Miyakogusa Predicted Gene

Lj1g3v0271570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0271570.1 Non Chatacterized Hit- tr|I1KC60|I1KC60_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.33,0,seg,NULL;
coiled-coil,NULL,CUFF.25481.1
         (489 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48500.1 | Symbols: PDE312, PTAC10 | Nucleic acid-binding, OB...   613   e-175
AT3G48500.2 | Symbols: PDE312, PTAC10 | Nucleic acid-binding, OB...   596   e-170

>AT3G48500.1 | Symbols: PDE312, PTAC10 | Nucleic acid-binding,
           OB-fold-like protein | chr3:17962209-17965408 FORWARD
           LENGTH=668
          Length = 668

 Score =  613 bits (1580), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 295/433 (68%), Positives = 342/433 (78%), Gaps = 6/433 (1%)

Query: 1   MQAKRVSVEEIENGVR----TETDDVCLDRYKVFLKQYKEWVEANKDRLEEESYEQDQDY 56
           + A+RV +E+++  +R       D +CL+R+KVFLKQYKEWVE NKDRLEEESY+ DQD+
Sbjct: 189 LMAERVWLEDLDKDLRVGEDATVDKMCLERFKVFLKQYKEWVEDNKDRLEEESYKLDQDF 248

Query: 57  HPGRRKRGKDYKEGMYELPFYYPGQICLGKVVNLHLYQGAFVDIGGVYDGWVPIKGNDWF 116
           +PGRRKRGKDY++GMYELPFYYPG +C G V  LHLYQGAFVDIGGV++GWVPIKGNDWF
Sbjct: 249 YPGRRKRGKDYEDGMYELPFYYPGMVCEGTVTTLHLYQGAFVDIGGVHEGWVPIKGNDWF 308

Query: 117 WIRHHITVGMNVFVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFQRAEDTNP 176
           WIRH I VGM+V VEITAKRDPYRFRFP+ELRFV PNIDH+IFN+FDFPPIF R  DTNP
Sbjct: 309 WIRHFIKVGMHVIVEITAKRDPYRFRFPLELRFVHPNIDHMIFNKFDFPPIFHRDGDTNP 368

Query: 177 DEVRRHCGRPPIPRKDPGDKPEEAPLLSNHPYVDKLWQINVAEQMILDDMETNPDKYRGK 236
           DE+RR CGRPP PRKDPG KPEE  LLS+HPYVDKLWQI+VAEQMIL D E NP KY GK
Sbjct: 369 DEIRRDCGRPPEPRKDPGSKPEEEGLLSDHPYVDKLWQIHVAEQMILGDYEANPAKYEGK 428

Query: 237 KLSXXXXXXXXXEESAVQYSKASYKNSVLQKMTLKTSVKXXXXXXXXXXXXXHIKLMKEA 296
           KLS         E+  ++Y +A YK + L K+ LKTSVK             H KLM EA
Sbjct: 429 KLSELSDDEDFDEQKDIEYGEAYYKKTKLPKVILKTSVKELDLEAALTERQHHNKLMMEA 488

Query: 297 KDRDEEYKITKLRRNIEMDEYDYMHWRRSFEEREALLRDISCRKALGLPLEEPGRYVDAS 356
           K R E YKI KLRRNIEMDEYD++HWRRS EEREALLRDIS R+ALGLPLEEPGRY   S
Sbjct: 489 KARGEGYKIDKLRRNIEMDEYDFLHWRRSLEEREALLRDISSRQALGLPLEEPGRYKPGS 548

Query: 357 YFGKGKYDPSSPLYRYDYWGEPKNSEKSRRERRTDTHNKAIVGKGTVWYEMSYEDCIKQQ 416
           +FGK +YDP+S LY+YDYWGEPKNSE S++ER  D HNK+IVGKG VWY+MSY+D IKQ 
Sbjct: 549 FFGKDQYDPTSALYQYDYWGEPKNSEISKQERMKDAHNKSIVGKGNVWYDMSYDDAIKQT 608

Query: 417 M--RREAQSMAQQ 427
           +  R+E  ++A Q
Sbjct: 609 IEKRKEGSTLASQ 621


>AT3G48500.2 | Symbols: PDE312, PTAC10 | Nucleic acid-binding,
           OB-fold-like protein | chr3:17962209-17965408 FORWARD
           LENGTH=697
          Length = 697

 Score =  596 bits (1537), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 295/462 (63%), Positives = 342/462 (74%), Gaps = 35/462 (7%)

Query: 1   MQAKRVSVEEIENGVR----TETDDVCLDRYKVFLKQYKEWVEANKDRLEEESYEQDQDY 56
           + A+RV +E+++  +R       D +CL+R+KVFLKQYKEWVE NKDRLEEESY+ DQD+
Sbjct: 189 LMAERVWLEDLDKDLRVGEDATVDKMCLERFKVFLKQYKEWVEDNKDRLEEESYKLDQDF 248

Query: 57  HPGRRKRGKDYKEGMYELPFYYPGQICLGKVVNLHLYQGAFVDIGGVYDGWVPIKGNDWF 116
           +PGRRKRGKDY++GMYELPFYYPG +C G V  LHLYQGAFVDIGGV++GWVPIKGNDWF
Sbjct: 249 YPGRRKRGKDYEDGMYELPFYYPGMVCEGTVTTLHLYQGAFVDIGGVHEGWVPIKGNDWF 308

Query: 117 WIRHHITVGMNVFVEIT-----------------------------AKRDPYRFRFPIEL 147
           WIRH I VGM+V VEIT                             AKRDPYRFRFP+EL
Sbjct: 309 WIRHFIKVGMHVIVEITVILRHIFFFRIYKNLNGNCFILLFLLFFQAKRDPYRFRFPLEL 368

Query: 148 RFVDPNIDHLIFNRFDFPPIFQRAEDTNPDEVRRHCGRPPIPRKDPGDKPEEAPLLSNHP 207
           RFV PNIDH+IFN+FDFPPIF R  DTNPDE+RR CGRPP PRKDPG KPEE  LLS+HP
Sbjct: 369 RFVHPNIDHMIFNKFDFPPIFHRDGDTNPDEIRRDCGRPPEPRKDPGSKPEEEGLLSDHP 428

Query: 208 YVDKLWQINVAEQMILDDMETNPDKYRGKKLSXXXXXXXXXEESAVQYSKASYKNSVLQK 267
           YVDKLWQI+VAEQMIL D E NP KY GKKLS         E+  ++Y +A YK + L K
Sbjct: 429 YVDKLWQIHVAEQMILGDYEANPAKYEGKKLSELSDDEDFDEQKDIEYGEAYYKKTKLPK 488

Query: 268 MTLKTSVKXXXXXXXXXXXXXHIKLMKEAKDRDEEYKITKLRRNIEMDEYDYMHWRRSFE 327
           + LKTSVK             H KLM EAK R E YKI KLRRNIEMDEYD++HWRRS E
Sbjct: 489 VILKTSVKELDLEAALTERQHHNKLMMEAKARGEGYKIDKLRRNIEMDEYDFLHWRRSLE 548

Query: 328 EREALLRDISCRKALGLPLEEPGRYVDASYFGKGKYDPSSPLYRYDYWGEPKNSEKSRRE 387
           EREALLRDIS R+ALGLPLEEPGRY   S+FGK +YDP+S LY+YDYWGEPKNSE S++E
Sbjct: 549 EREALLRDISSRQALGLPLEEPGRYKPGSFFGKDQYDPTSALYQYDYWGEPKNSEISKQE 608

Query: 388 RRTDTHNKAIVGKGTVWYEMSYEDCIKQQM--RREAQSMAQQ 427
           R  D HNK+IVGKG VWY+MSY+D IKQ +  R+E  ++A Q
Sbjct: 609 RMKDAHNKSIVGKGNVWYDMSYDDAIKQTIEKRKEGSTLASQ 650