Miyakogusa Predicted Gene
- Lj1g3v0268580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0268580.1 Non Chatacterized Hit- tr|Q9M151|Q9M151_ARATH
Putative uncharacterized protein AT4g01170
OS=Arabidop,38.97,0.00000000000004,seg,NULL,CUFF.25443.1
(462 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G01170.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 55 7e-08
AT1G21560.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 53 5e-07
AT1G21560.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 53 5e-07
AT1G21560.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 52 7e-07
>AT4G01170.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G07730.1); Has 211 Blast hits to 211 proteins
in 60 species: Archae - 0; Bacteria - 22; Metazoa - 50;
Fungi - 11; Plants - 77; Viruses - 0; Other Eukaryotes -
51 (source: NCBI BLink). | chr4:499497-500831 FORWARD
LENGTH=444
Length = 444
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 321 TPFVSSK-VYDSSWFENKMNPGDSKQFSADHSQFRRRLMECLQKPFDQQECDGFLDSVRK 379
TPFV+SK V D ++ G SK+ + + FR+ LM+ L++P+D++E V
Sbjct: 312 TPFVASKKVVD-------LDEG-SKKNESSITWFRKELMDVLKQPYDEEEMKQLHRDVSI 363
Query: 380 QTQMERHIELRGGVNKPYHVSGTVNKSYLELNPDLG---DVIAAIKEPHXXXXXXXXXXX 436
+M R ELR G Y +G + +SYLE PD ++ + +
Sbjct: 364 HRKMTRCRELRKGRGSVYE-TGELGQSYLESFPDFEKEYKLVVGVDDKARALKLLRGFFF 422
Query: 437 XXXXXSHPGVFKPW 450
SH GVFKPW
Sbjct: 423 YLKYVSHDGVFKPW 436
>AT1G21560.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G01170.1). | chr1:7555208-7556789 FORWARD
LENGTH=399
Length = 399
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 305 SDSDLIIIE--PDLFCEDTPFVSSKVYDSSWFENKMNPGDSKQFSADHSQFRRRLMECLQ 362
SDSD+I++ P L ED+PFV SK Y K+ D + +S FRR +M L+
Sbjct: 246 SDSDIIVVGDCPFLEEEDSPFVPSKSY-------KVIDLDEESSDQRNSWFRREIMNVLK 298
Query: 363 KPFDQQECDGFLDSVRKQTQMERHIELRGGVNKPYHVSGTVNKSYLELNPDLG-DVIAAI 421
+P+ E RHIELR G + + SYL+ PD + ++
Sbjct: 299 QPYTVTELKELHKEASVHGVSSRHIELRDGTEFSFPTNKK-KPSYLDRYPDFKKQYLDSL 357
Query: 422 KEPHXXXXXXXXXXXXXXXXS--HPGVFKPWLDKTCLE 457
+E + FKPWLD+ CL+
Sbjct: 358 REKDERKALNLLRGFIFYITNVVRDDAFKPWLDQECLK 395
>AT1G21560.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G01170.1). | chr1:7555208-7556789 FORWARD
LENGTH=399
Length = 399
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 305 SDSDLIIIE--PDLFCEDTPFVSSKVYDSSWFENKMNPGDSKQFSADHSQFRRRLMECLQ 362
SDSD+I++ P L ED+PFV SK Y K+ D + +S FRR +M L+
Sbjct: 246 SDSDIIVVGDCPFLEEEDSPFVPSKSY-------KVIDLDEESSDQRNSWFRREIMNVLK 298
Query: 363 KPFDQQECDGFLDSVRKQTQMERHIELRGGVNKPYHVSGTVNKSYLELNPDLG-DVIAAI 421
+P+ E RHIELR G + + SYL+ PD + ++
Sbjct: 299 QPYTVTELKELHKEASVHGVSSRHIELRDGTEFSFPTNKK-KPSYLDRYPDFKKQYLDSL 357
Query: 422 KEPHXXXXXXXXXXXXXXXXS--HPGVFKPWLDKTCLE 457
+E + FKPWLD+ CL+
Sbjct: 358 REKDERKALNLLRGFIFYITNVVRDDAFKPWLDQECLK 395
>AT1G21560.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G01170.1); Has 76 Blast hits to 76 proteins in
15 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi
- 2; Plants - 67; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr1:7555430-7556789 FORWARD
LENGTH=325
Length = 325
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 305 SDSDLIIIE--PDLFCEDTPFVSSKVYDSSWFENKMNPGDSKQFSADHSQFRRRLMECLQ 362
SDSD+I++ P L ED+PFV SK Y K+ D + +S FRR +M L+
Sbjct: 172 SDSDIIVVGDCPFLEEEDSPFVPSKSY-------KVIDLDEESSDQRNSWFRREIMNVLK 224
Query: 363 KPFDQQECDGFLDSVRKQTQMERHIELRGGVNKPYHVSGTVNK---SYLELNPDLG-DVI 418
+P+ E RHIELR G S NK SYL+ PD +
Sbjct: 225 QPYTVTELKELHKEASVHGVSSRHIELRDGT----EFSFPTNKKKPSYLDRYPDFKKQYL 280
Query: 419 AAIKEPHXXXXXXXXXXXXXXXXS--HPGVFKPWLDKTCLE 457
+++E + FKPWLD+ CL+
Sbjct: 281 DSLREKDERKALNLLRGFIFYITNVVRDDAFKPWLDQECLK 321