Miyakogusa Predicted Gene

Lj1g3v0293690.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0293690.1 Non Chatacterized Hit- tr|Q94I53|Q94I53_ORYSJ
Putative hydrolase OS=Oryza sativa subsp. japonica
GN=,75,0.0000000008,HAD-like,HAD-like domain; HAD-SF-IA-v3: HAD
hydrolase, family IA, variant 3,HAD-superfamily hydrolas,CUFF.25507.1
         (329 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48420.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   421   e-118
AT4G39970.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   155   4e-38
AT5G45170.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    75   9e-14
AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase f...    60   3e-09
AT4G21470.1 | Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FM...    59   6e-09
AT4G11570.2 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    50   2e-06
AT4G11570.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...    50   2e-06

>AT3G48420.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr3:17929743-17931551
           FORWARD LENGTH=319
          Length = 319

 Score =  421 bits (1083), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/239 (85%), Positives = 213/239 (89%)

Query: 91  FDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWP 150
           FDCDGVLVDTEKDGHRISFN TF+ER+L VTWDVDLYGELLKIGGGKERMTAYFNK GWP
Sbjct: 81  FDCDGVLVDTEKDGHRISFNDTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWP 140

Query: 151 ANAPSGEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNVAVCSTS 210
             AP  E ERKEF+A LHKQKTELFM LIEKKLLPLRPGVAKLVDQALT GV VAVCSTS
Sbjct: 141 EKAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTS 200

Query: 211 NEKAVSAIVSFLLGPERAEKIQIFAGDVVHRKKPDPAIYILAANTLGVEPSRCVVVEDSA 270
           NEKAVSAIVS LLGPERAEKI+IFAGDVV +KKPDPAIY LAA TLGV+PS+CVVVEDSA
Sbjct: 201 NEKAVSAIVSCLLGPERAEKIKIFAGDVVPKKKPDPAIYNLAAETLGVDPSKCVVVEDSA 260

Query: 271 IGLXXXXXXGMKCIITKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCGSLLEKQYVS 329
           IGL      GM CI+TKSGYTADEDF NADAVFD IGDPPEERFDLAFCGSLL KQ+VS
Sbjct: 261 IGLAAAKAAGMTCIVTKSGYTADEDFENADAVFDCIGDPPEERFDLAFCGSLLRKQFVS 319


>AT4G39970.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:18536678-18538429
           REVERSE LENGTH=316
          Length = 316

 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 16/228 (7%)

Query: 91  FDCDGVLVDTEKDGHRISFNQTFQEREL--------GVTWDVDLYGELLK-IGGGKERMT 141
           FDCDGV++++E + HR ++N  F   ++         + W ++ Y +    +GGGK +M 
Sbjct: 68  FDCDGVILESE-NLHRQAYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMR 126

Query: 142 AYFNKTGWPANA-----PSGEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKLVDQ 196
            YF + GWP +      P  + +R + + +L   KTE +  +I+   +  RPGV +L+D+
Sbjct: 127 WYFKENGWPTSTIFDSPPQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDE 186

Query: 197 ALTQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIQIF-AGDVVHRKKPDPAIYILAANT 255
           A   G  +AVCS + + +V   +  L+  ER + +  F AGD V  KKPDP+IYI AA  
Sbjct: 187 AKAAGKKLAVCSAATKSSVILCLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEK 246

Query: 256 LGVEPSRCVVVEDSAIGLXXXXXXGMKCIITKSGYTADEDFLNADAVF 303
           LGV    C+VVEDS IGL      GM C+IT +  T+D++F +A AV+
Sbjct: 247 LGVSVKDCLVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDAIAVY 294


>AT5G45170.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr5:18270555-18273129
           REVERSE LENGTH=372
          Length = 372

 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 91  FDCDGVLVDTEKDGHRISFNQTFQERELG-VTWDVDLYGELLKIGGGKER--MTAYFNKT 147
            + D V++DT    +R +FN  FQ+  L    W   +Y +LL+ G   E   +  YFN+ 
Sbjct: 83  LEVDRVMIDTW-SSNRQAFNVAFQKLGLDCANWPEPVYSDLLRKGAADEEKMLLLYFNQI 141

Query: 148 GWPANAPSGEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNVAVC 207
           GWP++ P+ E  +  FV S+ ++K       +  K LPLR GV + +D A  + V VA+ 
Sbjct: 142 GWPSSLPTSE--KASFVKSVLREKKNAMDEFLISKSLPLRSGVQEFIDNAYAEKVPVAIV 199

Query: 208 ST---SNEKAVSAIVSFLLGPERAEKIQIFAGDVVHR 241
           +    S +K   +IV  +LG ER   +++   + V +
Sbjct: 200 TAYCKSGDKVALSIVE-MLGQERLPNVKVIGDNEVEQ 235


>AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr1:21159775-21167092 FORWARD
           LENGTH=1055
          Length = 1055

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 22/202 (10%)

Query: 91  FDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWP 150
           FD DGVL ++E    R + +  F E  +GV   VD +   +  G  K             
Sbjct: 79  FDMDGVLCNSEDLSRRAAVD-VFTE--MGVEVTVDDFVPFMGTGEAKF------------ 123

Query: 151 ANAPSGEQERKEFVASLHKQKTELFMALIEKKLLPLR----PGVAKLVDQALTQGVNVAV 206
               +  +E K F     K++   F   ++K   P      PG  +LV +   +G+ VAV
Sbjct: 124 LGGVASVKEVKGFDPDAAKER--FFEIYLDKYAKPESGIGFPGALELVTECKNKGLKVAV 181

Query: 207 CSTSNEKAVSAIVSFLLGPERAEKIQIFAGDVVHRKKPDPAIYILAANTLGVEPSRCVVV 266
            S+++   V A +    G        I + D     KP P I++ AA  LGV  S CVV+
Sbjct: 182 ASSADRIKVDANLK-AAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 240

Query: 267 EDSAIGLXXXXXXGMKCIITKS 288
           ED+  G+       M+CI  K+
Sbjct: 241 EDALAGVQAAQAANMRCIAVKT 262


>AT4G21470.1 | Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FMN
           hydrolase | chr4:11431284-11433197 FORWARD LENGTH=379
          Length = 379

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 174 LFMALIEKKLLPLRPGVAKLVDQALTQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIQI 233
           LF A ++K  +   PG  +L+      GV VA+ S S+   + + +S+  G +    + I
Sbjct: 84  LFSAQMDK--IKSLPGANRLIRHLKCHGVPVALASNSSRANIESKISYHEGWKECFSV-I 140

Query: 234 FAGDVVHRKKPDPAIYILAANTLGVEPSRCVVVEDSAIGLXXXXXXGMKCIITKSGYTAD 293
              D V + KP P I++ AA  L  +P+ C+V+EDS  G+      G K I   S     
Sbjct: 141 VGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMAGKAAGTKVIAVPSLPKQT 200

Query: 294 EDFLNADAVFDFIGDPPEERFDL 316
             + +AD V + + D   E++ L
Sbjct: 201 HLYTSADEVINSLLDIRLEKWGL 223


>AT4G11570.2 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:7004743-7005864 FORWARD
           LENGTH=373
          Length = 373

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%)

Query: 164 VASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNVAVCSTSNEKAVSAIVSFLL 223
           V  + K+K E+F AL    +  LR G  + V+  +   + +A+ ST   + +   V  + 
Sbjct: 192 VRRMAKRKEEIFKAL-HGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGSI- 249

Query: 224 GPERAEKIQIFAGDVVHRKKPDPAIYILAANTLGVEPSRCVVVEDSAIGLXXXXXXGMKC 283
           G  +   + I A + V+R KPDP ++I AA  L   P RC+V  +S   +       MKC
Sbjct: 250 GIRKFFSV-IVASEDVYRGKPDPEMFIYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKC 308

Query: 284 IITKSGY 290
           +   S +
Sbjct: 309 VAVASKH 315


>AT4G11570.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:7004743-7005864 FORWARD
           LENGTH=373
          Length = 373

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%)

Query: 164 VASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNVAVCSTSNEKAVSAIVSFLL 223
           V  + K+K E+F AL    +  LR G  + V+  +   + +A+ ST   + +   V  + 
Sbjct: 192 VRRMAKRKEEIFKAL-HGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGSI- 249

Query: 224 GPERAEKIQIFAGDVVHRKKPDPAIYILAANTLGVEPSRCVVVEDSAIGLXXXXXXGMKC 283
           G  +   + I A + V+R KPDP ++I AA  L   P RC+V  +S   +       MKC
Sbjct: 250 GIRKFFSV-IVASEDVYRGKPDPEMFIYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKC 308

Query: 284 IITKSGY 290
           +   S +
Sbjct: 309 VAVASKH 315