Miyakogusa Predicted Gene

Lj1g3v0244530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0244530.1 Non Chatacterized Hit- tr|I1P9U5|I1P9U5_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,70.97,0.0007,HSP20,Alpha crystallin/Hsp20 domain; no
description,NULL; HEAT-SHOCK PROTEIN 17,NULL; SMALL
HEAT-SHO,CUFF.25370.1
         (153 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59720.1 | Symbols: HSP18.2 | heat shock protein 18.2 | chr5:...   196   7e-51
AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily prot...   189   8e-49
AT3G46230.1 | Symbols: ATHSP17.4, HSP17.4 | heat shock protein 1...   188   9e-49
AT2G29500.1 | Symbols:  | HSP20-like chaperones superfamily prot...   177   2e-45
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...   171   2e-43
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...   153   3e-38
AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superfa...   104   2e-23
AT5G12020.1 | Symbols: HSP17.6II | 17.6 kDa class II heat shock ...    77   5e-15
AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily prot...    75   2e-14
AT5G12030.1 | Symbols: AT-HSP17.6A, HSP17.6, HSP17.6A | heat sho...    74   3e-14
AT2G19310.1 | Symbols:  | HSP20-like chaperones superfamily prot...    55   2e-08
AT1G54050.1 | Symbols:  | HSP20-like chaperones superfamily prot...    50   8e-07

>AT5G59720.1 | Symbols: HSP18.2 | heat shock protein 18.2 |
           chr5:24062632-24063117 FORWARD LENGTH=161
          Length = 161

 Score =  196 bits (497), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 100/159 (62%), Positives = 112/159 (70%), Gaps = 6/159 (3%)

Query: 1   MSLIPSFFGGRRSNVFDPFSQELWDPFEGF-----PVSN-SSACETTAIANTRVDWKETP 54
           MSLIPS FGGRRSNVFDPFSQ+LWDPFEGF      ++N S+A +  A  N RVDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 55  EAHVFSVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWHRVERSSGKFMRRFRL 114
           EAHVF  DLPGL          D +VLQISGERS+E E+K+DKWHRVER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 115 PENAKMDQVKAAMENGXXXXXXXXXXXXXXXXXSIQISG 153
           PENAKM++VKA MENG                 SI ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159


>AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19980510-19980983 FORWARD LENGTH=157
          Length = 157

 Score =  189 bits (479), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 110/157 (70%), Gaps = 4/157 (2%)

Query: 1   MSLIPSFFGGRRSNVFDPFSQELWDPFEGF----PVSNSSACETTAIANTRVDWKETPEA 56
           MSLIPS FGGRR+NVFDPFS +++DPFEGF     ++N+ A +  A  N +VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 57  HVFSVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWHRVERSSGKFMRRFRLPE 116
           HVF  DLPGL          DG++LQISGERS E E+K+DKWHRVERSSGKF RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 117 NAKMDQVKAAMENGXXXXXXXXXXXXXXXXXSIQISG 153
           NAKM+++KA+MENG                 SI ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157


>AT3G46230.1 | Symbols: ATHSP17.4, HSP17.4 | heat shock protein 17.4
           | chr3:16984263-16984733 REVERSE LENGTH=156
          Length = 156

 Score =  188 bits (478), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 91/156 (58%), Positives = 110/156 (70%), Gaps = 3/156 (1%)

Query: 1   MSLIPSFFGGRRSNVFDPFSQELWDPFEGF---PVSNSSACETTAIANTRVDWKETPEAH 57
           MSL+PSFFGGRR+NVFDPFS ++WDPFEGF    ++N+ A +  A  N +VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 58  VFSVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWHRVERSSGKFMRRFRLPEN 117
           VF  D+PGL          DG++LQISGERS E E+K D WHRVERSSGKFMRRFRLPEN
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 118 AKMDQVKAAMENGXXXXXXXXXXXXXXXXXSIQISG 153
           AK+++VKA+MENG                 S+ ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156


>AT2G29500.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr2:12633279-12633740 REVERSE LENGTH=153
          Length = 153

 Score =  177 bits (449), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 105/154 (68%), Gaps = 2/154 (1%)

Query: 1   MSLIPSFFGG-RRSNVFDPFSQELWDPFEGFPVSNSSACETTAIANTRVDWKETPEAHVF 59
           MS+IPSFF   RRSN+FDPFS ++WDPF+    S+S + E +AI N RVDW+ETPEAHVF
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKEL-TSSSLSRENSAIVNARVDWRETPEAHVF 59

Query: 60  SVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWHRVERSSGKFMRRFRLPENAK 119
             DLPGL          + SVL+ISGER  E+E K+D WHRVERSSG+F RRFRLPEN K
Sbjct: 60  KADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVK 119

Query: 120 MDQVKAAMENGXXXXXXXXXXXXXXXXXSIQISG 153
           MDQVKAAMENG                 SIQISG
Sbjct: 120 MDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score =  171 bits (432), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 99/132 (75%), Gaps = 2/132 (1%)

Query: 1   MSLIPSFFGG-RRSN-VFDPFSQELWDPFEGFPVSNSSACETTAIANTRVDWKETPEAHV 58
           MSLIPSFFG  RRSN +FDPFS ++WDPF+     +S + ET+AI N RVDWKET EAHV
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHV 60

Query: 59  FSVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWHRVERSSGKFMRRFRLPENA 118
           F  DLPG+          D SVL+ISGER  E+E+K D WHRVERSSG+F R+F+LPEN 
Sbjct: 61  FKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENV 120

Query: 119 KMDQVKAAMENG 130
           KMDQVKA+MENG
Sbjct: 121 KMDQVKASMENG 132


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score =  153 bits (387), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 94/135 (69%), Gaps = 10/135 (7%)

Query: 1   MSLIPSFFGGRRSNV---FDPFSQELWDPFE--GFPVSNSSACETTAIANTRVDWKETPE 55
           MSLIPSFFG  R      FDPFS ++WDPF+   FP     +  ++AIAN RVDWKET E
Sbjct: 1   MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFP-----SSSSSAIANARVDWKETAE 55

Query: 56  AHVFSVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWHRVERSSGKFMRRFRLP 115
           AHVF  DLPG+          D SVL+ISGER  E+E+K D WHRVERSSG F R+FRLP
Sbjct: 56  AHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLP 115

Query: 116 ENAKMDQVKAAMENG 130
           EN KMDQVKA+MENG
Sbjct: 116 ENVKMDQVKASMENG 130


>AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones
           superfamily protein | chr4:6370537-6371124 FORWARD
           LENGTH=195
          Length = 195

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 63/91 (69%)

Query: 40  TTAIANTRVDWKETPEAHVFSVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWH 99
           + A++  RVDWKET E H   +D+PGL          +  VL++SGER RE+E+K D+WH
Sbjct: 65  SVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWH 124

Query: 100 RVERSSGKFMRRFRLPENAKMDQVKAAMENG 130
           RVERS GKF R+F+LP+N  M+ VKA +ENG
Sbjct: 125 RVERSYGKFWRQFKLPDNVDMESVKAKLENG 155


>AT5G12020.1 | Symbols: HSP17.6II | 17.6 kDa class II heat shock
           protein | chr5:3882409-3882876 REVERSE LENGTH=155
          Length = 155

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 39  ETTAIANTRVDWKETPEAHVFSVDLPGLXXXXXXXXXXDGSVLQISGERSRE-QEQKDDK 97
           +  A+A T  D  E P A+ F VD+PG+          + +VL +SGER RE +E +  K
Sbjct: 38  DAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVK 97

Query: 98  WHRVERSSGKFMRRFRLPENAKMDQVKAAMENG 130
           + R+ER  GKFMR+F+LPENA +D++ A   +G
Sbjct: 98  YVRMERRMGKFMRKFQLPENADLDKISAVCHDG 130


>AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:14969035-14969448 FORWARD LENGTH=137
          Length = 137

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 5/88 (5%)

Query: 48  VDWKETPEAHVFSVDLPGLXXXXXXXXXXDGSVLQISGERSREQEQKDDKWHRVERSS-- 105
           +DW E+  +H+F +++PG           +G+VL I GE  +E+++++  WH  ER +  
Sbjct: 24  IDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFS 83

Query: 106 ---GKFMRRFRLPENAKMDQVKAAMENG 130
               +F+RR  LPEN K+DQVKA +ENG
Sbjct: 84  GGGSEFLRRIELPENVKVDQVKAYVENG 111


>AT5G12030.1 | Symbols: AT-HSP17.6A, HSP17.6, HSP17.6A | heat shock
           protein 17.6A | chr5:3884214-3884684 REVERSE LENGTH=156
          Length = 156

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 1/93 (1%)

Query: 39  ETTAIANTRVDWKETPEAHVFSVDLPGLXXXXXXXXXXDGSVLQISGERSRE-QEQKDDK 97
           +  A+A T  D  E P+A+VF+VD+PG+          + +VL +SG+R R+ +E +  K
Sbjct: 39  DAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVK 98

Query: 98  WHRVERSSGKFMRRFRLPENAKMDQVKAAMENG 130
           + R+ER  GKFMR+F+LP+NA ++++ AA  +G
Sbjct: 99  FVRMERRMGKFMRKFQLPDNADLEKISAACNDG 131


>AT2G19310.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr2:8369892-8370380 REVERSE LENGTH=162
          Length = 162

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 24/102 (23%)

Query: 28  EGFPVSNSSACETTAIANTRVDWKETPEAHVFSVDLPGLXXXXXXXXXXDGSVLQISGER 87
           E FP ++SS        NT+++W ETP AHVF   LPG+          +   LQI    
Sbjct: 48  EIFPQTSSSTV------NTQLNWTETPTAHVFKAYLPGVDQDEVIAFVDEEGYLQICT-- 99

Query: 88  SREQEQKDDKWHRVERSSGKFMRRFRLPENAKMDQVKAAMEN 129
                              KFM RF+LP NA  DQV A ME+
Sbjct: 100 ----------------GDNKFMSRFKLPNNALTDQVTAWMED 125


>AT1G54050.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:20179558-20180122 REVERSE LENGTH=155
          Length = 155

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 45  NTRVDWKETPEAHVFSVDLPGLXXXXXXXXXXDGSVLQI--SGERSREQEQKDD--KWHR 100
           N  +D  E+P+ ++F +D+PG+          +   L I  +G+R R+ ++ ++  K+ R
Sbjct: 41  NIPIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIR 100

Query: 101 VERSSGK-FMRRFRLPENAKMDQVKAAMENG 130
           +ER   +  +++FRLPE+A M  V A  + G
Sbjct: 101 LERRLAQNLVKKFRLPEDADMASVTAKYQEG 131