Miyakogusa Predicted Gene

Lj1g3v0267460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0267460.1 tr|I1MA99|I1MA99_SOYBN Uncharacterized protein
(Fragment) OS=Glycine max PE=3
SV=1,50,0.0000000000002,GUB_WAK_bind,Wall-associated receptor kinase
galacturonan-binding domain; seg,NULL,TC82562.path2.1
         (139 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21210.1 | Symbols: WAK4 | wall associated kinase 4 | chr1:74...    49   1e-06

>AT1G21210.1 | Symbols: WAK4 | wall associated kinase 4 |
           chr1:7424653-7427041 FORWARD LENGTH=738
          Length = 738

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 46  LPGCISSCGYVTNFPYPFGIGNSSSKPAQPCYLEPKFSLDCNDSKLYFRNLPVLDIAIEG 105
           LP C   CG VT   YPFG       P      +P F+L C +  L+++ L V++I+   
Sbjct: 25  LPRCPEKCGNVT-LEYPFGF-----SPGCWRAEDPSFNLSCVNENLFYKGLEVVEISHSS 78

Query: 106 QMDVMFNVTWVCYNT 120
           Q+ V++  +++CYN+
Sbjct: 79  QLRVLYPASYICYNS 93