Miyakogusa Predicted Gene

Lj1g3v0178890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0178890.1 Non Chatacterized Hit- tr|A3CEP3|A3CEP3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,69.23,0.0000000000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Starch-binding
domain-like,Carbohydrate-binding-lik,CUFF.25336.1
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09890.1 | Symbols:  | Rhamnogalacturonate lyase family prote...   271   2e-73
AT4G24430.1 | Symbols:  | Rhamnogalacturonate lyase family prote...   267   5e-72
AT1G09910.1 | Symbols:  | Rhamnogalacturonate lyase family prote...   260   4e-70
AT1G09880.1 | Symbols:  | Rhamnogalacturonate lyase family prote...   258   2e-69
AT2G22620.1 | Symbols:  | Rhamnogalacturonate lyase family prote...   227   4e-60
AT2G22620.2 | Symbols:  | Rhamnogalacturonate lyase family prote...   226   6e-60
AT4G38030.1 | Symbols:  | Rhamnogalacturonate lyase family prote...   226   1e-59
AT4G37950.1 | Symbols:  | Rhamnogalacturonate lyase family prote...   220   6e-58

>AT1G09890.1 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr1:3214237-3217386 REVERSE LENGTH=617
          Length = 617

 Score =  271 bits (694), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 161/204 (78%), Gaps = 1/204 (0%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +GFW+I PS+E+R+GG  KQNLTSHVGP +L++F+SAHY GED+V K    EAWKKVFGP
Sbjct: 210 VGFWLITPSHEYRTGGPQKQNLTSHVGPTALAVFISAHYTGEDLVPKFSEGEAWKKVFGP 269

Query: 61  AFVYLNTLLDGE-DPLKLCEDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVRD 119
            FVYLN+  D + DPL L +DAK QMN EA+SWPY FPAS+D+ K+ QRG+V G LLV+D
Sbjct: 270 VFVYLNSSTDDDNDPLWLWQDAKSQMNVEAESWPYSFPASDDYVKTEQRGNVVGRLLVQD 329

Query: 120 RYLGDESILAQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYAW 179
           RY+  + I A   Y+GLA PG AGSWQRECK YQFW+RT++EG+F I+ IR G YNLYAW
Sbjct: 330 RYVDKDFIAANRGYVGLAVPGAAGSWQRECKEYQFWTRTDEEGFFYISGIRPGQYNLYAW 389

Query: 180 VPGFIGEYWNNVVLTITPGCFTFI 203
           +PGFIG+Y  + V+TIT GC+ ++
Sbjct: 390 IPGFIGDYKYDDVITITSGCYIYV 413


>AT4G24430.1 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr4:12630018-12632975 FORWARD LENGTH=646
          Length = 646

 Score =  267 bits (682), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 127/200 (63%), Positives = 156/200 (78%), Gaps = 1/200 (0%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +G W IIPSNEFRSGGL KQNLTSHVGPISL+MFLSAHYAGED+V+K++  ++WKKVFGP
Sbjct: 229 LGCWQIIPSNEFRSGGLSKQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGP 288

Query: 61  AFVYLNTLLDG-EDPLKLCEDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVRD 119
            F YLN L D   DPL L +DAK+QM  E QSWPYDFPASEDF  S +RG + G LLV D
Sbjct: 289 VFTYLNCLPDKTSDPLSLWQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCD 348

Query: 120 RYLGDESILAQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYAW 179
           ++L D+ + A GA++GLAPPGE GSWQ E KGYQFW+  + +GYF+IN+IR G+YNL  +
Sbjct: 349 KFLSDDFLPANGAFVGLAPPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNGY 408

Query: 180 VPGFIGEYWNNVVLTITPGC 199
           V G+IG+Y    ++ IT GC
Sbjct: 409 VTGWIGDYQYEQLINITAGC 428


>AT1G09910.1 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr1:3220151-3224451 REVERSE LENGTH=675
          Length = 675

 Score =  260 bits (665), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 115/200 (57%), Positives = 155/200 (77%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +GFW I PSNEFRSGG +KQNLTSHVGP +L++F S HYAG+ ++ + +  E WKKV+GP
Sbjct: 268 VGFWQITPSNEFRSGGPLKQNLTSHVGPTTLAVFHSTHYAGKTMMPRFEHGEPWKKVYGP 327

Query: 61  AFVYLNTLLDGEDPLKLCEDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVRDR 120
            F+YLN+  +G+DPL L +DAK +M  E + WPY F AS+D+ KS +RG+  G LL+RDR
Sbjct: 328 VFIYLNSTANGDDPLCLWDDAKIKMMAEVERWPYSFVASDDYPKSEERGTARGRLLIRDR 387

Query: 121 YLGDESILAQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYAWV 180
           ++ ++ I A+GAY+GLAPPG++GSWQ ECKGYQFW+  ++ GYFSI N+R G+YNLYAWV
Sbjct: 388 FINNDLISARGAYVGLAPPGDSGSWQIECKGYQFWAIADEAGYFSIGNVRPGEYNLYAWV 447

Query: 181 PGFIGEYWNNVVLTITPGCF 200
           P FIG+Y N  ++ +T GC 
Sbjct: 448 PSFIGDYHNGTIVRVTSGCM 467


>AT1G09880.1 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr1:3208828-3211653 REVERSE LENGTH=631
          Length = 631

 Score =  258 bits (659), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 119/199 (59%), Positives = 148/199 (74%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +GFW I PSNEFRS G +KQ L SHVGP +L++F S HY G D+++  +  EAWKKVFGP
Sbjct: 214 VGFWQITPSNEFRSAGPLKQFLGSHVGPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGP 273

Query: 61  AFVYLNTLLDGEDPLKLCEDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVRDR 120
            F+YLN+   G DPL L  +AK+Q   E + WPY+F AS+DF  S QRGSV G LLVRDR
Sbjct: 274 VFIYLNSFPKGVDPLLLWHEAKNQTKIEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDR 333

Query: 121 YLGDESILAQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYAWV 180
           ++  E I A G+Y+GLA PG+ GSWQRECKGYQFWS+ ++ G FSINN+RSG YNLYA+ 
Sbjct: 334 FISSEDIPANGSYVGLAAPGDVGSWQRECKGYQFWSKADENGSFSINNVRSGRYNLYAFA 393

Query: 181 PGFIGEYWNNVVLTITPGC 199
           PGFIG+Y N+ V  I+PG 
Sbjct: 394 PGFIGDYHNDTVFDISPGS 412


>AT2G22620.1 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr2:9604902-9610156 REVERSE LENGTH=677
          Length = 677

 Score =  227 bits (578), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 105/199 (52%), Positives = 140/199 (70%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +GFW+I PS+EFR GG +KQ+LTSH GPI+LSMF S HYAG+++ +  +  E WKKVFGP
Sbjct: 268 VGFWMITPSDEFRLGGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGP 327

Query: 61  AFVYLNTLLDGEDPLKLCEDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVRDR 120
              YLN++   +  L+L  DAK QM  E +SWPYDF  SED+    QRG++ G  L++D 
Sbjct: 328 VLAYLNSVSPKDSTLRLWRDAKRQMAAEVKSWPYDFITSEDYPLRHQRGTLEGQFLIKDS 387

Query: 121 YLGDESILAQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYAWV 180
           Y+    I  + A++GLAP GEAGSWQ E KGYQFW++ ++ G F I N+R+G+Y+LYAW 
Sbjct: 388 YVSRLKIYGKFAFVGLAPIGEAGSWQTESKGYQFWTKADRRGRFIIENVRAGNYSLYAWG 447

Query: 181 PGFIGEYWNNVVLTITPGC 199
            GFIG+Y     +TITPG 
Sbjct: 448 SGFIGDYKYEQNITITPGS 466


>AT2G22620.2 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr2:9604902-9610156 REVERSE LENGTH=597
          Length = 597

 Score =  226 bits (577), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 105/199 (52%), Positives = 140/199 (70%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +GFW+I PS+EFR GG +KQ+LTSH GPI+LSMF S HYAG+++ +  +  E WKKVFGP
Sbjct: 188 VGFWMITPSDEFRLGGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGP 247

Query: 61  AFVYLNTLLDGEDPLKLCEDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVRDR 120
              YLN++   +  L+L  DAK QM  E +SWPYDF  SED+    QRG++ G  L++D 
Sbjct: 248 VLAYLNSVSPKDSTLRLWRDAKRQMAAEVKSWPYDFITSEDYPLRHQRGTLEGQFLIKDS 307

Query: 121 YLGDESILAQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYAWV 180
           Y+    I  + A++GLAP GEAGSWQ E KGYQFW++ ++ G F I N+R+G+Y+LYAW 
Sbjct: 308 YVSRLKIYGKFAFVGLAPIGEAGSWQTESKGYQFWTKADRRGRFIIENVRAGNYSLYAWG 367

Query: 181 PGFIGEYWNNVVLTITPGC 199
            GFIG+Y     +TITPG 
Sbjct: 368 SGFIGDYKYEQNITITPGS 386


>AT4G38030.1 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr4:17863206-17866730 REVERSE LENGTH=667
          Length = 667

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 108/201 (53%), Positives = 137/201 (68%), Gaps = 6/201 (2%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +GFW+I PS E+RSGG +KQ LTSHVGP +++ F+S HY G D+    +P EAWKKV GP
Sbjct: 261 VGFWIISPSGEYRSGGPIKQELTSHVGPTAITTFISGHYVGADMEAHYRPGEAWKKVLGP 320

Query: 61  AFVYLNT-LLDGEDPLKLC-EDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVR 118
            F+YLN+       P  L  EDAK Q  KE ++WPYDF AS D+    +RGSV G LLV 
Sbjct: 321 VFIYLNSDSTSNNKPQDLLWEDAKQQSEKEVKAWPYDFVASSDYLSRRERGSVTGRLLVN 380

Query: 119 DRYLGDESILAQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYA 178
           DR+L       + AY+GLAPPGEAGSWQ   KGYQFW++TN+ GYF+I N+R G YNLY 
Sbjct: 381 DRFLTP----GKSAYVGLAPPGEAGSWQTNTKGYQFWTKTNETGYFTIENVRPGTYNLYG 436

Query: 179 WVPGFIGEYWNNVVLTITPGC 199
           WVPGFIG++    ++ +  G 
Sbjct: 437 WVPGFIGDFRYQNLVNVAAGS 457


>AT4G37950.1 | Symbols:  | Rhamnogalacturonate lyase family protein
           | chr4:17844792-17849156 FORWARD LENGTH=678
          Length = 678

 Score =  220 bits (560), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 112/199 (56%), Positives = 137/199 (68%), Gaps = 4/199 (2%)

Query: 1   MGFWVIIPSNEFRSGGLVKQNLTSHVGPISLSMFLSAHYAGEDIVLKLQPNEAWKKVFGP 60
           +GFW+I PS+EF + G +KQ+LTSHVGP +LSMF S HYAG+D+    +  E WKKVFGP
Sbjct: 269 IGFWMITPSDEFHACGPIKQDLTSHVGPTTLSMFTSVHYAGKDMNTNYKSKEPWKKVFGP 328

Query: 61  AFVYLNTLLDGEDPLKLCEDAKDQMNKEAQSWPYDFPASEDFQKSSQRGSVYGTLLVRDR 120
            FVYLN+         L  DAK QM  E QSWPYDF  S D+    QRG+V G L V DR
Sbjct: 329 VFVYLNS---ASSRNLLWTDAKRQMVSEVQSWPYDFVKSVDYPLHHQRGTVKGQLFVIDR 385

Query: 121 YLGDESIL-AQGAYIGLAPPGEAGSWQRECKGYQFWSRTNKEGYFSINNIRSGDYNLYAW 179
           Y+ + + L  Q A++GLA PGEAGSWQ E KGYQFW+R +K G F+I N+R G Y+LYAW
Sbjct: 386 YIKNVTYLFGQFAFVGLALPGEAGSWQTENKGYQFWTRADKMGMFTIANVRPGTYSLYAW 445

Query: 180 VPGFIGEYWNNVVLTITPG 198
           V GFIG+Y     +TITPG
Sbjct: 446 VSGFIGDYKYVRDITITPG 464