Miyakogusa Predicted Gene

Lj1g3v0244620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0244620.1 Non Chatacterized Hit- tr|I1JGX7|I1JGX7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53193
PE,77.67,0,seg,NULL; no description,NULL; PREDICTED PROTEIN,NULL;
F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL,CUFF.25383.1
         (212 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334...   246   7e-66
AT4G24390.1 | Symbols:  | RNI-like superfamily protein | chr4:12...   239   1e-63
AT4G24390.2 | Symbols:  | RNI-like superfamily protein | chr4:12...   239   1e-63
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein...   176   1e-44
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436...   173   1e-43
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986...   172   2e-43
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ...   166   1e-41
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr...   120   8e-28

>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
           chr5:20334420-20336531 REVERSE LENGTH=619
          Length = 619

 Score =  246 bits (628), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 114/152 (75%), Positives = 132/152 (86%)

Query: 61  FPDQVLENVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATAR 120
           FPD VLENVLENVL FL SR DRNAASLVC+SW R EALTRSE+FIGNCYA+SP R T R
Sbjct: 50  FPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQR 109

Query: 121 FSRVRSVTVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAV 180
           F RVRS+ +KGKPRFADF+LMP DWGA+FAPW + +AQAYP LEK+ LKRM VTD+DLA+
Sbjct: 110 FKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLAL 169

Query: 181 VADSFSGFRELVLVCCEGFGTRGLAAVASKCR 212
           +ADSF GF+EL+LVCCEGFGT G++ VA+KCR
Sbjct: 170 LADSFPGFKELILVCCEGFGTSGISIVANKCR 201


>AT4G24390.1 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 109/151 (72%), Positives = 127/151 (84%)

Query: 62  PDQVLENVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATARF 121
           PD VLENVLENVL FL+SR DRNA SLVCRSW R EA TR E+FIGNCY++SP R   RF
Sbjct: 51  PDHVLENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRF 110

Query: 122 SRVRSVTVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAVV 181
            RVRS+ +KGKPRFADF+LMP +WGA F+PW  A A+AYPWLEK+HLKRM VTD+DLA++
Sbjct: 111 KRVRSLVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALL 170

Query: 182 ADSFSGFRELVLVCCEGFGTRGLAAVASKCR 212
           A+SF GF+EL LVCCEGFGT G+A VA+KCR
Sbjct: 171 AESFPGFKELTLVCCEGFGTSGIAIVANKCR 201


>AT4G24390.2 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 109/151 (72%), Positives = 127/151 (84%)

Query: 62  PDQVLENVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATARF 121
           PD VLENVLENVL FL+SR DRNA SLVCRSW R EA TR E+FIGNCY++SP R   RF
Sbjct: 51  PDHVLENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRF 110

Query: 122 SRVRSVTVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAVV 181
            RVRS+ +KGKPRFADF+LMP +WGA F+PW  A A+AYPWLEK+HLKRM VTD+DLA++
Sbjct: 111 KRVRSLVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALL 170

Query: 182 ADSFSGFRELVLVCCEGFGTRGLAAVASKCR 212
           A+SF GF+EL LVCCEGFGT G+A VA+KCR
Sbjct: 171 AESFPGFKELTLVCCEGFGTSGIAIVANKCR 201


>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
           chr3:23273479-23276181 REVERSE LENGTH=594
          Length = 594

 Score =  176 bits (445), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 81/146 (55%), Positives = 103/146 (70%)

Query: 67  ENVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATARFSRVRS 126
           E VLE+V  F+   +DRN+ SLVC+SW   E   R ++FIGNCYAVSP     RF +VRS
Sbjct: 11  EEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRS 70

Query: 127 VTVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAVVADSFS 186
           V +KGKP FADF+L+PD WG +  PW  A++ +Y WLE+I LKRM VTD+ L ++A SF 
Sbjct: 71  VELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFK 130

Query: 187 GFRELVLVCCEGFGTRGLAAVASKCR 212
            F+ LVL  CEGF T GLAA+A+ CR
Sbjct: 131 NFKVLVLSSCEGFSTDGLAAIAATCR 156


>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
           chr1:4368879-4370780 REVERSE LENGTH=577
          Length = 577

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/152 (51%), Positives = 112/152 (73%), Gaps = 4/152 (2%)

Query: 61  FPDQVLENVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATAR 120
           FPD+V+E+V +    F++S +DRN+ SLVC+SW + E  +R E+FIGNCYA++P R   R
Sbjct: 4   FPDEVIEHVFD----FVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRR 59

Query: 121 FSRVRSVTVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAV 180
           F  ++S+T+KGKP FADF+L+P +WG    PW  ALA++   LE++ LKRM VTDE L +
Sbjct: 60  FPCLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDL 119

Query: 181 VADSFSGFRELVLVCCEGFGTRGLAAVASKCR 212
           ++ SF+ F+ LVLV CEGF T GLA++A+ CR
Sbjct: 120 LSRSFANFKSLVLVSCEGFTTDGLASIAANCR 151


>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
           chr3:9868342-9870464 FORWARD LENGTH=575
          Length = 575

 Score =  172 bits (435), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/152 (51%), Positives = 111/152 (73%), Gaps = 4/152 (2%)

Query: 61  FPDQVLENVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATAR 120
           FPD+V+E+V +    F++S +DRNA SLVC+SW + E  +R ++FIGNCYA++P R   R
Sbjct: 4   FPDEVIEHVFD----FVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRR 59

Query: 121 FSRVRSVTVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAV 180
           F  ++S+T+KGKP FADF+L+P +WG    PW  ALA++   LE++ LKRM VTDE L +
Sbjct: 60  FPCLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLEL 119

Query: 181 VADSFSGFRELVLVCCEGFGTRGLAAVASKCR 212
           ++ SF  F+ LVLV CEGF T GLA++A+ CR
Sbjct: 120 LSRSFVNFKSLVLVSCEGFTTDGLASIAANCR 151


>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
           chr4:1405108-1407057 REVERSE LENGTH=585
          Length = 585

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/145 (53%), Positives = 100/145 (68%)

Query: 68  NVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATARFSRVRSV 127
            VLE++L F+ S  DRN+ SLVC+SW   E  TR  +F+GNCYAVSP   T RF  +RS+
Sbjct: 8   KVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPEMRSL 67

Query: 128 TVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAVVADSFSG 187
           T+KGKP FAD++L+PD WG +  PW  A+A     LE+I +KRM VTDE L  +A SF  
Sbjct: 68  TLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAASFKD 127

Query: 188 FRELVLVCCEGFGTRGLAAVASKCR 212
           F+ LVL  CEGF T G+AA+A+ CR
Sbjct: 128 FKVLVLTSCEGFSTDGIAAIAATCR 152


>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
           chr2:16672848-16675486 REVERSE LENGTH=592
          Length = 592

 Score =  120 bits (300), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 93/148 (62%), Gaps = 1/148 (0%)

Query: 66  LENVLENVLHFLSSRRDRNAASLVCRSWCRAEALTRSELFIGNCYAVSPRRATARFSRVR 125
           +++V+E V+ +++  +DR++ASLVCR W + ++ TR  + +  CY  +P R + RF  +R
Sbjct: 17  VDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLR 76

Query: 126 SVTVKGKPRFADFDLMPDDWGAHFAPWATALAQAYPWLEKIHLKRMSVTDEDLAVVADSF 185
           S+ +KGKPR A F+L+P++WG +  PW T ++     L+ +H +RM V+D DL  +A + 
Sbjct: 77  SLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKAR 136

Query: 186 S-GFRELVLVCCEGFGTRGLAAVASKCR 212
           +     L L  C GF T GL ++ + CR
Sbjct: 137 ADDLETLKLDKCSGFTTDGLLSIVTHCR 164