Miyakogusa Predicted Gene
- Lj1g3v0307940.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0307940.2 tr|G7J4A8|G7J4A8_MEDTR Thyroid
receptor-interacting protein OS=Medicago truncatula GN=MTR_3g076930
P,85.19,0,ATPases associated with a variety of cellula,AAA+ ATPase
domain; AAA,ATPase, AAA-type, core; P-loop ,CUFF.25509.2
(463 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24710.1 | Symbols: | P-loop containing nucleoside triphosph... 681 0.0
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3... 81 2e-15
AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase fami... 79 7e-15
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle tripl... 79 9e-15
AT5G20000.1 | Symbols: | AAA-type ATPase family protein | chr5:... 79 1e-14
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | ch... 78 2e-14
AT4G04180.1 | Symbols: | P-loop containing nucleoside triphosph... 77 2e-14
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 77 2e-14
AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B | chr2:1... 77 3e-14
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 77 4e-14
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 77 4e-14
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 76 6e-14
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 75 7e-14
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 72 7e-13
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 72 7e-13
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 72 7e-13
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 72 7e-13
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 72 7e-13
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 72 1e-12
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 72 1e-12
AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPas... 71 1e-12
AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |... 71 2e-12
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 68 1e-11
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 68 2e-11
AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein | ch... 67 2e-11
AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosph... 67 3e-11
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 66 6e-11
AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453 REV... 65 8e-11
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 65 8e-11
AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A... 65 1e-10
AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 65 1e-10
AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 65 1e-10
AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 65 1e-10
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 65 1e-10
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 64 2e-10
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 64 2e-10
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 64 2e-10
AT2G20140.1 | Symbols: | AAA-type ATPase family protein | chr2:... 64 2e-10
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 64 3e-10
AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosph... 63 4e-10
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4... 61 1e-09
AT4G23940.1 | Symbols: | FtsH extracellular protease family | c... 61 1e-09
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease... 61 2e-09
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960214-19... 61 2e-09
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 60 2e-09
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 60 3e-09
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 60 4e-09
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 60 4e-09
AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle trip... 59 9e-09
AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein ... 58 1e-08
AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit... 57 3e-08
AT3G02450.1 | Symbols: | cell division protein ftsH, putative |... 55 1e-07
AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-1... 54 2e-07
AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 | chr5:21563023... 54 2e-07
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1... 54 2e-07
AT1G45000.2 | Symbols: | AAA-type ATPase family protein | chr1:... 54 3e-07
AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305689-... 53 3e-07
AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 | chr5:4950411-49... 53 4e-07
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2... 53 5e-07
AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-274273... 53 5e-07
AT4G36580.1 | Symbols: | AAA-type ATPase family protein | chr4:... 52 1e-06
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 52 1e-06
AT5G64580.1 | Symbols: | AAA-type ATPase family protein | chr5:... 50 2e-06
AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C... 50 3e-06
AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease fam... 50 3e-06
AT3G03060.1 | Symbols: | P-loop containing nucleoside triphosph... 50 4e-06
AT2G18330.1 | Symbols: | AAA-type ATPase family protein | chr2:... 50 4e-06
>AT4G24710.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12745752-12748995
REVERSE LENGTH=475
Length = 475
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/430 (75%), Positives = 375/430 (87%)
Query: 34 SPLPSFMFSEDKVLVPVEVCLKPSSTAPIDHVRSAVEGMLEKRSLSYSGGPIPVPTDEPF 93
+P P E+K LV VEVCLKPSSTA ++ V+ AVE MLE RS+SY+ G + +P D+ F
Sbjct: 46 TPNPPPCLHENKFLVSVEVCLKPSSTARLEDVQRAVERMLENRSMSYADGLVLIPADDLF 105
Query: 94 LTDNVQRICVCDTDEGMHDDNVLLFWQVKPVVHVFQLSEEGPCEDVSSDGQSSSFNEWML 153
L DNVQRIC+CDT+E + +++VLLFWQVKPVVH FQL EEGPCED+ +DGQ +SFNEW+L
Sbjct: 106 LVDNVQRICICDTEEWVKNNDVLLFWQVKPVVHTFQLIEEGPCEDLCADGQPASFNEWIL 165
Query: 154 PAKEFDGMWESLIYESGLKQRLLRYAASALLFTKKGVDPFLVSWNRIVLLHGPPGTGKTS 213
PAKEFDG+WESLIYESGLKQRLLRYAASALLFT+KGV+P LVSWNRI+LLHGPPGTGKTS
Sbjct: 166 PAKEFDGLWESLIYESGLKQRLLRYAASALLFTQKGVNPNLVSWNRIILLHGPPGTGKTS 225
Query: 214 LCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLV 273
LCKALAQKLSIR N RYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEE+GNLV
Sbjct: 226 LCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEDGNLV 285
Query: 274 FVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDI 333
FVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ+DKLKSAPNVIILTTSNIT AID+
Sbjct: 286 FVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSAPNVIILTTSNITTAIDV 345
Query: 334 AFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDCKNVMLPNYANAKERLSA 393
AFVDRADIKAYVGPPTL RYEILRSCV+ELI GI++SFQ C + +P++++ KE+LS
Sbjct: 346 AFVDRADIKAYVGPPTLHVRYEILRSCVEELISKGIISSFQGCDGLSIPSFSSLKEKLSE 405
Query: 394 PDFHEPDASIQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCKMVET 453
+ H+ + CKQL+E A+ CEG+SGRSLRKLPFLAHAALA+P+ +P FLC M+ET
Sbjct: 406 SEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNFLCTMIET 465
Query: 454 AKRERSELPD 463
AKRE+SE P+
Sbjct: 466 AKREKSEQPE 475
>AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr3:19723416-19726489 FORWARD LENGTH=815
Length = 815
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 193 FLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESG 252
F +S ++ VL +GPPG GKT L KA+A + F I + L + WF ES
Sbjct: 510 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF---------ISIKGPELLTMWFGESE 560
Query: 253 KLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDK 312
V ++F K ++ + DE++S+A R ++ G + RV+N LLT++D
Sbjct: 561 ANVREIFDKARQSAP-----CVLFFDELDSIATQRGNSV-GDAGGAADRVLNQLLTEMDG 614
Query: 313 LKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQE 363
+ + V I+ +N ID A + R D Y+ P ++RY+I +SC+++
Sbjct: 615 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK 667
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 25/177 (14%)
Query: 184 LFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSL 243
LF GV P + +LL+GPPG+GKT + +A+A + F C +N +
Sbjct: 233 LFKSIGVKP-----PKGILLYGPPGSGKTLIARAVANETGAFF-----FC----INGPEI 278
Query: 244 FSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 303
SK ES + K F++ E+ + IDE++S+A R+ E R+V
Sbjct: 279 MSKLAGESESNLRKAFEEA-----EKNAPSIIFIDEIDSIAPKREKTHGEVER----RIV 329
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 358
+ LLT +D LKS +VI++ +N +ID A R D + +G P R E+LR
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 386
>AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family
protein | chr2:11781226-11783730 FORWARD LENGTH=435
Length = 435
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 18/161 (11%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R LL+GPPGTGK+ L KA+A + F V++ L SKW ES KLV+ L
Sbjct: 166 RAFLLYGPPGTGKSYLAKAVATEADSTF---------FSVSSSDLVSKWMGESEKLVSNL 216
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKL-KSAP 317
F EM E + + +DE++SL R G+E S R+ LL Q+ + +
Sbjct: 217 F----EMARESAPSI-IFVDEIDSLCGTRG---EGNESEASRRIKTELLVQMQGVGHNDE 268
Query: 318 NVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 358
V++L +N A+D A R D + Y+ P +AR + +
Sbjct: 269 KVLVLAATNTPYALDQAIRRRFDKRIYIPLPEAKARQHMFK 309
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A
ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Length = 419
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLL+GPPGTGKT L +A+A + C I V+ L K+ E ++V +LF
Sbjct: 198 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKYIGEGSRMVRELF- 247
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
++ E + +DE++S+ +AR + SG+ S+ R + LL QLD +++ +
Sbjct: 248 ----VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIK 303
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
+L +N +D A + R D K P ++R++IL+
Sbjct: 304 VLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILK 343
>AT5G20000.1 | Symbols: | AAA-type ATPase family protein |
chr5:6756915-6759550 FORWARD LENGTH=419
Length = 419
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLL+GPPGTGKT L +A+A + C I V+ L K+ E ++V +LF
Sbjct: 198 VLLYGPPGTGKTLLARAVAH---------HTDCTFIRVSGSELVQKYIGEGSRMVRELFV 248
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
+E + +DE++S+ +AR + SG+ S+ R + LL QLD +++ +
Sbjct: 249 MAREHAPS-----IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIK 303
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
+L +N +D A + R D K P ++R++IL+
Sbjct: 304 VLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILK 343
>AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 |
chr3:20993869-20998531 REVERSE LENGTH=1022
Length = 1022
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 162 WESLIYESGLKQRLLRYAASALLFTKKGVDPFLVSWNR---IVLLHGPPGTGKTSLCKAL 218
WE + ++ +K +L+ A+ + +K D F R +L+ GPPG KT + +A+
Sbjct: 723 WEDVGGQNEVKNQLME----AVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAV 778
Query: 219 AQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLID 278
A + + F + V LFSKW ES K V LF K + + D
Sbjct: 779 ASEAKLNF---------LAVKGPELFSKWVGESEKAVRSLFAKARANAPS-----IIFFD 824
Query: 279 EVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFV-- 336
E++SLA+ R G SD RV++ LL +LD L V ++ +N ID A +
Sbjct: 825 EIDSLASIRGKENDGVSVSD--RVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRP 882
Query: 337 DRADIKAYVGPPTLQARYEILR 358
R D YVGPP R IL+
Sbjct: 883 GRFDRLLYVGPPNETDREAILK 904
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VL+HGPPGTGKTSL + A+ + F VN + S++ ES K + ++F+
Sbjct: 421 VLIHGPPGTGKTSLARTFARHSGVNF---------FSVNGPEIISQYLGESEKALDEVFR 471
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
V ID+++++A ARK G E S R+V LL +D + V+
Sbjct: 472 SASNATP-----AVVFIDDLDAIAPARKEG--GEELSQ--RMVATLLNLMDGISRTDGVV 522
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 357
++ +N +I+ A R D + +G P+ R +IL
Sbjct: 523 VIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDIL 561
>AT4G04180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:2020471-2023673
FORWARD LENGTH=609
Length = 609
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 57/229 (24%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R VL GPPGTGKTS + +A + I L+ V ++ SK++ ES +L+ +
Sbjct: 362 RAVLFEGPPGTGKTSCARVIANQAGI---------PLLYVPLEAVMSKYYGESERLLGAV 412
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F + E+ +G ++F +DE+++ A +R + + + + RV++ LL Q+D +
Sbjct: 413 FSQANEL--PDGAIIF--LDEIDAFAISRDSEMHEA----TRRVLSVLLRQIDGFEQEKK 464
Query: 319 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDCKN 378
V+++ +N +D A + R D P LQ R EI+
Sbjct: 465 VVVIAATNRKQDLDPALISRFDSMIMFDLPDLQTRQEII--------------------- 503
Query: 379 VMLPNYANAKERLSAPDFHEPDASIQLCKQLLETAEACEGMSGRSLRKL 427
A ++LS P +L++ A+A E MSGR +R +
Sbjct: 504 ------AQYAKQLSKP-------------ELVQLAQATEAMSGRDIRDV 533
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GPPGTGKT L KALA + F I + +L SKWF ++ KL LF
Sbjct: 742 ILLFGPPGTGKTLLAKALATEAGANF---------ISITGSTLTSKWFGDAEKLTKALFS 792
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKS--APN 318
++ V + +DEV+SL AR A E + R+ N + D L+S +
Sbjct: 793 FASKLAP-----VIIFVDEVDSLLGARGGAF---EHEATRRMRNEFMAAWDGLRSKDSQR 844
Query: 319 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 358
++IL +N +D A + R + YV P + R +IL+
Sbjct: 845 ILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILK 884
>AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B |
chr2:1117595-1120361 FORWARD LENGTH=603
Length = 603
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F K G+ P R +LLHGPPG KT+L KA A F ++ LF
Sbjct: 312 FVKMGISPM-----RGILLHGPPGCSKTTLAKAAANAAQASF---------FSLSCAELF 357
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 304
S + E L+ FQ+ + + + DE + +A R S + + R+++
Sbjct: 358 SMYVGEGEALLRNTFQRARL-----ASPSIIFFDEADVVACKRGDESSSNSSTVGERLLS 412
Query: 305 ALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
LLT++D L+ A +++L +N AID A + R D+ YV PP L+AR+EIL+
Sbjct: 413 TLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQ 468
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 22/170 (12%)
Query: 195 VSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKL 254
+ W R +LL+GPPGTGKTSL +A+ Q+ LI ++ HS+ ES K+
Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECD---------AHLIVLSPHSVHRAHAGESEKV 103
Query: 255 VAKLF-QKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKL 313
+ + F + V ++ +++F IDE++ L R A +R+ + L T +D
Sbjct: 104 LREAFAEASSHAVSDKPSVIF--IDEIDVLCPRRDA-----RREQDVRIASQLFTLMDSN 156
Query: 314 K---SAPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 358
K SAP V+++ ++N AID A R D V P + R +IL+
Sbjct: 157 KPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQ 206
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GPPGTGKT L KALA + F I + +L SKWF ++ KL LF
Sbjct: 730 ILLFGPPGTGKTLLAKALATEAGANF---------ISITGSTLTSKWFGDAEKLTKALFS 780
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKS--APN 318
++ V + +DE++SL AR + SE + R+ N + D L+S +
Sbjct: 781 FATKLAP-----VIIFVDEIDSLLGARGGS---SEHEATRRMRNEFMAAWDGLRSKDSQR 832
Query: 319 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 358
++IL +N +D A + R + YV P + R +IL+
Sbjct: 833 ILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILK 872
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GPPGTGKT L KALA + F I + +L SKWF ++ KL LF
Sbjct: 752 ILLFGPPGTGKTLLAKALATEAGANF---------ISITGSTLTSKWFGDAEKLTKALFS 802
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKS--APN 318
++ V + +DE++SL AR + SE + R+ N + D L+S +
Sbjct: 803 FATKLAP-----VIIFVDEIDSLLGARGGS---SEHEATRRMRNEFMAAWDGLRSKDSQR 854
Query: 319 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 358
++IL +N +D A + R + YV P + R +IL+
Sbjct: 855 ILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILK 894
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 57/231 (24%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R +LL GPPGTGKT L KA+A + F I V+ ++ SKWF E K V L
Sbjct: 552 RGILLFGPPGTGKTMLAKAIANEAGASF---------INVSMSTITSKWFGEDEKNVRAL 602
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F ++ + + +DEV+S+ R E ++ N +T D L + P
Sbjct: 603 FTLAAKV-----SPTIIFVDEVDSMLGQRTRV---GEHEAMRKIKNEFMTHWDGLMTKPG 654
Query: 319 --VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDC 376
+++L +N +D A + R + + VG P++++R +ILR+ +
Sbjct: 655 ERILVLAATNRPFDLDEAIIRRFERRIMVGLPSIESREKILRTLL--------------- 699
Query: 377 KNVMLPNYANAKERLSAPDFHEPDASIQLCKQLLETAEACEGMSGRSLRKL 427
+KE+ DFH E + EG SG L+ L
Sbjct: 700 ----------SKEKTENLDFH-------------ELGQITEGYSGSDLKNL 727
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 193 FLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESG 252
F +S ++ VL +GPPG GKT L KA+A + F I V L + WF ES
Sbjct: 509 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF---------ISVKGPELLTMWFGESE 559
Query: 253 KLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDK 312
V ++F K ++ + DE++S+A R + +G + RV+N LLT++D
Sbjct: 560 ANVREIFDKARQSAP-----CVLFFDELDSIATQRGNS-AGDAGGAADRVLNQLLTEMDG 613
Query: 313 LKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQE 363
+ + V I+ +N ID A + R D Y+ P +R I ++C+++
Sbjct: 614 MNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRK 666
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 25/177 (14%)
Query: 184 LFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSL 243
LF GV P + +LL+GPPG+GKT + +A+A + F C +N +
Sbjct: 232 LFKSIGVKP-----PKGILLYGPPGSGKTLIARAVANETGAFF-----FC----INGPEI 277
Query: 244 FSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 303
SK ES + K F++ E+ + IDE++S+A R+ E R+V
Sbjct: 278 MSKLAGESESNLRKAFEEA-----EKNAPSIIFIDEIDSIAPKREKTNGEVER----RIV 328
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 358
+ LLT +D LKS +VI++ +N +ID A R D + +G P R E+LR
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R +LL GPPGTGKT L KA+A++ F I V+ ++ SKWF E K V L
Sbjct: 554 RGILLFGPPGTGKTMLAKAIAKEAGASF---------INVSMSTITSKWFGEDEKNVRAL 604
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F ++ + + +DEV+S+ R E ++ N ++ D L + P
Sbjct: 605 FTLASKV-----SPTIIFVDEVDSMLGQRTRV---GEHEAMRKIKNEFMSHWDGLMTKPG 656
Query: 319 --VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCV 361
+++L +N +D A + R + + VG P ++ R +ILR+ +
Sbjct: 657 ERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLL 701
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R +LL GPPGTGKT + KA+A + F I V+ ++ SKWF E K V L
Sbjct: 553 RGILLFGPPGTGKTMMAKAIANEAGASF---------INVSMSTITSKWFGEDEKNVRAL 603
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKS--A 316
F ++ + + +DEV+S+ R E ++ N +T D L S
Sbjct: 604 FTLAAKV-----SPTIIFVDEVDSMLGQRTRV---GEHEAMRKIKNEFMTHWDGLMSNAG 655
Query: 317 PNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCV 361
+++L +N +D A + R + + VG P++++R +ILR+ +
Sbjct: 656 DRILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESREKILRTLL 700
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 193 FLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESG 252
F +S ++ VL +GPPG GKT L KA+A + F I V L + WF ES
Sbjct: 509 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF---------ISVKGPELLTMWFGESE 559
Query: 253 KLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDK 312
V ++F K ++ + DE++S+A R G + RV+N LLT++D
Sbjct: 560 ANVREIFDKARQSAP-----CVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDG 614
Query: 313 LKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQE 363
+ + V I+ +N ID A + R D Y+ P +R I ++ +++
Sbjct: 615 MNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRK 667
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 25/177 (14%)
Query: 184 LFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSL 243
LF GV P + +LL+GPPG+GKT + +A+A + F C +N +
Sbjct: 232 LFKSIGVKP-----PKGILLYGPPGSGKTLIARAVANETGAFF-----FC----INGPEI 277
Query: 244 FSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 303
SK ES + K F++ E+ + IDE++S+A R+ E R+V
Sbjct: 278 MSKLAGESESNLRKAFEEA-----EKNAPSIIFIDEIDSIAPKREKTNGEVER----RIV 328
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQARYEILR 358
+ LLT +D LKS +VI++ +N +ID A R D + +G P R E+LR
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R +LL GPPGTGKT L KA+A++ F I V+ ++ SKWF E K V L
Sbjct: 551 RGILLFGPPGTGKTMLAKAIAKEAGASF---------INVSMSTITSKWFGEDEKNVRAL 601
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F ++ + + +DEV+S+ R E ++ N ++ D L + P
Sbjct: 602 FTLASKV-----SPTIIFVDEVDSMLGQRTRV---GEHEAMRKIKNEFMSHWDGLMTKPG 653
Query: 319 --VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCV 361
+++L +N +D A + R + + VG P ++ R +ILR+ +
Sbjct: 654 ERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLL 698
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R +LL GPPGTGKT L KA+A++ F I V+ ++ SKWF E K V L
Sbjct: 556 RGILLFGPPGTGKTMLAKAIAKEAGASF---------INVSMSTITSKWFGEDEKNVRAL 606
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F ++ + + +DEV+S+ R E ++ N ++ D L + P
Sbjct: 607 FTLASKV-----SPTIIFVDEVDSMLGQRTRV---GEHEAMRKIKNEFMSHWDGLMTKPG 658
Query: 319 --VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCV 361
+++L +N +D A + R + + VG P ++ R +ILR+ +
Sbjct: 659 ERILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLL 703
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 162 WESLIYESGLKQRLLRYAASALLFTKKGVDPF--LVSWNRIVLLHGPPGTGKTSLCKALA 219
W+ + +G KQ LL ++ K D F L R +LL GPPG GKT L KA+A
Sbjct: 219 WDDVAGLNGAKQALLEM----VILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVA 274
Query: 220 QKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDE 279
+ V+A SL SKW E+ KLV LF Q + + +++F +DE
Sbjct: 275 SE---------SQATFFNVSASSLTSKWVGEAEKLVKTLF---QVAISRQPSVIF--MDE 320
Query: 280 VESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN--VIILTTSNITAAIDIAFVD 337
++S+ + R S SE S R+ + L Q D + S P+ VII+ +N +D A +
Sbjct: 321 IDSIMSTR----STSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR 376
Query: 338 RADIKAYVGPPTLQARYEILRSCVQ 362
R + YV P R + ++ ++
Sbjct: 377 RLVKRIYVPLPDSNVRKLLFKTKLK 401
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 162 WESLIYESGLKQRLLRYAASALLFTKKGVDPF--LVSWNRIVLLHGPPGTGKTSLCKALA 219
W+ + +G KQ LL ++ K D F L R +LL GPPG GKT L KA+A
Sbjct: 215 WDDVAGLNGAKQALLEM----VILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVA 270
Query: 220 QKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDE 279
+ V+A SL SKW E+ KLV LFQ + + +++F +DE
Sbjct: 271 SE---------SQATFFNVSASSLTSKWVGEAEKLVKTLFQV---AISRQPSVIF--MDE 316
Query: 280 VESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN--VIILTTSNITAAIDIAFVD 337
++S+ + R S SE S R+ + L Q D + S P+ VII+ +N +D A +
Sbjct: 317 IDSIMSTR----STSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR 372
Query: 338 RADIKAYVGPPTLQARYEILRSCVQ 362
R + YV P R + ++ ++
Sbjct: 373 RLVKRIYVPLPDSNVRKLLFKTKLK 397
>AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPase 3
| chr5:23569155-23571116 FORWARD LENGTH=408
Length = 408
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 184 LFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSL 243
L+ + G+DP R VLL+GPPGTGKT L KA+A + F I V
Sbjct: 180 LYKQIGIDP-----PRGVLLYGPPGTGKTMLAKAVANHTTAAF---------IRVVGSEF 225
Query: 244 FSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 303
K+ E ++V +F+ + +E + IDEV+++A AR A +G++ + R++
Sbjct: 226 VQKYLGEGPRMVRDVFR-----LAKENAPAIIFIDEVDAIATARFDAQTGAD-REVQRIL 279
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCV 361
LL Q+D NV ++ +N +D A + R D K P + + + + C
Sbjct: 280 MELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT 339
Query: 362 QEL 364
++
Sbjct: 340 SKM 342
>AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |
chr1:20065921-20068324 REVERSE LENGTH=426
Length = 426
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F K G+DP + VL +GPPGTGKT L +A+A + F I V L
Sbjct: 194 FVKLGIDP-----PKGVLCYGPPGTGKTLLARAVANRTDACF---------IRVIGSELV 239
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 304
K+ E ++V +LFQ + V DEV+++ AR G + ++ R +
Sbjct: 240 QKYVGEGARMVRELFQ-----MARSKKACIVFFDEVDAIGGARFDDGVGGD-NEVQRTML 293
Query: 305 ALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
++ QLD + N+ +L +N +D A + R D K G P L++R +I +
Sbjct: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFK 349
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 162 WESLIYESGLK--QRLLRYAASALLFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALA 219
WES+ GL+ ++LL+ A + + L W I LL GPPGTGKT L KA+A
Sbjct: 111 WESI---KGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGI-LLFGPPGTGKTMLAKAVA 166
Query: 220 QKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDE 279
+ + F ++A S+ SKW +S KL+ LF + + +DE
Sbjct: 167 TECNTTF---------FNISASSVVSKWRGDSEKLIRVLFDLARHHAPST-----IFLDE 212
Query: 280 VESLAAARKAALSGSEPSDSIRVVNALLTQLDKL-KSAPNVIILTTSNITAAIDIAFVDR 338
++++ + R SE S R+ LL Q+D L K+ V +L +N+ +D A + R
Sbjct: 213 IDAIISQR-GGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRR 271
Query: 339 ADIKAYVGPPTLQAR---YEIL 357
+ + V P +AR +E+L
Sbjct: 272 LEKRILVPLPDPEARRGMFEML 293
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 162 WESLIYESGLK--QRLLRYAASALLFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALA 219
WES+ GL+ ++LL+ A + + L W I LL GPPGTGKT L KA+A
Sbjct: 102 WESI---KGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGI-LLFGPPGTGKTMLAKAVA 157
Query: 220 QKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDE 279
+ + F ++A S+ SKW +S KL+ LF + + +DE
Sbjct: 158 TECNTTF---------FNISASSVVSKWRGDSEKLIRVLFDLARHHAPST-----IFLDE 203
Query: 280 VESLAAARKAALSGSEPSDSIRVVNALLTQLDKL-KSAPNVIILTTSNITAAIDIAFVDR 338
++++ + R SE S R+ LL Q+D L K+ V +L +N+ +D A + R
Sbjct: 204 IDAIISQR-GGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRR 262
Query: 339 ADIKAYVGPPTLQAR---YEIL 357
+ + V P +AR +E+L
Sbjct: 263 LEKRILVPLPDPEARRGMFEML 284
>AT4G04910.1 | Symbols: NSF | AAA-type ATPase family protein |
chr4:2489696-2495666 REVERSE LENGTH=742
Length = 742
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 91/177 (51%), Gaps = 15/177 (8%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLF- 259
+LL GPPGTGKT + + + + L N + P VN + SK+ E+ K V LF
Sbjct: 253 MLLFGPPGTGKTLMARQIGKML----NGKDPKI----VNGPEVLSKFVGETEKNVRDLFA 304
Query: 260 --QKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAP 317
++ Q + + L ++ DE++++ +R + G+ DSI VN LLT++D +++
Sbjct: 305 DAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSI--VNQLLTKIDGVEALN 362
Query: 318 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQELIRSGILAS 372
NV+++ +N +D A + R +++ + P R +IL+ ++ + L +
Sbjct: 363 NVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGT 419
>AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13821263-13823083
FORWARD LENGTH=398
Length = 398
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 26/174 (14%)
Query: 194 LVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGK 253
L+ + VLL+GPPGTGKT L KA+A++ F I V +L SKWF ++ K
Sbjct: 115 LLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVF---------INVRVSNLMSKWFGDAQK 165
Query: 254 LVAKLFQ---KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQL 310
LV+ +F K+Q + + IDEVES R++ ++ + +
Sbjct: 166 LVSAVFSLAYKLQPAI--------IFIDEVESFLGQRRS----TDHEAMANMKTEFMALW 213
Query: 311 DKLKSAPN--VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQ 362
D + P+ V++L +N + +D A + R +G P + R EIL+ ++
Sbjct: 214 DGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEILKVTLK 267
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 26/167 (15%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLL+GPPGTGKT L KA+A R I V +L SKWF ++ KLV+ +F
Sbjct: 125 VLLYGPPGTGKTMLAKAIA---------RESEAVFINVKVSNLMSKWFGDAQKLVSAVFS 175
Query: 261 ---KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAP 317
K+Q + + IDEV+S R++ + +E +++ + D +
Sbjct: 176 LAYKLQPAI--------IFIDEVDSFLGQRRS--TDNEAMSNMKT--EFMALWDGFTTDQ 223
Query: 318 N--VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQ 362
N V++L +N + +D A + R +G P Q R +IL+ ++
Sbjct: 224 NARVMVLAATNRPSELDEAILRRFPQSFEIGMPDCQERAQILKVVLK 270
>AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453
REVERSE LENGTH=941
Length = 941
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLL+GPPGTGKT L KA+A + S+ F + V L + + ES K V +F+
Sbjct: 694 VLLYGPPGTGKTLLAKAVATECSLNF---------LSVKGPELINMYIGESEKNVRDIFE 744
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLK-SAPNV 319
K + + DE++SLA AR A SG RVV+ +L ++D L S+ ++
Sbjct: 745 KAR-----SARPCVIFFDELDSLAPARGA--SGDSGGVMDRVVSQMLAEIDGLSDSSQDL 797
Query: 320 IILTTSNITAAIDIAFV--DRADIKAYVG 346
I+ SN ID A + R D YVG
Sbjct: 798 FIIGASNRPDLIDPALLRPGRFDKLLYVG 826
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 22/187 (11%)
Query: 184 LFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSL 243
LF + G+ P + VLL+GPPGTGKT L +A+A + F ++V + ++
Sbjct: 164 LFLRVGIKP-----PKGVLLYGPPGTGKTLLARAIASNIDANF---------LKVVSSAI 209
Query: 244 FSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 303
K+ ES +L+ ++F +E + +DE++++ R+ + S + R +
Sbjct: 210 IDKYIGESARLIREMFNYAREH-----QPCIIFMDEIDAI-GGRRFSEGTSADREIQRTL 263
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCV 361
LL QLD V ++ +N +D A + R D K + P Q+R EIL+
Sbjct: 264 MELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 323
Query: 362 QELIRSG 368
+ + G
Sbjct: 324 SGIAKHG 330
>AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A |
chr4:14312369-14314386 FORWARD LENGTH=443
Length = 443
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
V+L+G PGTGKT L KA+A S F + V L K+ + KLV +LF+
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATF---------LRVVGSELIQKYLGDGPKLVRELFR 275
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
V ++ + V IDE++++ R A SG E + R + LL QLD S +V
Sbjct: 276 -----VADDLSPSIVFIDEIDAVGTKRYDAHSGGE-REIQRTMLELLNQLDGFDSRGDVK 329
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDCKN 378
++ +N ++D A + R D K P ++ R I + ++ S ++
Sbjct: 330 VILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLS---------ED 380
Query: 379 VMLPNYANAKERLSAPDF 396
V L + K+ S D
Sbjct: 381 VNLEEFVMTKDEFSGADI 398
>AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=598
Length = 598
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 31/202 (15%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F + G+DP + VL +GPPG+GKT + +A+A + F I V L
Sbjct: 365 FVRLGIDP-----PKGVLCYGPPGSGKTLVARAVANRTGACF---------IRVVGSELV 410
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 304
K+ E ++V +LFQ + + DE++++ AR GS+ ++ R +
Sbjct: 411 QKYIGEGARMVRELFQ-----MARSKKACILFFDEIDAIGGARFDDGVGSD-NEVQRTML 464
Query: 305 ALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR---- 358
+L QLD + N+ +L +N +D A + R D K P L+ R +I +
Sbjct: 465 EILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTR 524
Query: 359 --SCVQELIRSGILASFQDCKN 378
SC ++ IR +LA C N
Sbjct: 525 TMSCERD-IRFELLAGL--CPN 543
>AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=599
Length = 599
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 31/202 (15%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F + G+DP + VL +GPPG+GKT + +A+A + F I V L
Sbjct: 366 FVRLGIDP-----PKGVLCYGPPGSGKTLVARAVANRTGACF---------IRVVGSELV 411
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 304
K+ E ++V +LFQ + + DE++++ AR GS+ ++ R +
Sbjct: 412 QKYIGEGARMVRELFQ-----MARSKKACILFFDEIDAIGGARFDDGVGSD-NEVQRTML 465
Query: 305 ALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR---- 358
+L QLD + N+ +L +N +D A + R D K P L+ R +I +
Sbjct: 466 EILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTR 525
Query: 359 --SCVQELIRSGILASFQDCKN 378
SC ++ IR +LA C N
Sbjct: 526 TMSCERD-IRFELLAGL--CPN 544
>AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077713 REVERSE LENGTH=620
Length = 620
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 31/202 (15%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F + G+DP + VL +GPPG+GKT + +A+A + F I V L
Sbjct: 387 FVRLGIDP-----PKGVLCYGPPGSGKTLVARAVANRTGACF---------IRVVGSELV 432
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 304
K+ E ++V +LFQ + + DE++++ AR GS+ ++ R +
Sbjct: 433 QKYIGEGARMVRELFQ-----MARSKKACILFFDEIDAIGGARFDDGVGSD-NEVQRTML 486
Query: 305 ALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR---- 358
+L QLD + N+ +L +N +D A + R D K P L+ R +I +
Sbjct: 487 EILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTR 546
Query: 359 --SCVQELIRSGILASFQDCKN 378
SC ++ IR +LA C N
Sbjct: 547 TMSCERD-IRFELLAGL--CPN 565
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VL+ GPPGTGKT L KA+A + F V++ +L SKW ES ++V LF
Sbjct: 275 VLMFGPPGTGKTLLAKAVATECGTTF---------FNVSSATLASKWRGESERMVRCLFD 325
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKL-KSAPN- 318
+ + IDE++SL +R + E S RV + LL Q+D + +A N
Sbjct: 326 LARAYAPST-----IFIDEIDSLCNSRGGS---GEHESSRRVKSELLVQVDGVSNTATNE 377
Query: 319 ------VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEIL 357
V++L +N ID A R + + Y+ P ++R ++
Sbjct: 378 DGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKALI 422
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GPPGTGKT L KA+A++ F I ++ S+ SKWF E K V +F
Sbjct: 858 ILLFGPPGTGKTMLAKAVAKEADANF---------INISMSSITSKWFGEGEKYVKAVFS 908
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSA--PN 318
+M + +DEV+S+ R+ E S ++ N + D L +
Sbjct: 909 LASKMSPS-----VIFVDEVDSMLGRREHP---REHEASRKIKNEFMMHWDGLTTQERER 960
Query: 319 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 358
V++L +N +D A + R + VG P R IL+
Sbjct: 961 VLVLAATNRPFDLDEAVIRRLPRRLMVGLPDTSNRAFILK 1000
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 184 LFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSL 243
LF + G+ P + VLL+GPPGTGKT L +A+A + F ++V + ++
Sbjct: 164 LFLRVGIKP-----PKGVLLYGPPGTGKTLLARAIASNIDANF---------LKVVSSAI 209
Query: 244 FSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 303
K+ ES +L+ ++F +E + +DE++++ R+ + S + R +
Sbjct: 210 IDKYIGESARLIREMFNYAREH-----QPCIIFMDEIDAI-GGRRFSEGTSADREIQRTL 263
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
LL QLD + V ++ +N +D A + R D K + P Q+R +IL+
Sbjct: 264 MELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILK 320
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 194 LVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGK 253
L + +LL GPPGTGKT L KA+A + F I ++ S+ SKWF E K
Sbjct: 975 LTKPTKGILLFGPPGTGKTMLAKAVATEAGANF---------INISMSSITSKWFGEGEK 1025
Query: 254 LVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKL 313
V +F ++ + +DEV+S+ R+ + E ++ N + D L
Sbjct: 1026 YVKAVFSLASKIAPS-----VIFVDEVDSMLGRRE---NPGEHEAMRKMKNEFMINWDGL 1077
Query: 314 --KSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILA 371
K V++L +N +D A + R + V P R +IL S ILA
Sbjct: 1078 RTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKIL---------SVILA 1128
Query: 372 SFQDCKNVMLPNYANAKERLSAPDFHEPDASIQLC--------KQLLETAEACEGMSGRS 423
+ ++V L AN + S D LC +++LE + ++
Sbjct: 1129 KEEMAEDVDLEAIANMTDGYSGSDLK------NLCVTAAHLPIREILEKEKKERSVAQAE 1182
Query: 424 LRKLPFLAHAALANPFDCNPIK 445
R +P L + P + N K
Sbjct: 1183 NRAMPQLYSSTDVRPLNMNDFK 1204
>AT2G20140.1 | Symbols: | AAA-type ATPase family protein |
chr2:8692736-8694837 FORWARD LENGTH=443
Length = 443
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
V+L+G PGTGKT L KA+A S F + V L K+ + KLV +LF+
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATF---------LRVVGSELIQKYLGDGPKLVRELFR 275
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
V ++ + V IDE++++ R A SG E + R + LL QLD S +V
Sbjct: 276 -----VADDLSPSIVFIDEIDAVGTKRYDANSGGE-REIQRTMLELLNQLDGFDSRGDVK 329
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
++ +N ++D A + R D K P ++ R I +
Sbjct: 330 VILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ 369
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GPPGTGKT + KA+A + F ++A SL SKW E KLV LF
Sbjct: 235 LLLFGPPGTGKTMIGKAIAGEAKATF---------FYISASSLTSKWIGEGEKLVRALFG 285
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAP-NV 319
V + +DE++SL + RK S E S R+ L +++ S +
Sbjct: 286 -----VASCRQPAVIFVDEIDSLLSQRK---SDGEHESSRRLKTQFLIEMEGFDSGSEQI 337
Query: 320 IILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDCKNV 379
+++ +N +D A R + Y+ P+ +AR I+++ ++ + G+ D N+
Sbjct: 338 LLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLK---KDGLFTLSDDDMNI 394
Query: 380 M 380
+
Sbjct: 395 I 395
>AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5088487-5095482
REVERSE LENGTH=1954
Length = 1954
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 155 AKEFDGMWESLIYESGLKQRLLRYAASALLFTKKGVDPFLVSWNRIVLLHGPPGTGKTSL 214
K F+G W+S+ G+ Q + LL+ + D ++ R +LLHG PGTGKT +
Sbjct: 712 GKAFEG-WDSVAGLEGVTQCMKEVVLIPLLYPEF-FDNLGLTPPRGILLHGHPGTGKTLV 769
Query: 215 CKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVF 274
+AL L+ R N R + K+ ++ + + LFQ V E+
Sbjct: 770 VRALIGSLA-RGNRRIAY---FARKGADCLGKYVGDAERQLRLLFQ-----VAEKCQPSI 820
Query: 275 VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 334
+ DE++ LA R + S VV+ LL LD LKS +V+++ +N AID A
Sbjct: 821 IFFDEIDGLAPKRSRQQDQTHSS----VVSTLLALLDGLKSRGSVVVIGATNYPDAIDPA 876
Query: 335 FV--DRADIKAYVGPPTLQARYEIL 357
R D + Y P++ R I+
Sbjct: 877 LRRPGRFDREIYFPLPSVDDRAAII 901
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 |
chr5:4950411-4952777 REVERSE LENGTH=688
Length = 688
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAK-LF 259
VLL GPPGTGKT L KA+A + + P L + S F + F G A+ LF
Sbjct: 260 VLLTGPPGTGKTLLAKAIAGEAGV------PFFSL----SGSEFIEMFVGVGASRARDLF 309
Query: 260 QKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNV 319
K + + V IDE++++ R + G + + +N +LT++D V
Sbjct: 310 NKAK-----ANSPCIVFIDEIDAVGRMRGTGIGGGN-DEREQTLNQILTEMDGFAGNTGV 363
Query: 320 IILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
I++ +N +D A + R D + VG P ++ R EIL+
Sbjct: 364 IVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILK 404
>AT4G23940.1 | Symbols: | FtsH extracellular protease family |
chr4:12437108-12441841 FORWARD LENGTH=946
Length = 946
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 173 QRLLRYAASALLFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPH 232
Q L++Y + LF K G+ P VLL GPPG GKT + KA+A + + F +
Sbjct: 443 QELVKYLKNPDLFDKMGIKP-----PHGVLLEGPPGCGKTLVAKAIAGEAGVPF-YQMAG 496
Query: 233 CQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEE--GNLVFVLIDEVESLAAARKAA 290
+ +EV LV +I+++ + + IDE+++LA R+
Sbjct: 497 SEFVEV---------------LVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGI 541
Query: 291 LSGSEPSDSI---------RVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRA 339
E SD + +N LL +LD + VI L +N +D A + R
Sbjct: 542 F--KENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRF 599
Query: 340 DIKAYVGPPTLQARYEILR 358
D K V PP + R +IL+
Sbjct: 600 DRKIRVRPPNAKGRLDILK 618
>AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174692-13177064 FORWARD LENGTH=695
Length = 695
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLL GPPGTGKT L KA+A + + F ++ + V LF+
Sbjct: 263 VLLIGPPGTGKTLLAKAIAGEAGVPF---------FSISGSEFVEMFVGVGASRVRDLFK 313
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
K +E V +DE++++ R + G + + +N LLT++D + VI
Sbjct: 314 KAKENAP-----CIVFVDEIDAVGRQRGTGIGGGN-DEREQTLNQLLTEMDGFEGNTGVI 367
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
++ +N +D A + R D + V P ++ R +IL+
Sbjct: 368 VVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK 407
>AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 |
chr1:1960214-1962525 REVERSE LENGTH=685
Length = 685
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLL GPPGTGKT L KA+A + + F ++ + V LF+
Sbjct: 256 VLLVGPPGTGKTLLAKAIAGEAGVPF---------FSISGSEFVEMFVGVGASRVRDLFK 306
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
K +E V +DE++++ R + G + + +N LLT++D + VI
Sbjct: 307 KAKENAP-----CIVFVDEIDAVGRQRGTGIGGGN-DEREQTLNQLLTEMDGFEGNTGVI 360
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
++ +N +D A + R D + V P ++ R +IL+
Sbjct: 361 VVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILK 400
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GPPGTGKT L KA+A + F I ++ S+ SKWF E K V +F
Sbjct: 1001 ILLFGPPGTGKTMLAKAVATEAGANF---------INISMSSITSKWFGEGEKYVKAVFS 1051
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKL--KSAPN 318
++ + +DEV+S+ R+ + E ++ N + D L K
Sbjct: 1052 LASKIAPS-----VIFVDEVDSMLGRRE---NPGEHEAMRKMKNEFMVNWDGLRTKDRER 1103
Query: 319 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDCKN 378
V++L +N +D A + R + V P R +IL S ILA + +
Sbjct: 1104 VLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNRSKIL---------SVILAKEEIAPD 1154
Query: 379 VMLPNYANAKERLSAPDF 396
V L AN + S D
Sbjct: 1155 VDLEAIANMTDGYSGSDL 1172
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 202 LLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESG-KLVAKLFQ 260
LL GPPGTGKT L +A+A + + F C A S F + F G V LF+
Sbjct: 287 LLVGPPGTGKTLLARAVAGEAGVPFF----SC------AASEFVELFVGVGASRVRDLFE 336
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
K + V IDE++++ R A + G + + +N LLT++D VI
Sbjct: 337 KAKSKAP-----CIVFIDEIDAVGRQRGAGMGGGN-DEREQTINQLLTEMDGFSGNSGVI 390
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
+L +N +D A + R D + V P + R +IL+
Sbjct: 391 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILK 430
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Length = 1210
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 33/178 (18%)
Query: 193 FLVSWN----RIVLLHGPPGTGKTSLCKALA-------QKLSIRFNLRYPHCQLIEVNAH 241
F S++ R VLL GPPGTGKT + +ALA QK+S F +R
Sbjct: 406 FFASYSITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVS--FYMR---------KGA 454
Query: 242 SLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIR 301
+ SKW E+ + + LF++ Q + +++F DE++ LA R + S
Sbjct: 455 DVLSKWVGEAERQLKLLFEEAQ---RNQPSIIF--FDEIDGLAPVRSSKQEQIHNS---- 505
Query: 302 VVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 357
+V+ LL +D L S V+++ +N AID A R D + P +AR EIL
Sbjct: 506 IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEIL 563
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 202 LLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESG-KLVAKLFQ 260
LL GPPGTGKT L +A+A + + F C A S F + F G V LF+
Sbjct: 299 LLVGPPGTGKTLLARAVAGEAGVPFF----SC------AASEFVELFVGVGASRVRDLFE 348
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
K + V IDE++++ R A + G + + +N LLT++D VI
Sbjct: 349 KAKSKAP-----CIVFIDEIDAVGRQRGAGMGGGN-DEREQTINQLLTEMDGFSGNSGVI 402
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
+L +N +D A + R D + V P + R +IL+
Sbjct: 403 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 442
>AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle
triple-A ATPase 5A | chr3:1603540-1605993 FORWARD
LENGTH=424
Length = 424
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F K GV P + VLL+GPPGTGKT + +A A + + F L+ QL+++
Sbjct: 197 FEKLGVRP-----PKGVLLYGPPGTGKTLMARACAAQTNATF-LKLAGPQLVQM------ 244
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAAR-KAALSGSEPSDSIRVV 303
+ + KLV FQ +E + IDE++++ R + +SG + R +
Sbjct: 245 --FIGDGAKLVRDAFQLAKEKAP-----CIIFIDEIDAIGTKRFDSEVSGD--REVQRTM 295
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
LL QLD S + ++ +N +D A + R D K PT +AR IL+
Sbjct: 296 LELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ 352
>AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein |
chr3:5521187-5524995 REVERSE LENGTH=876
Length = 876
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GPPG GKT L KA+A + + F ++A + V L+Q
Sbjct: 446 ILLCGPPGVGKTLLAKAVAGEAGVNF---------FSISASQFVEIYVGVGASRVRALYQ 496
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
+ +E V IDE++++ R + GS + +N LL LD + VI
Sbjct: 497 EARENAPS-----VVFIDELDAVGRER-GLIKGSGGQERDATLNQLLVSLDGFEGRGEVI 550
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
+ ++N +D A V R D K ++ P L R EIL+
Sbjct: 551 TIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQ 590
>AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit
RPT5B | chr1:2936675-2939258 REVERSE LENGTH=423
Length = 423
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 24/177 (13%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F K G+ P + VLL+GPPGTGKT + +A A + + F L+ QL+++
Sbjct: 196 FEKLGIRP-----PKGVLLYGPPGTGKTLMARACAAQTNATF-LKLAGPQLVQM------ 243
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAAR-KAALSGSEPSDSIRVV 303
+ + KLV F ++ +E + + IDE++++ R + +SG R +
Sbjct: 244 --FIGDGAKLVRDAF-----LLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQ--RTM 294
Query: 304 NALLTQLDKLKSAPNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
LL QLD S + ++ +N +D A + R D K PT +AR IL+
Sbjct: 295 LELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQ 351
>AT3G02450.1 | Symbols: | cell division protein ftsH, putative |
chr3:502876-505030 REVERSE LENGTH=622
Length = 622
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R VLL GPPGTGKT L +A+A + + F V+A + + L
Sbjct: 368 RGVLLVGPPGTGKTLLARAVAGEAGVPF---------FSVSASEFVELFVGRGAARIRDL 418
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F + + + + IDE++++ R + + + + +N LLT++D +S
Sbjct: 419 FNAAR-----KNSPSIIFIDELDAVGGKRGRSFN----DERDQTLNQLLTEMDGFESDTK 469
Query: 319 VIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEIL 357
VI++ +N A+D A R K V P + R +IL
Sbjct: 470 VIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKIL 510
>AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 |
chr2:11131939-11135126 REVERSE LENGTH=717
Length = 717
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 28/173 (16%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESG-KLVAKLF 259
VLL GPPGTGKT L +A+A + + F C + S F + F G + V LF
Sbjct: 263 VLLVGPPGTGKTMLARAIAGEAGVPFF----SC------SGSEFEEMFVGVGARRVRDLF 312
Query: 260 QKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRV---VNALLTQLDKLKSA 316
++ + + IDE++++ +R P D + +N +L +LD K
Sbjct: 313 SAAKKC-----SPCIIFIDEIDAIGGSRN-------PKDQQYMKMTLNQMLVELDGFKQN 360
Query: 317 PNVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQELIRS 367
+I++ +N ++D A V R D V P ++ R +IL S + +++++
Sbjct: 361 EGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKA 413
>AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 |
chr5:21563023-21567922 REVERSE LENGTH=806
Length = 806
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESG-KLVAKLF 259
+LL G PGTGKT L KA+A + + F R A S F + F G + V LF
Sbjct: 398 ILLTGAPGTGKTLLAKAIAGEAGVPFFYR----------AGSEFEEMFVGVGARRVRSLF 447
Query: 260 QKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNV 319
Q ++ + IDE++++ + RK + + ++ LL ++D + +
Sbjct: 448 QAAKKKAP-----CIIFIDEIDAVGSTRK-----QWEGHTKKTLHQLLVEMDGFEQNEGI 497
Query: 320 IILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQ 362
I++ +N+ +D A R D V P ++ R EIL +Q
Sbjct: 498 IVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQ 542
>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
chr3:17332999-17336613 FORWARD LENGTH=802
Length = 802
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R VLL G PGTGKT L KA+A + + F I +A + V L
Sbjct: 359 RGVLLVGLPGTGKTLLAKAVAGEAEVPF---------ISCSASEFVELYVGMGASRVRDL 409
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F + ++ E +++F IDE++++A +R + + +N LLT++D S
Sbjct: 410 FARAKK---EAPSIIF--IDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSA 464
Query: 319 VIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQE 363
VI+L +N +D A R D V P R ILR V +
Sbjct: 465 VIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSK 511
>AT1G45000.2 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=335
Length = 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 20/128 (15%)
Query: 184 LFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSL 243
LF + G+ P + VLL+GPPGTGKT L +A+A + F ++V + ++
Sbjct: 164 LFLRVGIKP-----PKGVLLYGPPGTGKTLLARAIASNIDANF---------LKVVSSAI 209
Query: 244 FSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 303
K+ ES +L+ ++F +E + +DE++++ R+ + S + R +
Sbjct: 210 IDKYIGESARLIREMFNYAREH-----QPCIIFMDEIDAI-GGRRFSEGTSADREIQRTL 263
Query: 304 NALLTQLD 311
LL QLD
Sbjct: 264 MELLNQLD 271
>AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 |
chr1:2305689-2309380 FORWARD LENGTH=813
Length = 813
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 202 LLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQK 261
LL GPPGTGKT L KA A + ++ F + ++ + V LFQ+
Sbjct: 364 LLVGPPGTGKTLLAKATAGESAVPF---------LSISGSDFMEMFVGVGPSRVRNLFQE 414
Query: 262 IQEMVEEEGNLVFVLIDEVESLAAAR-KAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
++ + IDE++++ AR + SG + +N LL ++D + V+
Sbjct: 415 ARQCAPS-----IIFIDEIDAIGRARGRGGFSGGN-DERESTLNQLLVEMDGFGTTAGVV 468
Query: 321 ILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQEL 364
+L +N +D A + R D + + P ++ R +I + ++++
Sbjct: 469 VLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKI 514
>AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 |
chr5:4950411-4952771 REVERSE LENGTH=709
Length = 709
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAK-LF 259
VLL GPPGTGKT L KA+A + + P L + S F + F G A+ LF
Sbjct: 258 VLLTGPPGTGKTLLAKAIAGEAGV------PFFSL----SGSEFIEMFVGVGASRARDLF 307
Query: 260 QKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNV 319
K + + V IDE++++ R + G + + +N +LT++D V
Sbjct: 308 NKAK-----ANSPCIVFIDEIDAVGRMRGTGIGGGN-DEREQTLNQILTEMDGFAGNTGV 361
Query: 320 IILTTSNITAAIDIAFV--DRADIKA--YVGPPTLQARYEILRSCVQEL 364
I++ +N +D A + R D + + P R+ I+ +C +++
Sbjct: 362 IVIAATNRPEILDSALLRPGRFDRQVCWLILKPNKSNRFGIMSTCFKQV 410
>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
chr5:23770080-23773719 REVERSE LENGTH=806
Length = 806
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 258
R VLL G PGTGKT L KA+A + + F I +A + V L
Sbjct: 363 RGVLLVGLPGTGKTLLAKAVAGESDVPF---------ISCSASEFVELYVGMGASRVRDL 413
Query: 259 FQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPN 318
F + ++ E +++F IDE++++A +R + + +N LLT++D S+
Sbjct: 414 FARAKK---EAPSIIF--IDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSA 468
Query: 319 VIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQE 363
VI+L +N +D A R D V P R IL+ V +
Sbjct: 469 VIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSK 515
>AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731
FORWARD LENGTH=1130
Length = 1130
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLL+GPPG GKT + A A S+RF I V L +K+ S + V +F
Sbjct: 881 VLLYGPPGCGKTHIVGAAAAACSLRF---------ISVKGPELLNKYIGASEQAVRDIFS 931
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVI 320
K + DE +S+A R +G + RVVN LT+LD ++ V
Sbjct: 932 KAAAAAP-----CILFFDEFDSIAPKRGHDNTGV----TDRVVNQFLTELDGVEVLTGVF 982
Query: 321 ILTTSNITAAIDIAF-----VDRADIKAYVGPPTLQARYEILRSCVQELI 365
+ ++ +D A +DR + + PP R EIL ++L+
Sbjct: 983 VFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPE---RLEILTVLSRKLL 1029
>AT4G36580.1 | Symbols: | AAA-type ATPase family protein |
chr4:17257958-17260661 FORWARD LENGTH=632
Length = 632
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 44/284 (15%)
Query: 163 ESLIYESGLKQRLLRYAASALLFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKL 222
+++I + LK+R+ R A A TK PF R ++ +GPPGTGKT + + +A+K
Sbjct: 353 DNVILHTSLKKRIERLA-RATANTKSHQAPF-----RNMMFYGPPGTGKTMVAREIARKS 406
Query: 223 SIRFNLRY-----PHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLI 277
+ + + P H +F W +S K G L+F I
Sbjct: 407 GLDYAMMTGGDVAPLGSQAVTKIHQIFD-WAKKSNK----------------GLLLF--I 447
Query: 278 DEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFVD 337
DE ++ R + SE S +NALL + + +++++ +N +D A D
Sbjct: 448 DEADAFLCERNSTYM-SEAQRS--ALNALLFRTG--DQSRDIVLVLATNRRGDLDSAVTD 502
Query: 338 RADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDCKNVMLPNYANAKERLSAPDFH 397
R D P + R+++L + + ++ G D P +++ ++LS
Sbjct: 503 RIDEVIEFPLPGEEERFKLLNLYLNKYLKMG------DNNEDTKPKWSHLFKKLSQKITV 556
Query: 398 EPDASIQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPFDC 441
E D + ++ + E A+ EG SGR + KL A + DC
Sbjct: 557 EEDLTDKV---ISEAAKKTEGFSGREIAKLVAGVQAGVYGRADC 597
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE LENGTH=1043
Length = 1043
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 31/160 (19%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
+LL GP GTGKT L KA+A + LI ++ S+WFSE K V +F
Sbjct: 791 ILLFGPSGTGKTMLAKAVATEAG---------ANLINMS----MSRWFSEGEKYVKAVFS 837
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKS--APN 318
++ + +DEVES+ + ++ N + D L++
Sbjct: 838 LASKISPS-----IIFLDEVESMLHRYR-----------LKTKNEFIINWDGLRTNEKER 881
Query: 319 VIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR 358
V++L +N +D A + R + VG P ++R +IL+
Sbjct: 882 VLVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKILK 921
>AT5G64580.1 | Symbols: | AAA-type ATPase family protein |
chr5:25817391-25821465 REVERSE LENGTH=855
Length = 855
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 201 VLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 260
VLLHGPPGTGKT L KA+A + + F N + + V LF
Sbjct: 352 VLLHGPPGTGKTLLAKAIAGEAGLPF---------FAANGTDFVEMFVGVAASRVKDLFA 402
Query: 261 KIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLK-SAPNV 319
+ + IDE++++ + R G ++ + + +LT++D K + V
Sbjct: 403 SSRSYAPS-----IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQV 457
Query: 320 IILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILR 358
+++ +N +D A + R D VG P+ R IL+
Sbjct: 458 LVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILK 498
>AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C |
chr3:231787-235057 FORWARD LENGTH=820
Length = 820
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 185 FTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLF 244
F K GV P +L HGPPG GKT L A+A + + F +++A +
Sbjct: 259 FKKIGVKP-----PSGILFHGPPGCGKTKLANAIANEAGVPF---------YKISATEVI 304
Query: 245 SKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN 304
S S + + +LF K V IDE++++ + R+ E R+V
Sbjct: 305 SGVSGASEENIRELFSKAYRTAPS-----IVFIDEIDAIGSKRENQQREMEK----RIVT 355
Query: 305 ALLTQLD-----KLKSAPN-----VIILTTSNITAAIDIAF--VDRADIKAYVGPPTLQA 352
LLT +D K+AP+ V+++ +N A+D A R + + + P A
Sbjct: 356 QLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDA 415
Query: 353 RYEILRSCVQELIRSG 368
R EIL Q+L G
Sbjct: 416 RAEILSVVAQKLRLEG 431
>AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease family
| chr3:1146943-1153341 REVERSE LENGTH=1320
Length = 1320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRYPHCQLIEVNAHSLFSK-WFSESGKLVAK 257
R VL+ G GTGKTSL A+A + R P ++ V A L + W +S V +
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAE------ARVP---VVNVEAQELEAGLWVGQSAANVRE 868
Query: 258 LFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAP 317
LFQ +++ V + +++ + A R ++ D +N LL +LD +
Sbjct: 869 LFQTARDLAP-----VIIFVEDFDLFAGVR-GKFVHTKQQDHESFINQLLVELDGFEKQD 922
Query: 318 NVIILTTSNITAAIDIAFV--DRADIKAYVGPPTLQARYEILRSCVQE 363
V+++ T+ ID A R D ++ PT R IL + +E
Sbjct: 923 GVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERILHNAAEE 970
>AT3G03060.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:692188-695424
FORWARD LENGTH=628
Length = 628
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 51/253 (20%)
Query: 199 RIVLLHGPPGTGKTSLCKALAQKLSIRFNLRY-----PHCQLIEVNAHSLFSKWFSESGK 253
R +LLHGPPGTGKT + LA+K + + L P H LF W +S +
Sbjct: 387 RNILLHGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGAQAVTKIHELFD-WGKKSKR 445
Query: 254 LVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAAR-KAALSGSEPSDSIRVVNALLTQLDK 312
G L+F IDE ++ R K +S ++ S +NALL +
Sbjct: 446 ----------------GLLLF--IDEADAFLCERNKTYMSEAQRS----ALNALLFRTG- 482
Query: 313 LKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILAS 372
+ ++++ +N +D A DR D P + R+++L +++ I
Sbjct: 483 -DQSKDIVLALATNRPGDLDSAVADRVDEVLEFPLPGEEERFKLLNLYLEKYIAEAG--- 538
Query: 373 FQDCKNVMLPNYANAKERLSAPDFHEPDASIQL---CKQLL-ETAEACEGMSGRSLRKLP 428
P+ +RL F + I++ ++LL E A EG SGR + KL
Sbjct: 539 ---------PSKPGLFDRL----FKKEQQKIEIKGVTEELLKEAAAKTEGFSGREIAKLM 585
Query: 429 FLAHAALANPFDC 441
AA+ DC
Sbjct: 586 ASVQAAVYGSEDC 598
>AT2G18330.1 | Symbols: | AAA-type ATPase family protein |
chr2:7965829-7968915 FORWARD LENGTH=636
Length = 636
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 41/284 (14%)
Query: 163 ESLIYESGLKQRLLRYAASALLFTKKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKL 222
E++I LK R+ R A A TK PF R ++ +GPPGTGKT + + +A+K
Sbjct: 356 ENVILHRSLKTRIERLA-RATANTKSHKAPF-----RNMMFYGPPGTGKTMVAREIARKS 409
Query: 223 SIRFNLRY-----PHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLI 277
+ + + P H +F W +S K G L+F I
Sbjct: 410 GLDYAMMTGGDVAPLGAQAVTKIHEIFD-WAKKSNK----------------GLLLF--I 450
Query: 278 DEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIAFVD 337
DE ++ R + SE S +NALL + + +++++ +N +D A D
Sbjct: 451 DEADAFLCERNSTYM-SEAQRS--ALNALLFRTG--DQSRDIVLVLATNRPGDLDSAVTD 505
Query: 338 RADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQDCKNVMLPNYANAKERLSAPDFH 397
R D P + R+++L+ + + + +D N+ N K++ S
Sbjct: 506 RIDEVIEFPLPGEEERFKLLKLYLNKYLMGDDKKGEKDS-NLKWSNL--FKKKKSQKITI 562
Query: 398 EPDASIQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPFDC 441
E D + Q+ K E A+ EG SGR + KL AA+ DC
Sbjct: 563 EGDLTDQVIK---EAAKKTEGFSGREIAKLVAGVQAAVYGRQDC 603