Miyakogusa Predicted Gene

Lj1g3v0296900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0296900.1 Non Chatacterized Hit- tr|J3M389|J3M389_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G1,31.29,0.000000000003,coiled-coil,NULL,CUFF.25533.1
         (268 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48260.1 | Symbols: WNK3 | with no lysine (K) kinase 3 | chr3...    68   7e-12

>AT3G48260.1 | Symbols: WNK3 | with no lysine (K) kinase 3 |
           chr3:17873012-17875220 REVERSE LENGTH=516
          Length = 516

 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 20/113 (17%)

Query: 1   MVEQLELTD-QDVSAIANMIDSEIQYHIPSWNPSETPVSRHEASPMANDS-----VTSTG 54
           MVE+L+LTD QD+S IA MID+EI  HIP W PS           + +DS     ++S  
Sbjct: 361 MVEELDLTDDQDISTIAKMIDTEIHSHIPDWTPSRL---------IGDDSAVQKCLSSPE 411

Query: 55  SLALEILPSGRKYWSDSPRALGGSSPLRHGP---SNLSN-EGDVSAREGSLTE 103
           +L L+  PSGRK+WS SP+A  G S     P   S LS+ +G ++   G + E
Sbjct: 412 TLHLDRFPSGRKFWS-SPKAGAGDSRSPFAPRSNSKLSSAQGPINQEVGVIVE 463