E V
Sbjct: 549 CLSGKVARACKILDELAPMGVILDAACED---MINTLCKAGRIKEACKLADGITERGREV 605
Query: 474 DKAILGALLSCCNSCGNSELA 494
I +++ G ++LA
Sbjct: 606 PGRIRTVMINALRKVGKADLA 626
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 164/404 (40%), Gaps = 54/404 (13%)
Query: 54 INSAYHVFDKMST----RSVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFAC 109
++SA VF+ M + + +N+MI+ + + + A+ R M + D T+
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 110 VIRACADNFDLGMLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGI---- 165
+I+AC + D G ++ G+ + S ++ K G ++E VF +
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 166 AEPDLVLWNSLISGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQ 225
++P++ ++ LI GY S + + +++ M G +PD T + ++ G+ +
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 226 GLHGLSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNP----DLVTWSALISGY 281
GL +S S L+ + +D A R+F +S D ++ALI +
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 282 SQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDV 341
++ + ++ + F+++ E ++ T+L S G H E +
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS--------------GMFKEHRNEEAL 523
Query: 342 KVSSALIDMYSKCGFLHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEK 401
K+ +ID G C + ++ +GL L G + A ++ D +
Sbjct: 524 KLWDMMIDK----GITPTAAC------------FRALSTGLCLSGKVARACKILDELAPM 567
Query: 402 GLAPDAATFSALLGACCHAGLVNE-----------GREIFQRMK 434
G+ DAA ++ C AG + E GRE+ R++
Sbjct: 568 GVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVPGRIR 610
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 223/538 (41%), Gaps = 54/538 (10%)
Query: 17 KSLLRAKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTR----SVYLW 72
K + A+QL +L L L+ Y + ++ V ++M S+ +
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 73 NSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVA 132
N++++ + ++A ++ + M PD +TF+ + + N V+ AV
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 133 SGLGLDAICCSALVSAYSKLGLVHEANRVF-----NGIAEPDLVLWNSLISGYGCSAAWD 187
SG+ ++A CS L++A K G + +A + G+ P+ V++N++I GY C
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGY-CRKGDL 405
Query: 188 VGMQM-FSSMRLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGLSHKSGLDSDSHVGSLL 246
VG +M +M G +PD L+ + + + G+ ++L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 247 VSMYSRCKCMDSAYRVFCSISN----PDLVTWSALISGYSQCGEHEKVLLFFRKLIMERK 302
+ Y R D + + + + P++V++ LI+ C
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN--CLC------------------ 505
Query: 303 KLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGIC 362
K +L A ++ + V P I+ +I G S K+ A +SK L GI
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI-DGCCSKGKIEDAF--RFSK-EMLKKGI- 560
Query: 363 VFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGACCHAGL 422
E N+++YN++I GL + G SEA + I KGL PD T+++L+ AG
Sbjct: 561 ------ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 423 VNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGALL 482
V +++ MK IK + Y ++ L G +E L + D + +L
Sbjct: 615 VQRCIALYEEMKRS-GIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVL 672
Query: 483 SCCNSCGNSELAETVAQKLFQNNPADNAFKVMLSNIYAGD---GRWDDVKNLRDKMTG 537
C G+ E A + +++ + + + K +++ G G+ +V++L D+M
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLD--KTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 198/476 (41%), Gaps = 36/476 (7%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSVYLWNS-----MI 76
A+ + +LK D T L+ + ++ A VFD MS NS +I
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 77 RAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLGMLRLVHGGAVASGLG 136
R + A L M +P T+ +I+A D + + + G
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 137 LDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLISGYGCSAAWDVGMQM 192
+ + L+ + G + EAN V + + P ++ +N+LI+GY ++
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 193 FSSMRLVGTRPDGYTLAGLLGG---IADPSLLCIGQGLHGLSH--KSGLDSDSHVGSLLV 247
+ M +P+ T L+ G + P + +H L +GL D ++L+
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPY-----KAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 248 SMYSRCKCMDSAYRVFCSIS----NPDLVTWSALISGYSQCGEHEKVLLFFRKLIMERKK 303
R M++AY++ S++ PD +T++A+I+ + + G+ + F ++ +
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 304 LDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSK-CGF-----L 357
LD + T++ + + R I +++ + + + ++DM SK C +
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 358 HFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
I L+P ++++Y +++ GL G + +FR+ + + G P+ ++ ++
Sbjct: 569 LGKINKLGLVP--SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 418 CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLG--SAGELEEAYNLTQSLPE 471
C G V E ++ M+D P H Y V + G + G+L+ A +++ E
Sbjct: 627 CQFGRVEEAEKLLSAMQDS---GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 135/319 (42%), Gaps = 14/319 (4%)
Query: 117 NFDLGMLRLV-HGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAEPDLVL--- 172
DLG L V + A G + I +V+A K G A + I + VL
Sbjct: 172 KLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSH 231
Query: 173 -WNSLISGYGCSAAWDVGMQMFSSM-RLVGTRPDGYTLAGLLGGIADPSLLCIGQGLHGL 230
SL+ G+ +++F M + V P+ + + L+ G+ + L GL
Sbjct: 232 IGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQ 291
Query: 231 SHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI----SNPDLVTWSALISGYSQCGE 286
+ G + ++L+ +D A+ +F + P++ T++ LI G + G+
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 287 HEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSA 346
E+ RK++ +R I ++ + V P E+ + + + +V+ +
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 347 LIDMYSKCGFLHFGICVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKG 402
L++ + G + + + + M + +I+SYN +I GL G + A+++ +
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 403 LAPDAATFSALLGACCHAG 421
+ PD TF+A++ A C G
Sbjct: 472 IEPDCLTFTAIINAFCKQG 490
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 194/477 (40%), Gaps = 82/477 (17%)
Query: 15 VCKSLLRAK------QLHACLLKTHLSQDPFYAT-KLVRLYAATNDINSAYHVFDKMSTR 67
+ + L+RAK +LH +L + + + + +V ++A +N I+ A+ F + +R
Sbjct: 45 IARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSR 104
Query: 68 ------SVYLWNSMIRAFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRACADNFDLG 121
SVYL+N ++ + +R + L++ M+ I P YTF +IRA D+ +
Sbjct: 105 FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVD 164
Query: 122 MLRLVHGGAVASGLGLDAICCSALVSAYSKLGLVHEANRVFNGIAE----PDLVLWNSLI 177
R + G + LV Y K GL + + N + P+ V++N+++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 178 SGYGCSAAWDVGMQMFSSMRLVGTRPDGYTLAGLLGGIADPSLLCI-GQGLHGLSHKSGL 236
S + D +M MR G PD T + S LC G+ L S +
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI------SALCKEGKVLDASRIFSDM 278
Query: 237 DSDSHVGSLLVSMYSRCKCMDSAYRVFCSISNPDLVTWSALISGYSQCGEHEKVLLFFRK 296
+ D ++G + P+ +T++ ++ G+ + G E F
Sbjct: 279 ELDEYLG----------------------LPRPNSITYNLMLKGFCKVGLLEDAKTLF-- 314
Query: 297 LIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGF 356
+SI LAS+ Q+ N+ + G ++RHG ++ + L M K
Sbjct: 315 --------ESIRENDDLASL-QSYNIW----LQG-LVRHG--KFIEAETVLKQMTDK--- 355
Query: 357 LHFGICVFRLMPERNIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGA 416
GI +I SYN ++ GL G S+A + + G+ PDA T+ LL
Sbjct: 356 ---GIG-------PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 417 CCHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKL--LGSAGELEEAYNLTQSLPE 471
C G V+ + + Q M P Y + L L G + EA L + + E
Sbjct: 406 YCSVGKVDAAKSLLQEM---MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 16/269 (5%)
Query: 225 QGLHGLSHKSGLDSDSHVGSLL--VSMYSRCKCMDSAYRVFCSI------SNPDLVTWSA 276
Q LH L S + + + SLL VS++++ +D A+ F + + P + ++
Sbjct: 59 QELHNLILSSSIQK-TKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNL 117
Query: 277 LISGYSQCGEHEKVLLFFRKLIMERKKLDSILVATVLASIAQTANVRPGCEIHGYVIRHG 336
L+ + E V ++ +++ + ++ ++ ++ V E+ + G
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 337 LESDVKVSSALIDMYSKCGFLHFGICVFRLMPE----RNIISYNSVISGLGLHGCASEAF 392
+ + L+ Y K G G+ + M N + YN+++S G ++
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 393 RMFDRILEKGLAPDAATFSALLGACCHAGLVNEGREIFQRMK-DEFNIKARPEHYVYMVK 451
+M +++ E+GL PD TF++ + A C G V + IF M+ DE+ RP Y +
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297
Query: 452 LLG--SAGELEEAYNLTQSLPEPVDKAIL 478
L G G LE+A L +S+ E D A L
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASL 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 109/572 (19%), Positives = 208/572 (36%), Gaps = 97/572 (16%)
Query: 22 AKQLHACLLKTHLSQDPFYATKLVRLYAATNDINSAYHVFDKMSTRSV----YLWNSMIR 77
A++L + + + F LVR Y + + + M + V ++N+++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 78 AFALSQRFDNAVSLFRTMLGADIKPDNYTFACVIRA-CADNFDLGMLRLVHGGAVASGLG 136
+F R D++ + M + PD TF I A C + L R+ + LG
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 137 L---DAICCSALVSAYSKLGLVHEANRVFNGIAEPD----LVLWNSLISGYGCSAAWDVG 189
L ++I + ++ + K+GL+ +A +F I E D L +N + G +
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 190 MQMFSSMRLVGTRPDGYTLAGLLGGIAD--------------------PSLLCIGQGLHG 229
+ M G P Y+ L+ G+ P + G LHG
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 230 LSHKSGLDSDSHVGSLLVSMYSRCKCMDSAYRVFCSI----------------------- 266
+D+ SLL M R C+ +AY C+I
Sbjct: 406 YCSVGKVDA---AKSLLQEMM-RNNCLPNAYT--CNILLHSLWKMGRISEAEELLRKMNE 459
Query: 267 --SNPDLVTWSALISGYSQCGEHEKVLLFFRKL----------------------IMERK 302
D VT + ++ G GE +K + + + ++E
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 303 KL-DSILVATVLASIAQTANVRPGCEIHGYVIRHGLESDVKVSSALIDMYSKCGFLHFGI 361
L D I +T+L + + + ++ L+ D + I + K G +
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 362 CVFRLMPER----NIISYNSVISGLGLHGCASEAFRMFDRILEKGLAPDAATFSALLGAC 417
V + M ++ ++ +YNS+I GLG+ E + D + EKG++P+ T++ +
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 418 CHAGLVNEGREIFQRMKDEFNIKARPEHYVYMVKLLGSAGELEEAYNLTQSL------PE 471
C V + + M + NI + Y+++ + + A + ++ E
Sbjct: 640 CEGEKVEDATNLLDEMMQK-NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE 698
Query: 472 PVDKAILGALLSCCNSCGNSELAETVAQKLFQ 503
+ + LL+ +EL E V + F+
Sbjct: 699 GLYSLMFNELLAAGQLLKATELLEAVLDRGFE 730