Miyakogusa Predicted Gene
- Lj1g3v0173670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0173670.1 tr|Q2R497|Q2R497_ORYSJ Os11g0482400 protein
OS=Oryza sativa subsp. japonica GN=Os11g0482400 PE=4
SV=,30.29,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PENTATRICOPEPTIDE (PPR) REPEAT-CONTAIN,CUFF.25310.1
(440 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 202 3e-52
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 193 2e-49
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 189 2e-48
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 189 3e-48
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 187 1e-47
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 7e-47
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 181 9e-46
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 8e-45
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 7e-44
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 174 1e-43
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 166 4e-41
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 7e-41
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 164 9e-41
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 2e-40
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 162 3e-40
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 8e-40
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 3e-39
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 8e-39
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 157 1e-38
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 157 1e-38
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 157 1e-38
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 156 3e-38
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 6e-38
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 8e-38
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 3e-37
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 5e-37
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 7e-37
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 8e-37
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 149 5e-36
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 7e-36
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 8e-36
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 148 8e-36
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 8e-36
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 3e-35
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 145 5e-35
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 143 2e-34
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 7e-34
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 139 4e-33
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 7e-33
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 8e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 8e-33
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 137 1e-32
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 137 2e-32
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 136 3e-32
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 4e-32
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 4e-32
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 132 3e-31
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 132 4e-31
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 130 2e-30
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 9e-29
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 120 2e-27
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 120 2e-27
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 120 2e-27
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 119 4e-27
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 119 4e-27
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 117 1e-26
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 3e-26
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 8e-25
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 105 5e-23
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 100 3e-21
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 2e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 68 1e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 65 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 2e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 64 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 63 4e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 2e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 60 3e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 4e-09
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 4e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 57 2e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 56 4e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 7e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 8e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 2e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 50 2e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 49 7e-06
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 49 9e-06
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 210/417 (50%), Gaps = 23/417 (5%)
Query: 28 PIDKGQNI---SLQKSHKFNTHLDPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDK 84
PID N+ ++ K + LD + Q + + + E V +F LL+ C D+
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLD----KALQFFVRMRYDDVEPVVYNFTY-LLKVCGDE 148
Query: 85 RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLM 144
+ +HG ++K+G D KC + +AR+ FD MP R++V+W T++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 145 LGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHID 204
GY QN + A + M PS T+ L A ++L+ + G+++H Y ++ D
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 205 FDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM 264
++ AL +Y+KCG LE A + F + E+NV+SW + I + + K+ + IF +M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 265 LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
L E ++P + ++ L C ++ LE G +H + +LG + N+ V NSL+ +Y K +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 325 GEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMK 382
A +F + +LV+WNAMI G A+ NG +ALN FS++ +K
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQ-------------NGRPIDALNYFSQMRSRTVK 435
Query: 383 LDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
D FT+ SV++ + + IH +++ +V V T+L++MY KC +++ A
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 170/341 (49%), Gaps = 14/341 (4%)
Query: 58 ALSLAKEGTEE-VDSSFY--IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
AL + K EE + SF + +L R S + +HG+ M++G
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
KCG++E AR+ FD M RNVV+W +++ YVQN PK A +F +ML G P+ +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
+ AL+AC L L+ G +H ++ +D + SV N+L S+Y KC ++ A F +++
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+ ++SW A I +G+ L F +M S ++P+ +T SV++ E+
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
+H + + + N+ V +L+ +Y K G I A+++F M + + TWNAMI G+
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH-- 517
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
G AL LF ++ +K + TF SV+S C
Sbjct: 518 ---------GFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 184/392 (46%), Gaps = 17/392 (4%)
Query: 49 PSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXX 108
PSR+R F + E ++ LL++C S + + + + K G +++
Sbjct: 18 PSRHRHFLSERNYIPANVYEHPAAL---LLERC---SSLKELRQILPLVFKNGLYQEHFF 71
Query: 109 XXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS 168
+ G++++A R F+ + + V + T++ G+ + S A F M +
Sbjct: 72 QTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV 131
Query: 169 YPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALK 228
P + L C L+ G+++H ++K D L ++Y+KC ++ A K
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARK 191
Query: 229 AFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF 288
F R+ E++++SW ++ +G A+ L + M EN++P+ T+ SVL ++
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
+ +G ++H + G++S + + +L+ +Y K G + A+ LF GM + ++V+WN+MI
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
+ + N EA+ +F K+ G+K + L C + +G IH
Sbjct: 312 YVQNE-----------NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 409 AQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
+++ G +V V SLI+MY KC V A+
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 4/244 (1%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
FQ+ L EG + D S + L C D + +H ++ G +
Sbjct: 325 FQKMLD---EGVKPTDVSV-MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
KC ++ A F + R +V+W ++LG+ QN RP A + F +M P T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
+ A L + +H +++ +D + V AL +Y+KCG + A F +
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
E++V +W A I G G K L +F EM ++PN T SV+S C +E G +
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 295 VHSM 298
M
Sbjct: 561 CFYM 564
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 177/318 (55%), Gaps = 13/318 (4%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G +E+AR FD MP R+VVAWT ++ GY ++ A+ F EM+ G+ P+ TL+ L
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVL 118
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG-RLEFALKAFKRIKEKNV 238
+C ++K L G +H ++K ++ V NA+ ++Y+ C +E A F+ IK KN
Sbjct: 119 KSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKND 178
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
++WT I+ G GL+++ +ML EN + Y +T + I + G Q+H+
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHAS 238
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
K G++SNL V NS+L LY + G + EA+ F M+D L+TWN +I+ +E+S
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE----LERS-- 292
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
+ +EAL +F + G + +TF+S+++ C + A G+Q+H + + GF
Sbjct: 293 ------DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 419 DVIVGTSLINMYIKCASV 436
+V + +LI+MY KC ++
Sbjct: 347 NVELANALIDMYAKCGNI 364
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 15/337 (4%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
+ K+GT + + +L+ C + + + +VHG ++K G C
Sbjct: 102 MVKQGTSPNEFTLS-SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 121 -NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
ME A F + +N V WTTL+ G+ ++ +ML + + + IA+
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
A S+ S+ +G+Q+HA +IK + V N++ LY +CG L A F +++K++I
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
+W IS + + + L +F S+ PN YT TS+++ C I L G Q+H
Sbjct: 281 TWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILF-KGMDDASLVTWNAMIAGHAKMMEQSRD 358
+ G+ N+ + N+L+ +Y K G I ++Q +F + +D +LV+W +M+ G+
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG-------- 391
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+ G EA+ LF K+ SG++ D F +VLS C
Sbjct: 392 ---SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC 425
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 13/225 (5%)
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
N + S + K G +E A F + +++V++WTA I+ S + F EM+ +
Sbjct: 50 NLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ-I 329
PNE+TL+SVL C ++ L G VH + KLG E +L V N+++ +Y EA +
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 330 LFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFS 389
+F+ + + VTW +I G + + G L ++ ++ ++ + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGD-----------GIGGLKMYKQMLLENAEVTPYCIT 217
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ + + G+QIHA IK GF S++ V S++++Y +C
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG 262
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 3/178 (1%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM- 132
+ L+ C + + + Q +HG I + G +++ KCGN+ D++R F +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 133 PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG- 191
RRN+V+WT++M+GY + A +FD+M+ +G P L+AC ++ G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSC 248
+ + +Y I+ D + N + L + G++ A + +R+ K + +W A + +C
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 177/318 (55%), Gaps = 13/318 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLA 176
+ G++ AR+ FD MP +N V WT ++ GY++ AF +F++ + G + +
Sbjct: 129 RLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFV 188
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
LN C+ + G Q+H ++K + + V ++L Y++CG L AL+AF ++EK
Sbjct: 189 CLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEK 247
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+VISWTA IS+C G K + +F+ ML+ PNE+T+ S+L C E + L G QVH
Sbjct: 248 DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVH 307
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
S+ K ++++ V SL+ +Y K G I + + +F GM + + VTW ++IA HA
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA------ 361
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
R+ G EA++LF + + + T S+L CG + A + G+++HAQ IK
Sbjct: 362 REGF-----GEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 417 LSDVIVGTSLINMYIKCA 434
+V +G++L+ +Y KC
Sbjct: 417 EKNVYIGSTLVWLYCKCG 434
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 192/385 (49%), Gaps = 16/385 (4%)
Query: 56 QEALSL----AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
EA +L K G + ++ LL C + F + VHG+++K G +
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESS 223
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS 171
+CG + A RAFD M ++V++WT ++ + A +F ML+ P+
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK 231
T+ L AC+ K+L+ G Q+H+ ++K I D VG +L +Y+KCG + K F
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD 343
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ +N ++WT+ I++ G ++ + +F M ++ N T+ S+L C + L L
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G ++H+ K E N+ + ++L++LY K G +A + + + +V+W AMI+G +
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
+ +S EAL+ ++ G++ + FT+SS L C + + G IH+
Sbjct: 464 LGHES-----------EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 412 IKTGFLSDVIVGTSLINMYIKCASV 436
K LS+V VG++LI+MY KC V
Sbjct: 513 KKNHALSNVFVGSALIHMYAKCGFV 537
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 165/322 (51%), Gaps = 15/322 (4%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L+ C ++++ + VH ++K D KCG + D R+ FD M RN
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V WT+++ + + + A +F M + T+ L AC S+ +L G++LHA
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
IIK I+ + +G+ L LY KCG A +++ ++V+SWTA IS C G +
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESE 469
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
L EM+ E ++PN +T +S L C + L +G +HS+ K SN+ V ++L++
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFS 374
+Y K G + EA +F M + +LV+W AMI G+A+ NG EAL L
Sbjct: 530 MYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYAR-------------NGFCREALKLMY 576
Query: 375 KLNCSGMKLDLFTFSSVLSVCG 396
++ G ++D + F+++LS CG
Sbjct: 577 RMEAEGFEVDDYIFATILSTCG 598
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
+ +L+ C + + +H I+K ++ KCG DA +P
Sbjct: 389 VSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS 448
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
R+VV+WT ++ G A EM+ G P+ T + AL AC + +SL G +
Sbjct: 449 RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI 508
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H+ K H + VG+AL +Y+KCG + A + F + EKN++SW A I +G
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
++ L++ M +E + ++Y ++LS C +I+ E
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 13/246 (5%)
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+++HA +K D GN L S + G L +A K F + EKN ++WTA I
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 252 GKAKKGLRIFVEMLSENMQ-PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
G + +F + + ++ NE +L+ C ELG QVH K+G NL V
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIV 220
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
+SL+Y Y + G + A F M++ +++W A+I+ ++ +G +A+
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK-----------GHGIKAI 269
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
+F + + FT S+L C A G Q+H+ +K +DV VGTSL++MY
Sbjct: 270 GMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY 329
Query: 431 IKCASV 436
KC +
Sbjct: 330 AKCGEI 335
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
+ L ++H+M K + + N+L+ ++ G + A+ +F M + + VTW AMI G
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDG 157
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKL-DLFTFSSVLSVCGRMVAFVQGEQI 407
+ K + EA LF G++ + F +L++C R F G Q+
Sbjct: 158 YLKYGLED-----------EAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQV 206
Query: 408 HAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
H +K G + ++IV +SL+ Y +C + A
Sbjct: 207 HGNMVKVG-VGNLIVESSLVYFYAQCGELTSA 237
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 197/373 (52%), Gaps = 16/373 (4%)
Query: 64 EGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKT-GNHEDXXXXXXXXXXXXKCGNM 122
E V++ Y+ L+ C +R+ S + +H I KT + E KCG++
Sbjct: 75 ENNSPVEAFAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSL 132
Query: 123 EDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNAC 182
+DA + FD MP R AW T++ YV N P A ++ M G +++ L AC
Sbjct: 133 DDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 192
Query: 183 TSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVISW 241
L+ ++SG +LH+ ++K + NAL S+Y+K L A + F +EK + + W
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 252
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ +SS SGK+ + L +F EM PN YT+ S L+ C + +LG ++H+ K
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 302 LG-YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
+ S L V N+L+ +Y + G + +A+ + + M++A +VTWN++I G+ + + +
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL------M 366
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
Y EAL FS + +G K D + +S+++ GR+ + G ++HA IK G+ S++
Sbjct: 367 Y-----KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 421 IVGTSLINMYIKC 433
VG +LI+MY KC
Sbjct: 422 QVGNTLIDMYSKC 434
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 13/348 (3%)
Query: 93 VHGHIMKTGNHE-DXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
+H ++K+ H + +CG M A R M +VV W +L+ GYVQN
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
K A F +M+ G ++ + A L +L +G +LHAY+IK+ D + VGN
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
L +YSKC + +AF R+ +K++ISWT I+ + + L +F ++ + M+
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+E L S+L ++ + + ++H + G + ++N L+ +Y K +G A +F
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVF 544
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
+ + +V+W +MI+ A N +EA+ LF ++ +G+ D +
Sbjct: 545 ESIKGKDVVSWTSMISSSA-----------LNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
LS + A +G +IH ++ GF + + ++++MY C + A
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +++K G + KC RAF M +++++WTT++ GY QN
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A +F ++ L L A + LKS+ +++H +I++ + DT + N
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNE 526
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L +Y KC + +A + F+ IK K+V+SWT+ ISS +G + + +F M+ + +
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
L +LS + L G ++H + G+ + +++ +Y G + A+ +F
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFD 646
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
++ L+ + +MI + ++ C G A+ LF K+ + D +F ++L
Sbjct: 647 RIERKGLLQYTSMINAYG---------MHGC--GKAAVELFDKMRHENVSPDHISFLALL 695
Query: 393 SVC 395
C
Sbjct: 696 YAC 698
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 57 EALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXX 113
EAL L ++ + E+D +L+ +S + +H HI++ G D
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG-LLDTVIQNELV 528
Query: 114 XXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
KC NM A R F+ + ++VV+WT+++ N A +F M+ TG
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
L L+A SL +L G ++H Y+++ + S+ A+ +Y+ CG L+ A F RI
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 648
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+ K ++ +T+ I++ G G K + +F +M EN+ P+ + ++L C L+ G
Sbjct: 649 ERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 188/366 (51%), Gaps = 15/366 (4%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
+ +L+ C K VH +++K+G+ + KC A + FD MP
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
RNVV+W+ LM G+V N K + +F EM G YP+ T + L AC L +L+ G Q+
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H + +K + VGN+L +YSKCGR+ A K F+RI ++++ISW A I+ +G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 255 KKGLRIFVEMLSENMQ--PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE--SNLRV 310
K L F M N++ P+E+TLTS+L C + G Q+H + G+ S+ +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
SL+ LY+K G + A+ F + + ++++W+++I G+A+ E EA+
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF-----------VEAM 298
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
LF +L ++D F SS++ V QG+Q+ A +K + V S+++MY
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 431 IKCASV 436
+KC V
Sbjct: 359 LKCGLV 364
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 142/271 (52%), Gaps = 15/271 (5%)
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
L L CT G Q+H Y++K + N L +Y KC A K F
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+ E+NV+SW+A +S +G K L +F EM + + PNE+T ++ L C + LE G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM 352
Q+H C K+G+E + V NSL+ +Y K G I EA+ +F+ + D SL++WNAMIAG
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF--- 183
Query: 353 MEQSRDNLYACWNGTEALNLFSKLNCSGMK--LDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
++A + G++AL+ F + + +K D FT +S+L C G+QIH
Sbjct: 184 -------VHAGY-GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 411 TIKTGF--LSDVIVGTSLINMYIKCASVVCA 439
+++GF S + SL+++Y+KC + A
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 153/326 (46%), Gaps = 15/326 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG +K G KCG + +A + F + R++++W ++ G+V
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 153 PKHAFHVFDEMLHTG--SYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK--YHIDFDTS 208
A F M P TL L AC+S + +G+Q+H ++++ +H +
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
+ +L LY KCG L A KAF +IKEK +ISW++ I G+ + + +F + N
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
Q + + L+S++ + L G Q+ ++ KL V NS++ +YLK G + EA+
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
F M +++W +I G+ K G +++ +F ++ ++ D +
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKH-----------GLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKT 414
+VLS C +GE++ ++ ++T
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLET 443
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 67 EEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNH--EDXXXXXXXXXXXXKCGNMED 124
E D LL+ C + +HG ++++G H KCG +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
AR+AFD + + +++W++L+LGY Q A +F + S L+ +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
L+ G+Q+ A +K +TSV N++ +Y KCG ++ A K F ++ K+VISWT
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
I+ G G KK +RIF EML N++P+E +VLS C ++ G ++ S
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG +++A + F M ++V++WT ++ GY ++ K + +F EML P
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC--SLYSKCGRLEFALKAFKRIKE 235
L+AC+ +K GE+L + +++ H V + C L + GRL+ A +
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETH-GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 236 K-NVISWTAAISSC---GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVL 280
K NV W +S C GD K+ +I + + ++N P Y + S L
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN--PANYVMMSNL 525
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 191/389 (49%), Gaps = 13/389 (3%)
Query: 52 YRGFQEALSLAKEGTE-EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
YR EA A++ + ++ YI L+ C RS + + +H HI+ + D
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
KCG++ DAR FD MP RN+V++T+++ GY QN + A ++ +ML P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
+ AC S + G+QLHA +IK NAL ++Y + ++ A + F
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM-QPNEYTLTSVLSQCCEIQFL 289
I K++ISW++ I+ G + L EMLS + PNEY S L C +
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
+ G+Q+H +C K N SL +Y + G + A+ +F ++ +WN +IAG
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 350 AKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
A +N YA EA+++FS++ SG D + S+L + +A QG QIH+
Sbjct: 347 A-------NNGYA----DEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 410 QTIKTGFLSDVIVGTSLINMYIKCASVVC 438
IK GFL+D+ V SL+ MY C+ + C
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYC 424
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 155/298 (52%), Gaps = 13/298 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+CG + ARR FD + R + +W ++ G N A VF +M +G P +L
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK- 236
L A T +L G Q+H+YIIK+ D +V N+L ++Y+ C L F+ +
Sbjct: 377 LLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 436
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+ +SW +++C + + LR+F ML +P+ T+ ++L C EI L+LG+QVH
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
K G ++N L+ +Y K G +G+A+ +F MD+ +V+W+ +I G+A+
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQ----- 551
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
G EAL LF ++ +G++ + TF VL+ C + +G +++A T++T
Sbjct: 552 ------SGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQT 602
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 13/362 (3%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+++ C + +H ++K + + M DA R F +P ++
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSLKSGEQLH 195
+++W++++ G+ Q A EML G + P+ +L AC+SL G Q+H
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
IK + + G +LC +Y++CG L A + F +I+ + SW I+ ++G A
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
+ + +F +M S P+ +L S+L + L G Q+HS K G+ ++L V NSLL
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 316 YLYLKRGCIGEAQILFKGM-DDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFS 374
+Y + LF+ ++A V+WN ++ + EQ E L LF
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH-EQP----------VEMLRLFK 462
Query: 375 KLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ S + D T ++L C + + G Q+H ++KTG + + LI+MY KC
Sbjct: 463 LMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 435 SV 436
S+
Sbjct: 523 SL 524
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 8/276 (2%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF-DHMPRRNVVAWTTLMLGYVQNS 151
+H +I+K G D C ++ F D + V+W T++ +Q+
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
+P +F ML + P T+ L C + SLK G Q+H Y +K + + + N
Sbjct: 453 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKN 512
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
L +Y+KCG L A + F + ++V+SW+ I SG ++ L +F EM S ++P
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVH-SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
N T VL+ C + +E G +++ +M T+ G + ++ L + G + EA+
Sbjct: 573 NHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERF 632
Query: 331 FKGMD-DASLVTWNAMIA-----GHAKMMEQSRDNL 360
M + +V W +++ G+ + +++ +N+
Sbjct: 633 IDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENI 668
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 179/371 (48%), Gaps = 11/371 (2%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D+S +L+ C + + + +H + +KT + G ++ + R F
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
MP RN V WT ++ G V R K F EM + T AIAL AC L+ +K
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G+ +H ++I V N+L ++Y++CG ++ L F+ + E++V+SWT+ I +
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
G+ K + F++M + + PNE T S+ S C + L G Q+H LG +L
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
V NS++ +Y G + A +LF+GM +++W+ +I G+ + G E
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ-----------AGFGEEG 395
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
FS + SG K F +S+LSV G M G Q+HA + G + V +SLINM
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 430 YIKCASVVCAS 440
Y KC S+ AS
Sbjct: 456 YSKCGSIKEAS 466
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 171/344 (49%), Gaps = 14/344 (4%)
Query: 55 FQEALSLAKE--GTEEVDSSFYIPL-LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
++E L+ E +EE+ ++ + L+ C R + +H H++ G
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANS 249
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS 171
+CG M+D F++M R+VV+WT+L++ Y + + A F +M ++ P+
Sbjct: 250 LATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPN 309
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK 231
T A +AC SL L GEQLH ++ ++ SV N++ +YS CG L A F+
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
++ +++ISW+ I +G ++G + F M +P ++ L S+LS + +E
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G QVH++ G E N VR+SL+ +Y K G I EA ++F D +V+ AMI G+A+
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAE 489
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+ EA++LF K G + D TF SVL+ C
Sbjct: 490 HGKSK-----------EAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 163/323 (50%), Gaps = 13/323 (4%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM--LHTGSYPSMNTLAI 177
GN+ AR+ FD MP ++V+WT+++ YV + A +F M + P + L++
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L AC ++ GE LHAY +K + VG++L +Y + G+++ + + F + +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
++WTA I+ +G+ K+GL F EM + YT L C ++ ++ G +H+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
G+ + L V NSL +Y + G + + LF+ M + +V+W ++I + ++ ++
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE-- 291
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
+A+ F K+ S + + TF+S+ S C + V GEQ+H + G
Sbjct: 292 ---------VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 418 SDVIVGTSLINMYIKCASVVCAS 440
+ V S++ MY C ++V AS
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSAS 365
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 106/206 (51%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +++ G ++ CGN+ A F M R++++W+T++ GY Q
Sbjct: 332 LHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGF 391
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ F F M +G+ P+ LA L+ ++ ++ G Q+HA + + ++ +++V ++
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSS 451
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L ++YSKCG ++ A F +++S TA I+ + GK+K+ + +F + L +P+
Sbjct: 452 LINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSM 298
T SVL+ C L+LG +M
Sbjct: 512 SVTFISVLTACTHSGQLDLGFHYFNM 537
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 188/369 (50%), Gaps = 14/369 (3%)
Query: 67 EEVDSSFYIPLLQQC--IDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED 124
E + SSF +Q C +D R + ++K+G D K GN++
Sbjct: 146 EYILSSF----IQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDY 201
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
AR FD +P ++ V WTT++ G V+ R + +F +++ P L+ L+AC+
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSI 261
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
L L+ G+Q+HA+I++Y ++ D S+ N L Y KCGR+ A K F + KN+ISWT
Sbjct: 262 LPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
+S + K+ + +F M ++P+ Y +S+L+ C + L GTQVH+ K
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
++ V NSL+ +Y K C+ +A+ +F A +V +NAMI G++++ Q W
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ--------W 433
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
EALN+F + ++ L TF S+L + + +QIH K G D+ G+
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 425 SLINMYIKC 433
+LI++Y C
Sbjct: 494 ALIDVYSNC 502
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 181/345 (52%), Gaps = 14/345 (4%)
Query: 92 IVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
+VHG I+ G D + G M AR+ F+ MP RN+V+W+T++ +
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 152 RPKHAFHVFDEMLHT-GSYPSMNTLAIALNACTSLKSLKSGE--QLHAYIIKYHIDFDTS 208
+ + VF E T P+ L+ + AC+ L QL ++++K D D
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
VG L Y K G +++A F + EK+ ++WT IS C G++ L++F +++ +N
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
+ P+ Y L++VLS C + FLE G Q+H+ + G E + + N L+ Y+K G + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
LF GM + ++++W +++G+ ++ L+ EA+ LF+ ++ G+K D++
Sbjct: 305 KLFNGMPNKNIISWTTLLSGY------KQNALH-----KEAMELFTSMSKFGLKPDMYAC 353
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
SS+L+ C + A G Q+HA TIK +D V SLI+MY KC
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 14/346 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H HI++ G D KCG + A + F+ MP +N+++WTTL+ GY QN+
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNAL 330
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
K A +F M G P M + L +C SL +L G Q+HAY IK ++ D+ V N+
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI---SSCGDSGKAKKGLRIFVEMLSENM 269
L +Y+KC L A K F +V+ + A I S G + + L IF +M +
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
+P+ T S+L + L L Q+H + K G ++ ++L+ +Y C+ ++++
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 330 LFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFS 389
+F M LV WN+M AG+ + E EALNLF +L S + D FTF+
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENE-----------EALNLFLELQLSRERPDEFTFA 559
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
++++ G + + G++ H Q +K G + + +L++MY KC S
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 1/279 (0%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
++ LL+ S ++ +HG + K G + D C ++D+R FD M
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+++V W ++ GYVQ S + A ++F E+ + P T A + A +L S++ G++
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
H ++K ++ + + NAL +Y+KCG E A KAF ++V+ W + ISS + G+
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
KK L++ +M+SE ++PN T VLS C +E G + + + G E
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC 696
Query: 314 LLYLYLKRGCIGEAQILFKGM-DDASLVTWNAMIAGHAK 351
++ L + G + +A+ L + M + + W ++++G AK
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 14/249 (5%)
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H II + ++ DT + N L +LYS+ G + +A K F+++ E+N++SW+ +S+C G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 254 AKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEI--QFLELGTQVHSMCTKLGYESNLRV 310
++ L +F+E + PNEY L+S + C + + + Q+ S K G++ ++ V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
L+ YLK G I A+++F + + S VTW MI+G KM R + +L
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM---GRSYV--------SL 234
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
LF +L + D + S+VLS C + G+QIHA ++ G D + LI+ Y
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 431 IKCASVVCA 439
+KC V+ A
Sbjct: 295 VKCGRVIAA 303
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 14/322 (4%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L C + VH + +K D KC + DAR+ FD +
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 137 VVAWTTLMLGYVQ---NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
VV + ++ GY + A ++F +M PS+ T L A SL SL +Q
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ 475
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H + KY ++ D G+AL +YS C L+ + F +K K+++ W + + +
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSE 535
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
++ L +F+E+ +P+E+T ++++ + ++LG + H K G E N + N+
Sbjct: 536 NEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNA 595
Query: 314 LLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLF 373
LL +Y K G +A F +V WN++I+ +A E G +AL +
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE-----------GKKALQML 644
Query: 374 SKLNCSGMKLDLFTFSSVLSVC 395
K+ G++ + TF VLS C
Sbjct: 645 EKMMSEGIEPNYITFVGVLSAC 666
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 187/375 (49%), Gaps = 19/375 (5%)
Query: 71 SSFYIP-LLQQCIDKRS-FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
S F P +L+ C R S VHG I+K G +D + GN+ DA +
Sbjct: 99 SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKV 158
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
FD MP R++VAW+TL+ ++N A +F M+ G P T+ + C L L
Sbjct: 159 FDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCL 218
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
+ +H I + D D ++ N+L ++YSKCG L + + F++I +KN +SWTA ISS
Sbjct: 219 RIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
++K LR F EM+ ++PN TL SVLS C I + G VH + + N
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNY 338
Query: 309 R-VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIA--GHAKMMEQSRDNLYACWN 365
+ +L+ LY + G + + + + + + D ++V WN++I+ H M+ Q
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ---------- 388
Query: 366 GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTS 425
AL LF ++ +K D FT +S +S C G+QIH I+T +SD V S
Sbjct: 389 ---ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNS 444
Query: 426 LINMYIKCASVVCAS 440
LI+MY K SV AS
Sbjct: 445 LIDMYSKSGSVDSAS 459
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 190/373 (50%), Gaps = 14/373 (3%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
E D+ I +++ C + + VHG I + D KCG++ + R
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
F+ + ++N V+WT ++ Y + + A F EM+ +G P++ TL L++C +
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 188 LKSGEQLHAYIIKYHIDFD-TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
++ G+ +H + ++ +D + S+ AL LY++CG+L + + ++N+++W + IS
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
G + L +F +M+++ ++P+ +TL S +S C + LG Q+H +
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD 438
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG 366
V+NSL+ +Y K G + A +F + S+VTWN+M+ G ++ N
Sbjct: 439 EF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN-----------GNS 486
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
EA++LF + S ++++ TF +V+ C + + +G+ +H + I +G L D+ T+L
Sbjct: 487 VEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTAL 545
Query: 427 INMYIKCASVVCA 439
I+MY KC + A
Sbjct: 546 IDMYAKCGDLNAA 558
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+CG + D + RN+VAW +L+ Y A +F +M+ P TLA
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+++AC + + G+Q+H ++I+ + D V N+L +YSK G ++ A F +IK ++
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V++W + + +G + + + +F M ++ NE T +V+ C I LE G VH
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH 529
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG---HAKMME 354
G + +L +L+ +Y K G + A+ +F+ M S+V+W++MI H ++
Sbjct: 530 KLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRI-- 586
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE 405
A++ F+++ SG K + F +VLS CG + +G+
Sbjct: 587 ------------GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 14/268 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HGH+++T + D K G+++ A F+ + R+VV W +++ G+ QN
Sbjct: 427 IHGHVIRT-DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 153 PKHAFHVFDEMLHTGSYPSMN--TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
A +FD M H SY MN T + AC+S+ SL+ G+ +H +I + D
Sbjct: 486 SVEAISLFDYMYH--SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTD 542
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
AL +Y+KCG L A F+ + ++++SW++ I++ G G+ + F +M+ +
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTK 602
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
PNE +VLS C +E G ++ G N + L + G + EA
Sbjct: 603 PNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRT 662
Query: 331 FKGMD---DASLVTWNAMIAG---HAKM 352
K M DAS+ W +++ G H KM
Sbjct: 663 IKEMPFLADASV--WGSLVNGCRIHQKM 688
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 192/376 (51%), Gaps = 11/376 (2%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
L G ++D +LQ C D +S D + V I G D CG
Sbjct: 84 LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCG 143
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
++++A R FD + + W LM ++ + +F +M+ +G T +
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
+ +SL+S+ GEQLH +I+K SVGN+L + Y K R++ A K F + E++VIS
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W + I+ +G A+KGL +FV+ML ++ + T+ SV + C + + + LG VHS+
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
K + R N+LL +Y K G + A+ +F+ M D S+V++ +MIAG+A R+ L
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA------REGL 377
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
EA+ LF ++ G+ D++T ++VL+ C R +G+++H + D+
Sbjct: 378 -----AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 421 IVGTSLINMYIKCASV 436
V +L++MY KC S+
Sbjct: 433 FVSNALMDMYAKCGSM 448
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 184/356 (51%), Gaps = 12/356 (3%)
Query: 85 RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLM 144
RS + +HG I+K+G E K ++ AR+ FD M R+V++W +++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 145 LGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHID 204
GYV N + VF +ML +G + T+ C + + G +H+ +K
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 205 FDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM 264
+ N L +YSKCG L+ A F+ + +++V+S+T+ I+ G A + +++F EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 265 LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
E + P+ YT+T+VL+ C + L+ G +VH + ++ V N+L+ +Y K G +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 325 GEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFS-KLNCSGMKL 383
EA+++F M +++WN +I G++K N YA EAL+LF+ L
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSK-------NCYA----NEALSLFNLLLEEKRFSP 497
Query: 384 DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
D T + VL C + AF +G +IH ++ G+ SD V SL++MY KC +++ A
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 161/329 (48%), Gaps = 12/329 (3%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
E+D + + + C D R S + VH +K + KCG+++ A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
F M R+VV++T+++ GY + A +F+EM G P + T+ LN C +
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
L G+++H +I + + FD V NAL +Y+KCG ++ A F ++ K++ISW I
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 248 CGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
+ A + L +F +L E P+E T+ VL C + + G ++H + GY S
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG 366
+ V NSL+ +Y K G + A +LF + LV+W MIAG+ G
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH-----------GFG 581
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
EA+ LF+++ +G++ D +F S+L C
Sbjct: 582 KEAIALFNQMRQAGIEADEISFVSLLYAC 610
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Query: 57 EALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXX 113
EA+ L +E EE D +L C R + + VH I + D
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 114 XXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSM 172
KCG+M++A F M +++++W T++ GY +N A +F+ +L + P
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
T+A L AC SL + G ++H YI++ D V N+L +Y+KCG L A F
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
I K+++SWT I+ G G K+ + +F +M ++ +E + S+L C
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 192/402 (47%), Gaps = 27/402 (6%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX--XXXXX 116
S + T + S +I L+++C+ R T HGH+++TG D
Sbjct: 18 FSNPNQPTTNNERSRHISLIERCVSLRQLKQT---HGHMIRTGTFSDPYSASKLFAMAAL 74
Query: 117 XKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTL 175
++E AR+ FD +P+ N AW TL+ Y P + F +M+ + YP+ T
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ A + SL G+ LH +K + D V N+L Y CG L+ A K F IKE
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
K+V+SW + I+ G K L +F +M SE+++ + T+ VLS C +I+ LE G QV
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA--KMM 353
S + NL + N++L +Y K G I +A+ LF M++ VTW M+ G+A +
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 354 EQSRDNL-------YACWNG-----------TEALNLFSKLNCS-GMKLDLFTFSSVLSV 394
E +R+ L WN EAL +F +L MKL+ T S LS
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 395 CGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
C ++ A G IH+ K G + V ++LI+MY KC +
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 3/231 (1%)
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM-LHTGSYPSMNTLAIAL 179
+ E AR + MP++++VAW L+ Y QN +P A VF E+ L + TL L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+AC + +L+ G +H+YI K+ I + V +AL +YSKCG LE + + F +++++V
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL-ELGTQVHSM 298
W+A I G + + +F +M N++PN T T+V C + E + H M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+ G + ++ + + G + +A + M S W A++
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 211/429 (49%), Gaps = 34/429 (7%)
Query: 22 YP-PSSIPIDKGQNISLQKSHKFNT-------HLDPSRYRGFQEALSL-AKEGTEEVDSS 72
+P P+ +PI ++S ++ N HL+ RG AL L A++G +DS
Sbjct: 8 FPSPAKLPIKSQPSVS----NRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSV 63
Query: 73 FYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM 132
+ LL+ CI R F ++VH +++ D K G+ A F+ M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 133 PR---RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
R R+VV+W+ +M Y N R A VF E L G P+ + AC++ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 190 SGEQLHAYIIKY-HIDFDTSVGNALCSLYSKC-GRLEFALKAFKRIKEKNVISWTAAISS 247
G +++K H + D VG +L ++ K E A K F ++ E NV++WT I+
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
C G ++ +R F++M+ + +++TL+SV S C E++ L LG Q+HS + G +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 308 LRVRNSLLYLYLK---RGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
V SL+ +Y K G + + + +F M+D S+++W A+I G+ K C
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK----------NCN 351
Query: 365 NGTEALNLFSKLNCSG-MKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
TEA+NLFS++ G ++ + FTFSS CG + G+Q+ Q K G S+ V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 424 TSLINMYIK 432
S+I+M++K
Sbjct: 412 NSVISMFVK 420
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 192/374 (51%), Gaps = 20/374 (5%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHE-DXXXXXXXXXXXXKCGN-MEDARRAFDH 131
Y +++ C + ++ G +MKTG+ E D K N E+A + FD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
M NVV WT ++ +Q P+ A F +M+ +G TL+ +AC L++L G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKC---GRLEFALKAFKRIKEKNVISWTAAISS- 247
+QLH++ I+ + D V +L +Y+KC G ++ K F R+++ +V+SWTA I+
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 248 CGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
+ A + + +F EM+++ +++PN +T +S C + +G QV K G S
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG 366
N V NS++ +++K + +AQ F+ + + +LV++N + G + + N
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL-----------NF 455
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
+A L S++ + + FTF+S+LS + + +GEQIH+Q +K G + V +L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 427 INMYIKCASVVCAS 440
I+MY KC S+ AS
Sbjct: 516 ISMYSKCGSIDTAS 529
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 149/287 (51%), Gaps = 13/287 (4%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQN-SRPKHAFHVFDEMLHTGSY-PSMNTLAI 177
G+++D R+ FD M +V++WT L+ GY++N + A ++F EM+ G P+ T +
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
A AC +L + G+Q+ K + ++SV N++ S++ K R+E A +AF+ + EKN
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
++S+ + + ++ ++ E+ + + +T S+LS + + G Q+HS
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
KLG N V N+L+ +Y K G I A +F M++ ++++W +MI G AK R
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIR 558
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQG 404
L F+++ G+K + T+ ++LS C + +G
Sbjct: 559 -----------VLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 3/210 (1%)
Query: 86 SFSDTQI---VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTT 142
+ SD ++ V G K G + K MEDA+RAF+ + +N+V++ T
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 143 LMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH 202
+ G +N + AF + E+ S T A L+ ++ S++ GEQ+H+ ++K
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 203 IDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFV 262
+ + V NAL S+YSKCG ++ A + F ++ +NVISWT+ I+ G A + L F
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 263 EMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+M+ E ++PNE T ++LS C + + G
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 12/364 (3%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
+SS + L+Q C ++ I+K G ++ CG++E ARR F
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D + R+ VAW T+++G ++N + + F ML +G P+ T +I LN C+ L S
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G+ +HA II D + NAL +Y CG + A F RI N++SW + IS C
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 250 DSGKAKKGLRIFVEMLSENM-QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
++G ++ + ++ +L + +P+EYT ++ +S E + G +H TKLGYE ++
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
V +LL +Y K AQ +F M + +V W MI GH+++ N
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRL-----------GNSEL 486
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
A+ F ++ + D F+ SSV+ C M QGE H I+TGF + V +L++
Sbjct: 487 AVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVD 546
Query: 429 MYIK 432
MY K
Sbjct: 547 MYGK 550
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 179/370 (48%), Gaps = 17/370 (4%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGN---HEDXXXXXXXXXXXXKCGNMED 124
E+ SS + L ++C+ + +H ++ G E +CG++E
Sbjct: 92 EIASSV-VELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ 150
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSR-PKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
AR+ FD MP RNVV++ L Y +N +AF + M P+ +T + C
Sbjct: 151 ARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCA 210
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
L+ + G L++ IIK + V ++ +YS CG LE A + F + ++ ++W
Sbjct: 211 VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNT 270
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I + K + GL F ML + P ++T + VL+ C ++ LG +H+
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
++L + N+LL +Y G + EA +F + + +LV+WN++I+G + +N +
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS-------ENGF-- 381
Query: 364 WNGTEALNLFSK-LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIV 422
G +A+ ++ + L S + D +TFS+ +S FV G+ +H Q K G+ V V
Sbjct: 382 --GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 423 GTSLINMYIK 432
GT+L++MY K
Sbjct: 440 GTTLLSMYFK 449
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 166/334 (49%), Gaps = 31/334 (9%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTL--MLGYVQNSRPKHAFHVFDEMLHTGSYP----- 170
+C ++E AR+ FD MP+RN+V L + YV H+ +++ GS+
Sbjct: 34 RCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHS-----QIIKLGSFQMIFFM 88
Query: 171 SMNTLAIAL----NACTSLKSLKSGEQLHAYIIKYHIDFDTS---VGNALCSLYSKCGRL 223
+N +A ++ C S+ LK Q+HA ++ T N L S+Y +CG L
Sbjct: 89 PLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSL 148
Query: 224 EFALKAFKRIKEKNVISWTAAISSCGDSGK-AKKGLRIFVEMLSENMQPNEYTLTSVLSQ 282
E A K F ++ +NV+S+ A S+ + A + M E ++PN T TS++
Sbjct: 149 EQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQV 208
Query: 283 CCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTW 342
C ++ + +G+ ++S KLGY N+ V+ S+L +Y G + A+ +F +++ V W
Sbjct: 209 CAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAW 268
Query: 343 NAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFV 402
N MI G K D + + L F + SG+ FT+S VL+ C ++ ++
Sbjct: 269 NTMIVGSLK-----NDKI------EDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 403 QGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
G+ IHA+ I + L+D+ + +L++MY C +
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDM 351
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 20/350 (5%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y +L C S+S +++H I+ + + D CG+M +A F +
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS-YPSMNTLAIALNACTSLKSLKSGE 192
N+V+W +++ G +N + A ++ +L + P T + A++A + G+
Sbjct: 363 NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK 422
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
LH + K + VG L S+Y K E A K F +KE++V+ WT I G
Sbjct: 423 LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLG 482
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
++ ++ F+EM E + + ++L+SV+ C ++ L G H + + G++ + V
Sbjct: 483 NSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCG 542
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--MMEQSRDNLYACWNGTEAL 370
+L+ +Y K G A+ +F + L WN+M+ +++ M+E+ AL
Sbjct: 543 ALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEK-------------AL 589
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE----QIHAQTIKTGF 416
+ F ++ +G D T+ S+L+ C + +QG+ Q+ Q IK GF
Sbjct: 590 SFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGF 639
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 119/292 (40%), Gaps = 6/292 (2%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
L + T D + + + F +++HG + K G K
Sbjct: 392 LLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNR 451
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
E A++ FD M R+VV WT +++G+ + + A F EM + +L+ +
Sbjct: 452 EAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIG 511
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
AC+ + L+ GE H I+ D SV AL +Y K G+ E A F ++
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC 571
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W + + + G +K L F ++L P+ T S+L+ C G + +
Sbjct: 572 WNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK 631
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFK----GMDDASLVTWNAMIAG 348
+ G ++ + + ++ L K G + EA L + G + A L W +++
Sbjct: 632 EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAEL--WRTLLSA 681
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 117/242 (48%), Gaps = 27/242 (11%)
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISW--------TAAISSCGDSGKAKKG--LRI 260
N L S+Y +C LE A K F ++ ++N+++ ++ S S K G I
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 261 FVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR---VRNSLLYL 317
F L+E ++ + +C I L+ Q+H++ G + N+L+ +
Sbjct: 86 FFMPLNEIAS----SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 318 YLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLN 377
Y++ G + +A+ +F M ++V++NA+ + + SR+ +A + A L + +
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAY------SRNPDFASY----AFPLTTHMA 191
Query: 378 CSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVV 437
+K + TF+S++ VC + + G +++Q IK G+ +V+V TS++ MY C +
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 438 CA 439
A
Sbjct: 252 SA 253
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 179/345 (51%), Gaps = 13/345 (3%)
Query: 94 HGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRP 153
H ++K + D K G +ED + F +MP RN W+T++ GY R
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 154 KHAFHVFDEMLHTGSYPSMN--TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
+ A VF+ L S + L++ + + G Q+H IK + ++ N
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
AL ++YSKC L A K F ++N I+W+A ++ +G++ + +++F M S ++P
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKP 320
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+EYT+ VL+ C +I +LE G Q+HS KLG+E +L +L+ +Y K GC+ +A+ F
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
+ + + W ++I+G+ Q+ DN EAL L+ ++ +G+ + T +SV
Sbjct: 381 DCLQERDVALWTSLISGYV----QNSDN-------EEALILYRRMKTAGIIPNDPTMASV 429
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
L C + G+Q+H TIK GF +V +G++L MY KC S+
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 175/356 (49%), Gaps = 16/356 (4%)
Query: 84 KRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTL 143
+R+ + VHG I++TG KCG + A F+ + ++VV+W +L
Sbjct: 27 QRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 144 MLGYVQNSRPKHAFHV---FDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK 200
+ GY QN ++ V F EM P+ TLA A +SL+S G Q HA ++K
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 201 YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRI 260
D V +L +Y K G +E LK F + E+N +W+ +S G+ ++ +++
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 261 FVEMLSENMQ--PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLY 318
F L E + ++Y T+VLS ++ LG Q+H + K G + + N+L+ +Y
Sbjct: 207 FNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 319 LKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNC 378
K + EA +F D + +TW+AM+ G+++ E EA+ LFS++
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES-----------LEAVKLFSRMFS 315
Query: 379 SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+G+K +T VL+ C + +G+Q+H+ +K GF + T+L++MY K
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 371
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 145/278 (52%), Gaps = 11/278 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KC ++ +A + FD RN + W+ ++ GY QN A +F M G PS T+
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
LNAC+ + L+ G+QLH++++K + AL +Y+K G L A K F ++E++
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V WT+ IS + ++ L ++ M + + PN+ T+ SVL C + LELG QVH
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
K G+ + + ++L +Y K G + + ++F+ + +V+WNAMI+G
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG--------- 498
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
L G EAL LF ++ GM+ D TF +++S C
Sbjct: 499 --LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 2/275 (0%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
+ +L C D + + +H ++K G K G + DAR+ FD +
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
R+V WT+L+ GYVQNS + A ++ M G P+ T+A L AC+SL +L+ G+Q+
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H + IK+ + +G+AL ++YSKCG LE F+R K+V+SW A IS +G+
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT-QVHSMCTKLGYESNLRVRNS 313
+ L +F EML+E M+P++ T +++S C F+E G + M ++G + +
Sbjct: 506 DEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYAC 565
Query: 314 LLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
++ L + G + EA+ + + D L W +++
Sbjct: 566 MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLS 600
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 12/270 (4%)
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
P +TL L + ++L +G +H II+ N L + Y+KCG+L A
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKG---LRIFVEMLSENMQPNEYTLTSVLSQCCEI 286
F I K+V+SW + I+ +G +++F EM ++++ PN YTL + +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 287 QFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMI 346
Q +G Q H++ K+ ++ V SL+ +Y K G + + +F M + + TW+ M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 347 AGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
+G+A +R + + NLF + G D + F++VLS + G Q
Sbjct: 192 SGYA-----TRGRVE---EAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQ 242
Query: 407 IHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
IH TIK G L V + +L+ MY KC S+
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESL 272
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
+ P+ TL L+ + + L G VH + G + ++ N L+ Y K G + +A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
+F + +V+WN++I G+++ S + + LF ++ + + +T
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGIS--------SSYTVMQLFREMRAQDILPNAYTL 121
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ + + + G Q HA +K D+ V TSL+ MY K V
Sbjct: 122 AGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLV 169
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 185/359 (51%), Gaps = 13/359 (3%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL+QCID+RS S + + H++K+G + KCG+++ AR+ FD M R+
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASL-KCGDIDYARQVFDGMSERH 129
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
+V W +L+ +++ R K A ++ M+ P TL+ A + L K ++ H
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 197 YIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
+ ++ + VG+AL +Y K G+ A R++EK+V+ TA I G+
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
+ ++ F ML E +QPNEYT SVL C ++ + G +H + K G+ES L + SLL
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 316 YLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSK 375
+YL+ + ++ +FK ++ + V+W ++I+G +++ R+ + AL F K
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG---LVQNGREEM--------ALIEFRK 358
Query: 376 LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ +K + FT SS L C + F +G QIH K GF D G+ LI++Y KC
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 146/278 (52%), Gaps = 11/278 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G +A+ D + ++VV T L++GY Q A F ML P+ T A
Sbjct: 213 KFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L +C +LK + +G+ +H ++K + + +L ++Y +C ++ +L+ FK I+ N
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPN 332
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+SWT+ IS +G+ + L F +M+ ++++PN +TL+S L C + E G Q+H
Sbjct: 333 QVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHG 392
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
+ TK G++ + + L+ LY K GC A+++F + + +++ N MI +A+
Sbjct: 393 IVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQ------ 446
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
N + G EAL+LF ++ G++ + T SVL C
Sbjct: 447 -NGF----GREALDLFERMINLGLQPNDVTVLSVLLAC 479
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 8/279 (2%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y +L C + + + +++HG ++K+G +C ++D+ R F +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
N V+WT+L+ G VQN R + A F +M+ P+ TL+ AL C++L + G Q
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H + KY D D G+ L LY KCG + A F + E +VIS I S +G
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGF 449
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
++ L +F M++ +QPN+ T+ SVL C + +E G ++ K + + N
Sbjct: 450 GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK----DKIMLTND 505
Query: 314 ----LLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
++ L + G + EA++L + + LV W +++
Sbjct: 506 HYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 139/259 (53%), Gaps = 13/259 (5%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L C +S+ + + A+++K + S G+ L KCG +++A + F + E+++
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHI 130
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
++W + I+ ++K+ + ++ M++ N+ P+EYTL+SV ++ + + H +
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGL 190
Query: 299 CTKLGYE-SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
LG E SN+ V ++L+ +Y+K G EA+++ +++ +V A+I G+++ E
Sbjct: 191 AVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGED-- 248
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
TEA+ F + ++ + +T++SVL CG + G+ IH +K+GF
Sbjct: 249 ---------TEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 418 SDVIVGTSLINMYIKCASV 436
S + TSL+ MY++C+ V
Sbjct: 300 SALASQTSLLTMYLRCSLV 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ C + F + + +HG + K G D KCG + AR FD + +V
Sbjct: 375 LRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDV 434
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
++ T++ Y QN + A +F+ M++ G P+ T+ L AC + + ++ G +L
Sbjct: 435 ISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDS 494
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
K I + L + GRLE A + +++ W +S+C K +
Sbjct: 495 FRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMA 554
Query: 258 LRIFVEMLSENMQPNE 273
RI ++L ++P +
Sbjct: 555 ERITRKILE--IEPGD 568
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 180/380 (47%), Gaps = 9/380 (2%)
Query: 54 GFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXX 113
G++ SL + +DS Y L Q S ++ HGH++K+ +
Sbjct: 30 GYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLL 89
Query: 114 XXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
KC + AR+ FD MP RN++++ +L+ GY Q + A +F E
Sbjct: 90 NMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKF 149
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T A AL C L GE LH ++ + + N L +YSKCG+L+ A+ F R
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCC---EIQFLE 290
E++ +SW + IS G A++ L + +M + + Y L SVL CC F+E
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
G +H KLG E ++ VR +LL +Y K G + EA LF M ++VT+NAMI+G
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 351 KMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
+M E + + +EA LF + G++ TFS VL C G QIHA
Sbjct: 330 QMDEITDE------ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHAL 383
Query: 411 TIKTGFLSDVIVGTSLINMY 430
K F SD +G++LI +Y
Sbjct: 384 ICKNNFQSDEFIGSALIELY 403
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 190/410 (46%), Gaps = 23/410 (5%)
Query: 43 FNTHLDPSRYRGF-QEALSL---AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIM 98
FN+ + GF ++A+ L A+E ++D Y L C ++ +++HG ++
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVV 175
Query: 99 KTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFH 158
G + KCG ++ A FD R+ V+W +L+ GYV+ + +
Sbjct: 176 VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLN 235
Query: 159 VFDEMLHTGSYPSMNTLAIALNA-CTSLKS--LKSGEQLHAYIIKYHIDFDTSVGNALCS 215
+ +M G + L L A C +L ++ G +H Y K ++FD V AL
Sbjct: 236 LLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLD 295
Query: 216 LYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK-----AKKGLRIFVEMLSENMQ 270
+Y+K G L+ A+K F + KNV+++ A IS + + + ++F++M ++
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P+ T + VL C + LE G Q+H++ K ++S+ + ++L+ LY G +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSS 390
F + +W +MI H + EQ A +LF +L S ++ + +T S
Sbjct: 416 FASTSKQDIASWTSMIDCHVQ-NEQLE----------SAFDLFRQLFSSHIRPEEYTVSL 464
Query: 391 VLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
++S C A GEQI IK+G + V TS I+MY K ++ A+
Sbjct: 465 MMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 152/308 (49%), Gaps = 16/308 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQ--- 149
+H + K G D K G++++A + F MP +NVV + ++ G++Q
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 150 --NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT 207
+ AF +F +M G PS +T ++ L AC++ K+L+ G Q+HA I K + D
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 208 SVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSE 267
+G+AL LY+ G E ++ F ++++ SWT+ I + + + +F ++ S
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 268 NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEA 327
+++P EYT++ ++S C + L G Q+ K G ++ V+ S + +Y K G + A
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 328 QILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFT 387
+F + + + T++AMI+ A+ + EALN+F + G+K +
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQH-----------GSANEALNIFESMKTHGIKPNQQA 562
Query: 388 FSSVLSVC 395
F VL C
Sbjct: 563 FLGVLIAC 570
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 48 DPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXX 107
D + F+ + + + G E S+F + +L+ C ++ + +H I K D
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSV-VLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 108 XXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG 167
G+ ED + F ++++ +WT+++ +VQN + + AF +F ++ +
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 168 SYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFAL 227
P T+++ ++AC +L SGEQ+ Y IK ID TSV + S+Y+K G + A
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 228 KAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQ 287
+ F ++ +V +++A ISS G A + L IF M + ++PN+ VL CC
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 288 FLELGTQVHSMCTKLGYESNLRVRN--SLLYLYLKRGCIGEAQ--ILFKGMDDASLVTWN 343
+ G + + C K Y N ++ L+ L + G + +A+ IL G D VTW
Sbjct: 575 LVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP-VTWR 632
Query: 344 AMIA 347
A+++
Sbjct: 633 ALLS 636
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 15/386 (3%)
Query: 55 FQEALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
+EA+ L E VD ++ L++ C KR+ + V+ + + +
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-P 170
+ GN+ DA F M RN+ +W L+ GY + A ++ ML G P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
+ T L C + L G+++H ++++Y + D V NAL ++Y KCG ++ A F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
R+ +++ISW A IS ++G +GL +F M ++ P+ TLTSV+S C +
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
LG +H+ G+ ++ V NSL +YL G EA+ LF M+ +V+W MI+G+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 351 KMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
+ A++ + ++ +K D T ++VLS C + G ++H
Sbjct: 375 YNFLPDK-----------AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 411 TIKTGFLSDVIVGTSLINMYIKCASV 436
IK +S VIV +LINMY KC +
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCI 449
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 192/384 (50%), Gaps = 16/384 (4%)
Query: 55 FQEALSLAKE----GTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
F EA+ L G + D + +L+ C + + VH H+++ G D
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
KCG+++ AR FD MPRR++++W ++ GY +N +F M P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
+ TL ++AC L + G +HAY+I D SV N+L +Y G A K F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
R++ K+++SWT IS + K + + M ++++P+E T+ +VLS C + L+
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
G ++H + K S + V N+L+ +Y K CI +A +F + ++++W ++IAG
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-- 473
Query: 351 KMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
+ +R C+ EAL ++ + ++ + T ++ L+ C R+ A + G++IHA
Sbjct: 474 -LRLNNR-----CF---EALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAH 523
Query: 411 TIKTGFLSDVIVGTSLINMYIKCA 434
++TG D + +L++MY++C
Sbjct: 524 VLRTGVGLDDFLPNALLDMYVRCG 547
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 28/318 (8%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KC ++ A F ++PR+NV++WT+++ G N+R A +F + P+ TL
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTA 503
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
AL AC + +L G+++HA++++ + D + NAL +Y +CGR+ A F ++K+
Sbjct: 504 ALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKD 562
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V SW ++ + G+ + +F M+ ++P+E T S+L C + Q + G S
Sbjct: 563 VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFS 622
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMI---------- 346
G NL+ ++ L + G + EA + M W A++
Sbjct: 623 KMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID 682
Query: 347 -----AGHAKMMEQSRD-------NLYA-CWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
A H +++ NLYA C E + + +G+ +D S +
Sbjct: 683 LGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD--AGCSWVE 740
Query: 394 VCGRMVAFVQGEQIHAQT 411
V G++ AF+ ++ H QT
Sbjct: 741 VKGKVHAFLSDDKYHPQT 758
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 96/190 (50%), Gaps = 12/190 (6%)
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
+GK ++ +++ M + +E +++ C + E G++V+S+ + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
N+ L ++++ G + +A +F M + +L +WN ++ G+AK EA+
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFD-----------EAM 180
Query: 371 NLFSK-LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
L+ + L G+K D++TF VL CG + +G+++H ++ G+ D+ V +LI M
Sbjct: 181 CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITM 240
Query: 430 YIKCASVVCA 439
Y+KC V A
Sbjct: 241 YVKCGDVKSA 250
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 114/295 (38%), Gaps = 48/295 (16%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H H+++TG D +CG M A F+ +++V +W L+ GY + +
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQ 578
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG--------------------- 191
+FD M+ + P T L C+ + ++ G
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYAC 638
Query: 192 -----------EQLHAYIIKYHIDFDTSVGNAL---CSLYSKCGRLEFALKAFKRIKEKN 237
++ H +I K + D +V AL C ++ K E + + + +K+
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKS 698
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V + + D GK ++ V + M+ N T+ + S ++E+ +VH+
Sbjct: 699 VGYYILLCNLYADCGKWRE-----VAKVRRMMKENGLTVDAGCS------WVEVKGKVHA 747
Query: 298 MCTKLGYESNLRVRNSLLY-LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
+ Y + N++L Y K +G +I D + ++ + + GH++
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSE 802
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 179/349 (51%), Gaps = 17/349 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH ++K G + KCGN+ AR FD ++VV W +++ GY N
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A +F M S ++ A + C +LK L+ EQLH ++KY FD ++ A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 213 LCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
L YSKC + AL+ FK I NV+SWTA IS + ++ + +F EM + ++P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
NE+T + +L+ I ++VH+ K YE + V +LL Y+K G + EA +F
Sbjct: 396 NEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
G+DD +V W+AM+AG+A+ E A+ +F +L G+K + FTFSS+
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETE-----------AAIKMFGELTKGGIKPNEFTFSSI 500
Query: 392 LSVCGRMVAFV-QGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
L+VC A + QG+Q H IK+ S + V ++L+ MY K ++ A
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 16/345 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +K G +D K N +D R+ FD M RNVV WTTL+ GY +NS
Sbjct: 115 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+F M + G+ P+ T A AL G Q+H ++K +D V N+
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L +LY KCG + A F + + K+V++W + IS +G + L +F M ++ +
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
E + SV+ C ++ L Q+H K G+ + +R +L+ Y K + +A LFK
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 333 GMD-DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
+ ++V+W AMI+G + ++ EA++LFS++ G++ + FT+S +
Sbjct: 355 EIGCVGNVVSWTAMISGF--LQNDGKE---------EAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
L+ + + ++HAQ +KT + VGT+L++ Y+K V
Sbjct: 404 LTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 174/337 (51%), Gaps = 17/337 (5%)
Query: 72 SFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH 131
S + +++ C + + T+ +H ++K G D KC M DA R F
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 132 MP-RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS 190
+ NVV+WT ++ G++QN + A +F EM G P+ T ++ L A + S
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----S 411
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
++HA ++K + + ++VG AL Y K G++E A K F I +K++++W+A ++
Sbjct: 412 PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF-LELGTQVHSMCTKLGYESNLR 309
+G+ + +++F E+ ++PNE+T +S+L+ C + G Q H K +S+L
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
V ++LL +Y K+G I A+ +FK + LV+WN+MI+G+A+ + +A
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQ-----------AMKA 580
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
L++F ++ +K+D TF V + C +GE+
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEK 617
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 15/318 (4%)
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
+A FD P R+ ++ +L+ G+ ++ R + A +F + G + + L
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
+L G QLH IK+ D SVG +L Y K + K F +KE+NV++WT
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
IS + + L +F+ M +E QPN +T + L E G QVH++ K G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ + V NSL+ LYLK G + +A+ILF + S+VTWN+MI+G+A
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA------------ 272
Query: 364 WNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
NG EAL +F + + ++L +F+SV+ +C + EQ+H +K GFL D
Sbjct: 273 -NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 422 VGTSLINMYIKCASVVCA 439
+ T+L+ Y KC +++ A
Sbjct: 332 IRTALMVAYSKCTAMLDA 349
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 3/259 (1%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH ++KT K G +E+A + F + +++VAW+ ++ GY Q
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLK-SLKSGEQLHAYIIKYHIDFDTSVGN 211
+ A +F E+ G P+ T + LN C + S+ G+Q H + IK +D V +
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
AL ++Y+K G +E A + FKR +EK+++SW + IS G+A K L +F EM ++
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS-LLYLYLKRGCIGEAQIL 330
+ T V + C +E G + + + + + NS ++ LY + G + +A +
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 331 FKGM-DDASLVTWNAMIAG 348
+ M + A W ++A
Sbjct: 655 IENMPNPAGSTIWRTILAA 673
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 222 RLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
RL A F + ++ S+ + + G+ ++ R+F+ + M+ + +SVL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 282 QCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVT 341
+ G Q+H C K G+ ++ V SL+ Y+K + + +F M + ++VT
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 342 WNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAF 401
W +I+G+A R+++ E L LF ++ G + + FTF++ L V
Sbjct: 162 WTTLISGYA------RNSM-----NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 402 VQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+G Q+H +K G + V SLIN+Y+KC +V
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 199/437 (45%), Gaps = 59/437 (13%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCI-DKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXX 117
L LA + + DSS + LL CI K S + VH ++K+G +
Sbjct: 7 LKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYS 66
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLG------------------------------- 146
KCG++ED R+ FD MP+RN+ W +++ G
Sbjct: 67 KCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSG 126
Query: 147 YVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFD 206
+ Q+ R + A F M G + + A L+AC+ L + G Q+H+ I K D
Sbjct: 127 FAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSD 186
Query: 207 TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
+G+AL +YSKCG + A + F + ++NV+SW + I+ +G A + L +F ML
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE 246
Query: 267 ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG-YESNLRVRNSLLYLYLKRGCIG 325
++P+E TL SV+S C + +++G +VH K +++ + N+ + +Y K I
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 326 EAQILFKGMDDASLVTWNAMIAGHAK---------MMEQSRDNLYACWNG---------- 366
EA+ +F M +++ +MI+G+A M + + WN
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 367 -TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL------SD 419
EAL+LF L + ++F+++L C + G Q H +K GF D
Sbjct: 367 NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 420 VIVGTSLINMYIKCASV 436
+ VG SLI+MY+KC V
Sbjct: 427 IFVGNSLIDMYVKCGCV 443
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 171/349 (48%), Gaps = 50/349 (14%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH I K+ D KCGN+ DA+R FD M RNVV+W +L+ + QN
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGN 211
A VF ML + P TLA ++AC SL ++K G+++H ++K + D + N
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 212 ALCSLYSKCGRLE-----------------------FALKA--------FKRIKEKNVIS 240
A +Y+KC R++ +A+ A F ++ E+NV+S
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W A I+ +G+ ++ L +F + E++ P Y+ ++L C ++ L LG Q H
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 301 KLGY------ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
K G+ E ++ V NSL+ +Y+K GC+ E ++F+ M + V+WNAMI G A+
Sbjct: 414 KHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ--- 470
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ 403
N Y G EAL LF ++ SG K D T VLS CG FV+
Sbjct: 471 ----NGY----GNEALELFREMLESGEKPDHITMIGVLSACGH-AGFVE 510
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 132/325 (40%), Gaps = 40/325 (12%)
Query: 64 EGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGN-HEDXXXXXXXXXXXXKCGNM 122
E E D ++ C + Q VHG ++K D KC +
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 123 EDARRAFDHMP-------------------------------RRNVVAWTTLMLGYVQNS 151
++AR FD MP RNVV+W L+ GY QN
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDF------ 205
+ A +F + P+ + A L AC L L G Q H +++K+ F
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 206 DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML 265
D VGN+L +Y KCG +E F+++ E++ +SW A I +G + L +F EML
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 266 SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKR-GCI 324
+P+ T+ VLS C F+E G S T+ + LR + + L R G +
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 325 GEAQILFKGMD-DASLVTWNAMIAG 348
EA+ + + M V W +++A
Sbjct: 546 EEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 19/208 (9%)
Query: 56 QEALSL----AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMK------TGNHED 105
+EALSL +E SF +L+ C D H H++K +G +D
Sbjct: 368 EEALSLFCLLKRESVCPTHYSF-ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 106 XXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH 165
KCG +E+ F M R+ V+W +++G+ QN A +F EML
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 166 TGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS-VGNALCSLYSKCGRLE 224
+G P T+ L+AC ++ G + + + DF + + + + GR
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR---DFGVAPLRDHYTCMVDLLGRAG 543
Query: 225 FALKAFKRIKE----KNVISWTAAISSC 248
F +A I+E + + W + +++C
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 179/360 (49%), Gaps = 11/360 (3%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D FY LL++C + +IVH HI+++ D KCG++E+AR+ F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
+ MP+R+ V WTTL+ GY Q+ RP A F++ML G P+ TL+ + A + +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G QLH + +K D + VG+AL LY++ G ++ A F ++ +N +SW A I+
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
+K L +F ML + +P+ ++ S+ C FLE G VH+ K G +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
N+LL +Y K G I +A+ +F + +V+WN+++ +A+ G EA
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG-----------FGKEA 347
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
+ F ++ G++ + +F SVL+ C +G + K G + + +++++
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 143/265 (53%), Gaps = 16/265 (6%)
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
NTL L CT K L G +HA+I++ D +GN L ++Y+KCG LE A K F++
Sbjct: 64 NTL---LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEK 120
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+ +++ ++WT IS + L F +ML PNE+TL+SV+ + G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM 352
Q+H C K G++SN+ V ++LL LY + G + +AQ++F ++ + V+WNA+IAGHA+
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 353 MEQSRDNLYACWNGTE-ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
+GTE AL LF + G + F+++S+ C QG+ +HA
Sbjct: 241 ------------SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 412 IKTGFLSDVIVGTSLINMYIKCASV 436
IK+G G +L++MY K S+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSI 313
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 195/404 (48%), Gaps = 21/404 (5%)
Query: 36 SLQKSHKFNTHLDPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQC--IDKRSFSDTQIV 93
S+ ++ N H++ S +R F SL + +EV+S+ LL +D + + + +
Sbjct: 214 SIAAAYAQNGHIEES-FRIF----SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG--RGI 266
Query: 94 HGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRP 153
HG ++K G G +A F MP +++++W +LM +V + R
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 326
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
A + M+ +G + T AL AC + + G LH ++ + ++ +GNAL
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL 386
Query: 214 CSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE 273
S+Y K G + + + ++ ++V++W A I + K L F M E + N
Sbjct: 387 VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNY 446
Query: 274 YTLTSVLSQCC-EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
T+ SVLS C LE G +H+ G+ES+ V+NSL+ +Y K G + +Q LF
Sbjct: 447 ITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN 506
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
G+D+ +++TWNAM+A +A +G E L L SK+ G+ LD F+FS L
Sbjct: 507 GLDNRNIITWNAMLAANAHHG-----------HGEEVLKLVSKMRSFGVSLDQFSFSEGL 555
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S ++ +G+Q+H +K GF D + + +MY KC +
Sbjct: 556 SAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 183/368 (49%), Gaps = 13/368 (3%)
Query: 71 SSFYIP-LLQQCIDKRS-FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
SSF I L+ C S F + VHG + K+G D G + +R+
Sbjct: 40 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 99
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
F+ MP RNVV+WT+LM+GY P+ ++ M G + N++++ +++C LK
Sbjct: 100 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 159
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
G Q+ ++K ++ +V N+L S+ G +++A F ++ E++ ISW + ++
Sbjct: 160 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 219
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+G ++ RIF M + + N T++++LS + + G +H + K+G++S +
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 279
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
V N+LL +Y G EA ++FK M L++WN+++ A + R +
Sbjct: 280 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM---ASFVNDGRS--------LD 328
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
AL L + SG ++ TF+S L+ C F +G +H + +G + I+G +L++
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 429 MYIKCASV 436
MY K +
Sbjct: 389 MYGKIGEM 396
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 161/349 (46%), Gaps = 17/349 (4%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
QI+ G ++K+G GN++ A FD M R+ ++W ++ Y QN
Sbjct: 164 QII-GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
+ +F +F M + T++ L+ + K G +H ++K D V
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
N L +Y+ GR A FK++ K++ISW + ++S + G++ L + M+S
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
N T TS L+ C F E G +H + G N + N+L+ +Y K G + E++ +
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSS 390
M +V WNA+I G+A+ ++ D +AL F + G+ + T S
Sbjct: 403 LLQMPRRDVVAWNALIGGYAE--DEDPD---------KALAAFQTMRVEGVSSNYITVVS 451
Query: 391 VLSVC---GRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
VLS C G ++ +G+ +HA + GF SD V SLI MY KC +
Sbjct: 452 VLSACLLPGDLLE--RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 498
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 16/325 (4%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
+ L C F +I+HG ++ +G + K G M ++RR MP
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL-KSGE 192
RR+VVAW L+ GY ++ P A F M G + T+ L+AC L + G+
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 467
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
LHAYI+ + D V N+L ++Y+KCG L + F + +N+I+W A +++ G
Sbjct: 468 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 527
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
++ L++ +M S + ++++ + LS ++ LE G Q+H + KLG+E + + N
Sbjct: 528 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 587
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIA--GHAKMMEQSRDNLYACWNGTEAL 370
+ +Y K G IGE + + SL +WN +I+ G E+ C E L
Sbjct: 588 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE------VCATFHEML 641
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVC 395
+ G+K TF S+L+ C
Sbjct: 642 EM-------GIKPGHVTFVSLLTAC 659
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 16/312 (5%)
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL-KS 190
MP RN V+W T+M G V+ F +M G PS +A + AC S+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
G Q+H ++ K + D V A+ LY G + + K F+ + ++NV+SWT+ + D
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
G+ ++ + I+ M E + NE +++ V+S C ++ LG Q+ K G ES L V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TE 368
NSL+ + G + A +F M + ++WN++ A +A+ NG E
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ-------------NGHIEE 227
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
+ +FS + +++ T S++LSV G + G IH +K GF S V V +L+
Sbjct: 228 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 287
Query: 429 MYIKCASVVCAS 440
MY V A+
Sbjct: 288 MYAGAGRSVEAN 299
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 2/257 (0%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +I+ G D KCG++ ++ F+ + RN++ W ++ +
Sbjct: 469 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 528
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ + +M G + + L+A L L+ G+QLH +K + D+ + NA
Sbjct: 529 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNA 588
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+YSKCG + +K +++ SW IS+ G G ++ F EML ++P
Sbjct: 589 AADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 648
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTK-LGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
T S+L+ C ++ G + M + G E + ++ L + G + EA+
Sbjct: 649 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 708
Query: 332 KGMD-DASLVTWNAMIA 347
M + + W +++A
Sbjct: 709 SKMPMKPNDLVWRSLLA 725
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 195/404 (48%), Gaps = 21/404 (5%)
Query: 36 SLQKSHKFNTHLDPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQC--IDKRSFSDTQIV 93
S+ ++ N H++ S +R F SL + +EV+S+ LL +D + + + +
Sbjct: 231 SIAAAYAQNGHIEES-FRIF----SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG--RGI 283
Query: 94 HGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRP 153
HG ++K G G +A F MP +++++W +LM +V + R
Sbjct: 284 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 343
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
A + M+ +G + T AL AC + + G LH ++ + ++ +GNAL
Sbjct: 344 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL 403
Query: 214 CSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE 273
S+Y K G + + + ++ ++V++W A I + K L F M E + N
Sbjct: 404 VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNY 463
Query: 274 YTLTSVLSQCC-EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
T+ SVLS C LE G +H+ G+ES+ V+NSL+ +Y K G + +Q LF
Sbjct: 464 ITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN 523
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
G+D+ +++TWNAM+A +A +G E L L SK+ G+ LD F+FS L
Sbjct: 524 GLDNRNIITWNAMLAANAHH-----------GHGEEVLKLVSKMRSFGVSLDQFSFSEGL 572
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S ++ +G+Q+H +K GF D + + +MY KC +
Sbjct: 573 SAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 616
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 182/364 (50%), Gaps = 13/364 (3%)
Query: 71 SSFYIP-LLQQCIDKRS-FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
SSF I L+ C S F + VHG + K+G D G + +R+
Sbjct: 57 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 116
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
F+ MP RNVV+WT+LM+GY P+ ++ M G + N++++ +++C LK
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
G Q+ ++K ++ +V N+L S+ G +++A F ++ E++ ISW + ++
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+G ++ RIF M + + N T++++LS + + G +H + K+G++S +
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
V N+LL +Y G EA ++FK M L++WN+++ A + R +
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM---ASFVNDGRS--------LD 345
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
AL L + SG ++ TF+S L+ C F +G +H + +G + I+G +L++
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 429 MYIK 432
MY K
Sbjct: 406 MYGK 409
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 161/349 (46%), Gaps = 17/349 (4%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
QI+ G ++K+G GN++ A FD M R+ ++W ++ Y QN
Sbjct: 181 QII-GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
+ +F +F M + T++ L+ + K G +H ++K D V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
N L +Y+ GR A FK++ K++ISW + ++S + G++ L + M+S
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
N T TS L+ C F E G +H + G N + N+L+ +Y K G + E++ +
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSS 390
M +V WNA+I G+A+ ++ D +AL F + G+ + T S
Sbjct: 420 LLQMPRRDVVAWNALIGGYAE--DEDPD---------KALAAFQTMRVEGVSSNYITVVS 468
Query: 391 VLSVC---GRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
VLS C G ++ +G+ +HA + GF SD V SLI MY KC +
Sbjct: 469 VLSACLLPGDLLE--RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 515
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 16/325 (4%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
+ L C F +I+HG ++ +G + K G M ++RR MP
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL-KSGE 192
RR+VVAW L+ GY ++ P A F M G + T+ L+AC L + G+
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
LHAYI+ + D V N+L ++Y+KCG L + F + +N+I+W A +++ G
Sbjct: 485 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 544
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
++ L++ +M S + ++++ + LS ++ LE G Q+H + KLG+E + + N
Sbjct: 545 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 604
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIA--GHAKMMEQSRDNLYACWNGTEAL 370
+ +Y K G IGE + + SL +WN +I+ G E+ C E L
Sbjct: 605 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE------VCATFHEML 658
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVC 395
+ G+K TF S+L+ C
Sbjct: 659 EM-------GIKPGHVTFVSLLTAC 676
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 158/326 (48%), Gaps = 16/326 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G ++ AR FD MP RN V+W T+M G V+ F +M G PS +A
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 178 ALNACTSLKSL-KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
+ AC S+ + G Q+H ++ K + D V A+ LY G + + K F+ + ++
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
NV+SWT+ + D G+ ++ + I+ M E + NE +++ V+S C ++ LG Q+
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
K G ES L V NSL+ + G + A +F M + ++WN++ A +A+
Sbjct: 184 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ----- 238
Query: 357 RDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
NG E+ +FS + +++ T S++LSV G + G IH +K
Sbjct: 239 --------NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 290
Query: 415 GFLSDVIVGTSLINMYIKCASVVCAS 440
GF S V V +L+ MY V A+
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEAN 316
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 2/257 (0%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +I+ G D KCG++ ++ F+ + RN++ W ++ +
Sbjct: 486 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 545
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ + +M G + + L+A L L+ G+QLH +K + D+ + NA
Sbjct: 546 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNA 605
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+YSKCG + +K +++ SW IS+ G G ++ F EML ++P
Sbjct: 606 AADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 665
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTK-LGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
T S+L+ C ++ G + M + G E + ++ L + G + EA+
Sbjct: 666 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 725
Query: 332 KGMD-DASLVTWNAMIA 347
M + + W +++A
Sbjct: 726 SKMPMKPNDLVWRSLLA 742
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 12/215 (5%)
Query: 216 LYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYT 275
+Y+K GR++ A F + +N +SW +S G +G+ F +M ++P+ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 276 LTSVLSQCCEI-QFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
+ S+++ C G QVH K G S++ V ++L+LY G + ++ +F+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 335 DDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSV 394
D ++V+W +++ G++ E E ++++ + G+ + + S V+S
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPE-----------EVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 395 CGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
CG + G QI Q +K+G S + V SLI+M
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 204
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL 376
+Y K G + A+ LF M + V+WN M++G ++ LY E + F K+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRV------GLY-----LEGMEFFRKM 49
Query: 377 NCSGMKLDLFTFSSVLSVCGRMVA-FVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
G+K F +S+++ CGR + F +G Q+H K+G LSDV V T+++++Y
Sbjct: 50 CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGL 109
Query: 436 VVCA 439
V C+
Sbjct: 110 VSCS 113
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 191/375 (50%), Gaps = 20/375 (5%)
Query: 65 GTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED 124
G ++ DS Y +L C ++V ++K G ED KCG+M +
Sbjct: 245 GFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAE 303
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
A F +P +VV+WT ++ GY +++ A +F EM H+G + T+ ++AC
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK---RIKEKNVISW 241
+ Q+HA++ K D+SV AL S+YSK G ++ + + F+ I+ +N+++
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN- 422
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
I+S S K K +R+F ML E ++ +E+++ S+LS + L LG QVH K
Sbjct: 423 -VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK 478
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
G +L V +SL LY K G + E+ LF+G+ W +MI+G N Y
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF---------NEY 529
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
EA+ LFS++ G D T ++VL+VC + +G++IH T++ G +
Sbjct: 530 GYLR--EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 422 VGTSLINMYIKCASV 436
+G++L+NMY KC S+
Sbjct: 588 LGSALVNMYSKCGSL 602
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 155/303 (51%), Gaps = 11/303 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VHG+ +K+G D KCG++E++ + F +P ++ W +++ G+ +
Sbjct: 472 VHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGY 531
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ A +F EML G+ P +TLA L C+S SL G+++H Y ++ ID +G+A
Sbjct: 532 LREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSA 591
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L ++YSKCG L+ A + + R+ E + +S ++ IS G + G +F +M+ +
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
+ ++S+L LG QVH+ TK+G + V +SLL +Y K G I + F
Sbjct: 652 SFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
++ L+ W A+IA +A + + N EAL +++ + G K D TF VL
Sbjct: 712 QINGPDLIAWTALIASYA---QHGKAN--------EALQVYNLMKEKGFKPDKVTFVGVL 760
Query: 393 SVC 395
S C
Sbjct: 761 SAC 763
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 159/316 (50%), Gaps = 16/316 (5%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
EDA + F NV W T++ G ++N F +F EM P T + L A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
C SL+ L+ G+ + A +IK + D V A+ LY+KCG + A++ F RI +V+SW
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
T +S S A L IF EM ++ N T+TSV+S C + +QVH+ K
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK 379
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTW-NAMIAGHAKMMEQSRDNL 360
G+ + V +L+ +Y K G I ++ +F+ +DD N MI ++ + +
Sbjct: 380 SGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGK--- 436
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
A+ LF+++ G++ D F+ S+LSV + G+Q+H T+K+G + D+
Sbjct: 437 --------AIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDL 485
Query: 421 IVGTSLINMYIKCASV 436
VG+SL +Y KC S+
Sbjct: 486 TVGSSLFTLYSKCGSL 501
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 19/347 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF---DHMPRRNVVAWTTLMLGYVQ 149
VH + K+G + D K G+++ + + F D + R+N+V ++ + Q
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQ 430
Query: 150 NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
+ +P A +F ML G ++ L+ L L G+Q+H Y +K + D +V
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 210 GNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
G++L +LYSKCG LE + K F+ I K+ W + IS + G ++ + +F EML +
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
P+E TL +VL+ C L G ++H + G + + + ++L+ +Y K G + A+
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 330 LFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFS 389
++ + + V+ +++I+G+ S+ L + LF + SG +D F S
Sbjct: 608 VYDRLPELDPVSCSSLISGY------SQHGLI-----QDGFLLFRDMVMSGFTMDSFAIS 656
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S+L G Q+HA K G ++ VG+SL+ MY K S+
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 158/317 (49%), Gaps = 12/317 (3%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G+M DA + FD +P+ +VV+ ++ GY Q+ + + F +M G + + +
Sbjct: 98 GSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVI 157
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+AC++L++ E + + IK F V +AL ++SK R E A K F+ NV
Sbjct: 158 SACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVY 217
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
W I+ + +F EM +P+ YT +SVL+ C ++ L G V +
Sbjct: 218 CWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARV 277
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
K G E ++ V +++ LY K G + EA +F + + S+V+W M++G+ K S D
Sbjct: 278 IKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK----SNDA 332
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
AL +F ++ SG++++ T +SV+S CGR + Q+HA K+GF D
Sbjct: 333 F-------SALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 420 VIVGTSLINMYIKCASV 436
V +LI+MY K +
Sbjct: 386 SSVAAALISMYSKSGDI 402
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 13/253 (5%)
Query: 183 TSLKSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+ L +L++ + L A++++ Y + FD + +L S YS G + A K F I + +V+S
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
IS ++ LR F +M + NE + SV+S C +Q V K
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
+GY V ++L+ ++ K +A +F+ A++ WN +IAG +
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQ-------- 230
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
N +LF ++ K D +T+SSVL+ C + G+ + A+ IK G DV
Sbjct: 231 ---NYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVF 286
Query: 422 VGTSLINMYIKCA 434
V T+++++Y KC
Sbjct: 287 VCTAIVDLYAKCG 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH +I K G + K G+++D +AF + +++AWT L+ Y Q+ +
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL-KSGEQLHAYIIKYHIDFDTSVGN 211
A V++ M G P T L+AC+ + +S L++ + Y I+ +
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSCGDSGKAKKG 257
+ + GRL A + K + + W +++C G+ + G
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELG 840
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 197/408 (48%), Gaps = 17/408 (4%)
Query: 34 NISLQKSHKFNTHLDPSRYRGFQE-ALSLAK----EGTEEVDSSFYIPLLQQCIDKRSFS 88
N+S + + +NT ++ G+ E A+ L K +G E DS+ L+ C +
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP-DSNTLASLVVACSADGTLF 406
Query: 89 DTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYV 148
Q +H + K G + KC ++E A F NVV W +++ Y
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
+++F +F +M P+ T L C L L+ GEQ+H+ IIK + +
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
V + L +Y+K G+L+ A R K+V+SWT I+ K L F +ML
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
++ +E LT+ +S C +Q L+ G Q+H+ G+ S+L +N+L+ LY + G I E+
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
+ F+ + + WNA+++G +QS +N EAL +F ++N G+ + FTF
Sbjct: 647 LAFEQTEAGDNIAWNALVSG----FQQSGNN-------EEALRVFVRMNREGIDNNNFTF 695
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S + QG+Q+HA KTG+ S+ V +LI+MY KC S+
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 173/363 (47%), Gaps = 17/363 (4%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L C S + +HG ++K G D GN+ A F +M +R+
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V + TL+ G Q + A +F M G P NTLA + AC++ +L G+QLHA
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
Y K + + AL +LY+KC +E AL F + +NV+ W + + G +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
RIF +M E + PN+YT S+L C + LELG Q+HS K ++ N V + L+
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 317 LYLKRGCIGEAQ---ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLF 373
+Y K G + A I F G D +V+W MIAG+ + + AL F
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKD---VVSWTTMIAGYTQYNFDDK-----------ALTTF 579
Query: 374 SKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
++ G++ D ++ +S C + A +G+QIHAQ +GF SD+ +L+ +Y +C
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 434 ASV 436
+
Sbjct: 640 GKI 642
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 13/365 (3%)
Query: 77 LLQQCIDKR-SFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR 135
LL+ C+ S + + +H I+K G + G++ A + FD MP R
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLK-SLKSGEQL 194
+ W ++ + F +F M+ P+ T + L AC + EQ+
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
HA I+ + T V N L LYS+ G ++ A + F ++ K+ SW A IS +
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSL 314
+ +R+F +M + P Y +SVLS C +I+ LE+G Q+H + KLG+ S+ V N+L
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 315 LYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFS 374
+ LY G + A+ +F M VT+N +I G L C G +A+ LF
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING-----------LSQCGYGEKAMELFK 378
Query: 375 KLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+++ G++ D T +S++ C +G+Q+HA T K GF S+ + +L+N+Y KCA
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 435 SVVCA 439
+ A
Sbjct: 439 DIETA 443
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y +L+ CI + +H I+KT + K G ++ A
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
++VV+WTT++ GY Q + A F +ML G L A++AC L++LK G+Q
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+HA D NAL +LYS+CG++E + AF++ + + I+W A +S SG
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
++ LR+FV M E + N +T S + E ++ G QVH++ TK GY+S V N+
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 314 LLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLF 373
L+ +Y K G I +A+ F + + V+WNA+I ++K G+EAL+ F
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG-----------FGSEALDSF 781
Query: 374 SKLNCSGMKLDLFTFSSVLSVCGRM 398
++ S ++ + T VLS C +
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHI 806
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 170/354 (48%), Gaps = 11/354 (3%)
Query: 86 SFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLML 145
+F + +H I+ G + + G ++ ARR FD + ++ +W ++
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 146 GYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDF 205
G +N A +F +M G P+ + L+AC ++SL+ GEQLH ++K
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 206 DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML 265
DT V NAL SLY G L A F + +++ +++ I+ G +K + +F M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 266 SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG 325
+ ++P+ TL S++ C L G Q+H+ TKLG+ SN ++ +LL LY K I
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 326 EAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDL 385
A F + ++V WN M+ + +++ R+ + +F ++ + +
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYG-LLDDLRN----------SFRIFRQMQIEEIVPNQ 490
Query: 386 FTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+T+ S+L C R+ GEQIH+Q IKT F + V + LI+MY K + A
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 15/282 (5%)
Query: 161 DEMLHTGSYPSMNTLAIALNACTSLK-SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSK 219
D + + G P+ TL L C SL G +LH+ I+K +D + + L Y
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132
Query: 220 CGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSV 279
G L A K F + E+ + +W I + +FV M+SEN+ PNE T + V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 280 LSQC--CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA 337
L C + F ++ Q+H+ G + V N L+ LY + G + A+ +F G+
Sbjct: 193 LEACRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 338 SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
+W AMI+G +K ++ EA+ LF + G+ + FSSVLS C +
Sbjct: 252 DHSSWVAMISGLSKNECEA-----------EAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 398 MVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+ + GEQ+H +K GF SD V +L+++Y +++ A
Sbjct: 301 IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%)
Query: 81 CIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAW 140
C ++ + Q +H +G D +CG +E++ AF+ + +AW
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAW 660
Query: 141 TTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK 200
L+ G+ Q+ + A VF M G + T A+ A + ++K G+Q+HA I K
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 201 YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRI 260
D +T V NAL S+Y+KCG + A K F + KN +SW A I++ G + L
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 780
Query: 261 FVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
F +M+ N++PN TL VLS C I ++ G
Sbjct: 781 FDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 176/345 (51%), Gaps = 11/345 (3%)
Query: 92 IVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
+V + G+ D + G ++DAR F M +VVAW ++ G+ +
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
A F M + + +TL L+A + +L G +HA IK + + VG+
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
+L S+YSKC ++E A K F+ ++EKN + W A I +G++ K + +F++M S
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+++T TS+LS C LE+G+Q HS+ K NL V N+L+ +Y K G + +A+ +F
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
+ M D VTWN +I + + D N +EA +LF ++N G+ D +S
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQ------DE-----NESEAFDLFKRMNLCGIVSDGACLAST 535
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
L C + QG+Q+H ++K G D+ G+SLI+MY KC +
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 174/370 (47%), Gaps = 14/370 (3%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
+D + LL C H I+K ++ KCG +EDAR+
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
F+ M R+ V W T++ YVQ+ AF +F M G LA L ACT + L
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
G+Q+H +K +D D G++L +YSKCG ++ A K F + E +V+S A I+
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+ ++ + +F EML+ + P+E T +++ C + + L LGTQ H TK G+ S
Sbjct: 606 SQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 309 RVRN-SLLYLYLKRGCIGEAQILFKGMDDA-SLVTWNAMIAGHAKMMEQSRDNLYACWNG 366
SLL +Y+ + EA LF + S+V W M++GH S++ Y
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH------SQNGFY----- 713
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
EAL + ++ G+ D TF +VL VC + + +G IH+ D + +L
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 427 INMYIKCASV 436
I+MY KC +
Sbjct: 774 IDMYAKCGDM 783
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 163/341 (47%), Gaps = 13/341 (3%)
Query: 92 IVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
+VH +K G + KC ME A + F+ + +N V W ++ GY N
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
+F +M +G T L+ C + L+ G Q H+ IIK + + VGN
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
AL +Y+KCG LE A + F+R+ +++ ++W I S + +F M +
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+ L S L C + L G QVH + K G + +L +SL+ +Y K G I +A+ +F
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
+ + S+V+ NA+IAG+ S++NL EA+ LF ++ G+ TF+++
Sbjct: 588 SSLPEWSVVSMNALIAGY------SQNNL------EEAVVLFQEMLTRGVNPSEITFATI 635
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSD-VIVGTSLINMYI 431
+ C + + G Q H Q K GF S+ +G SL+ MY+
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 155/360 (43%), Gaps = 46/360 (12%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L C + + + +H ++K G + KC + DARR F+ + N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V WT L GYV+ P+ A VF+ M G P
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD------------------------- 260
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
H+ F T + Y + G+L+ A F + +V++W IS G G
Sbjct: 261 -----HLAFVTVINT-----YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
+ F M +++ TL SVLS + L+LG VH+ KLG SN+ V +SL+
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL 376
+Y K + A +F+ +++ + V WNAMI G+A E + + LF +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK-----------VMELFMDM 419
Query: 377 NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
SG +D FTF+S+LS C G Q H+ IK ++ VG +L++MY KC ++
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 144/323 (44%), Gaps = 47/323 (14%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KC + A + FD + ++V AW +++ Y +P F + +P+ T +I
Sbjct: 107 KCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI 165
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+ C +++ G Q+H +IK ++ ++ G AL +Y+KC R+ A + F+ I + N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+ WT S +G ++ + +F M E +P+ +V++
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT--------------- 270
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
Y++ G + +A++LF M +V WN MI+GH K
Sbjct: 271 --------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKR----- 305
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
C T A+ F + S +K T SVLS G + G +HA+ IK G
Sbjct: 306 ----GC--ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359
Query: 418 SDVIVGTSLINMYIKCASVVCAS 440
S++ VG+SL++MY KC + A+
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAA 382
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 15/338 (4%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ C + VH +K G D KCG ++DAR+ F +P +V
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V+ L+ GY QN+ + A +F EML G PS T A + AC +SL G Q H
Sbjct: 596 VSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 198 IIKYHIDFDTS-VGNALCSLYSKCGRLEFALKAFKRIKE-KNVISWTAAISSCGDSGKAK 255
I K + +G +L +Y + A F + K+++ WT +S +G +
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
+ L+ + EM + + P++ T +VL C + L G +HS+ L ++ + N+L+
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLI 774
Query: 316 YLYLKRGCI-GEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFS 374
+Y K G + G +Q+ + +++V+WN++I G+AK N YA +AL +F
Sbjct: 775 DMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK-------NGYA----EDALKIFD 823
Query: 375 KLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
+ S + D TF VL+ C G +I I
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 13/301 (4%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXXXX 113
FQE L+ +E + +++ C S + HG I K G + E
Sbjct: 617 FQEMLTRGVNPSEIT----FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL 672
Query: 114 XXXXKCGNMEDARRAFDHMPR-RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSM 172
M +A F + +++V WT +M G+ QN + A + EM H G P
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
T L C+ L SL+ G +H+ I D D N L +Y+KCG ++ + + F
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792
Query: 233 IKEK-NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
++ + NV+SW + I+ +G A+ L+IF M ++ P+E T VL+ C +
Sbjct: 793 MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852
Query: 292 GTQVHSMCT-KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD---DASLVTWNAMIA 347
G ++ M + G E+ + ++ L + G + EA + + DA L W++++
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL--WSSLLG 910
Query: 348 G 348
Sbjct: 911 A 911
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQ--------------FLELGTQVHSMCTKL 302
G RI+ +L + Q ++ L L QC + L +G VHS L
Sbjct: 30 GRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLIL 89
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
G +S R+ N+++ LY K + A+ F ++ + WN+M++ ++ + + +
Sbjct: 90 GIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGK----- 143
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIV 422
L F L + + + FTFS VLS C R G QIH IK G +
Sbjct: 144 ------VLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 423 GTSLINMYIKCASV 436
G +L++MY KC +
Sbjct: 198 GGALVDMYAKCDRI 211
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 190/365 (52%), Gaps = 18/365 (4%)
Query: 77 LLQQCIDKRSFSDTQI------VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFD 130
L + CI SF ++ +H ++K G E+ K + +AR+ FD
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS 190
M R V AWT ++ + ++ A +F+EM+ +G++P+ T + + +C L+ +
Sbjct: 83 EMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISY 142
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
G ++H +IK + ++ VG++L LYSKCG+ + A + F ++ + ISWT ISS
Sbjct: 143 GGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
+ K ++ L+ + EM+ + PNE+T +L + LE G +HS G N+ +
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVL 261
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
+ SL+ Y + + +A + + + W ++++G + NL A EA+
Sbjct: 262 KTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR-------NLRA----KEAV 310
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
F ++ G++ + FT+S++LS+C + + G+QIH+QTIK GF VG +L++MY
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY 370
Query: 431 IKCAS 435
+KC++
Sbjct: 371 MKCSA 375
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
MEDA R + ++V WT+++ G+V+N R K A F EM G P+ T + L+
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEF-ALKAFKRIKEKNVIS 240
C++++SL G+Q+H+ IK + T VGNAL +Y KC E A + F + NV+S
Sbjct: 335 CSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVS 394
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
WT I D G + + +EM+ ++PN TL+ VL C +++ + ++H+
Sbjct: 395 WTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLL 454
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
+ + + V NSL+ Y + A + + M +T+ +++ + E + +
Sbjct: 455 RRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV---TRFNELGKHEM 511
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
AL++ + + G+++D + +S + A G+ +H ++K+GF
Sbjct: 512 --------ALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 421 IVGTSLINMYIKCASV 436
V SL++MY KC S+
Sbjct: 564 SVLNSLVDMYSKCGSL 579
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 162/330 (49%), Gaps = 18/330 (5%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNME-DARRAFDHM 132
Y +L C RS + +H +K G + KC E +A R F M
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 133 PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGE 192
NVV+WTTL+LG V + + F + EM+ P++ TL+ L AC+ L+ ++
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
++HAY+++ H+D + VGN+L Y+ ++++A + +K ++ I++T+ ++ + G
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
K + L + M + ++ ++ +L +S + LE G +H K G+ V N
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEAL 370
SL+ +Y K G + +A+ +F+ + +V+WN +++G A NG + AL
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLAS-------------NGFISSAL 614
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVC--GRM 398
+ F ++ + D TF +LS C GR+
Sbjct: 615 SAFEEMRMKETEPDSVTFLILLSACSNGRL 644
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%)
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
M RR+ + +T+L+ + + + + A V + M G +L ++A +L +L++G
Sbjct: 488 MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG 547
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+ LH Y +K SV N+L +YSKCG LE A K F+ I +V+SW +S +
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASN 607
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
G L F EM + +P+ T +LS C + +LG + + K+
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKI 658
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG++EDA++ F+ + +VV+W L+ G N A F+EM + P T I
Sbjct: 575 KCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLI 634
Query: 178 ALNACTSLKSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLEFA 226
L+AC++ + G + + K Y+I+ L + + GRLE A
Sbjct: 635 LLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEA 684
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 172/347 (49%), Gaps = 14/347 (4%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
QEAL E+ Y LL C+DKR+ D Q VH H++KT
Sbjct: 36 LQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLI 95
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
KC +EDAR+ D MP +NVV+WT ++ Y Q A VF EM+ + P+ T
Sbjct: 96 FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFT 155
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
A L +C L G+Q+H I+K++ D VG++L +Y+K G+++ A + F+ +
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
E++V+S TA I+ G ++ L +F + SE M PN T S+L+ + L+ G Q
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
H + ++NSL+ +Y K G + A+ LF M + + ++WNAM+ G++K
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH-- 333
Query: 355 QSRDNLYACWNGTEALNLFSKL-NCSGMKLDLFTFSSVLSVC--GRM 398
G E L LF + + +K D T +VLS C GRM
Sbjct: 334 ---------GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 26/284 (9%)
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
P+ FH +D +L NAC ++L+ G+++HA++IK T +
Sbjct: 48 PEMGFHGYDALL---------------NACLDKRALRDGQRVHAHMIKTRYLPATYLRTR 92
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L Y KC LE A K + EKNV+SWTA IS +G + + L +F EM+ + +PN
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
E+T +VL+ C L LG Q+H + K Y+S++ V +SLL +Y K G I EA+ +F+
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE 212
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ + +V+ A+IAG+A++ EAL +F +L+ GM + T++S+L
Sbjct: 213 CLPERDVVSCTAIIAGYAQLGLDE-----------EALEMFHRLHSEGMSPNYVTYASLL 261
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ + G+Q H ++ ++ SLI+MY KC ++
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 182/367 (49%), Gaps = 16/367 (4%)
Query: 72 SFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH 131
SFY L+ K + + +H ++ G G++ AR+ FD
Sbjct: 22 SFYASLIDSATHK---AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
+PR + W ++ GY +N+ + A ++ M P T L AC+ L L+ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK--RIKEKNVISWTAAISSCG 249
+HA + + D D V N L +LY+KC RL A F+ + E+ ++SWTA +S+
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
+G+ + L IF +M +++P+ L SVL+ +Q L+ G +H+ K+G E
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
+ SL +Y K G + A+ILF M +L+ WNAMI+G+AK N YA EA
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK-------NGYA----REA 307
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
+++F ++ ++ D + +S +S C ++ + Q ++ ++ + DV + ++LI+M
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDM 367
Query: 430 YIKCASV 436
+ KC SV
Sbjct: 368 FAKCGSV 374
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 174/355 (49%), Gaps = 24/355 (6%)
Query: 50 SRYRGFQEAL------SLAKEGTEEVDSSFYIP-LLQQCIDKRSFSDTQIVHGHIMKTGN 102
SR FQ+AL LA+ + SF P LL+ C + VH + + G
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPD----SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 103 HEDXXXXXXXXXXXXKCGNMEDARRAFD--HMPRRNVVAWTTLMLGYVQNSRPKHAFHVF 160
D KC + AR F+ +P R +V+WT ++ Y QN P A +F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 161 DEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKC 220
+M P L LNA T L+ LK G +HA ++K ++ + + +L ++Y+KC
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 221 GRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVL 280
G++ A F ++K N+I W A IS +G A++ + +F EM++++++P+ ++TS +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 281 SQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
S C ++ LE ++ + Y ++ + ++L+ ++ K G + A+++F D +V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
W+AMI G+ + ++R EA++L+ + G+ + TF +L C
Sbjct: 391 VWSAMIVGYG-LHGRAR----------EAISLYRAMERGGVHPNDVTFLGLLMAC 434
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 13/250 (5%)
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+Q+HA ++ + F + L S G + FA + F + + W A I +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ L ++ M + P+ +T +L C + L++G VH+ +LG+++++ V+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 312 NSLLYLYLKRGCIGEAQILFKGMD--DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
N L+ LY K +G A+ +F+G+ + ++V+W A+++ +A+ E EA
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP-----------MEA 206
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
L +FS++ +K D SVL+ + QG IHA +K G + + SL M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 430 YIKCASVVCA 439
Y KC V A
Sbjct: 267 YAKCGQVATA 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 1/172 (0%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
+ C S + ++ ++ ++ +D KCG++E AR FD R+V
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V W+ +++GY + R + A ++ M G +P+ T L AC ++ G
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSC 248
+ + I+ + L + G L+ A + K + + V W A +S+C
Sbjct: 450 MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 176/359 (49%), Gaps = 47/359 (13%)
Query: 71 SSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFD 130
+S Y L+Q C R+ + + VH HI +G KCG++ DAR+ FD
Sbjct: 85 ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFD 144
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY--------------------- 169
MP R++ +W ++ GY + + A +FDEM SY
Sbjct: 145 EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVL 204
Query: 170 -----------PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYS 218
P++ T++IA+ A ++K ++ G+++H +I++ +D D + ++L +Y
Sbjct: 205 YSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 264
Query: 219 KCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTS 278
KCG ++ A F +I EK+V+SWT+ I S + ++G +F E++ +PNEYT
Sbjct: 265 KCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAG 324
Query: 279 VLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDAS 338
VL+ C ++ ELG QVH T++G++ +SL+ +Y K G I A+ + G
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 339 LVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
LV+W ++I G A+ NG EAL F L SG K D TF +VLS C
Sbjct: 385 LVSWTSLIGGCAQ-------------NGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HGHI++ G D KCG +++AR FD + ++VV+WT+++ Y ++SR
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ F +F E++ + P+ T A LNAC L + + G+Q+H Y+ + D + ++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L +Y+KCG +E A + +++SWT+ I C +G+ + L+ F +L +P+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 273 EYTLTSVLSQCCEIQFLELGTQ 294
T +VLS C +E G +
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLE 441
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 139/310 (44%), Gaps = 43/310 (13%)
Query: 162 EMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG 221
++L P +T + C+ ++L+ G+++H +I + N L +Y+KCG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 222 RLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSE-------------- 267
L A K F + +++ SW ++ + G ++ ++F EM +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 268 ------------------NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
N +PN +T++ ++ ++ + G ++H + G +S+
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
+ +SL+ +Y K GCI EA+ +F + + +V+W +MI D + E
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI-----------DRYFKSSRWREG 303
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
+LFS+L S + + +TF+ VL+ C + G+Q+H + GF +SL++M
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 430 YIKCASVVCA 439
Y KC ++ A
Sbjct: 364 YTKCGNIESA 373
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
+K LR V++L +P T +++ C + + LE G +VH G+ + + N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 314 LLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--MMEQSR---DNLYA----CW 364
LL +Y K G + +A+ +F M + L +WN M+ G+A+ ++E++R D + W
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 365 NG-----------TEALNLFSKLN-CSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
EAL L+S + + ++FT S ++ + +G++IH +
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 413 KTGFLSDVIVGTSLINMYIKCASV 436
+ G SD ++ +SL++MY KC +
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCI 269
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 16/237 (6%)
Query: 29 IDKGQNISLQKSHK--------FNTHLDPSRYRGFQEALSLAKE---GTEEVDSSFYIPL 77
ID+ +NI + K + + SR+R E SL E E + + +
Sbjct: 269 IDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR---EGFSLFSELVGSCERPNEYTFAGV 325
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L C D + + VHG++ + G KCGN+E A+ D P+ ++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG-EQLHA 196
V+WT+L+ G QN +P A FD +L +G+ P T L+ACT ++ G E ++
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSCGDSG 252
K+ + + L L ++ GR E + K + W + + C G
Sbjct: 446 ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 183/388 (47%), Gaps = 32/388 (8%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
V S Y +L+ C +H H +K+ D KC NM+DA+
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
FD+ N ++ ++ GY Q A +F ++ +G +L+ AC +K L
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
G Q++ IK + D V NA +Y KC L A + F ++ ++ +SW A I++
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+GK + L +FV ML ++P+E+T S+L C L G ++HS K G SN
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNS 517
Query: 309 RVRNSLLYLYLKRGCIGEAQIL----------------FKGMDDASL----VTWNAMIAG 348
V SL+ +Y K G I EA+ + + M + L V+WN++I+G
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
+ M EQS D A LF+++ G+ D FT+++VL C + + G+QIH
Sbjct: 578 YV-MKEQSED----------AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 409 AQTIKTGFLSDVIVGTSLINMYIKCASV 436
AQ IK SDV + ++L++MY KC +
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDL 654
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 183/391 (46%), Gaps = 22/391 (5%)
Query: 56 QEALSLAKEGTEEVDSSFYIP-------LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXX 108
Q AL L K+ + S + P LLQ + R F +V + D
Sbjct: 61 QGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM----PLRDVVS 116
Query: 109 XXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS 168
K +M A F+ MP R+VV+W +++ GY+QN + VF +M G
Sbjct: 117 WNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 169 YPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALK 228
T AI L C+ L+ G Q+H +++ D D +AL +Y+K R +L+
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 229 AFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF 288
F+ I EKN +SW+A I+ C + L+ F EM N ++ SVL C +
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
L LG Q+H+ K + ++ VR + L +Y K + +AQILF ++ + ++NAMI G
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
+++ E+ +G +AL LF +L SG+ D + S V C + +G QI+
Sbjct: 357 YSQ--EE---------HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 409 AQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
IK+ DV V + I+MY KC ++ A
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 176/379 (46%), Gaps = 15/379 (3%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXK 118
+ + +EG E D + +L+ C S +HG +++ G D K
Sbjct: 169 VDMGREGIE-FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
++ R F +P +N V+W+ ++ G VQN+ A F EM + S + A
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L +C +L L+ G QLHA+ +K D V A +Y+KC ++ A F + N
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
S+ A I+ K L +F ++S + +E +L+ V C ++ L G Q++ +
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
K ++ V N+ + +Y K + EA +F M V+WNA+IA H EQ+
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH----EQNG- 462
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC-GRMVAFVQGEQIHAQTIKTGFL 417
G E L LF + S ++ D FTF S+L C G + + G +IH+ +K+G
Sbjct: 463 ------KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY--GMEIHSSIVKSGMA 514
Query: 418 SDVIVGTSLINMYIKCASV 436
S+ VG SLI+MY KC +
Sbjct: 515 SNSSVGCSLIDMYSKCGMI 533
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 188/417 (45%), Gaps = 41/417 (9%)
Query: 7 VAVTATLKLHPQFKKYPPSSIPIDKGQNISLQKSHKFNTHLDPSRYRGFQEALSLAKE-- 64
+ TATL ++ + + I D +N++ Q + T + GF+ L +
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH-GFKALLLFHRLMS 375
Query: 65 ---GTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGN 121
G +E+ S + + C + S+ ++G +K+ D KC
Sbjct: 376 SGLGFDEISLS---GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
+ +A R FD M RR+ V+W ++ + QN + +F ML + P T L A
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NV-- 238
CT SL G ++H+ I+K + ++SVG +L +YSKCG +E A K R ++ NV
Sbjct: 493 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSG 551
Query: 239 -----------------ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
+SW + IS +++ +F M+ + P+++T +VL
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Query: 282 QCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVT 341
C + LG Q+H+ K +S++ + ++L+ +Y K G + +++++F+ VT
Sbjct: 612 TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 671
Query: 342 WNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRM 398
WNAMI G+A + G EA+ LF ++ +K + TF S+L C M
Sbjct: 672 WNAMICGYAHHGK-----------GEEAIQLFERMILENIKPNHVTFISILRACAHM 717
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 22/277 (7%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR-NV-------------- 137
+H I+K+G + KCG +E+A + +R NV
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563
Query: 138 -----VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGE 192
V+W +++ GYV + + A +F M+ G P T A L+ C +L S G+
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
Q+HA +IK + D + + L +YSKCG L + F++ ++ ++W A I G
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 683
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK-LGYESNLRVR 311
K ++ +++F M+ EN++PN T S+L C + ++ G + M + G + L
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743
Query: 312 NSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
++++ + K G + A L + M +A V W ++
Sbjct: 744 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 44/334 (13%)
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS 190
HM R +VV++ + + R +F F + L+ + S + C +L+
Sbjct: 9 HMTR-SVVSFNRCLTEKISYRRVP-SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALEL 66
Query: 191 GEQLHAYIIKYHI------------------DF-------------DTSVGNALCSLYSK 219
G+Q HA++I DF D N + + YSK
Sbjct: 67 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 220 CGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSV 279
+ A F + ++V+SW + +S +G++ K + +FV+M E ++ + T +
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 280 LSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL 339
L C ++ LG Q+H + ++G ++++ ++LL +Y K E+ +F+G+ + +
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 340 VTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMV 399
V+W+A+IAG + +NL + AL F ++ + ++SVL C +
Sbjct: 247 VSWSAIIAGCVQ------NNLLSL-----ALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 400 AFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
G Q+HA +K+ F +D IV T+ ++MY KC
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 4/182 (2%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D Y +L C + S + +H ++K D KCG++ D+R F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
+ RR+ V W ++ GY + + + A +F+ M+ P+ T L AC + +
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721
Query: 190 SGEQLHAYIIK--YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAIS 246
G + + Y++K Y +D + + + K G+++ AL+ + + E + + W +
Sbjct: 722 KGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 247 SC 248
C
Sbjct: 781 VC 782
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 169/313 (53%), Gaps = 13/313 (4%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
+ DA + F P +N ++W L+ GY ++ AF++F EM G P+ TL L
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM 134
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVIS 240
CTSL L GEQ+H + IK D D +V N L ++Y++C R+ A F+ ++ EKN ++
Sbjct: 135 CTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT 194
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
WT+ ++ +G A K + F ++ E Q N+YT SVL+ C + +G QVH
Sbjct: 195 WTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIV 254
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
K G+++N+ V+++L+ +Y K + A+ L +GM+ +V+WN+MI G R L
Sbjct: 255 KSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCV------RQGL 308
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ-GEQIHAQTIKTGFLSD 419
EAL++F +++ MK+D FT S+L+ ++ H +KTG+ +
Sbjct: 309 IG-----EALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 420 VIVGTSLINMYIK 432
+V +L++MY K
Sbjct: 364 KLVNNALVDMYAK 376
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 171/349 (48%), Gaps = 19/349 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP-RRNVVAWTTLMLGYVQNS 151
+HGH +KTG D +C + +A F+ M +N V WT+++ GY QN
Sbjct: 147 IHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNG 206
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
A F ++ G+ + T L AC S+ + + G Q+H I+K + V +
Sbjct: 207 FAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQS 266
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
AL +Y+KC +E A + ++ +V+SW + I C G + L +F M +M+
Sbjct: 267 ALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKI 326
Query: 272 NEYTLTSVLSQCCEIQFLEL--GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
+++T+ S+L+ C + E+ + H + K GY + V N+L+ +Y KRG + A
Sbjct: 327 DDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 330 LFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFT 387
+F+GM + +++W A++ G+ NG+ EAL LF + G+ D
Sbjct: 386 VFEGMIEKDVISWTALVTGNTH-------------NGSYDEALKLFCNMRVGGITPDKIV 432
Query: 388 FSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+SVLS + G+Q+H IK+GF S + V SL+ MY KC S+
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSL 481
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 130/261 (49%), Gaps = 3/261 (1%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH I+K+G + KC ME AR + M +VV+W ++++G V+
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGL 308
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLK--SLKSGEQLHAYIIKYHIDFDTSVG 210
A +F M T+ LN C +L +K H I+K V
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVN 367
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
NAL +Y+K G ++ ALK F+ + EK+VISWTA ++ +G + L++F M +
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P++ SVLS E+ LE G QVH K G+ S+L V NSL+ +Y K G + +A ++
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 331 FKGMDDASLVTWNAMIAGHAK 351
F M+ L+TW +I G+AK
Sbjct: 488 FNSMEIRDLITWTCLIVGYAK 508
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 123/229 (53%), Gaps = 12/229 (5%)
Query: 206 DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML 265
D N + YS RL A K F+ KN ISW A IS SG + +F EM
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 266 SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG 325
S+ ++PNEYTL SVL C + L G Q+H K G++ ++ V N LL +Y + I
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 326 EAQILFKGMD-DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLD 384
EA+ LF+ M+ + + VTW +M+ G+++ N +A +A+ F L G + +
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQ-------NGFA----FKAIECFRDLRREGNQSN 226
Query: 385 LFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
+TF SVL+ C + A G Q+H +K+GF +++ V ++LI+MY KC
Sbjct: 227 QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKC 275
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 6/213 (2%)
Query: 57 EALSL---AKEGTEEVDSSFYIPLLQQC--IDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
EALS+ E ++D F IP + C + + H I+KTG
Sbjct: 311 EALSMFGRMHERDMKIDD-FTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS 171
K G M+ A + F+ M ++V++WT L+ G N A +F M G P
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK 231
A L+A L L+ G+Q+H IK SV N+L ++Y+KCG LE A F
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFN 489
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM 264
++ +++I+WT I +G + R F M
Sbjct: 490 SMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
G+ +HS + SNL LL K G + EA+ +F M + TWN MI ++
Sbjct: 16 FGSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 351 ---------KMMEQSRDNLYACWNG-----------TEALNLFSKLNCSGMKLDLFTFSS 390
K+ + WN EA NLF ++ G+K + +T S
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 391 VLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
VL +C +V ++GEQIH TIKTGF DV V L+ MY +C +
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRI 176
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 187/370 (50%), Gaps = 21/370 (5%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D + L+ C + + + + +H ++K + D KCG ++ A + F
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSAHKVF 199
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
+ + RNVV WT+++ GYV+N + +F+ M + T + ACT L +L
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G+ H ++K I+ + + +L +Y KCG + A + F +++ WTA I
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG-YESNL 308
+G + L +F +M ++PN T+ SVLS C I+ LELG VH + K+G +++N
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN- 378
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT- 367
V N+L+++Y K +A+ +F+ + +V WN++I+G ++ NG+
Sbjct: 379 -VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ-------------NGSI 424
Query: 368 -EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL--SDVIVGT 424
EAL LF ++N + + T +S+ S C + + G +HA ++K GFL S V VGT
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 425 SLINMYIKCA 434
+L++ Y KC
Sbjct: 485 ALLDFYAKCG 494
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 170/342 (49%), Gaps = 14/342 (4%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y L+ C + + HG ++K+G KCG++ +ARR F+
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
++V WT +++GY N A +F +M P+ T+A L+ C +++L+ G
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H IK I +DT+V NAL +Y+KC + A F+ EK++++W + IS +G
Sbjct: 365 VHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 423
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY--ESNLRVR 311
+ L +F M SE++ PN T+ S+ S C + L +G+ +H+ KLG+ S++ V
Sbjct: 424 IHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVG 483
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
+LL Y K G A+++F +++ + +TW+AMI G+ K + +L
Sbjct: 484 TALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDT-----------IGSLE 532
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
LF ++ K + TF+S+LS CG +G++ + K
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK 574
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 182/402 (45%), Gaps = 33/402 (8%)
Query: 47 LDPSRYRGFQE---ALSLAKEG--TEEVD--------SSFYIPLLQQCIDKRSFSDTQIV 93
L P+R GF + + KE TEE D SS LL +C + S +
Sbjct: 7 LSPTRRFGFPPRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQS--- 63
Query: 94 HGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRP 153
HG + G D G +DAR FD +P + W ++ Y N
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
++D ++ G + AL ACT L+ L +G+++H ++K FD V L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGL 182
Query: 214 CSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE 273
+Y+KCG ++ A K F I +NV+ WT+ I+ + ++GL +F M N+ NE
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 274 YTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKG 333
YT +++ C ++ L G H K G E + + SLL +Y+K G I A+ +F
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 334 MDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSV 391
LV W AMI G+ NG+ EAL+LF K+ +K + T +SV
Sbjct: 303 HSHVDLVMWTAMIVGYTH-------------NGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
LS CG + G +H +IK G + D V +L++MY KC
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKC 390
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 133/269 (49%), Gaps = 17/269 (6%)
Query: 169 YPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALK 228
Y + + + L+ CT++ SL+ Q H + + D S+ L SLY G + A
Sbjct: 41 YAASSPCFLLLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARL 97
Query: 229 AFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF 288
F +I E + W + + ++ + ++++ ++ + ++ + L C E+Q
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
L+ G ++H K+ N+ V LL +Y K G I A +F + ++V W +MIAG
Sbjct: 158 LDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
+ K ++L C E L LF+++ + + + +T+ +++ C ++ A QG+ H
Sbjct: 217 YVK------NDL--C---EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 409 AQTIKTGF-LSDVIVGTSLINMYIKCASV 436
+K+G LS +V TSL++MY+KC +
Sbjct: 266 GCLVKSGIELSSCLV-TSLLDMYVKCGDI 293
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 279 VLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDAS 338
+LS+C I L Q H + T G ++ + L+ LY G +A+++F + +
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 339 LVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRM 398
W M+ + E E + L+ L G + D FS L C +
Sbjct: 107 FYLWKVMLRCYCLNKES-----------VEVVKLYDLLMKHGFRYDDIVFSKALKACTEL 155
Query: 399 VAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
G++IH Q +K +V++ T L++MY KC + A
Sbjct: 156 QDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSA 195
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 183/386 (47%), Gaps = 12/386 (3%)
Query: 50 SRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXX 109
SR EA SL E + + LL+ + Q +H + G D
Sbjct: 123 SRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVM 182
Query: 110 XXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
KC ++ DA+ FD M +R++V+W T++ GY + M G
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
P T +L+ ++ L+ G LH I+K D D + AL ++Y KCG+ E + +
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+ I K+V+ WT IS G+A+K L +F EML + + SV++ C ++
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
+LG VH + GY + NSL+ +Y K G + ++ ++F+ M++ LV+WNA+I+G+
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGY 422
Query: 350 AKMMEQSRDNLYACWNGTEALNLFSKLNCSGM-KLDLFTFSSVLSVCGRMVAFVQGEQIH 408
A+ N+ C +AL LF ++ + ++D FT S+L C A G+ IH
Sbjct: 423 AQ-------NVDLC----KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 409 AQTIKTGFLSDVIVGTSLINMYIKCA 434
I++ +V T+L++MY KC
Sbjct: 472 CIVIRSFIRPCSLVDTALVDMYSKCG 497
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 18/327 (5%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
+++H I+KTG D KCG E + R + +P ++VV WT ++ G ++
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
R + A VF EML +GS S +A + +C L S G +H Y++++ DT
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
N+L ++Y+KCG L+ +L F+R+ E++++SW A IS + K L +F EM + +Q
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 271 P-NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
+ +T+ S+L C L +G +H + + V +L+ +Y K G + AQ
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 330 LFKGMDDASLVTWNAMIAG---HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
F + +V+W +IAG H K G AL ++S+ SGM+ +
Sbjct: 505 CFDSISWKDVVSWGILIAGYGFHGK--------------GDIALEIYSEFLHSGMEPNHV 550
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIK 413
F +VLS C QG +I + ++
Sbjct: 551 IFLAVLSSCSHNGMVQQGLKIFSSMVR 577
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 14/281 (4%)
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
K F ML P T L AC SL+ L G +H ++ D + ++L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 214 CSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE 273
+LY+K G L A K F+ ++E++V+ WTA I +G + + EM + ++P
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 274 YTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKG 333
TL +LS EI L+ +H G++ ++ V NS+L LY K +G+A+ LF
Sbjct: 148 VTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 334 MDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
M+ +V+WN MI+G+A + N +E L L ++ G++ D TF + LS
Sbjct: 205 MEQRDMVSWNTMISGYASV-----------GNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 394 VCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
V G M G +H Q +KTGF D+ + T+LI MY+KC
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCG 294
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 186/402 (46%), Gaps = 18/402 (4%)
Query: 37 LQKSHKFNTHLDP-SRYRGFQEALSLAKE--GTEEVDSSFYIP-LLQQCIDKRSFSDTQI 92
L + FN+H++ S + ++ LS + + +F P LL+ C + S
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H ++ G D K G + AR+ F+ M R+VV WT ++ Y +
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A + +EM G P TL L+ + L+ LH + + Y D D +V N+
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNS 184
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+ +LY KC + A F ++++++++SW IS G + L++ M + ++P+
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
+ T + LS + LE+G +H K G++ ++ ++ +L+ +YLK G + + +
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ + +V W MI+G +M R +AL +FS++ SG L +SV+
Sbjct: 305 TIPNKDVVCWTVMISG---LMRLGR--------AEKALIVFSEMLQSGSDLSSEAIASVV 353
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ C ++ +F G +H ++ G+ D SLI MY KC
Sbjct: 354 ASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
F E L + + E +S ++ C SF VHG++++ G D
Sbjct: 334 FSEMLQSGSDLSSEAIAS----VVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLIT 389
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM-LHTGSYPSMN 173
KCG+++ + F+ M R++V+W ++ GY QN A +F+EM T
Sbjct: 390 MYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSF 449
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T+ L AC+S +L G+ +H +I+ I + V AL +YSKCG LE A + F I
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT 293
K+V+SW I+ G GK L I+ E L M+PN +VLS C ++ G
Sbjct: 510 SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGL 569
Query: 294 QVH-SMCTKLGYESN 307
++ SM G E N
Sbjct: 570 KIFSSMVRDFGVEPN 584
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
G K+ L F ML+ + P+ +T S+L C +Q L G +H G+ S+ +
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
+SL+ LY K G + A+ +F+ M + +V W AMI + SR + EA +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCY------SRAGIVG-----EACS 133
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYI 431
L +++ G+K T +LS ++ Q + +H + GF D+ V S++N+Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLS---GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 432 KCASV 436
KC V
Sbjct: 191 KCDHV 195
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 182/372 (48%), Gaps = 21/372 (5%)
Query: 73 FYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG-NMEDARRAFDH 131
Y LLQ C SF H H++K+G D K G M + RR FD
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
++ ++WT++M GYV A VF EM+ G + TL+ A+ AC+ L ++ G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
H +I + +++ + + L LY A + F + E +VI WTA +S+ +
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 252 GKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
++ L +F M + + P+ T +VL+ C ++ L+ G ++H G SN+ V
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TE 368
+SLL +Y K G + EA+ +F GM + V+W+A++ G+ C NG +
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGY-------------CQNGEHEK 349
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
A+ +F ++ + DL+ F +VL C + A G++IH Q ++ G +VIV ++LI+
Sbjct: 350 AIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALID 405
Query: 429 MYIKCASVVCAS 440
+Y K + AS
Sbjct: 406 LYGKSGCIDSAS 417
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS--YPSMNTLAIALNA 181
DARR FD MP +V+ WT ++ + +N + A +F M H G P +T L A
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM-HRGKGLVPDGSTFGTVLTA 274
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
C +L+ LK G+++H +I I + V ++L +Y KCG + A + F + +KN +SW
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+A + +G+ +K + IF EM +++ Y +VL C + + LG ++H +
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVR 390
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
G N+ V ++L+ LY K GCI A ++ M +++TWNAM++ A + R
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALA---QNGR---- 443
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
G EA++ F+ + G+K D +F ++L+ CG
Sbjct: 444 ----GEEAVSFFNDMVKKGIKPDYISFIAILTACG 474
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 10/292 (3%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D S + +L C + R + +HG ++ G + KCG++ +AR+ F
Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVF 323
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
+ M ++N V+W+ L+ GY QN + A +F EM Y L AC L +++
Sbjct: 324 NGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVLKACAGLAAVR 379
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G+++H ++ + V +AL LY K G ++ A + + ++ +N+I+W A +S+
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALA 439
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK-LGYESNL 308
+G+ ++ + F +M+ + ++P+ + ++L+ C ++ G + K G +
Sbjct: 440 QNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGT 499
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMD---DASLVTWNAMIAGHAKMMEQSR 357
+ ++ L + G EA+ L + + DASL W ++ A + SR
Sbjct: 500 EHYSCMIDLLGRAGLFEEAENLLERAECRNDASL--WGVLLGPCAANADASR 549
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
G+ + +RI S + S+L C ++ G Q H+ K G E++ V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 312 NSLLYLYLKRG-CIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
NSLL LY K G + E + +F G ++W +M++G+ E +AL
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEH-----------VKAL 148
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
+F ++ G+ + FT SS + C + G H I GF + + ++L +Y
Sbjct: 149 EVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY 208
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 183/401 (45%), Gaps = 50/401 (12%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED---ARRAFDH 131
+ LL C ++ +I+H ++K G H + E A F
Sbjct: 37 LSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
+ N++ W T+ G+ +S P A ++ M+ G P+ T L +C K+ K G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR------------------- 232
+Q+H +++K D D V +L S+Y + GRLE A K F +
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 233 ------------IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVL 280
I K+V+SW A IS ++G K+ L +F +M+ N++P+E T+ +V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 281 SQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
S C + +ELG QVH G+ SNL++ N+L+ LY K G + A LF+ + ++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA 400
+WN +I G+ M NLY EAL LF ++ SG + T S+L C + A
Sbjct: 334 SWNTLIGGYTHM------NLY-----KEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 401 FVQGEQIHAQTIK--TGFLSDVIVGTSLINMYIKCASVVCA 439
G IH K G + + TSLI+MY KC + A
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 166/359 (46%), Gaps = 45/359 (12%)
Query: 71 SSFYIP-LLQQCIDKRSFSDTQIVHGHIMKTG---------------------------- 101
+S+ P +L+ C ++F + Q +HGH++K G
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 102 ---NHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFH 158
H D G +E+A++ FD +P ++VV+W ++ GY + K A
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 159 VFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYS 218
+F +M+ T P +T+ ++AC S++ G Q+H +I + + + NAL LYS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 219 KCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTS 278
KCG LE A F+R+ K+VISW I K+ L +F EML PN+ T+ S
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 279 VLSQCCEIQFLELGTQVHSMCTKL--GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD 336
+L C + +++G +H K G + +R SL+ +Y K G I A +F +
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 337 ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
SL +WNAMI G A M D + +LFS++ G++ D TF +LS C
Sbjct: 433 KSLSSWNAMIFGFA--MHGRAD---------ASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 5/252 (1%)
Query: 55 FQEALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
++EAL L K+ + D S + ++ C S + VH I G +
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNA 306
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS 171
KCG +E A F+ +P ++V++W TL+ GY + K A +F EML +G P+
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKY--HIDFDTSVGNALCSLYSKCGRLEFALKA 229
T+ L AC L ++ G +H YI K + +S+ +L +Y+KCG +E A +
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
F I K++ SW A I G+A +F M +QP++ T +LS C L
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 290 ELGTQVHSMCTK 301
+LG + T+
Sbjct: 487 DLGRHIFRTMTQ 498
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 176/369 (47%), Gaps = 14/369 (3%)
Query: 69 VDSSFYIPLLQQCIDK-RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
++SS + LL++C + +S ++VH I+ G D C + AR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 128 AFDHMP-RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACTSL 185
F++ R +V W +LM GY +NS VF +L+ P T + A +L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
G +H ++K D V ++L +Y+K E +L+ F + E++V SW I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
S SG+A+K L +F M S +PN +LT +S C + +LE G ++H C K G+E
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
+ V ++L+ +Y K C+ A+ +F+ M SLV WN+MI G+ A +
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV-----------AKGD 289
Query: 366 GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTS 425
+ + +++ G + T +S+L C R + G+ IH I++ +D+ V S
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349
Query: 426 LINMYIKCA 434
LI++Y KC
Sbjct: 350 LIDLYFKCG 358
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 177/345 (51%), Gaps = 11/345 (3%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
+++H ++K+G D K E++ + FD MP R+V +W T++ + Q+
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
+ A +F M +G P+ +L +A++AC+ L L+ G+++H +K + D V
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
+AL +Y KC LE A + F+++ K++++W + I G +K + I M+ E +
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P++ TLTS+L C + L G +H + +++ V SL+ LY K G A+ +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSS 390
F +WN MI+ + + N +A+ ++ ++ G+K D+ TF+S
Sbjct: 367 FSKTQKDVAESWNVMISSYISV-----------GNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 391 VLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
VL C ++ A +G+QIH ++ +D ++ ++L++MY KC +
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 153/318 (48%), Gaps = 11/318 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +K G D KC +E AR F MPR+++VAW +++ GYV
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
K + + M+ G+ PS TL L AC+ ++L G+ +H Y+I+ ++ D V +
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L LY KCG A F + ++ SW ISS G K + ++ +M+S ++P+
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
T TSVL C ++ LE G Q+H ++ E++ + ++LL +Y K G EA +F
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ +V+W MI+ + Q R+ LY F ++ G+K D T +VL
Sbjct: 470 SIPKKDVVSWTVMISAYGS-HGQPREALYQ----------FDEMQKFGLKPDGVTLLAVL 518
Query: 393 SVCGRMVAFVQGEQIHAQ 410
S CG +G + +Q
Sbjct: 519 SACGHAGLIDEGLKFFSQ 536
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 64 EGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNME 123
EGT ++ +L C R+ + +HG+++++ + D KCG
Sbjct: 303 EGTRPSQTTL-TSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
A F + +W ++ Y+ A V+D+M+ G P + T L AC+
Sbjct: 362 LAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
L +L+ G+Q+H I + ++ D + +AL +YSKCG + A + F I +K+V+SWT
Sbjct: 422 QLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTV 481
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS-MCTKL 302
IS+ G G+ ++ L F EM ++P+ TL +VLS C ++ G + S M +K
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 303 GYE 305
G E
Sbjct: 542 GIE 544
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 12/288 (4%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
CG +EDA + F M ++ V+W ++ G QN K A F EM G
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L AC L ++ G+Q+HA II+ + VG+AL +Y KC L +A F R+K+KNV
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+SWTA + G +G+A++ ++IF++M + P+ YTL +S C + LE G+Q H
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
G + V NSL+ LY K G I ++ LF M+ V+W AM++ +A+
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR---- 452
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
E + LF K+ G+K D T + V+S C R +G++
Sbjct: 453 -------AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 148/299 (49%), Gaps = 12/299 (4%)
Query: 61 LAKEGTE----------EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
LAKE E ++D + +L C + ++ + +H I++T +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
KC + A+ FD M ++NVV+WT +++GY Q R + A +F +M +G P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
TL A++AC ++ SL+ G Q H I + +V N+L +LY KCG ++ + + F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
+ ++ +SWTA +S+ G+A + +++F +M+ ++P+ TLT V+S C +E
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 291 LGTQVHS-MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
G + M ++ G ++ + ++ L+ + G + EA GM + W +++
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP-SMNTLA 176
K G + + F+ +P R+ V W L+ GY + A ++ M+ S + TL
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSK----------------- 219
L +S + G+Q+H +IK + VG+ L +Y+
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 220 --------------CGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML 265
CG +E AL+ F+ + EK+ +SW A I +G AK+ + F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 266 SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG 325
+ ++ ++Y SVL C + + G Q+H+ + ++ ++ V ++L+ +Y K C+
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 326 EAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDL 385
A+ +F M ++V+W AM+ G+ + EA+ +F + SG+ D
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGR-----------AEEAVKIFLDMQRSGIDPDH 371
Query: 386 FTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+T +S C + + +G Q H + I +G + V V SL+ +Y KC +
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 24/245 (9%)
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI---SSCGDSGKAKKGLRIFVEMLSE 267
N L YSK G + F+++ +++ ++W I S G G A K + S
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 268 NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEA 327
N+ TL ++L + LG Q+H KLG+ES L V + LLY+Y GCI +A
Sbjct: 136 NL--TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDA 193
Query: 328 QILFKGMDDASLVTWNAMIAGHA------------KMMEQSRDNLYACWNG-------TE 368
+ +F G+DD + V +N+++ G + ME+ + A G E
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
A+ F ++ G+K+D + F SVL CG + A +G+QIHA I+T F + VG++LI+
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 429 MYIKC 433
MY KC
Sbjct: 314 MYCKC 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
+ C + S + HG + +G KCG+++D+ R F+ M R+
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V+WT ++ Y Q R +FD+M+ G P TL ++AC+ ++ G Q +
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRYFK 496
Query: 198 IIKYHIDFDTSVGNALC--SLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGKA 254
++ S+G+ C L+S+ GRLE A++ + + I WT +S+C + G
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Query: 255 KKGLRIFVEMLSE--NMQPNEYTLTS 278
+ G + E L E P YTL S
Sbjct: 557 EIG-KWAAESLIELDPHHPAGYTLLS 581
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
+ NL N+LL Y K G I E + F+ + D VTWN +I G+ S L
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGY------SLSGLVGA- 121
Query: 365 NGTEALN-LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
+A N + + + ++ L T + S G + G+QIH Q IK GF S ++VG
Sbjct: 122 -AVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL---GKQIHGQVIKLGFESYLLVG 177
Query: 424 TSLINMYIKCASVVCAS 440
+ L+ MY A+V C S
Sbjct: 178 SPLLYMY---ANVGCIS 191
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 186/390 (47%), Gaps = 16/390 (4%)
Query: 55 FQEALSLAKE---GTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNH--EDXXXX 109
+EALSL E + Y +LQ C+ +R S + +H I+K G+ +
Sbjct: 51 IKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIE 110
Query: 110 XXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
KC +E A F + RNV +W ++ + + A F EML +
Sbjct: 111 TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 170
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
P + AC +LK + G +H Y++K ++ V ++L +Y KCG L+ A K
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
F I ++N ++W A + +GK ++ +R+F +M + ++P T+++ LS + +
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 290
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
E G Q H++ G E + + SLL Y K G I A+++F M + +VTWN +I+G+
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 350 AKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
+ D +Y C + +K D T ++++S R G+++
Sbjct: 351 VQ-QGLVEDAIYMC----------QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 410 QTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
I+ F SD+++ +++++MY KC S+V A
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 177/336 (52%), Gaps = 11/336 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VHG+++K+G + KCG ++DA + FD +P RN VAW LM+GYVQN +
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ A +F +M G P+ T++ L+A ++ ++ G+Q HA I ++ D +G +
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS 314
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L + Y K G +E+A F R+ EK+V++W IS G + + + M E ++ +
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYD 374
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
TL +++S + L+LG +V C + +ES++ + ++++ +Y K G I +A+ +F
Sbjct: 375 CVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD 434
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ L+ WN ++A +A+ + +G EAL LF + G+ ++ T++ ++
Sbjct: 435 STVEKDLILWNTLLAAYAE----------SGLSG-EALRLFYGMQLEGVPPNVITWNLII 483
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
R + + + Q +G + ++I T+++N
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 43/279 (15%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG++ DA++ FD ++++ W TL+ Y ++ A +F M G P++ T +
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+ L L++G+ A + + + N
Sbjct: 482 II-----LSLLRNGQVDEAKDMFLQMQSSGII--------------------------PN 510
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+ISWT ++ +G +++ + +M ++PN +++T LS C + L +G +H
Sbjct: 511 LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG 570
Query: 298 MCTK-LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
+ L + S + + SL+ +Y K G I +A+ +F + L NAMI+ +A
Sbjct: 571 YIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYA------ 624
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
LY N EA+ L+ L G+K D T ++VLS C
Sbjct: 625 ---LYG--NLKEAIALYRSLEGVGLKPDNITITNVLSAC 658
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 13/203 (6%)
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
S+ +SS +G+ K+ L + EM N++ +L C + L G Q+H+
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 300 TKLG--YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
K G Y N + L+ Y K + A++LF + ++ +W A+I ++
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI----- 151
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
G AL F ++ + + D F +V CG + G +H +K+G
Sbjct: 152 ----GLCEG--ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 418 SDVIVGTSLINMYIKCASVVCAS 440
V V +SL +MY KC + AS
Sbjct: 206 DCVFVASSLADMYGKCGVLDDAS 228
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 180/365 (49%), Gaps = 14/365 (3%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y LL +S S T+ +H H++ TG CG++ AR+ F+ MP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS--YPSMNTLAIALNACTSLKSLKSG 191
+ +++++ ++ YV+ A VF M+ G P T A LKS+K G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+H I++ D V NAL ++Y G++E A F +K ++VISW IS +
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
G L +F M++E++ + T+ S+L C ++ LE+G VH + + + V+
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
N+L+ +YLK G + EA+ +F M+ ++TW MI G+ + + +N AL
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE--DGDVEN---------ALE 305
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYI 431
L + G++ + T +S++SVCG + G+ +H ++ SD+I+ TSLI+MY
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 432 KCASV 436
KC V
Sbjct: 366 KCKRV 370
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 12/382 (3%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDK-RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXX 117
+ + EG + V + P + + + +S +VHG I+++ D
Sbjct: 104 IRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYM 163
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
G +E AR FD M R+V++W T++ GY +N A +FD M++ T+
Sbjct: 164 NFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVS 223
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L C LK L+ G +H + + + V NAL ++Y KCGR++ A F R++ ++
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
VI+WT I+ + G + L + M E ++PN T+ S++S C + + G +H
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
+ S++ + SL+ +Y K + +F G W+A+IAG +
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQ------ 397
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
+ L ++AL LF ++ ++ ++ T +S+L + Q IH KTGF+
Sbjct: 398 NELV-----SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 418 SDVIVGTSLINMYIKCASVVCA 439
S + T L+++Y KC ++ A
Sbjct: 453 SSLDAATGLVHVYSKCGTLESA 474
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 15/282 (5%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG M++AR FD M RR+V+ WT ++ GY ++ ++A + M G P+ T+A
Sbjct: 265 KCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
++ C + G+ LH + ++ + D + +L S+Y+KC R++ + F + +
Sbjct: 325 LVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYH 384
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
W+A I+ C + L +F M E+++PN TL S+L + L +H
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMM 353
TK G+ S+L L+++Y K G + A +F G+ + +V W A+I+G+
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+ G AL +F ++ SG+ + TF+S L+ C
Sbjct: 505 D-----------GHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 4/220 (1%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
L+ C D +D + +HG ++ + D KC ++ R F + +
Sbjct: 325 LVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYH 384
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
W+ ++ G VQN A +F M P++ TL L A +L L+ +H
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE----KNVISWTAAISSCGDSG 252
Y+ K L +YSKCG LE A K F I+E K+V+ W A IS G G
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
L++F+EM+ + PNE T TS L+ C +E G
Sbjct: 505 DGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR----NVVAWTTLMLGYV 148
+H ++ KTG KCG +E A + F+ + + +VV W L+ GY
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
+ +A VF EM+ +G P+ T ALNAC+ ++ G L ++++++ S
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS 561
Query: 209 VG-NALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSC 248
+ L + GRL+ A I E W A +++C
Sbjct: 562 NHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAAC 603
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 152/308 (49%), Gaps = 24/308 (7%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH + K G D KCG + AR+ FD + R+ V+W +++ GY +
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
K A +F +M G P TL L AC+ L L++G L I I T +G+
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L S+Y KCG L+ A + F ++ +K+ ++WTA I+ +GK+ + ++F EM + P+
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPD 333
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
TL++VLS C + LELG Q+ + ++L + N+ V L+ +Y K G + EA +F+
Sbjct: 334 AGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFE 393
Query: 333 GMDDASLVTWNAMIA-----GHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFT 387
M + TWNAMI GHAK EAL LF +++ + T
Sbjct: 394 AMPVKNEATWNAMITAYAHQGHAK----------------EALLLFDRMSVPPSDI---T 434
Query: 388 FSSVLSVC 395
F VLS C
Sbjct: 435 FIGVLSAC 442
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 140/285 (49%), Gaps = 19/285 (6%)
Query: 156 AFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCS 215
A ++ M +G P T AC L+ + G +H+ + K ++ D + ++L
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 216 LYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYT 275
+Y+KCG++ +A K F I E++ +SW + IS ++G AK + +F +M E +P+E T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 276 LTSVLSQCCEIQFLELGTQVHSMCT--KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKG 333
L S+L C + L G + M K+G + L + L+ +Y K G + A+ +F
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL--GSKLISMYGKCGDLDSARRVFNQ 293
Query: 334 MDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSV 391
M V W AMI +++ NG +EA LF ++ +G+ D T S+V
Sbjct: 294 MIKKDRVAWTAMITVYSQ-------------NGKSSEAFKLFFEMEKTGVSPDAGTLSTV 340
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
LS CG + A G+QI + ++ V T L++MY KC V
Sbjct: 341 LSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 156/336 (46%), Gaps = 11/336 (3%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ I +F + VHG I+KT D + G+M DA + F+ MP+ +V
Sbjct: 254 LKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V W+ ++ + QN A +F M P+ TL+ LN C K GEQLH
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
++K D D V NAL +Y+KC +++ A+K F + KN +SW I + G+ K
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYL 317
+F E L + E T +S L C + ++LG QVH + K + V NSL+ +
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 318 YLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLN 377
Y K G I AQ +F M+ + +WNA+I+G+ S L G +AL + +
Sbjct: 494 YAKCGDIKFAQSVFNEMETIDVASWNALISGY------STHGL-----GRQALRILDIMK 542
Query: 378 CSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
K + TF VLS C QG++ I+
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 164/344 (47%), Gaps = 11/344 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H I+K G + CG+++ AR F+ + +++V W ++ YV+N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ + + M G P+ T AL A L + + +H I+K D VG
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L LY++ G + A K F + + +V+ W+ I+ +G + + +F+ M + PN
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
E+TL+S+L+ C + LG Q+H + K+G++ ++ V N+L+ +Y K + A LF
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ + V+WN +I G+ + E G +A ++F + + + + TFSS L
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGE-----------GGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
C + + G Q+H IKT V V SLI+MY KC +
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 163/367 (44%), Gaps = 19/367 (5%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
+DS Y +L++CI K + +H I+K G+ D K G +DA
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
FD MP RN V++ TL GY + ++ + G + + L SL
Sbjct: 107 FDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
+ LH+ I+K D + VG AL + YS CG ++ A F+ I K+++ W +S
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
++G + L++ M PN YT + L + + VH K Y +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG-- 366
RV LL LY + G + +A +F M +V W+ MIA C NG
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF-------------CQNGFC 329
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
EA++LF ++ + + + FT SS+L+ C GEQ+H +K GF D+ V +L
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNAL 389
Query: 427 INMYIKC 433
I++Y KC
Sbjct: 390 IDVYAKC 396
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 7/227 (3%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
F+EAL TE SS L C S VHG +KT N +
Sbjct: 437 FREALRNQVSVTEVTFSS----ALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
KCG+++ A+ F+ M +V +W L+ GY + + A + D M P+ T
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
L+ C++ + G++ +I+ H I+ + L + G+L+ A+K + I
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI 612
Query: 234 K-EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE-YTLTS 278
E +V+ W A +S+ + + R E+L N + Y L S
Sbjct: 613 PYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVS 659
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 19/380 (5%)
Query: 67 EEVDSSFYIPL-LQQCIDKRSFSDTQIVHGHIMKTGN-HEDXXXXXXXXXXXXKCGNMED 124
EE +F +P+ L+ C + R + +++HG + K D KCG M +
Sbjct: 55 EEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIE 114
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACT 183
A R FD + + ++V W++++ G+ +N P A F M+ P TL ++ACT
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
L + + G +H ++I+ D S+ N+L + Y+K + A+ FK I EK+VISW+
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWST 234
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I+ +G A + L +F +M+ + +PN T+ VL C LE G + H + + G
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
E+ ++V +L+ +Y+K EA +F + +V+W A+I+G
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT------------- 341
Query: 364 WNGT--EALNLFS-KLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
NG ++ FS L + + D VL C + Q + H+ IK GF S+
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 421 IVGTSLINMYIKCASVVCAS 440
+G SL+ +Y +C S+ AS
Sbjct: 402 FIGASLVELYSRCGSLGNAS 421
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 162/316 (51%), Gaps = 17/316 (5%)
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
DAR+ F M +R++ W TL+ + + + + F M P TL +AL AC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 184 SLKSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
L+ + GE +H ++ K + D VG++L +Y KCGR+ AL+ F +++ ++++W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 243 AAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ +S +G + + F M ++ ++ P+ TL +++S C ++ LG VH +
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
G+ ++L + NSLL Y K EA LFK + + +++W+ +IA + +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ---------- 241
Query: 362 ACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
NG EAL +F+ + G + ++ T VL C QG + H I+ G ++
Sbjct: 242 ---NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETE 298
Query: 420 VIVGTSLINMYIKCAS 435
V V T+L++MY+KC S
Sbjct: 299 VKVSTALVDMYMKCFS 314
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 160/343 (46%), Gaps = 19/343 (5%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D I L+ C + + VHG +++ G D K ++A F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
+ ++V++W+T++ YVQN A VF++M+ G+ P++ T+ L AC + L+
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G + H I+ ++ + V AL +Y KC E A F RI K+V+SW A IS
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 250 DSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+G A + + F ML EN +P+ + VL C E+ FLE HS K G++SN
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG---HAKMMEQSRDNLYACWN 365
+ SL+ LY + G +G A +F G+ V W ++I G H K
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGK-------------- 447
Query: 366 GTEALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
GT+AL F+ + S +K + TF S+LS C +G +I
Sbjct: 448 GTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
+ +GTE + + + +LQ C + H ++ G + KC
Sbjct: 255 MMDDGTEP-NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCF 313
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTLAIAL 179
+ E+A F +PR++VV+W L+ G+ N + F ML + P + L
Sbjct: 314 SPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 373
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+C+ L L+ + H+Y+IKY D + +G +L LYS+CG L A K F I K+ +
Sbjct: 374 GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV 433
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
WT+ I+ G GK K L F M+ S ++PNE T S+LS C + G ++ +
Sbjct: 434 VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKL 493
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 47 LDPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDX 106
L+ +R +E + E D+ + +L C + + H +++K G +
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 107 XXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHT 166
+CG++ +A + F+ + ++ V WT+L+ GY + + A F+ M+ +
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 167 GSY-PSMNTLAIALNACTSLKSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLE 224
P+ T L+AC+ + G ++ ++ Y + + L L + G L+
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 225 FALKAFKRI 233
A++ KR+
Sbjct: 522 TAIEITKRM 530
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 193/405 (47%), Gaps = 16/405 (3%)
Query: 35 ISLQKSHKFNTHL-DPSRYRGFQEALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDT 90
IS ++ N HL S++R EA +E + V S Y L + C + RS S
Sbjct: 43 ISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHG 102
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
+++H + + +C ++EDA + FD M N V+ TT++ Y +
Sbjct: 103 RLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQ 162
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
A +F ML +G P + L + + ++L G Q+HA++I+ + +TS+
Sbjct: 163 GILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIE 222
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
+ ++Y KCG L A + F ++ K ++ T + +G+A+ L++FV++++E ++
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
+ + + VL C ++ L LG Q+H+ KLG ES + V L+ Y+K A
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRA 342
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMK-LDLFTFS 389
F+ + + + V+W+A+I+G+ +M + EA+ F L L+ FT++
Sbjct: 343 FQEIREPNDVSWSAIISGYCQMSQFE-----------EAVKTFKSLRSKNASILNSFTYT 391
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
S+ C + G Q+HA IK + ++LI MY KC
Sbjct: 392 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 129/280 (46%), Gaps = 11/280 (3%)
Query: 156 AFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCS 215
AF EM G S + AC L+SL G LH + + + N +
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQ 126
Query: 216 LYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYT 275
+Y +C LE A K F + E N +S T IS+ + G K + +F ML+ +P
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 276 LTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD 335
T++L + L+ G Q+H+ + G SN + ++ +Y+K G + A+ +F M
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 336 DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
V ++ G+ + ++RD AL LF L G++ D F FS VL C
Sbjct: 247 VKKPVACTGLMVGYTQA-GRARD----------ALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 396 GRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
+ G+QIHA K G S+V VGT L++ YIKC+S
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 169/381 (44%), Gaps = 33/381 (8%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXK 118
+ L EG E DS + +L+ C + + +H + K G + K
Sbjct: 274 VDLVTEGVE-WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIK 332
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
C + E A RAF + N V+W+ ++ GY Q S+ + A F + L + + +N+
Sbjct: 333 CSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF-KSLRSKNASILNSFTYT 391
Query: 179 --LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
AC+ L G Q+HA IK + +AL ++YSKCG L+ A + F+ +
Sbjct: 392 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNP 451
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-V 295
++++WTA IS G A + LR+F +M+S M+PN T +VL+ C +E G +
Sbjct: 452 DIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCL 511
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG---HAK 351
+M K + + ++ +Y + G + EA K M + ++W ++G H
Sbjct: 512 DTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKN 571
Query: 352 MM------EQSRD-------------NLYACWNG--TEALNLFSKLNCSGMKLDLFTFSS 390
+ E+ R NLY W G EA + +N +K +L S
Sbjct: 572 LELGEIAGEELRQLDPEDTAGYVLPFNLYT-WAGKWEEAAEMMKLMNERMLKKELSC--S 628
Query: 391 VLSVCGRMVAFVQGEQIHAQT 411
+ G++ F+ G++ H QT
Sbjct: 629 WIQEKGKIHRFIVGDKHHPQT 649
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES-NLRVR 311
K + EM + + Y+ + C E++ L G +H ++G E+ ++ ++
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQ 121
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
N +L +Y + + +A LF M + + V+ MI+ +A EQ + +A+
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA---EQGILD--------KAVG 170
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYI 431
LFS + SG K ++++L A G QIHA I+ G S+ + T ++NMY+
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 432 KCASVVCA 439
KC +V A
Sbjct: 231 KCGWLVGA 238
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 176/368 (47%), Gaps = 19/368 (5%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDX-XXXXXXXXXXXKCGNMEDARRAFDHMP 133
I LQ+C ++ + Q +HG +++ G +D KCG M A F
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-S 122
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
R+V + L+ G+V N P A + EM G P T L +++ L ++
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKK 181
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN-VISWTAAISSCGDSG 252
+H K D D VG+ L + YSK +E A K F + +++ + W A ++
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
+ + L +F +M E + + +T+TSVLS ++ G +H + K G S++ V N
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN 301
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ +Y K + EA +F+ MD+ L TWN+++ H C + L L
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDY-----------CGDHDGTLAL 350
Query: 373 FSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL----SDVIVGTSLIN 428
F ++ CSG++ D+ T ++VL CGR+ + QG +IH I +G L S+ + SL++
Sbjct: 351 FERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMD 410
Query: 429 MYIKCASV 436
MY+KC +
Sbjct: 411 MYVKCGDL 418
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 156/343 (45%), Gaps = 16/343 (4%)
Query: 73 FYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM 132
+ P L + D SD + VHG K G D K ++EDA++ FD +
Sbjct: 162 YTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDEL 221
Query: 133 PRRN-VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
P R+ V W L+ GY Q R + A VF +M G S +T+ L+A T + +G
Sbjct: 222 PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG 281
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+H +K D V NAL +Y K LE A F+ + E+++ +W + +
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY----ESN 307
G L +F ML ++P+ TLT+VL C + L G ++H G SN
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSN 401
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
+ NSL+ +Y+K G + +A+++F M +WN MI G+ + +C G
Sbjct: 402 EFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYG---------VQSC--GE 450
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
AL++FS + +G+K D TF +L C +G AQ
Sbjct: 451 LALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQ 493
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 15/261 (5%)
Query: 174 TLAIALNACTSLKSLKSGEQLHAYII-KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
T L C K SG+Q+H +++ K +D G +L ++Y+KCG + A+ F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
E++V + A IS +G + + EM + + P++YT S+L ++ ++
Sbjct: 122 -SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV- 179
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA-SLVTWNAMIAGHAK 351
+VH + KLG++S+ V + L+ Y K + +AQ +F + D V WNA++ G+++
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
+ + +AL +FSK+ G+ + T +SVLS G IH
Sbjct: 240 I-----------FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLA 288
Query: 412 IKTGFLSDVIVGTSLINMYIK 432
+KTG SD++V +LI+MY K
Sbjct: 289 VKTGSGSDIVVSNALIDMYGK 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY-ESNLRVRNSLLYLYLKRGCIGEAQIL 330
N T + L +C + + G Q+H + G+ + + R SL+ +Y K G + A ++
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTF 388
F G + + +NA+I+G NG+ +A+ + ++ +G+ D +TF
Sbjct: 119 FGG-SERDVFGYNALISGFVV-------------NGSPLDAMETYREMRANGILPDKYTF 164
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S+L M +++H K GF SD VG+ L+ Y K SV
Sbjct: 165 PSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSV 211
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 195/434 (44%), Gaps = 82/434 (18%)
Query: 76 PLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR 135
P+L+ C+ ++ HG+ K G D K G +++ + F+ MP R
Sbjct: 150 PMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR 209
Query: 136 NVVAWTTLMLGYVQNSRPKHA------FH------------------------------- 158
+VV W ++ Y++ + A FH
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFA 269
Query: 159 -----------VF-----DEMLHTGSYPSM----------------NTLAIALNACTSLK 186
+F E LH+G Y ++ T + L +
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 329
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
SL G+Q+H +K +D +V N+L ++Y K + FA F + E+++ISW + I+
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI-QFLELGTQVHSMCTKLGYE 305
+G + + +F+++L ++P++YT+TSVL + + L L QVH K+
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
S+ V +L+ Y + C+ EA+ILF+ + LV WNAM+AG+ QS D
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYT----QSHD------- 497
Query: 366 GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTS 425
G + L LF+ ++ G + D FT ++V CG + A QG+Q+HA IK+G+ D+ V +
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 426 LINMYIKCASVVCA 439
+++MY+KC + A
Sbjct: 558 ILDMYVKCGDMSAA 571
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 185/399 (46%), Gaps = 13/399 (3%)
Query: 39 KSHKFNTHLDPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIM 98
++ + +L +Y + + E E D +I +L + S + Q VH +
Sbjct: 283 RNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 99 KTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFH 158
K G K AR FD+M R++++W +++ G QN A
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 159 VFDEMLHTGSYPSMNTLAIALNACTSL-KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLY 217
+F ++L G P T+ L A +SL + L +Q+H + IK + D+ V AL Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 218 SKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLT 277
S+ ++ A F+R ++++W A ++ S K L++F M + + +++TL
Sbjct: 463 SRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 278 SVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA 337
+V C + + G QVH+ K GY+ +L V + +L +Y+K G + AQ F +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 338 SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
V W MI+G + E+ R A ++FS++ G+ D FT +++
Sbjct: 582 DDVAWTTMISGCIENGEEER-----------AFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 398 MVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ A QG QIHA +K +D VGTSL++MY KC S+
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 16/305 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN--VVAWTTLMLGYVQN 150
VH H +K N D + M++A F+ R N +VAW +M GY Q+
Sbjct: 439 VHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQS 495
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
+F M G TLA C L ++ G+Q+HAY IK D D V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
+ + +Y KCG + A AF I + ++WT IS C ++G+ ++ +F +M +
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P+E+T+ ++ + LE G Q+H+ KL ++ V SL+ +Y K G I +A L
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSS 390
FK ++ ++ WNAM+ G A+ E G E L LF ++ G+K D TF
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGE-----------GKETLQLFKQMKSLGIKPDKVTFIG 724
Query: 391 VLSVC 395
VLS C
Sbjct: 725 VLSAC 729
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 131/258 (50%), Gaps = 2/258 (0%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH + +K+G D KCG+M A+ AFD +P + VAWTT++ G ++N
Sbjct: 539 VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ AFHVF +M G P T+A A + L +L+ G Q+HA +K + D VG +
Sbjct: 599 EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS 658
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L +Y+KCG ++ A FKRI+ N+ +W A + G+ K+ L++F +M S ++P+
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 273 EYTLTSVLSQCCEIQFL-ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+ T VLS C + E + SM G + + + L + G + +A+ L
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 332 KGMD-DASLVTWNAMIAG 348
+ M +AS + ++A
Sbjct: 779 ESMSMEASASMYRTLLAA 796
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 60/326 (18%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR-----PKHAFHVFDEMLHTGSYPSM 172
KCG++ ARR FD MP R++V+W +++ Y Q+S + AF +F + Y S
Sbjct: 86 KCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSR 145
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
TL+ L C + + E H Y K +D D V AL ++Y K G+++ F+
Sbjct: 146 MTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEE 205
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVL------SQCCEI 286
+ ++V+ W + + + G ++ + + S + PNE TL + S ++
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQV 265
Query: 287 QFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMI 346
+ G S+ S + RN L YL G ++A++
Sbjct: 266 KSFANGNDASSV-------SEIIFRNKGLSEYLHSG------------------QYSALL 300
Query: 347 AGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
A M+E S ++ D TF +L+ ++ + G+Q
Sbjct: 301 KCFADMVE------------------------SDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 407 IHAQTIKTGFLSDVIVGTSLINMYIK 432
+H +K G + V SLINMY K
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCK 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
N+L+ +Y K G + A+ +F M D LV+WN+++A +A+ E +N+ +A
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI------QQAFL 131
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYI 431
LF L + T S +L +C E H K G D V +L+N+Y+
Sbjct: 132 LFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYL 191
Query: 432 KCASV 436
K V
Sbjct: 192 KFGKV 196
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 11/367 (2%)
Query: 56 QEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXX 115
QE +S + E + + +LQ C + + + HG I++ D
Sbjct: 46 QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105
Query: 116 XXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
KCG +E AR+ FD M R++V+W T++ Y +N A +F EM + G S T+
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ L+AC ++LH +K ID + VG AL LY+KCG ++ A++ F+ +++
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
K+ ++W++ ++ + ++ L ++ +++ N++TL+SV+ C + L G Q+
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H++ K G+ SN+ V +S + +Y K G + E+ I+F + + +L WN +I+G AK
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
E + LF K+ GM + TFSS+LSVCG +G + T
Sbjct: 346 K-----------EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 416 FLSDVIV 422
LS +V
Sbjct: 395 GLSPNVV 401
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 165 HTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLE 224
++ + + N + L C ++ + H II+ ++ D ++ N L + YSKCG +E
Sbjct: 54 YSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 113
Query: 225 FALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC- 283
A + F + E++++SW I + + L IF+EM +E + +E+T++SVLS C
Sbjct: 114 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG 173
Query: 284 CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWN 343
LE ++H + K + NL V +LL LY K G I +A +F+ M D S VTW+
Sbjct: 174 VNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWS 232
Query: 344 AMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ 403
+M+AG+ Q++ N EAL L+ + ++ + FT SSV+ C + A ++
Sbjct: 233 SMVAGYV----QNK-------NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 404 GEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
G+Q+HA K+GF S+V V +S ++MY KC S+
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 314
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG ++DA + F+ M ++ V W++++ GYVQN + A ++ + TL+
Sbjct: 209 KCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSS 268
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+ AC++L +L G+Q+HA I K + V ++ +Y+KCG L + F ++EKN
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKN 328
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+ W IS + K+ + +F +M + M PNE T +S+LS C +E G +
Sbjct: 329 LELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Query: 298 -MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
M T G N+ + ++ + + G + EA L K + D + W +++A
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 191/408 (46%), Gaps = 47/408 (11%)
Query: 51 RYRGFQEALSLAKEGTEEVDSS-FYIPLLQQCIDKRSFSDTQIVHGHIMKTGN--HEDXX 107
R + A+SL E+ S Y L Q C ++R+ D +H H++ ++
Sbjct: 38 RSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVI 97
Query: 108 XXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG 167
KCGN+ AR+ FD MP RNVV+WT L+ GYVQ + F +F ML +
Sbjct: 98 LANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SH 156
Query: 168 SYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFAL 227
+P+ TL+ L +C + G+Q+H +K + V NA+ S+Y +C A
Sbjct: 157 CFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAY 212
Query: 228 KA---FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSV----- 279
+A F+ IK KN+++W + I++ KK + +F+ M S+ + + TL ++
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLY 272
Query: 280 ---------LSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKR-GCIGEAQI 329
+S+CC Q+HS+ K G + V +L+ +Y + +
Sbjct: 273 KSSDLVPNEVSKCC--------LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYK 324
Query: 330 LFKGMDDA-SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
LF M +V WN +I +A ++ A++LF +L + D +TF
Sbjct: 325 LFMEMSHCRDIVAWNGIITA------------FAVYDPERAIHLFGQLRQEKLSPDWYTF 372
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
SSVL C +V IHAQ IK GFL+D ++ SLI+ Y KC S+
Sbjct: 373 SSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSL 420
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 11/233 (4%)
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
R++VAW ++ + P+ A H+F ++ P T + L AC L + + +
Sbjct: 333 RDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSI 391
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
HA +IK DT + N+L Y+KCG L+ ++ F + ++V+SW + + + G+
Sbjct: 392 HAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQV 451
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKLGYESNLRVRNS 313
L +F +M ++ P+ T ++LS C +E G ++ SM K L
Sbjct: 452 DSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYAC 508
Query: 314 LLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA-----GHAKMMEQSRDNL 360
++ + + EA+ + K M D V W A++ G+ ++ + + D L
Sbjct: 509 VIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H ++K G D KCG+++ R FD M R+VV+W +++ Y + +
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQ 450
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
VF +M P T L+AC+ ++ G ++ + + + + +
Sbjct: 451 VDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFE-KPETLPQLNHY 506
Query: 213 LC--SLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
C + S+ R A + K++ + + + W A + SC G + G ++ + L E +
Sbjct: 507 ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG-KLAADKLKELV 565
Query: 270 QP 271
+P
Sbjct: 566 EP 567
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 186/376 (49%), Gaps = 13/376 (3%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
LAK + ++ S+ + L C + + +H ++K G H D KCG
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
+ +A F + + + W ++ Y +N A +F M P TL+ ++
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
C+ L G+ +HA + K I +++ +AL +LYSKCG A FK ++EK++++
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSEN--MQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
W + IS +GK K+ L++F +M ++ ++P+ +TSV + C ++ L G QVH
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
K G N+ V +SL+ LY K G A +F M ++V WN+MI+ + SR+
Sbjct: 502 MIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY------SRN 555
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
NL +++LF+ + G+ D + +SVL + ++G+ +H T++ G S
Sbjct: 556 NLPEL-----SIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS 610
Query: 419 DVIVGTSLINMYIKCA 434
D + +LI+MY+KC
Sbjct: 611 DTHLKNALIDMYVKCG 626
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 153/317 (48%), Gaps = 13/317 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH + K KCG DA F M +++VAW +L+ G +N +
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 153 PKHAFHVFDEMLHTGSY--PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
K A VF +M P + + NAC L++L+ G Q+H +IK + + VG
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
++L LYSKCG E ALK F + +N+++W + IS + + + +F MLS+ +
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P+ ++TSVL L G +H +LG S+ ++N+L+ +Y+K G A+ +
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSS 390
FK M SL+TWN MI G+ + C AL+LF ++ +G D TF S
Sbjct: 635 FKKMQHKSLITWNLMIYGYGSHGD--------C---ITALSLFDEMKKAGESPDDVTFLS 683
Query: 391 VLSVCGRMVAFVQGEQI 407
++S C +G+ I
Sbjct: 684 LISACNHSGFVEEGKNI 700
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 176/375 (46%), Gaps = 22/375 (5%)
Query: 71 SSFYIP-LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
S F P LL+ C + S + +HG ++ G D KCG ++ A + F
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 130 DHMPR-------RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNAC 182
D + R+V W +++ GY + R K F ML G P +L+I ++
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 183 TSLKSLK--SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVI 239
+ + G+Q+H ++++ +D D+ + AL +Y K G A + F I++K NV+
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
W I G SG + L +++ + +++ + T L C + + G Q+H
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
K+G ++ V SLL +Y K G +GEA+ +F + D L WNAM+A +A +N
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA-------EN 351
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
Y G AL+LF + + D FT S+V+S C + + G+ +HA+ K S
Sbjct: 352 DY----GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQST 407
Query: 420 VIVGTSLINMYIKCA 434
+ ++L+ +Y KC
Sbjct: 408 STIESALLTLYSKCG 422
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 166/347 (47%), Gaps = 18/347 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP-RRNVVAWTTLMLGYVQNS 151
+HG +++ D K G DA R F + + NVV W +++G+ +
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
+ + ++ + + AL AC+ ++ G Q+H ++K + D V
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCT 311
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
+L S+YSKCG + A F + +K + W A +++ ++ L +F M +++ P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+ +TL++V+S C + G VH+ K +S + ++LL LY K GC +A ++F
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKL--NCSGMKLDLFT 387
K M++ +V W ++I+G C NG EAL +F + + +K D
Sbjct: 432 KSMEEKDMVAWGSLISG-------------LCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 388 FSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+SV + C + A G Q+H IKTG + +V VG+SLI++Y KC
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG 525
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 147/304 (48%), Gaps = 30/304 (9%)
Query: 148 VQNSRPKHAFHVFDEMLHTGSYP---SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHID 204
+Q A H++ + H GS P S+ T L AC++L +L G+ +H ++
Sbjct: 35 IQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWR 92
Query: 205 FDTSVGNALCSLYSKCGRLEFALKAFKR-------IKEKNVISWTAAISSCGDSGKAKKG 257
+D + +L ++Y KCG L++A++ F + ++V W + I + K+G
Sbjct: 93 YDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEG 152
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCC-EIQFL-ELGTQVHSMCTKLGYESNLRVRNSLL 315
+ F ML ++P+ ++L+ V+S C E F E G Q+H + +++ ++ +L+
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALI 212
Query: 316 YLYLKRGCIGEAQILFKGMDDAS-LVTWNAMIAGH--AKMMEQSRDNLYACWNGTEALNL 372
+Y K G +A +F ++D S +V WN MI G + + E S D L +
Sbjct: 213 DMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD-----------LYM 261
Query: 373 FSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
+K N +KL +F+ L C + G QIH +K G +D V TSL++MY K
Sbjct: 262 LAKNN--SVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSK 319
Query: 433 CASV 436
C V
Sbjct: 320 CGMV 323
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 138/258 (53%), Gaps = 3/258 (1%)
Query: 93 VHGHIMKTGNHE-DXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
VHG ++TG + D KC +DA++ FD MP RNVV WT L+ GYVQ+
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSR 285
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
VF+EML + P+ TL+ L+AC + +L G ++H Y+IK I+ +T+ G
Sbjct: 286 CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGT 345
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
L LY KCG LE A+ F+R+ EKNV +WTA I+ G A+ +F MLS ++ P
Sbjct: 346 TLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSP 405
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVH-SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
NE T +VLS C +E G ++ SM + E ++ L+ ++G + EA+ L
Sbjct: 406 NEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
Query: 331 FKGMD-DASLVTWNAMIA 347
+ M + + V W A+
Sbjct: 466 IERMPMEPTNVVWGALFG 483
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 155/324 (47%), Gaps = 13/324 (4%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
+ PLL+ R + Q H HI+K G D G + A R FD
Sbjct: 107 FPPLLKAVFKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAE 165
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
++VV WT ++ G+V+N A F EM TG + T+ L A ++ ++ G
Sbjct: 166 DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRS 225
Query: 194 LHA-YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
+H Y+ + D +G++L +Y KC + A K F + +NV++WTA I+ S
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSR 285
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
KG+ +F EML ++ PNE TL+SVLS C + L G +VH K E N
Sbjct: 286 CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGT 345
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ LY+K GC+ EA ++F+ + + ++ TW AMI G A A +A +L
Sbjct: 346 TLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFA-----------AHGYARDAFDL 394
Query: 373 FSKLNCSGMKLDLFTFSSVLSVCG 396
F + S + + TF +VLS C
Sbjct: 395 FYTMLSSHVSPNEVTFMAVLSACA 418
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 161/315 (51%), Gaps = 19/315 (6%)
Query: 125 ARRAFDHMPRRNVVAWTTLML----GYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
ARR + ++ W +L+ G N R +F + M G PS +T L
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRL--SFLAYRHMRRNGVIPSRHTFPPLLK 112
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
A L+ + Q HA+I+K+ +D D V N+L S YS G +FA + F ++K+V++
Sbjct: 113 AVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVT 171
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
WTA I +G A + + FVEM + NE T+ SVL +++ + G VH +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 301 KLG-YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+ G + ++ + +SL+ +Y K C +AQ +F M ++VTW A+IAG+ QSR
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYV----QSR-- 285
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
C++ + + +F ++ S + + T SSVLS C + A +G ++H IK +
Sbjct: 286 ---CFD--KGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEIN 340
Query: 420 VIVGTSLINMYIKCA 434
GT+LI++Y+KC
Sbjct: 341 TTAGTTLIDLYVKCG 355
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 154/306 (50%), Gaps = 12/306 (3%)
Query: 93 VHGHIMKTGNH-EDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
VH H++K+ N+ E KCG+M RR F +RN ++WT LM GY N
Sbjct: 338 VHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANG 397
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
R A M G P + T+A L C L+++K G+++H Y +K + S+
Sbjct: 398 RFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT 457
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
+L +YSKCG E+ ++ F R++++NV +WTA I ++ + G+ +F ML +P
Sbjct: 458 SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRP 517
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+ T+ VL+ C +++ L+LG ++H K +ES V ++ +Y K G + A F
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
+ +TW A+I + E RD A+N F ++ G + FTF++V
Sbjct: 578 DAVAVKGSLTWTAIIEAYG-CNELFRD----------AINCFEQMVSRGFTPNTFTFTAV 626
Query: 392 LSVCGR 397
LS+C +
Sbjct: 627 LSICSQ 632
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 200/424 (47%), Gaps = 35/424 (8%)
Query: 24 PSSIPIDKGQNISLQKSHKFNTHLDP---SRYRGFQEALS----LAKEGTEEVDSSFYIP 76
PSS+P L + + H D +R + AL+ L + G V+++ +
Sbjct: 66 PSSLP--------LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIP-VNATTFSA 116
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL+ C+ ++S + VH HI G + CG+++DA++ FD N
Sbjct: 117 LLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSN 176
Query: 137 VVAWTTLMLGYVQNSRPKH--AFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
V +W L+ G V + + ++ F EM G ++ +L+ + +L+ G +
Sbjct: 177 VYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT 236
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
HA IK + + +L +Y KCG++ A + F I E++++ W A I+ + +
Sbjct: 237 HALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQ 296
Query: 255 KKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK-LGYESNLRVRN 312
+ L +F M+SE + PN LT++L +++ L+LG +VH+ K Y V +
Sbjct: 297 WEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHS 356
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT--EAL 370
L+ LY K G + + +F G + ++W A+++G+A NG +AL
Sbjct: 357 GLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAA-------------NGRFDQAL 403
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
+ G + D+ T ++VL VC + A QG++IH +K FL +V + TSL+ MY
Sbjct: 404 RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMY 463
Query: 431 IKCA 434
KC
Sbjct: 464 SKCG 467
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 13/325 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS-YPSMNTLA 176
KCG + ARR FD + R++V W ++ G N R A +F M+ YP+ L
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTS-VGNALCSLYSKCGRLEFALKAFKRIKE 235
L +K+LK G+++HA+++K + V + L LY KCG + + F K+
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+N ISWTA +S +G+ + LR V M E +P+ T+ +VL C E++ ++ G ++
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H K + N+ + SL+ +Y K G LF ++ ++ W AMI + + +
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
+ +F + S + D T VL+VC + A G+++H +K
Sbjct: 501 R-----------AGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE 549
Query: 416 FLSDVIVGTSLINMYIKCASVVCAS 440
F S V +I MY KC + A+
Sbjct: 550 FESIPFVSARIIKMYGKCGDLRSAN 574
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L C + R+ + +H + +K + KCG E R FD + +RN
Sbjct: 424 VLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRN 483
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V AWT ++ YV+N + VF ML + P T+ L C+ LK+LK G++LH
Sbjct: 484 VKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHG 543
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
+I+K + V + +Y KCG L A +F + K ++WTA I + G + +
Sbjct: 544 HILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRD 603
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
+ F +M+S PN +T T+VLS C + F++ + ++ ++ SL+
Sbjct: 604 AINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVI 663
Query: 317 LYLKR-GCIGEAQILFKGMDDASLVT 341
L R G + EAQ L +SL T
Sbjct: 664 ELLNRCGRVEEAQRLAVMSSSSSLQT 689
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 15/285 (5%)
Query: 156 AFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCS 215
A + D + G + T + L AC KSL G+Q+H +I ++ + + L
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 216 LYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK--KGLRIFVEMLSENMQPNE 273
+Y+ CG ++ A K F NV SW A + SGK + L F EM + N
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 274 YTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKG 333
Y+L++V L G + H++ K G +++ ++ SL+ +Y K G +G A+ +F
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 334 MDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLF-SKLNCSGMKLDLFTFSSVL 392
+ + +V W AMIAG A Q W EAL LF + ++ + + +++L
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQ--------W---EALGLFRTMISEEKIYPNSVILTTIL 323
Query: 393 SVCGRMVAFVQGEQIHAQTIKT-GFLSDVIVGTSLINMYIKCASV 436
V G + A G+++HA +K+ ++ V + LI++Y KC +
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDM 368
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 176/375 (46%), Gaps = 28/375 (7%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D ++ +++ C + + +HG + K G+ KC M+D ++ F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 130 DHMPRRNVVAWTTLMLGYV-----QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
M + V W ++ G + R A H DE PS T AI L C
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADE-----PKPSSVTFAIVLPLCVR 134
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRL-EFALKAFKRIKEKNVISWTA 243
L +G+ +H+YIIK ++ DT VGNAL S+Y+K G + A AF I +K+V+SW A
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQ---FLELGTQVHSMCT 300
I+ ++ R F ML E +PN T+ +VL C + G Q+HS
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 301 KLGY-ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+ + ++++ V NSL+ YL+ G I EA LF M LV+WN +IAG+A E
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCE----- 309
Query: 360 LYACWNGTEALNLFSKLNCSG-MKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF-L 417
W +A LF L G + D T S+L VC ++ G++IH+ ++ + L
Sbjct: 310 ----W--FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 418 SDVIVGTSLINMYIK 432
D VG +LI+ Y +
Sbjct: 364 EDTSVGNALISFYAR 378
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 180/347 (51%), Gaps = 31/347 (8%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLA 176
+ G +E+A F M +++V+W ++ GY N AF +F ++H G P T+
Sbjct: 275 RVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTII 334
Query: 177 IALNACTSLKSLKSGEQLHAYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
L C L L SG+++H+YI+++ ++ DTSVGNAL S Y++ G A AF +
Sbjct: 335 SILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST 394
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
K++ISW A + + DS K + L + +L+E + + T+ S+L C +Q + +V
Sbjct: 395 KDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV 454
Query: 296 HSMCTKLGY---ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD-ASLVTWNAMIAGH-- 349
H K G E ++ N+LL Y K G + A +F G+ + +LV++N++++G+
Sbjct: 455 HGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVN 514
Query: 350 ------AKMM--EQSRDNL---------YA---CWNGTEALNLFSKLNCSGMKLDLFTFS 389
A+M+ E S +L YA C N EA+ +F ++ GM+ + T
Sbjct: 515 SGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPN--EAIGVFREIQARGMRPNTVTIM 572
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
++L VC ++ + Q H I+ G L D+ + +L+++Y KC S+
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGG-LGDIRLKGTLLDVYAKCGSL 618
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTG---NHEDXXXXXXXXXXXXKCGNMEDA 125
+DS + LL+ CI+ + + VHG+ +K G + E+ KCGN+E A
Sbjct: 430 LDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYA 489
Query: 126 RRAFDHMP-RRNVVAWTTLMLGYVQNSR-------------------------------P 153
+ F + RR +V++ +L+ GYV + P
Sbjct: 490 HKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCP 549
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
A VF E+ G P+ T+ L C L SL Q H YII+ + D + L
Sbjct: 550 NEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTL 608
Query: 214 CSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE 273
+Y+KCG L+ A F+ ++++ +TA ++ G+ K+ L I+ M N++P+
Sbjct: 609 LDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDH 668
Query: 274 YTLTSVLSQCCEIQFLELGTQVH 296
+T++L+ CC ++ G Q++
Sbjct: 669 VFITTMLTACCHAGLIQDGLQIY 691
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 172/401 (42%), Gaps = 53/401 (13%)
Query: 52 YRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGN-HEDXXXXX 110
++ FQ +L +G DS I +L C + + +H +I++ ED
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
+ G+ A AF M +++++W ++ + + PK +
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADS--PKQFQFLNLLHHLLNEAI 428
Query: 171 SMNTLAI--ALNACTSLKSLKSGEQLHAYIIK---YHIDFDTSVGNALCSLYSKCGRLEF 225
+++++ I L C +++ + +++H Y +K H + + +GNAL Y+KCG +E+
Sbjct: 429 TLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEY 488
Query: 226 ALKAFKRIKEK--------------------------------NVISWTAAISSCGDSGK 253
A K F + E+ ++ +W+ + +S
Sbjct: 489 AHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCC 548
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
+ + +F E+ + M+PN T+ ++L C ++ L L Q H + G ++R++ +
Sbjct: 549 PNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGT 607
Query: 314 LLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLF 373
LL +Y K G + A +F+ LV + AM+AG+A R G EAL ++
Sbjct: 608 LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAV---HGR--------GKEALMIY 656
Query: 374 SKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
S + S +K D +++L+ C G QI+ +I+T
Sbjct: 657 SHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY-DSIRT 696
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL C S + HG+I++ G D KCG+++ A F RR+
Sbjct: 574 LLPVCAQLASLHLVRQCHGYIIR-GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRD 632
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
+V +T ++ GY + R K A ++ M + P + L AC ++ G Q++
Sbjct: 633 LVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYD 692
Query: 197 YIIKYHIDFDTSVGNALCS--LYSKCGRLEFALKAFKRIK-EKNVISWTAAISSC 248
I H ++ C+ L ++ GRL+ A ++ E N W + +C
Sbjct: 693 SIRTVH-GMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRAC 746
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 167/349 (47%), Gaps = 14/349 (4%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
++VH H++K+ D KC +++ A + F+ MP R+ W ++ G+ Q+
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
AF +F EM P T+ + + + KSLK E +HA I+ +D +V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 211 NALCSLYSKCGRLEFALKAFKRIK--EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
N S Y KCG L+ A F+ I ++ V+SW + + G+A ++ ML E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
+P+ T ++ + C + L G +HS LG + ++ N+ + +Y K A+
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
+LF M + V+W MI+G+A+ + EAL LF + SG K DL T
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMD-----------EALALFHAMIKSGEKPDLVTL 360
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD-VIVGTSLINMYIKCASV 436
S++S CG+ + G+ I A+ G D V++ +LI+MY KC S+
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 13/309 (4%)
Query: 126 RRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL 185
RR + +V AW + V + P + +F EM G P+ T AC L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
+ E +HA++IK D VG A ++ KC +++A K F+R+ E++ +W A +
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
S SG K +F EM + P+ T+ +++ + L+L +H++ +LG +
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMD--DASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ V N+ + Y K G + A+++F+ +D D ++V+WN+M ++ E
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE--------- 236
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
+A L+ + K DL TF ++ + C QG IH+ I G D+
Sbjct: 237 --AFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI 294
Query: 424 TSLINMYIK 432
+ I+MY K
Sbjct: 295 NTFISMYSK 303
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 162/374 (43%), Gaps = 42/374 (11%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D S +I L C + + + +++H H + G +D K + AR F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D M R V+WT ++ GY + A +F M+ +G P + TL ++ C SL+
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 190 SGEQLHAYIIKYHIDFD-TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
+G+ + A Y D + NAL +YSKCG + A F EK V++WT I+
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESN 307
+G + L++F +M+ + +PN T +VL C LE G + H M
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 494
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMD---DASLVTWNAM-----IAGHAKMMEQSRD- 358
L + ++ L ++G + EA L + M DA + W A+ I + K+ EQ+ +
Sbjct: 495 LDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGI--WGALLNACKIHRNVKIAEQAAES 552
Query: 359 ----------------NLYAC---WNGTEALNLFSKLNCSGMK---LDLFTFSSVLSVCG 396
N+YA W+G F+++ S MK + + SV+ V G
Sbjct: 553 LFNLEPQMAAPYVEMANIYAAAGMWDG------FARIR-SIMKQRNIKKYPGESVIQVNG 605
Query: 397 RMVAFVQGEQIHAQ 410
+ +F GE H +
Sbjct: 606 KNHSFTVGEHGHVE 619
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
E+L LF ++ G + + FTF V C R+ E +HA IK+ F SDV VGT+
Sbjct: 34 VESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 427 INMYIKCASV 436
++M++KC SV
Sbjct: 94 VDMFVKCNSV 103
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 12/361 (3%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKT-GNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR 135
LL+ I S ++VH I+KT + K + E AR P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
NVV+WT+L+ G QN A F EM G P+ T A A SL+ +G+Q+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
A +K D VG + +Y K + A K F I E+N+ +W A IS+ G+ +
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
+ + F+E + PN T + L+ C + L LG Q+H + + G+++++ V N L+
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 316 YLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSK 375
Y K I ++I+F M + V+W +++A + + E + ++ L+ +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV-----------LYLR 300
Query: 376 LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
++ F SSVLS C M G IHA +K + VG++L++MY KC
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 436 V 436
+
Sbjct: 361 I 361
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 165/354 (46%), Gaps = 16/354 (4%)
Query: 57 EALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDT-QIVHGHIMKTGNHEDXXXXXXXXXX 115
E + +EG V + F P + + T + +H +K G D
Sbjct: 95 EFFEMRREGV--VPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDM 152
Query: 116 XXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
K +DAR+ FD +P RN+ W + V + RP+ A F E +P+ T
Sbjct: 153 YCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITF 212
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
LNAC+ L G QLH +++ D D SV N L Y KC ++ + F +
Sbjct: 213 CAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT 272
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
KN +SW + +++ + + +K +++ + ++ +++ ++SVLS C + LELG +
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI 332
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H+ K E + V ++L+ +Y K GCI +++ F M + +LVT N++I G+A Q
Sbjct: 333 HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA---HQ 389
Query: 356 SRDNLYACWNGTEALNLFSKL--NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+ ++ AL LF ++ G + TF S+LS C R A G +I
Sbjct: 390 GQVDM--------ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 18/270 (6%)
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS----VGNALCSLYSKCGRLEFA 226
S + L + L S S++ G +HA I+K D+ + N L ++YSK E A
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVK---TLDSPPPPFLANYLINMYSKLDHPESA 61
Query: 227 LKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI 286
+ +NV+SWT+ IS +G L F EM E + PN++T +
Sbjct: 62 RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL 121
Query: 287 QFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMI 346
+ G Q+H++ K G ++ V S +Y K +A+ LF + + +L TWNA I
Sbjct: 122 RLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFI 181
Query: 347 AGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
+ N EA+ F + + TF + L+ C + G Q
Sbjct: 182 S-----------NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 230
Query: 407 IHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+H +++GF +DV V LI+ Y KC +
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
+S + L C D + +HG ++++G D KC + + F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVF----DEMLHTGSYPSMNTLAIALNACTSL 185
M +N V+W +L+ YVQN + A ++ +++ T + ++ L+AC +
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF----MISSVLSACAGM 323
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
L+ G +HA+ +K ++ VG+AL +Y KCG +E + +AF + EKN+++ + I
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 246 SSCGDSGKAKKGLRIFVEMLSENM--QPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKL 302
G+ L +F EM PN T S+LS C +E G ++ SM +
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAM 345
G E + ++ + + G + A K M ++ W A+
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 22/379 (5%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L C R+ + +HG I+K G +D +CG ++ AR+ FD M RNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSLKSGEQLHA 196
V+WT+++ GY + K A +F M+ P+ T+ ++AC L+ L++GE+++A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
+I I+ + + +AL +Y KC ++ A + F N+ A S+ G ++
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
L +F M+ ++P+ ++ S +S C +++ + G H + G+ES + N+L+
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA---------KMMEQSRDNLYACWNGT 367
+Y+K A +F M + ++VTWN+++AG+ + E + WN
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 368 -----------EALNLFSKLNC-SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
EA+ +F + G+ D T S+ S CG + A + I+ K G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 416 FLSDVIVGTSLINMYIKCA 434
DV +GT+L++M+ +C
Sbjct: 501 IQLDVRLGTTLVDMFSRCG 519
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 170/361 (47%), Gaps = 19/361 (5%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED---ARRAFDHMPR 134
L+ C ++ + ++ H + K G D + G E A+ F++
Sbjct: 39 LKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 135 RNV-VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+ +L+ GY + A +F M+++G P T L+AC ++ +G Q
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H I+K D V N+L Y++CG L+ A K F + E+NV+SWT+ I
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 254 AKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
AK + +F M+ E + PN T+ V+S C +++ LE G +V++ G E N + +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ +Y+K I A+ LF ++L NAM + + R L EAL +
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV------RQGLT-----REALGV 324
Query: 373 FSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
F+ + SG++ D + S +S C ++ + G+ H ++ GF S + +LI+MY+K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 433 C 433
C
Sbjct: 385 C 385
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 153/381 (40%), Gaps = 45/381 (11%)
Query: 67 EEV--DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED 124
EEV +S + ++ C + V+ I +G + KC ++
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
A+R FD N+ + YV+ + A VF+ M+ +G P ++ A+++C+
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK---------- 234
L+++ G+ H Y+++ + ++ NAL +Y KC R + A + F R+
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 235 ---------------------EKNVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPN 272
EKN++SW IS ++ + +F M S E + +
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
T+ S+ S C + L+L ++ K G + ++R+ +L+ ++ + G A +F
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ + + W A I A N A+ LF + G+K D F L
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAG-----------NAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 393 SVCGRMVAFVQGEQIHAQTIK 413
+ C QG++I +K
Sbjct: 579 TACSHGGLVQQGKEIFYSMLK 599
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 149/309 (48%), Gaps = 29/309 (9%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
NV+ + ++L ++P + ++ T + PS +L C ++ LK H
Sbjct: 6 NVLHLSPMVLATTTTTKPS----LLNQSKCTKATPS------SLKNCKTIDELK---MFH 52
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCG---RLEFALKAFKRIKEKNV-ISWTAAISSCGDS 251
+ K +D D S L + + G L FA + F+ + + + I S
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
G + + +F+ M++ + P++YT LS C + + G Q+H + K+GY +L V+
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQ 172
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
NSL++ Y + G + A+ +F M + ++V+W +MI G+A+ RD +A++
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR-----RDF------AKDAVD 221
Query: 372 LFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
LF ++ + + T V+S C ++ GE+++A +G + ++ ++L++MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 431 IKCASVVCA 439
+KC ++ A
Sbjct: 282 MKCNAIDVA 290
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 3/232 (1%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTLAIA 178
G ++ A F+ MP +N+V+W T++ G VQ S + A VF M G T+
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
+AC L +L + ++ YI K I D +G L ++S+CG E A+ F + ++V
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+WTAAI + +G A++ + +F +M+ + ++P+ L+ C ++ G ++
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 299 CTKLGYESNLRVRNSLLYLYLKR-GCIGEAQILFKGMD-DASLVTWNAMIAG 348
KL S V + L R G + EA L + M + + V WN+++A
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
Query: 55 FQEALSL-----AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXX 109
F+EA+ + ++EG D + + C + + ++ +I K G D
Sbjct: 450 FEEAIEVFCSMQSQEGVN-ADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 110 XXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
+CG+ E A F+ + R+V AWT + + A +FD+M+ G
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGNALCSLYSKCGRLEFALK 228
P AL AC+ ++ G+++ ++K H + + + L + G LE A++
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 229 AFKRIK-EKNVISWTAAISSCGDSGKAK 255
+ + E N + W + +++C G +
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVE 656
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 22/379 (5%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L C R+ + +HG I+K G +D +CG ++ AR+ FD M RNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSLKSGEQLHA 196
V+WT+++ GY + K A +F M+ P+ T+ ++AC L+ L++GE+++A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
+I I+ + + +AL +Y KC ++ A + F N+ A S+ G ++
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
L +F M+ ++P+ ++ S +S C +++ + G H + G+ES + N+L+
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA---------KMMEQSRDNLYACWNGT 367
+Y+K A +F M + ++VTWN+++AG+ + E + WN
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 368 -----------EALNLFSKLNC-SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
EA+ +F + G+ D T S+ S CG + A + I+ K G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 416 FLSDVIVGTSLINMYIKCA 434
DV +GT+L++M+ +C
Sbjct: 501 IQLDVRLGTTLVDMFSRCG 519
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 170/361 (47%), Gaps = 19/361 (5%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED---ARRAFDHMPR 134
L+ C ++ + ++ H + K G D + G E A+ F++
Sbjct: 39 LKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 135 RNV-VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+ +L+ GY + A +F M+++G P T L+AC ++ +G Q
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H I+K D V N+L Y++CG L+ A K F + E+NV+SWT+ I
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 254 AKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
AK + +F M+ E + PN T+ V+S C +++ LE G +V++ G E N + +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ +Y+K I A+ LF ++L NAM + + R L EAL +
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV------RQGLT-----REALGV 324
Query: 373 FSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
F+ + SG++ D + S +S C ++ + G+ H ++ GF S + +LI+MY+K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 433 C 433
C
Sbjct: 385 C 385
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 153/381 (40%), Gaps = 45/381 (11%)
Query: 67 EEV--DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED 124
EEV +S + ++ C + V+ I +G + KC ++
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
A+R FD N+ + YV+ + A VF+ M+ +G P ++ A+++C+
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK---------- 234
L+++ G+ H Y+++ + ++ NAL +Y KC R + A + F R+
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 235 ---------------------EKNVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPN 272
EKN++SW IS ++ + +F M S E + +
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
T+ S+ S C + L+L ++ K G + ++R+ +L+ ++ + G A +F
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ + + W A I A N A+ LF + G+K D F L
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAG-----------NAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 393 SVCGRMVAFVQGEQIHAQTIK 413
+ C QG++I +K
Sbjct: 579 TACSHGGLVQQGKEIFYSMLK 599
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 149/309 (48%), Gaps = 29/309 (9%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
NV+ + ++L ++P + ++ T + PS +L C ++ LK H
Sbjct: 6 NVLHLSPMVLATTTTTKPS----LLNQSKCTKATPS------SLKNCKTIDELK---MFH 52
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCG---RLEFALKAFKRIKEKNV-ISWTAAISSCGDS 251
+ K +D D S L + + G L FA + F+ + + + I S
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
G + + +F+ M++ + P++YT LS C + + G Q+H + K+GY +L V+
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQ 172
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
NSL++ Y + G + A+ +F M + ++V+W +MI G+A+ RD +A++
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR-----RDF------AKDAVD 221
Query: 372 LFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
LF ++ + + T V+S C ++ GE+++A +G + ++ ++L++MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 431 IKCASVVCA 439
+KC ++ A
Sbjct: 282 MKCNAIDVA 290
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 3/232 (1%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTLAIA 178
G ++ A F+ MP +N+V+W T++ G VQ S + A VF M G T+
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
+AC L +L + ++ YI K I D +G L ++S+CG E A+ F + ++V
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+WTAAI + +G A++ + +F +M+ + ++P+ L+ C ++ G ++
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 299 CTKLGYESNLRVRNSLLYLYLKR-GCIGEAQILFKGMD-DASLVTWNAMIAG 348
KL S V + L R G + EA L + M + + V WN+++A
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
Query: 55 FQEALSL-----AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXX 109
F+EA+ + ++EG D + + C + + ++ +I K G D
Sbjct: 450 FEEAIEVFCSMQSQEGVN-ADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 110 XXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
+CG+ E A F+ + R+V AWT + + A +FD+M+ G
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGNALCSLYSKCGRLEFALK 228
P AL AC+ ++ G+++ ++K H + + + L + G LE A++
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 229 AFKRIK-EKNVISWTAAISSCGDSGKAK 255
+ + E N + W + +++C G +
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVE 656
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 181/399 (45%), Gaps = 25/399 (6%)
Query: 54 GF-QEALSLAKEGTEEVDSSFYIP-------LLQQCIDKRSFSDTQIVHGHIMKTGNHED 105
GF +E+ L E EE ++P +L C +R + VHG +K ++
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 106 XXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH 165
KCG + +A+ F +NVV+W T++ G+ F V +ML
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 166 TGSYPSMNTLAI--ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRL 223
G + + I A+ C L S ++LH Y +K ++ V NA + Y+KCG L
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 224 EFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
+A + F I+ K V SW A I S + L ++M + P+ +T+ S+LS C
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 284 CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWN 343
+++ L LG +VH + E +L V S+L LY+ G + Q LF M+D SLV+WN
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWN 566
Query: 344 AMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAF 401
+I G+ + NG AL +F ++ G++L + V C + +
Sbjct: 567 TVITGYLQ-------------NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 402 VQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
G + HA +K D + SLI+MY K S+ +S
Sbjct: 614 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 170/350 (48%), Gaps = 17/350 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VHG ++KTG ED G + DA + FD MP RN+V+W +++ + N
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 153 PKHAFHVFDEMLH---TGSY-PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
+ +F + EM+ G++ P + TL L C + + G+ +H + +K +D +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS-- 266
+ NAL +YSKCG + A FK KNV+SW + G + +ML+
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 267 ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
E+++ +E T+ + + C FL ++H K + N V N+ + Y K G +
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
AQ +F G+ ++ +WNA+I GHA QS D +L+ ++ SG+ D F
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHA----QSNDPRL-------SLDAHLQMKISGLLPDSF 497
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
T S+LS C ++ + G+++H I+ D+ V S++++YI C +
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 157/325 (48%), Gaps = 18/325 (5%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAI 177
CG+ +D+R FD + +N+ W ++ Y +N F EM+ T P T
Sbjct: 133 CGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPC 192
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+ AC + + G +H ++K + D VGNAL S Y G + AL+ F + E+N
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSEN----MQPNEYTLTSVLSQCCEIQFLELGT 293
++SW + I D+G +++ + EM+ EN P+ TL +VL C + + LG
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 294 QVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMM 353
VH KL + L + N+L+ +Y K GCI AQ++FK ++ ++V+WN M+ G +
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSG--MKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
+ +GT ++ ++ G +K D T + + VC +++H +
Sbjct: 373 DT---------HGT--FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 412 IKTGFLSDVIVGTSLINMYIKCASV 436
+K F+ + +V + + Y KC S+
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSL 446
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 142/278 (51%), Gaps = 11/278 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG++ A+R F + + V +W L+ G+ Q++ P+ + +M +G P T+
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC+ LKSL+ G+++H +II+ ++ D V ++ SLY CG L F +++K+
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
++SW I+ +G + L +F +M+ +Q ++ V C + L LG + H+
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 621
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
K E + + SL+ +Y K G I ++ +F G+ + S +WNAMI G+
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG------- 674
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
++ EA+ LF ++ +G D TF VL+ C
Sbjct: 675 --IHGL--AKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 3/281 (1%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
DS LL C +S + VHG I++ D CG + + F
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D M +++V+W T++ GY+QN P A VF +M+ G ++ AC+ L SL+
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G + HAY +K+ ++ D + +L +Y+K G + + K F +KEK+ SW A I G
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESNL 308
G AK+ +++F EM P++ T VL+ C + G + + M + G + NL
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 309 RVRNSLLYLYLKRGCIGEA-QILFKGM-DDASLVTWNAMIA 347
+ ++ + + G + +A +++ + M ++A + W ++++
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 17/272 (6%)
Query: 174 TLAIALNACTSLKSLKSGEQLHAYII-KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
L + L A K ++ G ++H + + D + + ++Y+ CG + + F
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLEL 291
++ KN+ W A ISS + + L F+EM+S ++ P+ +T V+ C + + +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G VH + K G ++ V N+L+ Y G + +A LF M + +LV+WN+MI +
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS- 264
Query: 352 MMEQSRDNLYACWNGTEALNLFSKL---NCSGMKL-DLFTFSSVLSVCGRMVAFVQGEQI 407
DN ++ E+ L ++ N G + D+ T +VL VC R G+ +
Sbjct: 265 ------DNGFS----EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314
Query: 408 HAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
H +K ++++ +L++MY KC + A
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 190/377 (50%), Gaps = 54/377 (14%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G+M+ FD +P+R+ V+WTT+++GY + A V +M+ G P+ TL
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKC----------------- 220
L + + + +++G+++H++I+K + + SV N+L ++Y+KC
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 221 --------------GRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
G+++ A+ F+++ E+++++W + IS G + L IF +ML
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 267 EN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG 325
++ + P+ +TL SVLS C ++ L +G Q+HS G++ + V N+L+ +Y + G +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 326 EAQILF--KGMDDASLVTWNAMIAGHAKM--MEQS-------RDNLYACWNGT------- 367
A+ L +G D + + A++ G+ K+ M Q+ +D W
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 368 ----EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
EA+NLF + G + + +T +++LSV + + G+QIH +K+G + V V
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 424 TSLINMYIKCASVVCAS 440
+LI MY K ++ AS
Sbjct: 452 NALITMYAKAGNITSAS 468
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 139/273 (50%), Gaps = 22/273 (8%)
Query: 189 KSGEQLHAYIIKYHIDFDTSVG-NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
K+G LHA + + T+ N + S YSK G ++ + F ++ +++ +SWT I
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
+ G+ K +R+ +M+ E ++P ++TLT+VL+ + +E G +VHS KLG N
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM---------MEQSRD 358
+ V NSLL +Y K G A+ +F M + +WNAMIA H ++ EQ +
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 359 NLYACWNGT-----------EALNLFSK-LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
WN AL++FSK L S + D FT +SVLS C + G+Q
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 407 IHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
IH+ + TGF IV +LI+MY +C V A
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 144/329 (43%), Gaps = 56/329 (17%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLA 176
+ G M+ A F+ M R++V W +++ G+ Q A +F +ML P TLA
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLA 283
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALK-------- 228
L+AC +L+ L G+Q+H++I+ D V NAL S+YS+CG +E A +
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 229 -------------------------AFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVE 263
F +K+++V++WTA I G + + +F
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
M+ +PN YTL ++LS + L G Q+H K G ++ V N+L+ +Y K G
Sbjct: 404 MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN 463
Query: 324 IGEAQILFKGMD-DASLVTWNAMIA-----GHAKMMEQSRDNLYACWNGTEALNLFSKLN 377
I A F + + V+W +MI GHA+ EAL LF +
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE----------------EALELFETML 507
Query: 378 CSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
G++ D T+ V S C QG Q
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G+M A+ F + R+VVAWT +++GY Q+ A ++F M+ G P+ TLA
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EK 236
L+ +SL SL G+Q+H +K + SV NAL ++Y+K G + A +AF I+ E+
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+ +SWT+ I + G A++ L +F ML E ++P+ T V S C + G Q
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 297 SMCTKLG-YESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
M + L ++ L+ + G + EAQ + M + +VTW ++++
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 172/370 (46%), Gaps = 22/370 (5%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG---NMEDARRAFD 130
Y P+L Q + RS + +HG ++K+ + C N+ AR F+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS 190
+ +V W +++ GY + P A + EML G P T L AC+ L+ ++
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
G +H +++K + + V L +Y CG + + L+ F+ I + NV++W + IS +
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES---- 306
+ + + F EM S ++ NE + +L C + + G H LG++
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS 245
Query: 307 ----NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
N+ + SL+ +Y K G + A+ LF GM + +LV+WN++I G++ Q+ D
Sbjct: 246 KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS----QNGD---- 297
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIV 422
EAL +F + G+ D TF SV+ G+ IHA KTGF+ D +
Sbjct: 298 ---AEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 423 GTSLINMYIK 432
+L+NMY K
Sbjct: 355 VCALVNMYAK 364
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 21/348 (6%)
Query: 73 FYIP-LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH 131
F P +L+ C R VHG ++KTG + CG + R F+
Sbjct: 108 FTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFED 167
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
+P+ NVVAW +L+ G+V N+R A F EM G + + L AC K + +G
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG 227
Query: 192 EQLHAYI--------IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
+ H ++ + + F+ + +L +Y+KCG L A F + E+ ++SW +
Sbjct: 228 KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNS 287
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I+ +G A++ L +F++ML + P++ T SV+ +LG +H+ +K G
Sbjct: 288 IITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTG 347
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ + + +L+ +Y K G A+ F+ ++ + W +I G L +
Sbjct: 348 FVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG-----------LASH 396
Query: 364 WNGTEALNLFSKLNCSG-MKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
+G EAL++F ++ G D T+ VL C + +G++ A+
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG++ AR FD MP R +V+W +++ GY QN + A +F +ML G P T
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+ A + G+ +HAY+ K D ++ AL ++Y+K G E A KAF+ +++K+
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD 382
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
I+WT I G + L IF M + N P+ T VL C I +E G +
Sbjct: 383 TIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYF 442
Query: 297 SMCTKL-GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+ L G E + ++ + + G EA+ L K M ++ W A++ G
Sbjct: 443 AEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 25/272 (9%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGR---LEFALKAFKRIKE 235
L C SL L QLH +IK + + + L + C L +A F+ I
Sbjct: 13 LENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+V W + I +S K L + EML + P+ +T VL C ++ ++ G+ V
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H K G+E N+ V LL++Y+ G + +F+ + ++V W ++I+G
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN---- 185
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
+N + ++A+ F ++ +G+K + +L CGR V G+ H G
Sbjct: 186 --NNRF-----SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 416 FLS--------DVIVGTSLINMYIKCASVVCA 439
F +VI+ TSLI+MY KC + A
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTA 270
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
Q +H ++ KTG +D K G+ E A++AF+ + +++ +AWT +++G +
Sbjct: 337 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 151 SRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
A +F M G + P T L AC+ + ++ G++ A + H + +V
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH-GLEPTV 455
Query: 210 GNALC--SLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSC 248
+ C + S+ GR E A + K + K NV W A ++ C
Sbjct: 456 EHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 497
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 172/347 (49%), Gaps = 11/347 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG ++ +G + KCG +DA + F M R + V W ++ GYVQ+
Sbjct: 261 LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ + F EM+ +G P T + L + + ++L+ +Q+H YI+++ I D + +A
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L Y KC + A F + +V+ +TA IS +G L +F ++ + PN
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
E TL S+L + L+LG ++H K G+++ + +++ +Y K G + A +F+
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
+ +V+WN+MI A QS N + A+++F ++ SG+ D + S+ L
Sbjct: 501 RLSKRDIVSWNSMITRCA----QSD-------NPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
S C + + G+ IH IK SDV ++LI+MY KC ++ A
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 182/421 (43%), Gaps = 41/421 (9%)
Query: 20 KKYPPSSIPIDKGQNISLQKSHKFNTHLDPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQ 79
K++ P+ P K ++ L+ S +F P R LSL LLQ
Sbjct: 8 KRFAPAIAPYKK--SLPLRNSSRFLEETIPRR-------LSL---------------LLQ 43
Query: 80 QCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP--RRNV 137
C + + VH ++ D CG+ D + F + R ++
Sbjct: 44 ACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSI 103
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
W +++ +V+N A + +ML G P ++T + AC +LK+ K + L
Sbjct: 104 RPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDT 163
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
+ +D + V ++L Y + G+++ K F R+ +K+ + W ++ G
Sbjct: 164 VSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYL 317
++ F M + + PN T VLS C ++LG Q+H + G + ++NSLL +
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 318 YLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--MMEQSRDNLYACWNGTEALNLFSK 375
Y K G +A LF+ M A VTWN MI+G+ + +ME E+L F +
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME-------------ESLTFFYE 330
Query: 376 LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
+ SG+ D TFSS+L + +QIH ++ D+ + ++LI+ Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 436 V 436
V
Sbjct: 391 V 391
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 167/365 (45%), Gaps = 11/365 (3%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D S + L++ C+ ++F + + G + + G ++ + F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D + +++ V W ++ GY + F M P+ T L+ C S +
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID 256
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G QLH ++ +DF+ S+ N+L S+YSKCGR + A K F+ + + ++W IS
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
SG ++ L F EM+S + P+ T +S+L + + LE Q+H + ++
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
+ ++L+ Y K + AQ +F + +V + AMI+G+ + LY ++
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL------HNGLY-----IDS 425
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
L +F L + + T S+L V G ++A G ++H IK GF + +G ++I+M
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 430 YIKCA 434
Y KC
Sbjct: 486 YAKCG 490
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 2/244 (0%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG I+K G KCG M A F+ + +R++V+W +++ Q+
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
P A +F +M +G +++ AL+AC +L S G+ +H ++IK+ + D +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQP 271
L +Y+KCG L+ A+ FK +KEKN++SW + I++CG+ GK K L +F EM+ ++ ++P
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642
Query: 272 NEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
++ T ++S CC + ++ G + SM G + ++ L+ + G + EA
Sbjct: 643 DQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYET 702
Query: 331 FKGM 334
K M
Sbjct: 703 VKSM 706
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 146/307 (47%), Gaps = 18/307 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +IM+ D KC + A+ F +VV +T ++ GY+ N
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGL 421
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
+ +F ++ P+ TL L L +LK G +LH +IIK D ++G A
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+ +Y+KCGR+ A + F+R+ +++++SW + I+ C S + IF +M + +
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
++++ LS C + G +H K S++ ++L+ +Y K G + A +FK
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 333 GMDDASLVTWNAMIAG---HAKMMEQSRDNLYACWNGTEALNLFSKL-NCSGMKLDLFTF 388
M + ++V+WN++IA H K+ ++L LF ++ SG++ D TF
Sbjct: 602 TMKEKNIVSWNSIIAACGNHGKL--------------KDSLCLFHEMVEKSGIRPDQITF 647
Query: 389 SSVLSVC 395
++S C
Sbjct: 648 LEIISSC 654
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 3/174 (1%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L C + S S + +HG ++K D KCGN++ A F M +N+
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLH-TGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V+W +++ + + K + +F EM+ +G P T +++C + + G +
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 197 YIIK-YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSC 248
+ + Y I + L+ + GRL A + K + + W + +C
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGAC 722
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 27/387 (6%)
Query: 63 KEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNM 122
K +VD + LL+ + F + VHG ++K G + KC +
Sbjct: 93 KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 123 EDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM-------LHTGSYPSMNTL 175
EDA AF + N V+W L+ G+VQ K AF + M + G++ + TL
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 212
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK- 234
C LK Q+HA ++K + + ++ NA+ S Y+ CG + A + F +
Sbjct: 213 LDDPMFCNLLK------QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
K++ISW + I+ + +F++M ++ + YT T +LS C + G
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLK--RGCIGEAQILFKGMDDASLVTWNAMIAGHAKM 352
+H M K G E N+L+ +Y++ G + +A LF+ + L++WN++I G A+
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 353 MEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
S D A+ FS L S +K+D + FS++L C + G+QIHA
Sbjct: 387 -GLSED----------AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 413 KTGFLSDVIVGTSLINMYIKCASVVCA 439
K+GF+S+ V +SLI MY KC + A
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESA 462
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
+D+ + PLL D + + VH ++K G + CG++ DA+R
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 129 FDHMP-RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
FD + +++++W +++ G+ ++ + AF +F +M + T L+AC+ +
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSK--CGRLEFALKAFKRIKEKNVISWTAAI 245
G+ LH +IK ++ TS NAL S+Y + G +E AL F+ +K K++ISW + I
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
+ G ++ ++ F + S ++ ++Y +++L C ++ L+LG Q+H++ TK G+
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV 440
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA-SLVTWNAMIAGHAKMMEQSRDNLYACW 364
SN V +SL+ +Y K G I A+ F+ + S V WNAMI G+A+
Sbjct: 441 SNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGL---------- 490
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
G +L+LFS++ +KLD TF+++L+ C
Sbjct: 491 -GQVSLDLFSQMCNQNVKLDHVTFTAILTAC 520
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 168/349 (48%), Gaps = 15/349 (4%)
Query: 87 FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLG 146
F + H + +K G+ D K G + A FD MP+R+ V+W T++ G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 147 YVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFD 206
Y + + A+ +F M +GS + + L S+K GEQ+H +IK + +
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 207 TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM-L 265
VG++L +Y+KC R+E A +AFK I E N +SW A I+ K + M +
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 266 SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG 325
+ + T +L+ + F L QVH+ KLG + + + N+++ Y G +
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 326 EAQILFKGMDDA-SLVTWNAMIAGHAK-MMEQSRDNLYACWNGTEALNLFSKLNCSGMKL 383
+A+ +F G+ + L++WN+MIAG +K +++S A LF ++ ++
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKES------------AFELFIQMQRHWVET 303
Query: 384 DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
D++T++ +LS C + G+ +H IK G +LI+MYI+
Sbjct: 304 DIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 352
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 10/242 (4%)
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H Y IK D V N + Y K G L +A F + +++ +SW IS GK
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSL 314
+ +F M + Y+ + +L ++ +LG QVH + K GYE N+ V +SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 315 LYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFS 374
+ +Y K + +A FK + + + V+WNA+IAG Q RD A W L L
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFV----QVRDIKTAFW----LLGLME 194
Query: 375 KLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ + +D TF+ +L++ + +Q+HA+ +K G ++ + ++I+ Y C
Sbjct: 195 MK--AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 435 SV 436
SV
Sbjct: 253 SV 254
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 159/302 (52%), Gaps = 22/302 (7%)
Query: 159 VFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYS 218
+F E+ G YP TL + L + L+ + GE++H Y +K ++FD+ V N+L +Y+
Sbjct: 33 LFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYA 92
Query: 219 KCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTLT 277
G++E K F + +++V+SW ISS +G+ + + +F M E N++ +E T+
Sbjct: 93 SLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 278 SVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA 337
S LS C ++ LE+G +++ +E ++R+ N+L+ ++ K GC+ +A+ +F M D
Sbjct: 153 STLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 211
Query: 338 SLVTWNAMIAGHAK---------MMEQSRDNLYACW----NG-------TEALNLFSKLN 377
++ W +M+ G+ + E+S W NG EAL LF +
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 378 CSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVV 437
+G++ D F S+L+ C + A QG+ IH + D +VGT+L++MY KC +
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIE 331
Query: 438 CA 439
A
Sbjct: 332 TA 333
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 178/395 (45%), Gaps = 48/395 (12%)
Query: 53 RGFQEALSLAKE--GTEEVDSSFYIPLLQQCIDK-RSFSDTQIVHGHIMKTGNHEDXXXX 109
+ F + L+L E G +F +P++ + I + R + + VHG+ +K G D
Sbjct: 25 KSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVS 84
Query: 110 XXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
G +E + FD MP+R+VV+W L+ YV N R + A VF M +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 170 P-SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALK 228
T+ L+AC++LK+L+ GE+++ +++ + +GNAL ++ KCG L+ A
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARA 203
Query: 229 AFKRIKEKNVISWTAAISSCGDSGKA-------------------------------KKG 257
F +++KNV WT+ + +G+ +
Sbjct: 204 VFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYL 317
L +F M + ++P+ + L S+L+ C + LE G +H + + V +L+ +
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 318 YLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLN 377
Y K GCI A +F + + +W ++I G A R AL+L+ ++
Sbjct: 324 YAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR-----------ALDLYYEME 372
Query: 378 CSGMKLDLFTFSSVLSVCGRMVAFVQGEQI-HAQT 411
G++LD TF +VL+ C +G +I H+ T
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMT 407
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 116/225 (51%), Gaps = 4/225 (1%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G +++AR F+ P ++VV WT +M GYVQ +R A +F M G P L L
Sbjct: 227 GRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLL 286
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
C +L+ G+ +H YI + + D VG AL +Y+KCG +E AL+ F IKE++
Sbjct: 287 TGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTA 346
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSM 298
SWT+ I +G + + L ++ EM + ++ + T +VL+ C F+ G ++ HSM
Sbjct: 347 SWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSM 406
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF---KGMDDASLV 340
+ + + L+ L + G + EA+ L +G D +LV
Sbjct: 407 TERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLV 451
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
++ +++ + + S D K L +F E+ + + P+ +TL VL ++ + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM 352
+VH K G E + V NSL+ +Y G I +F M +V+WN +I+ +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG- 124
Query: 353 MEQSRDNLYACWNG--TEALNLFSKLNC-SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
NG +A+ +F +++ S +K D T S LS C + GE+I+
Sbjct: 125 ------------NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY- 171
Query: 410 QTIKTGFLSDVIVGTSLINMYIKCA 434
+ + T F V +G +L++M+ KC
Sbjct: 172 RFVVTEFEMSVRIGNALVDMFCKCG 196
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 8/218 (3%)
Query: 51 RYRGFQEALSLAK---EGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXX 107
++ F EAL L + D+ + LL C + + +HG+I + D
Sbjct: 256 QFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV 315
Query: 108 XXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG 167
KCG +E A F + R+ +WT+L+ G N A ++ EM + G
Sbjct: 316 VGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVG 375
Query: 168 SYPSMNTLAIALNACTSLKSLKSGEQL-HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFA 226
T L AC + G ++ H+ ++++ + + L L + G L+ A
Sbjct: 376 VRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEA 435
Query: 227 LKAFKRIK----EKNVISWTAAISSCGDSGKAKKGLRI 260
+ +++ E V + + +S+ + G K R+
Sbjct: 436 EELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERV 473
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 146/280 (52%), Gaps = 1/280 (0%)
Query: 73 FYIPLLQQCIDKRSFSDTQI-VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH 131
F PL+ + + S I +H ++K G + D G + DA + FD
Sbjct: 112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
+P R+VV WT L GY + R + A +F +M+ G P + L+AC + L SG
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
E + Y+ + + ++ V L +LY+KCG++E A F + EK++++W+ I +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
K+G+ +F++ML EN++P+++++ LS C + L+LG S+ + + +NL +
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
N+L+ +Y K G + +FK M + +V NA I+G AK
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAK 391
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 153/308 (49%), Gaps = 11/308 (3%)
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
F H N+ + +L+ G+V N +F + G Y T + L ACT S
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
K G LH+ ++K + D + +L S+YS GRL A K F I +++V++WTA S
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
SG+ ++ + +F +M+ ++P+ Y + VLS C + L+ G + ++ + N
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
VR +L+ LY K G + +A+ +F M + +VTW+ MI G+A N + E
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS-------NSFP----KE 296
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
+ LF ++ +K D F+ LS C + A GE + + FL+++ + +LI+
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 429 MYIKCASV 436
MY KC ++
Sbjct: 357 MYAKCGAM 364
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 8/311 (2%)
Query: 43 FNTHLDPSRYRGFQEALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMK 99
F+ + R+R EA+ L K+ E + DS F + +L C+ + + ++ +
Sbjct: 184 FSGYTTSGRHR---EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 100 TGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHV 159
++ KCG ME AR FD M +++V W+T++ GY NS PK +
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 160 FDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSK 219
F +ML P ++ L++C SL +L GE + I ++ + + NAL +Y+K
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 220 CGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSV 279
CG + + FK +KEK+++ AAIS +G K +F + + P+ T +
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 280 LSQCCEIQFLELGTQ-VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DA 337
L C ++ G + +++ + + ++ L+ + G + +A L M
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 338 SLVTWNAMIAG 348
+ + W A+++G
Sbjct: 481 NAIVWGALLSG 491
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 11/245 (4%)
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+Q+H +I +H+ DT + N L + +++ F + N+ + + I+ ++
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ L +F+ + + + +T VL C +LG +HS+ K G+ ++
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
SLL +Y G + +A LF + D S+VTW A+ +G+ EA++
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR-----------EAID 198
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYI 431
LF K+ G+K D + VLS C + GE I + + V T+L+N+Y
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 432 KCASV 436
KC +
Sbjct: 259 KCGKM 263
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 181/373 (48%), Gaps = 17/373 (4%)
Query: 73 FYIPLL-QQCIDKRSFSDTQIVHGHIMKTGNHE-DXXXXXXXXXXXXKCGNMEDARRAFD 130
F P++ C + F VHG ++K G + + KCG ++DA FD
Sbjct: 126 FTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFD 185
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS---YPSMNTLAIALNACTSLKS 187
MP R+VVAWT ++ G+VQN + +M GS P+ TL AC++L +
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
LK G LH + +K + V +++ S YSK G A +F+ + ++++ SWT+ I+S
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
SG ++ +F EM ++ M P+ ++ ++++ ++ + G H + + +
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 308 LRVRNSLLYLYLKRGCIGEAQILF-KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG 366
V NSLL +Y K + A+ LF + ++ + WN M+ G+ KM
Sbjct: 366 STVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH----------- 414
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
+ + LF K+ G+++D + +SV+S C + A + G+ +H +KT + V SL
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 427 INMYIKCASVVCA 439
I++Y K + A
Sbjct: 475 IDLYGKMGDLTVA 487
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 148/312 (47%), Gaps = 15/312 (4%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
+ R F + RR++ W +++ + N + F ML +G P T + ++AC
Sbjct: 78 SSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE 137
Query: 185 LKSLKSGEQLHAYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
L G +H ++K+ D +T+VG + YSKCG L+ A F + +++V++WTA
Sbjct: 138 LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTA 197
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENM---QPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
IS +G+++ GL +M S +PN TL C + L+ G +H
Sbjct: 198 IISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAV 257
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
K G S+ V++S+ Y K G EA + F+ + D + +W ++IA A+ +
Sbjct: 258 KNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDME---- 313
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
E+ ++F ++ GM D S +++ G+M+ QG+ H I+ F D
Sbjct: 314 -------ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS 366
Query: 421 IVGTSLINMYIK 432
V SL++MY K
Sbjct: 367 TVCNSLLSMYCK 378
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 163/358 (45%), Gaps = 13/358 (3%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
Q C + + + + +HG +K G K GN +A +F + ++
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
+WT+++ ++ + +F +F EM + G +P ++ +N + + G+ H +
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSCGDSGKAKK 256
+I++ D++V N+L S+Y K L A K F RI E+ N +W + G K
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
+ +F ++ + ++ + + TSV+S C I + LG +H K + + V NSL+
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLID 476
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL 376
LY K G + A +F D +++TWNAMIA + C +A+ LF ++
Sbjct: 477 LYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVH-----------CEQSEKAIALFDRM 524
Query: 377 NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
K T ++L C + +G+ IH +T ++ + +LI+MY KC
Sbjct: 525 VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 12/272 (4%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
N AW T++ GY + +F ++ + G + +++C+ + ++ G+ LH
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
Y++K +D SV N+L LY K G L A + F + NVI+W A I+S +++
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSE 515
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
K + +F M+SEN +P+ TL ++L C LE G +H T+ +E NL + +L+
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALI 575
Query: 316 YLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSK 375
+Y K G + +++ LF + V WN MI+G+ + A+ LF +
Sbjct: 576 DMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE-----------SAIALFDQ 624
Query: 376 LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+ S +K TF ++LS C QG+++
Sbjct: 625 MEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
E+DS+ ++ C + + +H +++KT K G++ A R
Sbjct: 430 EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 489
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
F NV+ W ++ YV + + A +FD M+ PS TL L AC + S
Sbjct: 490 MFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
L+ G+ +H YI + + + S+ AL +Y+KCG LE + + F +K+ + W IS
Sbjct: 549 LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISG 608
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
G G + + +F +M +++P T ++LS C +E G ++ + + N
Sbjct: 609 YGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668
Query: 308 LRVRNSLLYLYLKRGCIGEAQ 328
L+ + L+ L + G + EA+
Sbjct: 669 LKHYSCLVDLLSRSGNLEEAE 689
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 15/260 (5%)
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
I++ C SL+S + +A II + + V + L S Y+ G+ + + F + +
Sbjct: 29 ISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR 88
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
++ W + I + +G + L F ML P+ +T V+S C E+ + +GT VH
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVH 148
Query: 297 SMCTKL-GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
+ K G++ N V S +Y Y K G + +A ++F M D +V W A+I+GH + E
Sbjct: 149 GLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGES 208
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLD---LFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
Y C K++ +G +D T C + A +G +H +
Sbjct: 209 EGGLGYLC-----------KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAV 257
Query: 413 KTGFLSDVIVGTSLINMYIK 432
K G S V +S+ + Y K
Sbjct: 258 KNGLASSKFVQSSMFSFYSK 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
+ LL C++ S Q++H +I +T + + KCG++E +R FD +
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 596
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
++ V W ++ GY + + A +FD+M + P+ T L+ACT ++ G++L
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGK 253
+ +Y + + + L L S+ G LE A + + + W +SSC G+
Sbjct: 657 FLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Query: 254 AKKGLRIFVEMLSENMQPNEYTL 276
+ G+R+ ++ + Q + Y +
Sbjct: 717 FEMGIRMAERAVASDPQNDGYYI 739
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 152/274 (55%), Gaps = 11/274 (4%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
++ RR F+ MPR++VV++ T++ GY Q+ + A + EM T P TL+ L
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+ + G+++H Y+I+ ID D +G++L +Y+K R+E + + F R+ ++ ISW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ ++ +G+ + LR+F +M++ ++P +SV+ C + L LG Q+H +
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
G+ SN+ + ++L+ +Y K G I A+ +F M+ V+W A+I GHA L+
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA---------LH 422
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+G EA++LF ++ G+K + F +VL+ C
Sbjct: 423 G--HGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 47/339 (13%)
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V+AW +++ + S A F EM +G P N L +CT + L+ GE +H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 197 YIIKYHIDFDTSVGNALCSLYSK---------CGR-----------------------LE 224
+I++ +D D GNAL ++Y+K G +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 225 FALKAFKRIKE----KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVL 280
F + + +R+ E K+V+S+ I+ SG + LR+ EM + +++P+ +TL+SVL
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 281 SQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
E + G ++H + G +S++ + +SL+ +Y K I +++ +F + +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA 400
+WN+++AG+ ++ R N EAL LF ++ + +K FSSV+ C +
Sbjct: 310 SWNSLVAGY---VQNGRYN--------EALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 401 FVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
G+Q+H ++ GF S++ + ++L++MY KC ++ A
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA 397
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 9/242 (3%)
Query: 55 FQEALSLAKE-GTEEV--DS---SFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXX 108
+++AL + +E GT ++ DS S +P+ + +D + +HG++++ G D
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD---VIKGKEIHGYVIRKGIDSDVYI 279
Query: 109 XXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS 168
K +ED+ R F + R+ ++W +L+ GYVQN R A +F +M+
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 169 YPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALK 228
P + + AC L +L G+QLH Y+++ + + +AL +YSKCG ++ A K
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 229 AFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF 288
F R+ + +SWTA I G + + +F EM + ++PN+ +VL+ C +
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 289 LE 290
++
Sbjct: 460 VD 461
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 48/290 (16%)
Query: 183 TSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
T +KS +QLHA I+ TS + + S+Y+ L AL FK +K V++W
Sbjct: 16 TRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWK 74
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
+ I D K L FVEM + P+ SVL C + L G VH +L
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 303 GYESNLRVRNSLLYLYLK-------------------------------RGC-----IGE 326
G + +L N+L+ +Y K C I
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
+ +F+ M +V++N +IAG+A+ +Y +AL + ++ + +K D F
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQ------SGMY-----EDALRMVREMGTTDLKPDSF 243
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
T SSVL + V ++G++IH I+ G SDV +G+SL++MY K A +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI 293
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 175/387 (45%), Gaps = 29/387 (7%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
+ PLL+ C +I+H ++KTG D K + DA + D MP
Sbjct: 34 FPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMP 93
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
R + + + G ++N + AF +F + +GS + T+A L C ++ G Q
Sbjct: 94 ERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQ 150
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
LH +K + + VG +L S+YS+CG A + F+++ K+V+++ A IS ++G
Sbjct: 151 LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGV 210
Query: 254 AKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
+F M + +PN+ T + ++ C + L+ G Q+H + K ++ V
Sbjct: 211 MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT 270
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDA-SLVTWNAMIAG-------------HAKMMEQSRD 358
+L+ +Y K C A I+F + D +L++WN++I+G K+ +
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK 330
Query: 359 NLYACWNG-----------TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
A WN EA F ++ M L +S+LS C + G++I
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 408 HAQTIKTGFLSDVIVGTSLINMYIKCA 434
H IK D+ V TSLI+MY+KC
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMYMKCG 417
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 157/354 (44%), Gaps = 50/354 (14%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H MK+G + +CG A R F+ +P ++VV + + G ++N
Sbjct: 151 LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGV 210
Query: 153 PKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
VF+ M S P+ T A+ AC SL +L+ G QLH ++K F+T VG
Sbjct: 211 MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT 270
Query: 212 ALCSLYSKCGRLEFALKAFKRIKE-KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
AL +YSKC + A F +K+ +N+ISW + IS +G+ + + +F ++ SE ++
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK 330
Query: 271 PNEYT-----------------------------------LTSVLSQCCEIQFLELGTQV 295
P+ T LTS+LS C +I L+ G ++
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA--SLVTWNAMIAGHAKMM 353
H K E ++ V SL+ +Y+K G A+ +F + V WN MI+G+ K
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHG 450
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
E C A+ +F L ++ L TF++VLS C +G QI
Sbjct: 451 E--------C---ESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 126/264 (47%), Gaps = 13/264 (4%)
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
P+ T L +C L + G LHA ++K D AL S+Y K ++ ALK
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+ E+ + S AA+S ++G + R+F + N T+ SVL C +I
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI--- 145
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
E G Q+H + K G+E + V SL+ +Y + G A +F+ + S+VT+NA I+G
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG- 204
Query: 350 AKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
+ME NL NL K S + + TF + ++ C ++ G Q+H
Sbjct: 205 --LMENGVMNLVP-----SVFNLMRKF--SSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 410 QTIKTGFLSDVIVGTSLINMYIKC 433
+K F + +VGT+LI+MY KC
Sbjct: 256 LVMKKEFQFETMVGTALIDMYSKC 279
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 7/222 (3%)
Query: 120 GNMEDARRAFDHMP----RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G E A F+ + + + W +L+ G+ Q + AF F+ ML PS+ L
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCL 371
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI-- 233
L+AC+ + +LK+G+++H ++IK + D V +L +Y KCG +A + F R
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT 293
K K+ + W IS G G+ + + IF + E ++P+ T T+VLS C +E G+
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGS 491
Query: 294 QVHS-MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
Q+ M + GY+ + ++ L + G + EA+ + M
Sbjct: 492 QIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
PN++T +L C ++ + G +H+ K G+ ++ +L+ +Y+K + +A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTF 388
M + + + NA ++G ++E NG +A +F SG ++ T
Sbjct: 89 LDEMPERGIASVNAAVSG---LLE----------NGFCRDAFRMFGDARVSGSGMNSVTV 135
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
+SVL CG + G Q+H +K+GF +V VGTSL++MY +C V A+
Sbjct: 136 ASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAA 184
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM-PR- 134
LL C D + + + +HGH++K D KCG ARR FD P+
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
++ V W ++ GY ++ + A +F+ + PS+ T L+AC+ +++ G Q+
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Query: 195 HAYII-KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
+ +Y T + L + GRL A + ++ E + +++ + SC
Sbjct: 494 FRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSC 548
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 374 SKLNCSGMKLDL--------FTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTS 425
S L G LD+ FTF +L C ++ VQG +HAQ +KTGF DV T+
Sbjct: 12 SNLVTGGTSLDVILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATA 71
Query: 426 LINMYIKCASVVCA 439
L++MY+K V A
Sbjct: 72 LVSMYMKVKQVTDA 85
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 164/320 (51%), Gaps = 16/320 (5%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G + +A FD MP R+VV+W T++ G V ++ VF +M P+ T +I
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHID-FDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
+ T ++ GEQ+H I + ++ V N++ +Y + G ++AL F ++++
Sbjct: 142 LASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+V+SW I SC DSG + L F M +QP+EYT++ V+S C +++ L G Q
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
++C K+G+ SN V + + ++ K + ++ LF+ ++ V N+MI ++
Sbjct: 259 ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS------ 312
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
+ C G +AL LF ++ D FTFSSVLS V G +H+ IK GF
Sbjct: 313 ---WHCC--GEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKLGF 366
Query: 417 LSDVIVGTSLINMYIKCASV 436
D V TSL+ MY K SV
Sbjct: 367 DLDTAVATSLMEMYFKTGSV 386
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 13/297 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G + A F M R+VV+W L+L + + A F M P T+++
Sbjct: 181 RLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSM 240
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
++ C+ L+ L G+Q A IK ++ V A ++SKC RL+ ++K F+ +++ +
Sbjct: 241 VVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWD 300
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+ + I S + LR+F+ ++++++P+++T +SVLS + L+ G VHS
Sbjct: 301 SVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHS 359
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
+ KLG++ + V SL+ +Y K G + A +F D L+ WN +I G A+ SR
Sbjct: 360 LVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR---NSR 416
Query: 358 DNLYACWNGTEALNLFSKLNCS-GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
E+L +F++L + +K D T +L C +G QI + K
Sbjct: 417 --------AVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEK 465
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 19/257 (7%)
Query: 180 NACTSLKSLKSGEQLHAYIIKYHI-DFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
N C L KSG ++A + I D +T N K G L AL F + E++V
Sbjct: 43 NRCLQLY-FKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDV 101
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH-- 296
+SW IS G + G+R+F +M ++P E+T + + S + + G Q+H
Sbjct: 102 VSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL---VTCVRHGEQIHGN 158
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
++C+ + NL V NS++ +Y + G A +F M+D +V+WN +I +
Sbjct: 159 AICSGVS-RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSG--- 214
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
N AL+ F + ++ D +T S V+S+C + +G+Q A IK GF
Sbjct: 215 --------NKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 417 LSDVIVGTSLINMYIKC 433
LS+ IV + I+M+ KC
Sbjct: 267 LSNSIVLGAGIDMFSKC 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 81 CIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAW 140
C D R S + +K G + KC ++D+ + F + + + V
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 141 TTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK 200
+++ Y + + A +F + P T + L++ ++ L G +H+ +IK
Sbjct: 305 NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIK 363
Query: 201 YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRI 260
D DT+V +L +Y K G ++ A+ F + K++I W I + +A + L I
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 261 FVEML-SENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
F ++L +++++P+ TL +L CC F+ G Q+ S
Sbjct: 424 FNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFS 461
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 19/322 (5%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS--YPSMNTL 175
K G++ AR FD MP R VV WT LM Y +NS AF +F +M + S P T
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDT----SVGNALCSLYSKCGRLEFALKAFK 231
L C + Q+HA+ +K + FDT +V N L Y + RL+ A F+
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVK--LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
I EK+ +++ I+ G + + +F++M QP+++T + VL + L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G Q+H++ G+ + V N +L Y K + E ++LF M + V++N +I+ +++
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
D A +L+ F ++ C G F F+++LS+ + + G Q+H Q
Sbjct: 329 A-----DQYEA------SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 412 IKTGFLSDVIVGTSLINMYIKC 433
+ S + VG SL++MY KC
Sbjct: 378 LLATADSILHVGNSLVDMYAKC 399
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 11/308 (3%)
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
F+ +P ++ V + TL+ GY ++ + H+F +M +G PS T + L A L
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
G+QLHA + D SVGN + YSK R+ F + E + +S+ ISS
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+ + + L F EM + ++LS + L++G Q+H +S L
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
V NSL+ +Y K EA+++FK + + V+W A+I+G+ + L+
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ------KGLHGA----- 435
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
L LF+K+ S ++ D TF++VL + + G+Q+HA I++G L +V G+ L++
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 429 MYIKCASV 436
MY KC S+
Sbjct: 496 MYAKCGSI 503
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 164/352 (46%), Gaps = 20/352 (5%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXK 118
L + + G + D +F +L+ + F+ Q +H + TG D K
Sbjct: 239 LKMRQSGHQPSDFTFS-GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG----SYPSMNT 174
+ + R FD MP + V++ ++ Y Q + + + H F EM G ++P
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
L+IA N L SL+ G QLH + D VGN+L +Y+KC E A FK +
Sbjct: 358 LSIAAN----LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
++ +SWTA IS G GL++F +M N++ ++ T +VL L LG Q
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
+H+ + G N+ + L+ +Y K G I +A +F+ M D + V+WNA+I+ HA
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA---- 529
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
DN +G A+ F+K+ SG++ D + VL+ C QG +
Sbjct: 530 ---DN----GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 151/319 (47%), Gaps = 11/319 (3%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L+ C R S + ++ +++K G + KCG+M AR F+ M ++
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V+W +++ GY+Q+ A +F M+ T + ++ T L LK G+ LH+
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
IK I D SV NAL +Y+KCG + +LK F + + ++W IS+C G
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
GL++ +M + P+ T L C + LG ++H + GYES L++ N+L+
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL 376
+Y K GC+ + +F+ M +VTW MI + E G +AL F+ +
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE-----------GEKALETFADM 601
Query: 377 NCSGMKLDLFTFSSVLSVC 395
SG+ D F +++ C
Sbjct: 602 EKSGIVPDSVVFIAIIYAC 620
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 183/385 (47%), Gaps = 15/385 (3%)
Query: 55 FQEALSL---AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
F EAL +E D + +++ C +V+ I+ G D
Sbjct: 87 FPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNA 146
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS 171
+ G + AR+ FD MP R++V+W +L+ GY + + A ++ E+ ++ P
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPD 206
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK 231
T++ L A +L +K G+ LH + +K ++ V N L ++Y K R A + F
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ ++ +S+ I ++ +R+F+E L + +P+ T++SVL C ++ L L
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSL 325
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
+++ K G+ VRN L+ +Y K G + A+ +F M+ V+WN++I+G+
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI- 384
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
QS D + EA+ LF + + D T+ ++SV R+ G+ +H+
Sbjct: 385 ---QSGDLM-------EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 412 IKTGFLSDVIVGTSLINMYIKCASV 436
IK+G D+ V +LI+MY KC V
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEV 459
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 157/311 (50%), Gaps = 12/311 (3%)
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
DARR FD M R+ V++ T++ GY++ + + +F E L P + T++ L AC
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK-PDLLTVSSVLRACG 318
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
L+ L + ++ Y++K +++V N L +Y+KCG + A F ++ K+ +SW +
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
IS SG + +++F M+ Q + T ++S + L+ G +HS K G
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+L V N+L+ +Y K G +G++ +F M VTWN +I+ + + +
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA------- 491
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
L + +++ S + D+ TF L +C + A G++IH ++ G+ S++ +G
Sbjct: 492 ----TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 424 TSLINMYIKCA 434
+LI MY KC
Sbjct: 548 NALIEMYSKCG 558
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 149/309 (48%), Gaps = 16/309 (5%)
Query: 133 PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGE 192
P +NV W +++ + +N A + ++ + P T + AC L + G+
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
++ I+ + D VGNAL +YS+ G L A + F + ++++SW + IS G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
++ L I+ E+ + + P+ +T++SVL + ++ G +H K G S + V N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--MMEQSRDNLYACWNGTEAL 370
L+ +YLK +A+ +F MD V++N MI G+ K M+E E++
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE-------------ESV 293
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
+F + N K DL T SSVL CG + + I+ +K GF+ + V LI++Y
Sbjct: 294 RMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVY 352
Query: 431 IKCASVVCA 439
KC ++ A
Sbjct: 353 AKCGDMITA 361
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 15/256 (5%)
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE-K 236
AL++ ++L L+ ++HA +I +D L YS +L F+R+ K
Sbjct: 13 ALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
NV W + I + +G + L + ++ + P++YT SV+ C + E+G V+
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
+G+ES+L V N+L+ +Y + G + A+ +F M LV+WN++I+G+ S
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY------S 183
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
Y EAL ++ +L S + D FT SSVL G ++ QG+ +H +K+G
Sbjct: 184 SHGYY-----EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 417 LSDVIVGTSLINMYIK 432
S V+V L+ MY+K
Sbjct: 239 NSVVVVNNGLVAMYLK 254
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%)
Query: 67 EEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDAR 126
E+ D Y+ L+ + +H + +K+G D KCG + D+
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 127 RAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLK 186
+ F M + V W T++ V+ V +M + P M T + L C SL
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
+ + G+++H ++++ + + +GNAL +YSKCG LE + + F+R+ ++V++WT I
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+ G G+ +K L F +M + P+ +++ C ++ G
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 19/348 (5%)
Query: 62 AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGN 121
A++G + + LL+ C R+ VH I + CG
Sbjct: 83 AQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGY 142
Query: 122 MEDARRAFDHMPRRN--VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
E A FD M +R+ AW +L+ GY + + + A ++ +M G P T L
Sbjct: 143 AEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVL 202
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
AC + S++ GE +H ++K +D V NAL +Y+KCG + A F I K+ +
Sbjct: 203 KACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYV 262
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
SW + ++ G + L IF M+ ++P++ ++SVL++ + G Q+H
Sbjct: 263 SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWV 319
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+ G E L V N+L+ LY KRG +G+A +F M + V+WNA+I+ H+K
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK-------- 371
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+ L F +++ + K D TF SVLS+C GE++
Sbjct: 372 ------NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERL 413
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 152/299 (50%), Gaps = 14/299 (4%)
Query: 55 FQEALSL----AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
+++A++L A++G + D + +L+ C S + +H ++K G D
Sbjct: 176 YEDAMALYFQMAEDGVKP-DRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLN 234
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
KCG++ AR FD +P ++ V+W +++ GY+ + A +F M+ G P
Sbjct: 235 ALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEP 294
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
+ +AI+ + + S K G QLH ++I+ ++++ SV NAL LYSK G+L A F
Sbjct: 295 --DKVAIS-SVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIF 351
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
++ E++ +SW A IS+ K GL+ F +M N +P+ T SVLS C +E
Sbjct: 352 DQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVE 408
Query: 291 LGTQVHSMCTK-LGYESNLRVRNSLLYLYLKRGCIGEA-QILFKGMD-DASLVTWNAMI 346
G ++ S+ +K G + + ++ LY + G + EA ++ + M +A W A++
Sbjct: 409 DGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALL 467
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 276 LTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD 335
S+L C ++ ++ G +VH + +NL + + L+ LY G A +F M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 336 --DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
D+S WN++I+G+A++ + +A+ L+ ++ G+K D FTF VL
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYE-----------DAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 394 VCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
CG + + GE IH +K GF DV V +L+ MY KC +V A
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 168/340 (49%), Gaps = 11/340 (3%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
+V S Y L++ CI +S + V+G +M G + KCG + DARR
Sbjct: 120 KVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARR 179
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
FD +P RN+ ++ +++ G+V AF +F M S +T A+ L A L S
Sbjct: 180 LFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGS 239
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
+ G+QLH +K + +T V L +YSKCG +E A AF+ + EK ++W I+
Sbjct: 240 IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
G +++ L + +M + +++TL+ ++ ++ LEL Q H+ + G+ES
Sbjct: 300 YALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
+ +L+ Y K G + A+ +F + ++++WNA++ G+A R GT
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYAN---HGR--------GT 408
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+A+ LF K+ + + + TF +VLS C QG +I
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEI 448
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 140/287 (48%), Gaps = 12/287 (4%)
Query: 151 SRPKHAFHVFDEMLHTGSYP-SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
+R + AF +F+ + S+ ++T + AC LKS++ ++++ +++ + + +
Sbjct: 101 NRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYM 160
Query: 210 GNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
N + ++ KCG + A + F I E+N+ S+ + IS + G + +F M E
Sbjct: 161 MNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS 220
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
+T +L + + +G Q+H KLG N V L+ +Y K G I +A+
Sbjct: 221 DCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280
Query: 330 LFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFS 389
F+ M + + V WN +IAG+A L+ EAL L + SG+ +D FT S
Sbjct: 281 AFECMPEKTTVAWNNVIAGYA---------LHG--YSEEALCLLYDMRDSGVSIDQFTLS 329
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
++ + ++ +Q HA I+ GF S+++ T+L++ Y K V
Sbjct: 330 IMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRV 376
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 90 TQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQ 149
T+ H +++ G + K G ++ AR FD +PR+N+++W LM GY
Sbjct: 344 TKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYAN 403
Query: 150 NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
+ R A +F++M+ P+ T L+AC + G ++ + + H ++
Sbjct: 404 HGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAM 463
Query: 210 GNA-LCSLYSKCGRLEFALKAFKRIKEKNVIS-WTAAISSC 248
A + L + G L+ A+ +R K ++ W A +++C
Sbjct: 464 HYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC 504
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 172/373 (46%), Gaps = 26/373 (6%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D+ Y L C+ F + ++KTG D + G+ ARR F
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPK-HAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
D M +++++W +L+ G Q A +F +M+ G + + C L
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
K Q+H IK + VGN L S YSKCG LE F ++ E+NV+SWT ISS
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN 352
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC-CEIQFLELGTQVHSMCTKLGYESN 307
D + IF+ M + + PNE T +++ C Q E G ++H +C K G+ S
Sbjct: 353 KDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE-GLKIHGLCIKTGFVSE 406
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
V NS + LY K + +A+ F+ + +++WNAMI+G A+ NG
Sbjct: 407 PSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ-------------NGF 453
Query: 368 --EALNLFSKLNCSGMKLDLFTFSSVLSVC--GRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
EAL +F M + +TF SVL+ ++ QG++ HA +K G S +V
Sbjct: 454 SHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS 512
Query: 424 TSLINMYIKCASV 436
++L++MY K ++
Sbjct: 513 SALLDMYAKRGNI 525
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 173/366 (47%), Gaps = 23/366 (6%)
Query: 54 GFQEAL---SLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
GF+ + + +EG E +D + ++ C + + +HG +K G
Sbjct: 257 GFEAVVIFRDMMREGVE-LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
KCG +E + F M RNVV+WTT++ +S A +F M G YP
Sbjct: 316 ILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYP 370
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
+ T +NA + +K G ++H IK + SVGN+ +LY+K LE A KAF
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
+ I + +ISW A IS +G + + L++F+ +E M PNEYT SVL+ + +
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDIS 489
Query: 291 L--GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
+ G + H+ KLG S V ++LL +Y KRG I E++ +F M + W ++I+
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISA 549
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
++ + + +NLF K+ + DL TF SVL+ C R +G +I
Sbjct: 550 YS-----------SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIF 598
Query: 409 AQTIKT 414
I+
Sbjct: 599 NMMIEV 604
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 157/323 (48%), Gaps = 34/323 (10%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS-------RPKHAFHVFDEMLHTGSYP 170
K G ++A F+++ +VV+W T++ G+ N R K A VFD
Sbjct: 123 KAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAF------- 175
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
T + AL+ C + G QL + ++K ++ D VGN+ ++YS+ G A + F
Sbjct: 176 ---TYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 231 KRIKEKNVISWTAAISSCGDSGK-AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+ K++ISW + +S G + + IF +M+ E ++ + + TSV++ CC L
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
+L Q+H +C K GYES L V N L+ Y K G + + +F M + ++V+W MI+
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS- 351
Query: 350 AKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
N +A+++F + G+ + TF +++ +G +IH
Sbjct: 352 ---------------NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG 396
Query: 410 QTIKTGFLSDVIVGTSLINMYIK 432
IKTGF+S+ VG S I +Y K
Sbjct: 397 LCIKTGFVSEPSVGNSFITLYAK 419
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 150/314 (47%), Gaps = 19/314 (6%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGY-VQNSRPKHAFHVFDEMLHTGSYPS-MN--TLAIALN 180
A + FD +RN + ++ + P A +F E L G + M+ TL +AL
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
AC LK G Q+H + V NA+ +Y K GR + AL F+ + + +V+S
Sbjct: 87 ACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W +S D+ A L V M S + + +T ++ LS C + LG Q+ S
Sbjct: 145 WNTILSGFDDNQIA---LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
K G ES+L V NS + +Y + G A+ +F M +++WN++++G S++
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG------LSQEGT 255
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
+ G EA+ +F + G++LD +F+SV++ C QIH IK G+ S +
Sbjct: 256 F----GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 421 IVGTSLINMYIKCA 434
VG L++ Y KC
Sbjct: 312 EVGNILMSRYSKCG 325
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+E TL L C L+ G Q+H T G+ S + V N+++ +Y K G A +F
Sbjct: 77 DEVTLCLALKACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
+ + D +V+WN +++G DN A LN ++ +G+ D FT+S+
Sbjct: 135 ENLVDPDVVSWNTILSGF-------DDNQIA-------LNFVVRMKSAGVVFDAFTYSTA 180
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
LS C F+ G Q+ + +KTG SD++VG S I MY + S
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 4/188 (2%)
Query: 86 SFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLML 145
S Q H H++K G + K GN++++ + F+ M ++N WT+++
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 146 GYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK-YHID 204
Y + + ++F +M+ P + T L AC + G ++ +I+ Y+++
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 205 FDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW-TAAISSCGDSGKAKKGLRIFVE 263
+ + + + GRL+ A + + S + + SC G K G + V
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAK--VA 666
Query: 264 MLSENMQP 271
L+ M+P
Sbjct: 667 ELAMEMKP 674
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 17/369 (4%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXXXXXXXXKCGNMEDARRAFDHM 132
++ LL+ CI R+ Q++H H++K C +E AR FD +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 133 P--RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS 190
P R N +AW ++ Y N + A ++ +ML++G P+ T L AC L+++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
G+ +H+++ D V AL Y+KCG LE A+K F + ++++++W A IS
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 251 SGKAKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
+ +F++M + + PN T+ + L G VH CT++G+ ++L
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA--KMMEQSRDNLYACWNGT 367
V+ +L +Y K CI A+ +F + VTW+AMI G+ +M++++ + +
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML--- 298
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLI 427
+N + + +L C R G +H +K GF+ D+ V ++I
Sbjct: 299 --------VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTII 350
Query: 428 NMYIKCASV 436
+ Y K S+
Sbjct: 351 SFYAKYGSL 359
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 13/324 (4%)
Query: 86 SFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLML 145
+ + + VHG+ + G D K + ARR FD ++N V W+ ++
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 146 GYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL--NACTSLKSLKSGEQLHAYIIKYHI 203
GYV+N K A VF +ML + + +AI L C L G +H Y +K
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 204 DFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVE 263
D +V N + S Y+K G L A + F I K+VIS+ + I+ C + + ++ R+F E
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
M + ++P+ TL VL+ C + L G+ H C GY N + N+L+ +Y K G
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKL 383
+ A+ +F M +V+WN M+ G ++ G EAL+LF+ + +G+
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFG---------IHGL--GKEALSLFNSMQETGVNP 508
Query: 384 DLFTFSSVLSVCGRMVAFVQGEQI 407
D T ++LS C +G+Q+
Sbjct: 509 DEVTLLAILSACSHSGLVDEGKQL 532
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 162/366 (44%), Gaps = 14/366 (3%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y +L+ C R+ D +++H H+ + D KCG +E A + FD MP
Sbjct: 106 YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHT-GSYPSMNTLAIALNACTSLKSLKSGE 192
+R++VAW ++ G+ + +F +M G P+++T+ A +L+ G+
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
+H Y + D V + +Y+K + +A + F +KN ++W+A I ++
Sbjct: 226 AVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENE 285
Query: 253 KAKKGLRIFVEMLSEN--MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
K+ +F +ML + + +L C L G VH K G+ +L V
Sbjct: 286 MIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTV 345
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
+N+++ Y K G + +A F + ++++N++I G E+
Sbjct: 346 QNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPE-----------ESF 394
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
LF ++ SG++ D+ T VL+ C + A G H + G+ + + +L++MY
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMY 454
Query: 431 IKCASV 436
KC +
Sbjct: 455 TKCGKL 460
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L C S + VH + +K G D K G++ DA R F + ++
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V+++ +L+ G V N RP+ +F +F EM +G P + TL L AC+ L +L G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
Y + + +TS+ NAL +Y+KCG+L+ A + F + +++++SW + G G K+
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR--NSL 314
L +F M + P+E TL ++LS C ++ G Q+ + ++ + R+ N +
Sbjct: 494 ALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM 553
Query: 315 LYLYLKRGCIGEA 327
L + G + EA
Sbjct: 554 TDLLARAGYLDEA 566
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 15/265 (5%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTS-VGNALCSLYSKCGRLEFALKAFKRIKEK- 236
L C ++L G+ +H +++K + +S V L LY+ C +E A F I
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPR 65
Query: 237 -NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
N I+W I + + A+K L ++ +ML+ ++P +YT VL C ++ ++ G +
Sbjct: 66 INPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLI 125
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
HS + +++ V +L+ Y K G + A +F M +V WNAMI+G +
Sbjct: 126 HSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS----- 180
Query: 356 SRDNLYACWNGTEALNLFSKLN-CSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
L+ C T+ + LF + G+ +L T + GR A +G+ +H +
Sbjct: 181 ----LHCCL--TDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 415 GFLSDVIVGTSLINMYIKCASVVCA 439
GF +D++V T ++++Y K ++ A
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYA 259
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 189/435 (43%), Gaps = 41/435 (9%)
Query: 33 QNISLQKSHKFNTHLDPSRYRGF-QEAL----SLAKEGTEEVDSSFYIPLLQQCIDKRSF 87
+++ + +N + +RGF +E + L + G +SSF + +L+ +
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSF-LGVLKGVSCVKDL 231
Query: 88 SDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGY 147
++ +H K G + KCGN A R F ++V+W ++
Sbjct: 232 DISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICAT 291
Query: 148 VQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT 207
++ P A +F M G P+ T L + ++ L G Q+H +IK +
Sbjct: 292 AKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGI 351
Query: 208 SVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG----LRIFVE 263
+GNAL Y+KCG LE + F I++KN++ W A + SG A K L +F++
Sbjct: 352 VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALL-----SGYANKDGPICLSLFLQ 406
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
ML +P EYT ++ L CC + Q+HS+ ++GYE N V +SL+ Y K
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQL 462
Query: 324 IGEAQILFKGMDDASLVTWNAMIAG----------HAKMMEQSRDNLYACWN-------- 365
+ +A +L + V ++AG K++ WN
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 366 ---GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF-LSDVI 421
E + LF + S ++ D +TF S+LS+C ++ G IH KT F +D
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTF 582
Query: 422 VGTSLINMYIKCASV 436
V LI+MY KC S+
Sbjct: 583 VCNVLIDMYGKCGSI 597
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 157/320 (49%), Gaps = 14/320 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G + A + FD MP RN V++ T++ GY + A+ VF EM + G P+ +T++
Sbjct: 61 KLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS- 119
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
L +C SL +++G QLH +KY + D VG L LY + LE A + F+ + K
Sbjct: 120 GLLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
++ +W +S G G K+ + F E++ E + VL ++ L++ Q+H
Sbjct: 179 SLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLH 238
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
TK G + + V NSL+ Y K G A+ +F+ +V+WNA+I AK
Sbjct: 239 CSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE--- 295
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
N +AL LF + G + T+ SVL V + G QIH IK G
Sbjct: 296 --------NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 417 LSDVIVGTSLINMYIKCASV 436
+ +++G +LI+ Y KC ++
Sbjct: 348 ETGIVLGNALIDFYAKCGNL 367
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 16/311 (5%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
+E A + F+ MP +++ W +M K F E++ G+ + ++ L
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+ +K L +QLH K +D + SV N+L S Y KCG A + F+ +++SW
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
A I + S K L++FV M PN+ T SVL +Q L G Q+H M K
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
G E+ + + N+L+ Y K G + ++++ F + D ++V WNA+++G+A
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK--------- 395
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
+G L+LF ++ G + +TFS+ L C + +Q+H+ ++ G+ +
Sbjct: 396 ---DGPICLSLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDY 448
Query: 422 VGTSLINMYIK 432
V +SL+ Y K
Sbjct: 449 VLSSLMRSYAK 459
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 51/342 (14%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG ++K G KCGN+ED+R FD++ +N+V W L+ GY
Sbjct: 338 IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG 397
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHID-------- 204
P +F +ML G P+ T + AL +C + +QLH+ I++ +
Sbjct: 398 PI-CLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSS 452
Query: 205 -----------------FDTSVG-------NALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
D + G N + +YS+ G+ ++K +++ + +S
Sbjct: 453 LMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVS 512
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W AI++C S ++ + +F ML N++P++YT S+LS C ++ L LG+ +H + T
Sbjct: 513 WNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLIT 572
Query: 301 KLGYE-SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
K + ++ V N L+ +Y K G I +F+ + +L+TW A+I+
Sbjct: 573 KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISC----------- 621
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC--GRMV 399
L G EAL F + G K D +F S+L+ C G MV
Sbjct: 622 LGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMV 663
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 6/245 (2%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G ++ + + + + V+W + ++ + +F ML + P T L
Sbjct: 493 GQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSIL 552
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDF---DTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
+ C+ L L G +H I K DF DT V N L +Y KCG + +K F+ +EK
Sbjct: 553 SLCSKLCDLTLGSSIHGLITK--TDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREK 610
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
N+I+WTA IS G G ++ L F E LS +P+ + S+L+ C ++ G +
Sbjct: 611 NLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLF 670
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAGHAKMMEQ 355
G E + + L + G + EA+ L + M A W + G + E+
Sbjct: 671 QKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEE 730
Query: 356 SRDNL 360
R+ L
Sbjct: 731 QRNTL 735
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 20/262 (7%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDF--DTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
LN C S + LHA I V N + SLY K G + A K F ++ E+
Sbjct: 19 LNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPER 78
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
N +S+ I G K +F EM PN+ T++ +LS C + GTQ+H
Sbjct: 79 NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS--CASLDVRAGTQLH 136
Query: 297 SMCTKLG-YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIA--GHAKMM 353
+ K G + ++ V LL LY + + A+ +F+ M SL TWN M++ GH +
Sbjct: 137 GLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFL 196
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
+ E + F +L G L +F VL + +Q+H K
Sbjct: 197 K-------------ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATK 243
Query: 414 TGFLSDVIVGTSLINMYIKCAS 435
G ++ V SLI+ Y KC +
Sbjct: 244 KGLDCEISVVNSLISAYGKCGN 265
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 177/366 (48%), Gaps = 11/366 (3%)
Query: 72 SFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH 131
S Y+ L+ C + ++HG+ + G + K G+++ AR+ FD
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR 72
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
+ +R+VV+WT ++ + + A +F EM + T L +C L LK G
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
Q+H + K + + V +AL SLY++CG++E A F +KE++++SW A I +
Sbjct: 133 MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTAN 192
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
A +F ML+E +P+ +T S+L ++ LE+ +++H + KLG+ + +
Sbjct: 193 ACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI 252
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
SL+ Y+K G + A L +G L++ A+I G ++ + D A +
Sbjct: 253 RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD----------AFD 302
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS-DVIVGTSLINMY 430
+F + K+D SS+L +C + + G QIH +K+ + DV +G SLI+MY
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMY 362
Query: 431 IKCASV 436
K +
Sbjct: 363 AKSGEI 368
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 161/347 (46%), Gaps = 22/347 (6%)
Query: 57 EALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXX 113
+AL L KE E + Y +L+ C D + +HG + K +
Sbjct: 96 DALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALL 155
Query: 114 XXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
+CG ME+AR FD M R++V+W ++ GY N+ +F +F ML G P
Sbjct: 156 SLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCF 215
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T L A +K L+ +LH IK +++ +L + Y KCG L A K +
Sbjct: 216 TFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGT 275
Query: 234 KEKNVISWTAAISSCGDSGK-AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
K+++++S TA I+ IF +M+ + +E ++S+L C I + +G
Sbjct: 276 KKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIG 335
Query: 293 TQVHSMCTKLGYESNLR----VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
Q+H K S +R + NSL+ +Y K G I +A + F+ M + + +W ++IAG
Sbjct: 336 RQIHGFALK---SSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAG 392
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+ + N +A++L++++ +K + TF S+LS C
Sbjct: 393 YGRH-----------GNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 124/244 (50%), Gaps = 25/244 (10%)
Query: 208 SVGNALCS----------LYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
S+ N CS LY K G ++ A K F RI +++V+SWTA IS G
Sbjct: 38 SITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDA 97
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYL 317
L +F EM E+++ N++T SVL C ++ L+ G Q+H K NL VR++LL L
Sbjct: 98 LLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSL 157
Query: 318 YLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLN 377
Y + G + EA++ F M + LV+WNAMI G+ AC + +LF +
Sbjct: 158 YARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA---------NAC--ADTSFSLFQLML 206
Query: 378 CSGMKLDLFTFSSVL--SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
G K D FTF S+L S+ + + V ++H IK GF + SL+N Y+KC S
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVS--ELHGLAIKLGFGRSSALIRSLVNAYVKCGS 264
Query: 436 VVCA 439
+ A
Sbjct: 265 LANA 268
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL+ I + +HG +K G KCG++ +A + + +R+
Sbjct: 220 LLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRD 279
Query: 137 VVAWTTLMLGYVQ-NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+++ T L+ G+ Q N+ AF +F +M+ + ++ L CT++ S+ G Q+H
Sbjct: 280 LLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIH 339
Query: 196 AYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
+ +K I FD ++GN+L +Y+K G +E A+ AF+ +KEK+V SWT+ I+ G G
Sbjct: 340 GFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNF 399
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH-SMCTKLGYESNLRVRNS 313
+K + ++ M E ++PN+ T S+LS C ELG +++ +M K G E+ +
Sbjct: 400 EKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSC 459
Query: 314 LLYLYLKRGCIGEAQILFK---GMDDASLVTWNAMI 346
++ + + G + EA L + G+ S TW A +
Sbjct: 460 IIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 174/347 (50%), Gaps = 14/347 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXX-XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
VHGH++ TG + KCG++ DARR F M ++ V+W +++ G QN
Sbjct: 335 VHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNG 394
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
A + M P TL +L++C SLK K G+Q+H +K ID + SV N
Sbjct: 395 CFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA-KKGLRIFVEMLSENMQ 270
AL +LY++ G L K F + E + +SW + I + S ++ + + F+ +
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
N T +SVLS + F ELG Q+H + K N+L+ Y K G + + +
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 331 FKGM-DDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFS 389
F M + VTWN+MI+G+ + L A +AL+L + +G +LD F ++
Sbjct: 575 FSRMAERRDNVTWNSMISGYI------HNELLA-----KALDLVWFMLQTGQRLDSFMYA 623
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+VLS + +G ++HA +++ SDV+VG++L++MY KC +
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 173/378 (45%), Gaps = 27/378 (7%)
Query: 75 IPL--LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM 132
+PL +Q C+ R + + H + K +D + G+ AR+ FD M
Sbjct: 5 VPLSFVQSCVGHRGAA--RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 133 PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS-- 190
P RN V+W ++ GY +N K A +M+ G + + L AC + S+
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKC-GRLEFALKAFKRIKEKNVISWTAAISSCG 249
G Q+H + K D V N L S+Y KC G + +AL AF I+ KN +SW + IS
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT--KLGYESN 307
+G + RIF M + +P EYT S+++ C + ++ MCT K G ++
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
L V + L+ + K G + A+ +F M+ + VT N ++ G + W G
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK----------W-GE 291
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLS-----VCGRMVAFVQGEQIHAQTIKTGFLSDVI- 421
EA LF +N S + + ++ +LS V +G ++H I TG + ++
Sbjct: 292 EATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVG 350
Query: 422 VGTSLINMYIKCASVVCA 439
+G L+NMY KC S+ A
Sbjct: 351 IGNGLVNMYAKCGSIADA 368
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 17/346 (4%)
Query: 97 IMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHA 156
I K+G D K G++ AR+ F+ M RN V LM+G V+ + A
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 157 FHVFDEMLHTGSYPSMNTLAIALNACTSLK-----SLKSGEQLHAYIIKYH-IDFDTSVG 210
+F +M ++ S + I L++ LK G ++H ++I +DF +G
Sbjct: 294 TKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
N L ++Y+KCG + A + F + +K+ +SW + I+ +G + + + M ++
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P +TL S LS C +++ +LG Q+H KLG + N+ V N+L+ LY + G + E + +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSS 390
F M + V+WN++I A+ S +L EA+ F +G KL+ TFSS
Sbjct: 473 FSSMPEHDQVSWNSIIGALAR----SERSL------PEAVVCFLNAQRAGQKLNRITFSS 522
Query: 391 VLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
VLS + G+QIH +K + +LI Y KC +
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 2/202 (0%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP-RRNVVAWTTLMLGYVQNS 151
+HG +K ++ KCG M+ + F M RR+ V W +++ GY+ N
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
A + ML TG A L+A S+ +L+ G ++HA ++ ++ D VG+
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQ 270
AL +YSKCGRL++AL+ F + +N SW + IS G+ ++ L++F M L
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTP 718
Query: 271 PNEYTLTSVLSQCCEIQFLELG 292
P+ T VLS C LE G
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEG 740
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 151/345 (43%), Gaps = 25/345 (7%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
I L C + Q +HG +K G + + G + + R+ F MP
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 135 RNVVAWTTLMLGYVQNSRP-KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+ V+W +++ ++ R A F G + T + L+A +SL + G+Q
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSCGDSG 252
+H +K +I + + NAL + Y KCG ++ K F R+ E+ + ++W + IS +
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
K L + ML + + + +VLS + LE G +VH+ + ES++ V +
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ +Y K G + A F M + +WN+MI+G+A+ + G EAL L
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ-----------GEEALKL 707
Query: 373 FSKLNCSGM-KLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
F + G D TF VLS C HA ++ GF
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACS-----------HAGLLEEGF 741
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 94/248 (37%), Gaps = 46/248 (18%)
Query: 67 EEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDAR 126
+ +DS Y +L + VH ++ D KCG ++ A
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYAL 674
Query: 127 RAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN-TLAIALNACTSL 185
R F+ MP RN +W +++ GY ++ + + A +F+ M G P + T L+AC+
Sbjct: 675 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS-- 732
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
HA G LE K F+ + + ++
Sbjct: 733 ---------HA------------------------GLLEEGFKHFESMSDSYGLAPRIEH 759
Query: 246 SSC-----GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI--QFLELGTQVHSM 298
SC G +G+ K L F+E + M+PN +VL CC + ELG + M
Sbjct: 760 FSCMADVLGRAGELDK-LEDFIEKMP--MKPNVLIWRTVLGACCRANGRKAELGKKAAEM 816
Query: 299 CTKLGYES 306
+L E+
Sbjct: 817 LFQLEPEN 824
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 189/427 (44%), Gaps = 75/427 (17%)
Query: 56 QEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXX 115
+EAL L KE D+ +L+ C + + + +H I+ G D
Sbjct: 172 EEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV 231
Query: 116 XXKCGNME-------------------------------DARRAFDHMPRRNVVAWTTLM 144
KCG++ ++R FD R V+ W +++
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 145 LGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHID 204
GY+ N+ A +F+EM + S TLA +NAC L L++G+Q+H + K+ +
Sbjct: 292 SGYIANNMKMEALVLFNEMRNETREDS-RTLAAVINACIGLGFLETGKQMHCHACKFGLI 350
Query: 205 FDTSVGNALCSLYSKCG-------------------------------RLEFALKAFKRI 233
D V + L +YSKCG R++ A + F+RI
Sbjct: 351 DDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI 410
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT 293
+ K++ISW + + +G + L F +M ++ +E +L+SV+S C I LELG
Sbjct: 411 ENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGE 470
Query: 294 QVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMM 353
QV + T +G +S+ V +SL+ LY K G + + +F M + V WN+MI+G+A
Sbjct: 471 QVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNG 530
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI-HAQTI 412
+ G EA++LF K++ +G++ TF VL+ C +G ++ + +
Sbjct: 531 Q-----------GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKV 579
Query: 413 KTGFLSD 419
GF+ D
Sbjct: 580 DHGFVPD 586
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 173/370 (46%), Gaps = 55/370 (14%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G + ARR F+ MP ++VV +L+ GY+ N + A +F E+ + ++ T+
Sbjct: 136 KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTV-- 193
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L AC L++LK G+Q+HA I+ ++ D+ + ++L ++Y+KCG L A ++I+E +
Sbjct: 194 -LKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 252
Query: 238 -------------------------------VISWTAAISSCGDSGKAKKGLRIFVEMLS 266
VI W + IS + + L +F EM +
Sbjct: 253 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN 312
Query: 267 ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
E + + TL +V++ C + FLE G Q+H K G ++ V ++LL +Y K G E
Sbjct: 313 ET-REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPME 371
Query: 327 AQILFKGMDDASLVTWNAMIAGH---------AKMMEQSRDNLYACWNG----------- 366
A LF ++ + N+MI + ++ E+ + WN
Sbjct: 372 ACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCT 431
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
E L F +++ + D + SSV+S C + + GEQ+ A+ G SD +V +SL
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSL 491
Query: 427 INMYIKCASV 436
I++Y KC V
Sbjct: 492 IDLYCKCGFV 501
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 169/390 (43%), Gaps = 65/390 (16%)
Query: 68 EVD-SSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX-XXXXXXKCGNMEDA 125
EVD +Y+ LLQ C + + + +G ++K G + G M A
Sbjct: 22 EVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIA 81
Query: 126 RRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL 185
R FD MP RN +W T++ GY+ + + FD M Y
Sbjct: 82 RNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYS--------------- 126
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
N + S ++K G L A + F + EK+V++ + +
Sbjct: 127 ------------------------WNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLL 162
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
+G A++ LR+F E+ N + TLT+VL C E++ L+ G Q+H+ G E
Sbjct: 163 HGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVE 219
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK---------MMEQS 356
+ ++ +SL+ +Y K G + A + + + + + +A+I+G+A + ++
Sbjct: 220 CDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRK 279
Query: 357 RDNLYACWNG-----------TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE 405
+ WN EAL LF+++ + + D T ++V++ C + G+
Sbjct: 280 SNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGK 338
Query: 406 QIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
Q+H K G + D++V ++L++MY KC S
Sbjct: 339 QMHCHACKFGLIDDIVVASTLLDMYSKCGS 368
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 117/233 (50%), Gaps = 4/233 (1%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN-TLAI 177
CG ++DA+R F+ + +++++W ++ G+ QN F +M H P+ +L+
Sbjct: 397 CGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM-HKLDLPTDEVSLSS 455
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
++AC S+ SL+ GEQ+ A +D D V ++L LY KCG +E + F + + +
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-H 296
+ W + IS +G+ + + +F +M ++P + T VL+ C +E G ++
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
SM G+ + + ++ L + G + EA L + M D W++++ G
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 98/232 (42%), Gaps = 53/232 (22%)
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
V N L +YS+ G++ A F + ++N SW I +SG+ LR F +
Sbjct: 64 VANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF------D 117
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
M P + GY N+ V + K G + A+
Sbjct: 118 MMPE----------------------------RDGYSWNVVVSG-----FAKAGELSVAR 144
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
LF M + +VT N+++ G+ N YA EAL LF +LN S D T
Sbjct: 145 RLFNAMPEKDVVTLNSLLHGYIL-------NGYA----EEALRLFKELNFSA---DAITL 190
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
++VL C + A G+QIHAQ + G D + +SL+N+Y KC + AS
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG +E RR FD M + + V W +++ GY N + A +F +M G P+ T +
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 178 ALNACTSLKSLKSGEQLHAYI-IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-E 235
L AC ++ G +L + + + D + + L ++ G +E A+ + + +
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD 616
Query: 236 KNVISWTAAISSC---GDSGKAKKGLRIFVEMLSEN 268
+ W++ + C G KK +E+ EN
Sbjct: 617 VDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPEN 652
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 199/457 (43%), Gaps = 97/457 (21%)
Query: 74 YIPLLQQCI-DKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM 132
Y+ L +C D+R +++HG I++ G D +CG+ + AR+ FD M
Sbjct: 8 YLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEM 67
Query: 133 -------------------------------PRRNVVAWTTLMLGYVQNSRPKHAFHVFD 161
P R+VV+W ++ V+ + A V+
Sbjct: 68 SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 127
Query: 162 EMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG 221
M+ G PS TLA L+AC+ + G + H +K +D + VGNAL S+Y+KCG
Sbjct: 128 RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 222 RL-EFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVL 280
+ ++ ++ F+ + + N +S+TA I K + +++F M + +Q + L+++L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 281 S-----QCC----EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
S + C EI ELG Q+H + +LG+ +L + NSLL +Y K + A+++F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 332 KGMDDASLVTWNAMIAGHAK---------MMEQSRDN------------LYAC------- 363
M + ++V+WN MI G + + + RD+ L AC
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 367
Query: 364 ----------------WNG-----------TEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
WN EA++ F ++ +K D T S +LS C
Sbjct: 368 TGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Query: 397 RMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
R+ G+QIH I+T + + + LI +Y +C
Sbjct: 428 RLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 13/280 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G++E RR F +P+ +V AW ++ GY + A F +M P TL++
Sbjct: 362 RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 421
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR-IKEK 236
L++C L+ L+ G+Q+H +I+ I ++ + + L ++YS+C ++E + F I E
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
++ W + IS + K L +F M + + PNE + +VLS C + L G Q
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H + K GY S+ V +L +Y K G I A+ F + + V WN MI G+
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYG---HN 598
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
R G EA+ L+ K+ SG K D TF SVL+ C
Sbjct: 599 GR--------GDEAVGLYRKMISSGEKPDGITFVSVLTAC 630
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 48/318 (15%)
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
+M A F MP NVV+W +++G+ Q R + M +G P+ T L
Sbjct: 299 DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
AC +SG+ +E + F I + +V +
Sbjct: 359 AC-----FRSGD------------------------------VETGRRIFSSIPQPSVSA 383
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W A +S + ++ + F +M +N++P++ TL+ +LS C ++FLE G Q+H +
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKG-MDDASLVTWNAMIAGHAKMMEQSRDN 359
+ N + + L+ +Y + + ++ +F +++ + WN+MI+G R N
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGF-------RHN 496
Query: 360 LYACWNGTEALNLFSKLNCSGMKL-DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
+ T+AL LF +++ + + + +F++VLS C R+ + + G Q H +K+G++S
Sbjct: 497 ML----DTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552
Query: 419 DVIVGTSLINMYIKCASV 436
D V T+L +MY KC +
Sbjct: 553 DSFVETALTDMYCKCGEI 570
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 6/265 (2%)
Query: 50 SRYRGFQEALSLAKE---GTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDX 106
S Y ++EA+S ++ + D + +L C R + +HG +++T ++
Sbjct: 392 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 107 XXXXXXXXXXXKCGNMEDARRAFDH-MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH 165
+C ME + FD + ++ W +++ G+ N A +F M
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 166 TGSY-PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLE 224
T P+ + A L++C+ L SL G Q H ++K D+ V AL +Y KCG ++
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEID 571
Query: 225 FALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCC 284
A + F + KN + W I G +G+ + + ++ +M+S +P+ T SVL+ C
Sbjct: 572 SARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631
Query: 285 EIQFLELGTQVHSMCTKL-GYESNL 308
+E G ++ S ++ G E L
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEPEL 656
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
N+ L K G +GEA +F GM + +V+WN MI+ + + + AL
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEK-----------ALV 124
Query: 372 LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYI 431
++ ++ C G FT +SVLS C +++ V G + H +KTG ++ VG +L++MY
Sbjct: 125 VYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA 184
Query: 432 KCASVV 437
KC +V
Sbjct: 185 KCGFIV 190
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 149/293 (50%), Gaps = 27/293 (9%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G +++AR+ FD P ++V WT ++ GY+QN + A +FD+M P N +
Sbjct: 262 QSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNE--V 313
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDF----DTSVGNALCSLYSKCGRLEFALKAFKRI 233
+ NA L GE++ + K D + S N + + Y++CG++ A F ++
Sbjct: 314 SWNAM--LAGYVQGERME--MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM 369
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT 293
+++ +SW A I+ SG + + LR+FV+M E + N + +S LS C ++ LELG
Sbjct: 370 PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGK 429
Query: 294 QVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMM 353
Q+H K GYE+ V N+LL +Y K G I EA LFK M +V+WN MIAG+
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY---- 485
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
SR G AL F + G+K D T +VLS C +G Q
Sbjct: 486 --SRHGF-----GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 128/252 (50%), Gaps = 7/252 (2%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+CG + +A+ FD MP+R+ V+W ++ GY Q+ A +F +M G + ++ +
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
AL+ C + +L+ G+QLH ++K + VGNAL +Y KCG +E A FK + K+
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VH 296
++SW I+ G + LR F M E ++P++ T+ +VLS C ++ G Q +
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA-----GHA 350
+M G N + ++ L + G + +A L K M + W ++ G+
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 351 KMMEQSRDNLYA 362
++ E + D ++A
Sbjct: 595 ELAETAADKIFA 606
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 157/319 (49%), Gaps = 31/319 (9%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G ++DAR FD MP +N V+W L+ YVQNS+ + A +F + S N L L
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-ENWALVSWNCL---L 226
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
K + Q + ++ D N + + Y++ G+++ A + F ++V
Sbjct: 227 GGFVKKKKIVEARQ---FFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM- 298
+WTA +S + ++ +F +M + NE + ++L+ + + +E+ ++ +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 299 -CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
C N+ N+++ Y + G I EA+ LF M V+W AMIAG++ QS
Sbjct: 339 PC------RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS----QSG 388
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
+ EAL LF ++ G +L+ +FSS LS C +VA G+Q+H + +K G+
Sbjct: 389 HSF-------EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 418 SDVIVGTSLINMYIKCASV 436
+ VG +L+ MY KC S+
Sbjct: 442 TGCFVGNALLLMYCKCGSI 460
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 50/256 (19%)
Query: 204 DFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVE 263
D D N S Y + GR AL+ FKR+ + +S+ IS +G+ + ++F E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 264 M-----LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLY 318
M +S N+ Y L + E+ E+ + +C+ N++L Y
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKAREL--FEIMPE-RDVCSW----------NTMLSGY 167
Query: 319 LKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--------MMEQSRDNL-YACWNG--- 366
+ GC+ +A+ +F M + + V+WNA+++ + + M+ +SR+N WN
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLG 227
Query: 367 --------TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA--QTIKTGF 416
EA F +N D+ +++++++ + Q +I Q
Sbjct: 228 GFVKKKKIVEARQFFDSMNVR----DVVSWNTIIT------GYAQSGKIDEARQLFDESP 277
Query: 417 LSDVIVGTSLINMYIK 432
+ DV T++++ YI+
Sbjct: 278 VQDVFTWTAMVSGYIQ 293
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 162/345 (46%), Gaps = 12/345 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H + ++ G D KCG +E A + F ++ R+VV+W+ ++ Y Q +
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A +F +M+ P+ TL L C + + + G+ +H Y IK I+ + A
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATA 441
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+ S+Y+KCGR ALKAF+R+ K+ +++ A G A K ++ M + P+
Sbjct: 442 VISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPD 501
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF- 331
T+ +L C G+ V+ K G++S V ++L+ ++ K + A +LF
Sbjct: 502 SRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD 561
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
K + S V+WN M+ G+ L+ EA+ F ++ + + TF ++
Sbjct: 562 KCGFEKSTVSWNIMMNGYL---------LHG--QAEEAVATFRQMKVEKFQPNAVTFVNI 610
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ + A G +H+ I+ GF S VG SL++MY KC +
Sbjct: 611 VRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMI 655
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 11/321 (3%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
C ++ A F+ + R++ +W T+M Y N + +FD M + + A A
Sbjct: 247 CADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASA 306
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L A + L G +H Y ++ + D SV +L S+YSKCG LE A + F I++++V
Sbjct: 307 LQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDV 366
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+SW+A I+S +G+ + + +F +M+ +++PN TLTSVL C + LG +H
Sbjct: 367 VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
K ES L +++ +Y K G A F+ + V +NA+ G+ ++ + ++
Sbjct: 427 AIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANK- 485
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
A +++ + G+ D T +L C + +G ++ Q IK GF S
Sbjct: 486 ----------AFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 419 DVIVGTSLINMYIKCASVVCA 439
+ V +LINM+ KC ++ A
Sbjct: 536 ECHVAHALINMFTKCDALAAA 556
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+LQ C + + +H + +K + KCG A +AF+ +P ++
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
VA+ L GY Q AF V+ M G P T+ L C G ++
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGKAK 255
IIK+ D + V +AL ++++KC L A+ F + EK+ +SW ++ G+A+
Sbjct: 527 QIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
+ + F +M E QPN T +++ E+ L +G VHS + G+ S V NSL+
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLV 646
Query: 316 YLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSK 375
+Y K G I ++ F + + +V+WN M++ +A L +C A++LF
Sbjct: 647 DMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAA------HGLASC-----AVSLFLS 695
Query: 376 LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+ + +K D +F SVLS C +G++I
Sbjct: 696 MQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 177/408 (43%), Gaps = 29/408 (7%)
Query: 43 FNTHLDP------SRYRGF------QEALS----LAKEGTEEVDSSFYIPLLQQCIDKRS 86
F++ DP S RG+ +EAL +++E + D + L+ C
Sbjct: 56 FDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMD 115
Query: 87 FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLG 146
F +H I + G D K ++ AR+ FD M ++VV W T++ G
Sbjct: 116 FKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSG 175
Query: 147 YVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFD 206
QN A +F +M +L + A + L+ LH +IK F
Sbjct: 176 LAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA 235
Query: 207 TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
S G L +Y C L A F+ + K+ SW +++ +G ++ L +F M +
Sbjct: 236 FSSG--LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293
Query: 267 ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
+++ N+ S L + L G +H + G ++ V SL+ +Y K G +
Sbjct: 294 YDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI 353
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
A+ LF ++D +V+W+AMIA + EQ+ + EA++LF + +K +
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASY----EQAGQH-------DEAISLFRDMMRIHIKPNAV 402
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
T +SVL C + A G+ IH IK S++ T++I+MY KC
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCG 450
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 3/280 (1%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
DS + +LQ C ++ V+G I+K G + KC + A F
Sbjct: 501 DSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLF 560
Query: 130 DHMP-RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
D ++ V+W +M GY+ + + + A F +M P+ T + A L +L
Sbjct: 561 DKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSAL 620
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
+ G +H+ +I+ T VGN+L +Y+KCG +E + K F I K ++SW +S+
Sbjct: 621 RVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAY 680
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKLGYESN 307
G A + +F+ M ++P+ + SVLS C +E G ++ M + E+
Sbjct: 681 AAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE 740
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMI 346
+ ++ L K G GEA + + M S+ W A++
Sbjct: 741 VEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 139/315 (44%), Gaps = 18/315 (5%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTLAIALNACT 183
+R FD + VV W +++ GY + + A F M G P + AL AC
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
K G ++H I + ++ D +G AL +Y K L A + F ++ K+V++W
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
+S +G + L +F +M S + + +L +++ +++ ++ +H + K G
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ + L+ +Y + A+ +F+ + +W M+A +A
Sbjct: 232 F--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH------------ 277
Query: 364 WNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
NG E L LF + ++++ +S L + V+G IH ++ G + DV
Sbjct: 278 -NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 422 VGTSLINMYIKCASV 436
V TSL++MY KC +
Sbjct: 337 VATSLMSMYSKCGEL 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
S L+ N L+ Y ++++F + D +V WN+MI G+ +R L+
Sbjct: 31 SGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGY------TRAGLH---- 80
Query: 366 GTEALNLFSKLNCS-GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
EAL F ++ G+ D ++F+ L C + F +G +IH + G SDV +GT
Sbjct: 81 -REALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 425 SLINMYIKCASVVCA 439
+L+ MY K +V A
Sbjct: 140 ALVEMYCKARDLVSA 154
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 129/231 (55%), Gaps = 2/231 (0%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
GN+E A F+ MP +++++WTT++ GY QN R + A VF +M+ G P T++ +
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+AC L L+ G+++H Y ++ D +G+AL +YSKCG LE AL F + +KN+
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH-SM 298
W + I G A++ L++F +M E+++PN T SV + C ++ G +++ SM
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
SN+ +++L+ K G I EA L M+ + + V W A++ G
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 50/293 (17%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G + +AR+ FD MP R+ +AWTT++ Y + V D S N+LA +
Sbjct: 918 GRIREARKVFDEMPERDDIAWTTMVSAYRR---------VLD-------MDSANSLANQM 961
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+ + + + N L + Y G LE A F ++ K++I
Sbjct: 962 S-----------------------EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDII 998
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
SWT I + + ++ + +F +M+ E + P+E T+++V+S C + LE+G +VH
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+ G+ ++ + ++L+ +Y K G + A ++F + +L WN++I G
Sbjct: 1059 LQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG----------- 1107
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
L A EAL +F+K+ +K + TF SV + C +G +I+ I
Sbjct: 1108 LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 1160
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 52/306 (16%)
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS 190
M NV + L G+V S P + ++ ML PS T + +L +S S +
Sbjct: 830 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYS-SLVKASSFAS-RF 887
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
GE L A+I K+ F + L YS GR+ A K F + E++ I+WT +S+
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSA--- 944
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
R ++M S N N+ + E N
Sbjct: 945 -------YRRVLDMDSANSLANQMS-----------------------------EKNEAT 968
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
N L+ Y+ G + +A+ LF M +++W MI G+ S++ Y EA+
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY------SQNKRY-----REAI 1017
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
+F K+ G+ D T S+V+S C + G+++H T++ GF+ DV +G++L++MY
Sbjct: 1018 AVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMY 1077
Query: 431 IKCASV 436
KC S+
Sbjct: 1078 SKCGSL 1083
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH + ++ G D KCG++E A F ++P++N+ W +++ G +
Sbjct: 1054 VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGF 1113
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII-KYHIDFDTSVGN 211
+ A +F +M P+ T ACT + G +++ +I Y I +
Sbjct: 1114 AQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYG 1173
Query: 212 ALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSC 248
+ L+SK G + AL+ ++ E N + W A + C
Sbjct: 1174 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGC 1211
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 16/321 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG + DA + FD MP R+V++ + G+++N + F + ML +G + TL I
Sbjct: 102 KCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA-TLTI 160
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+ C + + + +HA I D + SVGN L + Y KCG F + +N
Sbjct: 161 VLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRN 220
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
VI+ TA IS ++ + GLR+F M + PN T S L+ C Q + G Q+H+
Sbjct: 221 VITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHA 280
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
+ K G ES L + ++L+ +Y K G I +A +F+ + V+ ++ G A+
Sbjct: 281 LLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ------ 334
Query: 358 DNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
NG+ EA+ F ++ +G+++D S+VL V + G+Q+H+ IK
Sbjct: 335 -------NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK 387
Query: 416 FLSDVIVGTSLINMYIKCASV 436
F + V LINMY KC +
Sbjct: 388 FSGNTFVNNGLINMYSKCGDL 408
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 11/318 (3%)
Query: 90 TQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQ 149
T+++H + +G ++ KCG R FD M RNV+ T ++ G ++
Sbjct: 174 TKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIE 233
Query: 150 NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
N + +F M +P+ T AL AC+ + + G+Q+HA + KY I+ + +
Sbjct: 234 NELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCI 293
Query: 210 GNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
+AL +YSKCG +E A F+ E + +S T + +G ++ ++ F+ ML +
Sbjct: 294 ESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV 353
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
+ + +++VL L LG Q+HS+ K + N V N L+ +Y K G + ++Q
Sbjct: 354 EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 330 LFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFS 389
+F+ M + V+WN+MIA A+ +G AL L+ ++ +K TF
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARH-----------GHGLAALKLYEEMTTLEVKPTDVTFL 462
Query: 390 SVLSVCGRMVAFVQGEQI 407
S+L C + +G ++
Sbjct: 463 SLLHACSHVGLIDKGREL 480
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXK 118
SL + G +S Y+ L C + + Q +H + K G + K
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
CG++EDA F+ + V+ T +++G QN + A F ML G N ++
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L SL G+QLH+ +IK +T V N L ++YSKCG L + F+R+ ++N
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+SW + I++ G L+++ EM + ++P + T S+L C + ++ G ++
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 22/256 (8%)
Query: 191 GEQLHAYIIK-----YHIDFDTS-----VGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
G LHA IIK +D D V N+L SLY+KCG+L A+K F + ++VIS
Sbjct: 64 GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS 123
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
+ + + G + ML + TLT VLS C +F + +H++
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAI 182
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
GY+ + V N L+ Y K GC + +F GM +++T A+I+G ++E
Sbjct: 183 LSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISG---LIENELHE- 238
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
+ L LFS + + + T+ S L+ C V+G+QIHA K G S++
Sbjct: 239 -------DGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESEL 291
Query: 421 IVGTSLINMYIKCASV 436
+ ++L++MY KC S+
Sbjct: 292 CIESALMDMYSKCGSI 307
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCID----------KRSFSDTQI-----VHGHIMKTGNH 103
+ LA+ G+EE F+I +LQ ++ SF D + +H ++K
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS 389
Query: 104 EDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM 163
+ KCG++ D++ F MP+RN V+W +++ + ++ A +++EM
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Query: 164 LHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGNALCSLYSKCGR 222
P+ T L+AC+ + + G +L + + H I+ T + + + G
Sbjct: 450 TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGL 509
Query: 223 LEFALKAFKRIKEK-NVISWTAAISSCGDSGKAKKG 257
L+ A + K + W A + +C G + G
Sbjct: 510 LKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVG 545
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 208/470 (44%), Gaps = 74/470 (15%)
Query: 19 FKKYPPSSIPIDKGQNISLQKSHKFNTHLDPSRYR-GFQEALSLAKEGTEEVDSSFYIPL 77
+++PPS + SL +S+ N + Y G +LS D+ + +
Sbjct: 82 LRRFPPSDAGVYHWN--SLIRSYGDNGCANKCLYLFGLMHSLSWTP------DNYTFPFV 133
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
+ C + S + H + TG + +C ++ DAR+ FD M +V
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHT-GSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V+W +++ Y + +PK A +F M + G P TL L C SL + G+QLH
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCG-------------------------------RLEF 225
+ + + + VGN L +Y+KCG R E
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 226 ALKAFKRIKEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
A++ F++++E+ +V++W+AAIS G + L + +MLS ++PNE TL SVLS
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 282 QCCEIQFLELGTQVHSMCTKLGYESNLR---------VRNSLLYLYLKRGCIGEAQILFK 332
C + L G ++H C + Y +LR V N L+ +Y K + A+ +F
Sbjct: 374 GCASVGALMHGKEIH--CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 333 GMD--DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL---NCSGMKLDLFT 387
+ + +VTW MI G+++ + ++ AL L S++ +C + + FT
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANK-----------ALELLSEMFEEDCQ-TRPNAFT 479
Query: 388 FSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS-DVIVGTSLINMYIKCASV 436
S L C + A G+QIHA ++ + + V LI+MY KC S+
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 120 GNMEDARRAFDHMP----RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G EDA R F+ M + +VV W+ + GY Q A V +ML +G P+ TL
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDF-------DTSVGNALCSLYSKCGRLEFALK 228
L+ C S+ +L G+++H Y IKY ID + V N L +Y+KC +++ A
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 229 AFKRI--KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ--PNEYTLTSVLSQCC 284
F + KE++V++WT I G A K L + EM E+ Q PN +T++ L C
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 285 EIQFLELGTQVHSMCTKLGYES-NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWN 343
+ L +G Q+H+ + + L V N L+ +Y K G I +A+++F M + VTW
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 344 AMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ 403
+++ G+ G EAL +F ++ G KLD T VL C Q
Sbjct: 549 SLMTGYGMHGY-----------GEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 404 GEQIHAQTIKTGF 416
G + + +KT F
Sbjct: 598 GME-YFNRMKTVF 609
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 15/252 (5%)
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI--KEKNVISWTA 243
K++ + +H ++ + I ++ + L S Y G L A+ +R + V W +
Sbjct: 39 KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I S GD+G A K L +F M S + P+ YT V C EI + G H++ G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ SN+ V N+L+ +Y + + +A+ +F M +V+WN++I +AK+ +
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK------- 210
Query: 364 WNGTEALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIV 422
AL +FS++ N G + D T +VL C + G+Q+H + + + ++ V
Sbjct: 211 ----VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 423 GTSLINMYIKCA 434
G L++MY KC
Sbjct: 267 GNCLVDMYAKCG 278
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG++ DAR FD+M +N V WT+LM GY + + A +FDEM G TL +
Sbjct: 525 KCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG----NALCSLYSKCGRLEFALKAFKRI 233
L AC+ + G + Y + F S G L L + GRL AL+ + +
Sbjct: 585 VLYACSHSGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 234 K-EKNVISWTAAISSCGDSGKAKKG 257
E + W A +S C GK + G
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELG 666
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 153/305 (50%), Gaps = 21/305 (6%)
Query: 140 WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII 199
W L+ V+++ + A + +M+ G P L A L+ ++ G+Q+HA++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 200 KYHIDFDT-SVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGL 258
K+ D+ +V N L +LY KCG K F RI E+N +SW + ISS K + L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 259 RIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE---LGTQVHSMCTKLGYESNLRVRNSLL 315
F ML EN++P+ +TL SV++ C + E +G QVH+ + G E N + N+L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 316 YLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT--EALNLF 373
+Y K G + +++L LVTWN +++ C N EAL
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS-------------LCQNEQLLEALEYL 290
Query: 374 SKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD-VIVGTSLINMYIK 432
++ G++ D FT SSVL C + G+++HA +K G L + VG++L++MY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 433 CASVV 437
C V+
Sbjct: 351 CKQVL 355
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 157/323 (48%), Gaps = 10/323 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G + ++ R++V W T++ QN + A EM+ G P T++
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 178 ALNACTSLKSLKSGEQLHAYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
L AC+ L+ L++G++LHAY +K +D ++ VG+AL +Y C ++ + F + ++
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+ W A I+ + K+ L +F+ M S + N T+ V+ C +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H K G + + V+N+L+ +Y + G I A +F M+D LVTWN MI G+ E
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV-FSEH 486
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDL----FTFSSVLSVCGRMVAFVQGEQIHAQT 411
D L + NL K++ ++ L T ++L C + A +G++IHA
Sbjct: 487 HEDALLLL---HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 412 IKTGFLSDVIVGTSLINMYIKCA 434
IK +DV VG++L++MY KC
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCG 566
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 18/376 (4%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXX-XKCGNMEDARRA 128
D+ + LL+ D + + +H H+ K G D KCG+ +
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL--- 185
FD + RN V+W +L+ + + A F ML PS TL + AC++L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
+ L G+Q+HAY ++ + ++ + N L ++Y K G+L + +++++W +
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG-Y 304
SS + + + L EM+ E ++P+E+T++SVL C ++ L G ++H+ K G
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
+ N V ++L+ +Y + + +F GM D + WNAMIAG++ + D
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS---QNEHDK----- 386
Query: 365 NGTEALNLFSKLNCS-GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
EAL LF + S G+ + T + V+ C R AF + E IH +K G D V
Sbjct: 387 ---EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 424 TSLINMYIKCASVVCA 439
+L++MY + + A
Sbjct: 444 NTLMDMYSRLGKIDIA 459
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 149/316 (47%), Gaps = 24/316 (7%)
Query: 93 VHGHIMKTGN-HEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
+H + +K G+ E+ C + RR FD M R + W ++ GY QN
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 152 RPKHAFHVFDEMLHT-GSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
K A +F M + G + T+A + AC + E +H +++K +D D V
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS---- 266
N L +YS+ G+++ A++ F +++++++++W I+ S + L + +M +
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 267 -------ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYL 319
+++PN TL ++L C + L G ++H+ K +++ V ++L+ +Y
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 320 KRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCS 379
K GC+ ++ +F + +++TWN +I + NG EA++L +
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH-----------GNGQEAIDLLRMMMVQ 612
Query: 380 GMKLDLFTFSSVLSVC 395
G+K + TF SV + C
Sbjct: 613 GVKPNEVTFISVFAAC 628
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 12/270 (4%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
++ C+ +FS + +HG ++K G D + G ++ A R F M R+
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEM------LHTGS-----YPSMNTLAIALNACTSL 185
+V W T++ GYV + + A + +M + G+ P+ TL L +C +L
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
+L G+++HAY IK ++ D +VG+AL +Y+KCG L+ + K F +I +KNVI+W I
Sbjct: 531 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 590
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKLGY 304
+ G G ++ + + M+ + ++PNE T SV + C ++ G ++ + M G
Sbjct: 591 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 650
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
E + ++ L + G I EA L M
Sbjct: 651 EPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 11/303 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H +++TG E G+M AR+ FD M + + W TL GYV+N
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
P + ++ +M G P T + A + L G LHA+++KY V
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L +Y K G L A F+ ++ K++++W A ++ C +G + L F +M ++ +Q +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
+T+ S+LS C ++ LE+G +++ K + N+ V N+ L ++LK G A++LF+
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
M ++V+W+ MI G+A M SR EAL LF+ + G++ + TF VL
Sbjct: 270 EMKQRNVVSWSTMIVGYA-MNGDSR----------EALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 393 SVC 395
S C
Sbjct: 319 SAC 321
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC 248
K +++HA +++ S+ L G + +A + F + + + W
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+ + L ++ +M ++P+E+T V+ ++ G +H+ K G+
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
V L+ +Y+K G + A+ LF+ M LV WNA +A + N
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ-----------TGNSAI 193
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
AL F+K+ ++ D FT S+LS CG++ + GE+I+ + K ++IV + ++
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 429 MYIKCASVVCA 439
M++KC + A
Sbjct: 254 MHLKCGNTEAA 264
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 182/373 (48%), Gaps = 21/373 (5%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
+ D+ Y +++ S + + +H ++K G D K G DA +
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
F+ MP R++V+W +++ GY+ + +F EML G P + AL AC+ + S
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 188 LKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
K G+++H + ++ I+ D V ++ +YSK G + +A + F + ++N+++W I
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 247 SCGDSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
+G+ F +M +N +QP+ T ++L ++ G +H + G+
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFL 362
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
++ + +L+ +Y + G + A+++F M + ++++WN++IA + + N
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ-------------N 409
Query: 366 GTE--ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
G AL LF +L S + D T +S+L ++ +G +IHA +K+ + S+ I+
Sbjct: 410 GKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL 469
Query: 424 TSLINMYIKCASV 436
SL++MY C +
Sbjct: 470 NSLVHMYAMCGDL 482
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 157/322 (48%), Gaps = 21/322 (6%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
MEDA + FD M + + W ++ G+ A + M+ G T + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+ SL+ G+++HA +IK D V N+L SLY K G A K F+ + E++++SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ IS G L +F EML +P+ ++ S L C + ++G ++H +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 302 LGYES-NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
E+ ++ V S+L +Y K G + A+ +F GM ++V WN MI +A+
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR--------- 310
Query: 361 YACWNG--TEALNLFSKLN-CSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
NG T+A F K++ +G++ D+ T ++L A ++G IH ++ GFL
Sbjct: 311 ----NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFL 362
Query: 418 SDVIVGTSLINMYIKCASVVCA 439
+++ T+LI+MY +C + A
Sbjct: 363 PHMVLETALIDMYGECGQLKSA 384
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 16/279 (5%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTLA 176
K G + A R F+ M +RN+VAW ++ Y +N R AF F +M G P + T
Sbjct: 279 KYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
L A L+ G +H Y ++ + AL +Y +CG+L+ A F R+ EK
Sbjct: 339 NLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK 394
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
NVISW + I++ +GK L +F E+ ++ P+ T+ S+L E L G ++H
Sbjct: 395 NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIH 454
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
+ K Y SN + NSL+++Y G + +A+ F + +V+WN++I +A
Sbjct: 455 AYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYA------ 508
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
G ++ LFS++ S + + TF+S+L+ C
Sbjct: 509 -----VHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 89 DTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYV 148
+ + +HG+ M+ G +CG ++ A FD M +NV++W +++ YV
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
QN + A +F E+ + P T+A L A SL G ++HAYI+K +T
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
+ N+L +Y+ CG LE A K F I K+V+SW + I + G + + +F EM++
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR 527
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEA 327
+ PN+ T S+L+ C ++ G + SM + G + + +L L + G A
Sbjct: 528 VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587
Query: 328 QILFKGM 334
+ + M
Sbjct: 588 KRFLEEM 594
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 167/351 (47%), Gaps = 22/351 (6%)
Query: 87 FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLG 146
SD + HG ++K G + K +DA + FD MP RN+V W L+ G
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 147 YVQ-----NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKY 201
+Q N R F +L T + + CT ++K+G QLH ++K
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 202 HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIF 261
++ +L Y KCG + A + F+ + +++++ W A +SS +G + +
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL 231
Query: 262 VEMLSE--NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYL 319
M S+ + + +T +S+LS C +E G Q+H++ K+ Y+ ++ V +LL +Y
Sbjct: 232 KLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYA 287
Query: 320 KRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCS 379
K + +A+ F+ M ++V+WNAMI G A+ E G EA+ LF ++
Sbjct: 288 KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE-----------GREAMRLFGQMLLE 336
Query: 380 GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
++ D TF+SVLS C + A + +Q+ A K G + V SLI+ Y
Sbjct: 337 NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSY 387
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 24/332 (7%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
+D ++ L++ C D + +H ++K G KCG + +ARR
Sbjct: 140 LDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRV 199
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVF-----DEMLHTGSYPSMNTLAIALNACT 183
F+ + R++V W L+ YV N AF + D+ G Y + ++L L+AC
Sbjct: 200 FEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSL---LSAC- 255
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
++ G+Q+HA + K FD V AL ++Y+K L A + F+ + +NV+SW A
Sbjct: 256 ---RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNA 312
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I +G+ ++ +R+F +ML EN+QP+E T SVLS C + + QV +M TK G
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
L V NSL+ Y + G + EA + F + + LV+W ++I L +
Sbjct: 373 SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGA-----------LASH 421
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
E+L +F + ++ D TF VLS C
Sbjct: 422 GFAEESLQMFESM-LQKLQPDKITFLEVLSAC 452
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 116/244 (47%), Gaps = 4/244 (1%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H + K D K ++ DAR F+ M RNVV+W +++G+ QN
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE 322
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKY-HIDFDTSVGN 211
+ A +F +ML P T A L++C ++ +Q+ A + K DF SV N
Sbjct: 323 GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF-LSVAN 381
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
+L S YS+ G L AL F I+E +++SWT+ I + G A++ L++F ML + +QP
Sbjct: 382 SLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKLQP 440
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKL-GYESNLRVRNSLLYLYLKRGCIGEAQIL 330
++ T VLS C ++ G + T+ E+ L+ L + G I EA +
Sbjct: 441 DKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDV 500
Query: 331 FKGM 334
M
Sbjct: 501 LNSM 504
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 26/258 (10%)
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT- 242
SL L +Q H +++K I + N L Y+K + A K F + +N+++W
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNI 107
Query: 243 ---AAISSCGDSG-KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
I GD+ +A G +L ++ + + ++ C + ++ G Q+H +
Sbjct: 108 LIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCL 167
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
K G ES+ SL++ Y K G I EA+ +F+ + D LV WNA+++ +
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYV-------- 219
Query: 359 NLYACWNG--TEALNLFSKLNCSGMKL--DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
NG EA L + + D FTFSS+LS C QG+QIHA K
Sbjct: 220 -----LNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKV 270
Query: 415 GFLSDVIVGTSLINMYIK 432
+ D+ V T+L+NMY K
Sbjct: 271 SYQFDIPVATALLNMYAK 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 294 QVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMM 353
Q H K G ++L ++N LL Y K +A LF M ++VTWN +I G +
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 354 EQS--RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
+ R +L C+ S++ + + LD +F ++ +C G Q+H
Sbjct: 117 GDTNHRAHLGFCY--------LSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLM 168
Query: 412 IKTGFLSDVIVGTSLINMYIKCASVVCA 439
+K G S TSL++ Y KC +V A
Sbjct: 169 VKQGLESSCFPSTSLVHFYGKCGLIVEA 196
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 16/326 (4%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
DS+ Y L++ CI R+ + ++ H+ G+ K + DA + F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D MP+RNV++WTT++ Y + + A + ML P++ T + L +C + ++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
LH IIK ++ D V +AL +++K G E AL F + + I W + I
Sbjct: 180 ---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
+ ++ L +F M + TLTSVL C + LELG Q H K Y+ +L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
+ N+L+ +Y K G + +A +F M + ++TW+ MI+G A+ N Y+ EA
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ-------NGYS----QEA 343
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVC 395
L LF ++ SG K + T VL C
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFAC 369
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 7/277 (2%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y +L+ C SD +++H I+K G D K G EDA FD M
Sbjct: 165 YSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+ + W +++ G+ QNSR A +F M G TL L ACT L L+ G Q
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
H +I+KY D D + NAL +Y KCG LE AL+ F ++KE++VI+W+ IS +G
Sbjct: 282 AHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL-GYESNLRVRN 312
+++ L++F M S +PN T+ VL C LE G KL G +
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 313 SLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
++ L K G + +A L M+ + VTW ++
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
Q P+ A D + G + T + + C S +++ G +I H+ F+
Sbjct: 39 QRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGN-----LICRHLYFNGH 92
Query: 209 -----VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVE 263
+ N L ++Y K L A + F ++ ++NVISWT IS+ +K L + V
Sbjct: 93 RPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVL 152
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
ML +N++PN YT +SVL C + + + +H K G ES++ VR++L+ ++ K G
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKL 383
+A +F M + WN++I G A + SR ++ AL LF ++ +G
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFA---QNSRSDV--------ALELFKRMKRAGFIA 258
Query: 384 DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ T +SVL C + G Q H +K + D+I+ +L++MY KC S+
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSL 309
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 1/229 (0%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
+ +++ C D + + VH H + +G D KCG+ME AR+ FD MP
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP 169
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+++VAW +L+ G+ QN A VF +M +G P T L+AC ++ G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H YII +D + +G AL +LYS+CG + A + F ++KE NV +WTA IS+ G G
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 254 AKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
++ + +F +M + PN T +VLS C +E G V+ TK
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK 338
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 134/264 (50%), Gaps = 14/264 (5%)
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
P H + ML + PS T + +C L +L+ G+ +H + + DT V A
Sbjct: 88 PLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAA 147
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L + YSKCG +E A + F R+ EK++++W + +S +G A + +++F +M +P+
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
T S+LS C + + LG+ VH G + N+++ +L+ LY + G +G+A+ +F
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL--NCSGMKLDLFTFSS 390
M + ++ W AMI+ + G +A+ LF+K+ +C + ++ TF +
Sbjct: 268 KMKETNVAAWTAMISAYGTH-----------GYGQQAVELFNKMEDDCGPIPNNV-TFVA 315
Query: 391 VLSVCGRMVAFVQGEQIHAQTIKT 414
VLS C +G ++ + K+
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKS 339
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 261 FVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLK 320
+ MLS N+ P+ YT TSV+ C ++ L +G VH G+ + V+ +L+ Y K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 321 RGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNC 378
G + A+ +F M + S+V WN++++G EQ NG EA+ +F ++
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSG----FEQ---------NGLADEAIQVFYQMRE 201
Query: 379 SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
SG + D TF S+LS C + A G +H I G +V +GT+LIN+Y +C V
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 157/324 (48%), Gaps = 23/324 (7%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG---SYPSMNTLAIALNACTSLKSLKSGE 192
N+ +W + G+ ++ PK +F ++ +ML G S P T + C L+ G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
+ +++K ++ + V NA +++ CG +E A K F ++++SW I+ G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
+A+K + ++ M SE ++P++ T+ ++S C + L G + + + G + + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA---------KMMEQSRDNLYAC 363
+L+ ++ K G I EA+ +F ++ ++V+W MI+G+A K+ + +
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 364 WN-----------GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
WN G +AL LF ++ S K D T LS C ++ A G IH
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 413 KTGFLSDVIVGTSLINMYIKCASV 436
K +V +GTSL++MY KC ++
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNI 440
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 42/357 (11%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D Y L + C D R S ++ GH++K CG+ME+AR+ F
Sbjct: 155 DHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVF 214
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D P R++V+W L+ GY + + A +V+ M G P T+ +++C+ L L
Sbjct: 215 DESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLN 274
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS-- 247
G++ + Y+ + + + NAL ++SKCG + A + F ++++ ++SWT IS
Sbjct: 275 RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYA 334
Query: 248 --------------------------CGDSGKAKKG---LRIFVEMLSENMQPNEYTLTS 278
G S +AK+G L +F EM + N +P+E T+
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 279 VLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDAS 338
LS C ++ L++G +H K N+ + SL+ +Y K G I EA +F G+ +
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN 454
Query: 339 LVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+T+ A+I G A L+ + + A++ F+++ +G+ D TF +LS C
Sbjct: 455 SLTYTAIIGGLA---------LHG--DASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 2/233 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+CG ++ +R+ FD M ++VV W ++ G VQ R + A +F EM + + P T+
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC+ L +L G +H YI KY + + ++G +L +Y+KCG + AL F I+ +N
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN 454
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+++TA I G A + F EM+ + P+E T +LS CC ++ G S
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS 514
Query: 298 -MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
M ++ L+ + ++ L + G + EA L + M +A W A++ G
Sbjct: 515 QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFG 567
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 21/277 (7%)
Query: 166 TGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN---ALCSLYSKCGR 222
T S+ N L L C L LK Q+ A +I + D + A C+L S+
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLK---QIQAQMIINGLILDPFASSRLIAFCAL-SESRY 102
Query: 223 LEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSE---NMQPNEYTLTSV 279
L++++K K I+ N+ SW I +S K+ ++ +ML +P+ +T +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 280 LSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL 339
C +++ LG + KL E V N+ ++++ G + A+ +F L
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 340 VTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMV 399
V+WN +I G+ K+ E + A+ ++ + G+K D T ++S C +
Sbjct: 223 VSWNCLINGYKKIGEAEK-----------AIYVYKLMESEGVKPDDVTMIGLVSSCSMLG 271
Query: 400 AFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+G++ + + G + + +L++M+ KC +
Sbjct: 272 DLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 148/298 (49%), Gaps = 25/298 (8%)
Query: 122 MEDARRAFDHMPRR-NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIAL 179
M A + F + + NV W TL+ GY + AF ++ EM +G P +T +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
A T++ ++ GE +H+ +I+ V N+L LY+ CG + A K F ++ EK+++
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
+W + I+ ++GK ++ L ++ EM S+ ++P+ +T+ S+LS C +I L LG +VH
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
K+G NL N LL LY + G + EA+ LF M D + V+W ++I G
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG----------- 297
Query: 360 LYACWNGTEALNLFSKLNCS-GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
L G EA+ LF + + G+ TF +L C H +K GF
Sbjct: 298 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-----------HCGMVKEGF 344
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 151/338 (44%), Gaps = 13/338 (3%)
Query: 24 PSSIPIDKGQNISLQKSHKFNTHLDPSRYRGFQE------ALSLAKE----GTEEVDSSF 73
PS P+ + + N + + RG+ E A SL +E G E D+
Sbjct: 64 PSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHT 123
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y L++ + +H ++++G CG++ A + FD MP
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+++VAW +++ G+ +N +P+ A ++ EM G P T+ L+AC + +L G++
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H Y+IK + + N L LY++CGR+E A F + +KN +SWT+ I +G
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 303
Query: 254 AKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESNLRVR 311
K+ + +F M S E + P E T +L C ++ G + M + E +
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF 363
Query: 312 NSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
++ L + G + +A K M ++V W ++
Sbjct: 364 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 23/269 (8%)
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDF-DTSVGN----ALCSLYSKCGRLEFALKAFK 231
I L + S+ Q+HA+ I++ + D +G L SL S + +A K F
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFS 77
Query: 232 RI-KEKNVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFL 289
+I K NV W I + G + ++ EM +S ++P+ +T ++ + +
Sbjct: 78 KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
LG +HS+ + G+ S + V+NSLL+LY G + A +F M + LV WN++I G
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 350 AKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
A+ NG EAL L++++N G+K D FT S+LS C ++ A G+++
Sbjct: 198 AE-------------NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 408 HAQTIKTGFLSDVIVGTSLINMYIKCASV 436
H IK G ++ L+++Y +C V
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 136/281 (48%), Gaps = 17/281 (6%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G +AR FD MP RN+V+W ++ GYV A M TL L
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWIL 402
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE-KNV 238
N C+ + ++ G+Q H +I ++ D + V NAL +Y KCG L+ A F+++ E ++
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+SW A ++ G++++ L F M E +P++YTL ++L+ C I L LG +H
Sbjct: 463 VSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGF 521
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
+ GY+ ++ +R +++ +Y K C A +FK L+ WN++I G
Sbjct: 522 LIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRG---------- 571
Query: 359 NLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
C NG E LF L G+K D TF +L C R
Sbjct: 572 ---CCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIR 609
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 184/440 (41%), Gaps = 45/440 (10%)
Query: 32 GQNISLQKSHKFNTHLDPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQ 91
G L + + HL+ +A+S+ E V Y L + C K +
Sbjct: 25 GTGTKLTVTRQILEHLEGG---NVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQAR 81
Query: 92 IVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
V H++ KCG ++DAR F+ MP R+ +W ++ QN
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
F +F M G + + A L +C + L+ QLH ++KY + +
Sbjct: 142 VSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLET 201
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
++ +Y KC + A + F I + +SW + + G + + +F +ML N++P
Sbjct: 202 SIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLK----------- 320
+T++SV+ C LE+G +H++ KL ++ V S+ +Y+K
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 321 --------------------RGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
G EA+ LF M + ++V+WNAM+ G+ E
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHE------ 375
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
W+ EAL+ + + +D T +L+VC + G+Q H + G+ ++V
Sbjct: 376 ---WD--EALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNV 430
Query: 421 IVGTSLINMYIKCASVVCAS 440
IV +L++MY KC ++ A+
Sbjct: 431 IVANALLDMYGKCGTLQSAN 450
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 184/411 (44%), Gaps = 45/411 (10%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
F+ + ++G ++SF +L+ C + +H ++K G +
Sbjct: 147 FRMFRRMNRDGVRATETSF-AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVD 205
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
KC M DARR FD + + V+W ++ Y++ A +F +ML P +T
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
++ + AC+ +L+ G+ +HA +K + DT V ++ +Y KC RLE A + F + +
Sbjct: 266 VSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 235 -------------------------------EKNVISWTAAISSCGDSGKAKKGLRIFVE 263
E+N++SW A + + + + L
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
M E + TL +L+ C I +++G Q H + GY++N+ V N+LL +Y K G
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 324 IGEAQILFKGMDD-ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMK 382
+ A I F+ M + V+WNA++ G A++ +AL+ F + K
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSE-----------QALSFFEGMQVEA-K 493
Query: 383 LDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
+T +++L+ C + A G+ IH I+ G+ DV++ ++++MY KC
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKC 544
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 9/271 (3%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQI---VHGHIMKTGNHEDXXXXXXXXXX 115
L+L ++ E +D+ + +L C SD Q+ HG I + G +
Sbjct: 383 LTLMRQEIENIDNVTLVWILNVC---SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDM 439
Query: 116 XXKCGNMEDARRAFDHMPR-RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
KCG ++ A F M R+ V+W L+ G + R + A F+ M + PS T
Sbjct: 440 YGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYT 498
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
LA L C ++ +L G+ +H ++I+ D + A+ +YSKC ++A++ FK
Sbjct: 499 LATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA 558
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+++I W + I C +G++K+ +F+ + +E ++P+ T +L C +ELG Q
Sbjct: 559 TRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQ 618
Query: 295 -VHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
SM TK + + ++ LY K GC+
Sbjct: 619 YFSSMSTKYHISPQVEHYDCMIELYCKYGCL 649
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 161/351 (45%), Gaps = 11/351 (3%)
Query: 89 DTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYV 148
+TQ +H + K+ D ++ AR+ FD P R+V W +++ Y
Sbjct: 23 NTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
+ + +F ++L + + P T A + K +H I + FD
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
G+A+ YSK G + A K F I + ++ W I G G KG+ +F M
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
QPN YT+ ++ S + L + VH+ C K+ +S+ V +L+ +Y + CI A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
+F + + LV +++I G+++ C N EAL+LF++L SG K D
Sbjct: 263 SVFNSISEPDLVACSSLITGYSR-----------CGNHKEALHLFAELRMSGKKPDCVLV 311
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+ VL C + V G+++H+ I+ G D+ V ++LI+MY KC + CA
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+C + A F+ + ++VA ++L+ GY + K A H+F E+ +G P +AI
Sbjct: 254 RCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L +C L SG+++H+Y+I+ ++ D V +AL +YSKCG L+ A+ F I EKN
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-H 296
++S+ + I G G A F E+L + P+E T +++L CC L G ++
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 297 SMCTKLGYE 305
M ++ G E
Sbjct: 434 RMKSEFGIE 442
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 153/329 (46%), Gaps = 17/329 (5%)
Query: 85 RSFSDT------QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVV 138
R FS++ + +HG + +G D K G + +A + F +P ++
Sbjct: 114 RGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLA 173
Query: 139 AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYI 198
W ++LGY ++F+ M H G P+ T+ + L +HA+
Sbjct: 174 LWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFC 233
Query: 199 IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGL 258
+K ++D + VG AL ++YS+C + A F I E ++++ ++ I+ G K+ L
Sbjct: 234 LKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEAL 293
Query: 259 RIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLY 318
+F E+ +P+ + VL C E+ G +VHS +LG E +++V ++L+ +Y
Sbjct: 294 HLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMY 353
Query: 319 LKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNC 378
K G + A LF G+ + ++V++N++I G L + A F+++
Sbjct: 354 SKCGLLKCAMSLFAGIPEKNIVSFNSLILG-----------LGLHGFASTAFEKFTEILE 402
Query: 379 SGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
G+ D TFS++L C +G++I
Sbjct: 403 MGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 167/355 (47%), Gaps = 25/355 (7%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
+++HG + G + K +EDAR+ FD MP ++ + W T++ GY +N
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 151 SRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK---YHIDFD 206
+ VF ++++ + TL L A L+ L+ G Q+H+ K Y D+
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY- 257
Query: 207 TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
V SLYSKCG+++ F+ ++ +++++ A I +G+ + L +F E++
Sbjct: 258 --VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 267 ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
+ TL S++ + + +H C K + S+ V +L +Y K I
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLD 384
A+ LF + SL +WNAMI+G+ + NG +A++LF ++ S +
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQ-------------NGLTEDAISLFREMQKSEFSPN 419
Query: 385 LFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
T + +LS C ++ A G+ +H T F S + V T+LI MY KC S+ A
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 163/357 (45%), Gaps = 15/357 (4%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
L E +D++ + +L + + +H KTG + KCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
++ F + ++VA+ ++ GY N + + +F E++ +G+ +TL +
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
L + + +H Y +K + SV AL ++YSK +E A K F EK++ S
Sbjct: 331 VSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W A IS +G + + +F EM PN T+T +LS C ++ L LG VH +
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
+ES++ V +L+ +Y K G I EA+ LF M + VTWN MI+G+ L
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG---------L 498
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI-KTGF 416
+ G EALN+F ++ SG+ TF VL C +G++I I + GF
Sbjct: 499 HG--QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 165/361 (45%), Gaps = 20/361 (5%)
Query: 84 KRSFSDTQI--VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWT 141
KRS S + + H I+ G D G + AR F + R +V +
Sbjct: 28 KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFN 87
Query: 142 TLMLGYVQNSRPKHAFHVFDEMLH-TGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK 200
LM G+ N P + VF + T P+ +T A A++A + + ++G +H +
Sbjct: 88 VLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV 147
Query: 201 YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRI 260
D + +G+ + +Y K R+E A K F R+ EK+ I W IS + + +++
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 261 FVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYL 319
F ++++E+ + + TL +L E+Q L LG Q+HS+ TK G S+ V + LY
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 320 KRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE-ALNLFSKLNC 378
K G I LF+ +V +NAMI G+ E TE +L+LF +L
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE------------TELSLSLFKELML 315
Query: 379 SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVC 438
SG +L T S++ V G ++ IH +K+ FLS V T+L +Y K +
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 439 A 439
A
Sbjct: 373 A 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 16/277 (5%)
Query: 166 TGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEF 225
T + S NT TS+ L Q HA II + D S+ L S G + +
Sbjct: 14 TAALISKNTYLDFFKRSTSISHLA---QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYY 70
Query: 226 ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML-SENMQPNEYTLTSVLSQCC 284
A F ++ +V + + + L +F + S +++PN T +S
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 285 EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNA 344
+ G +H G +S L + ++++ +Y K + +A+ +F M + + WN
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 345 MIAGHAKMMEQSRDNLYACWNGTEALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQ 403
MI+G+ K + +Y E++ +F L N S +LD T +L +
Sbjct: 191 MISGYRK------NEMYV-----ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 404 GEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
G QIH+ KTG S V T I++Y KC + S
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 177/357 (49%), Gaps = 17/357 (4%)
Query: 85 RSFSDTQIVHGHIMKTGNH--EDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTT 142
RS + +G ++K G+ +D + G++E +RR FD RN+ W T
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 143 LMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN-TLAIALNACTSLKSLKSGEQLHAYIIKY 201
++ YVQN + +F E + + S T +A +A ++L+ ++ G Q H ++ K
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 202 HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIF 261
+ + N+L +YS+CG + + F ++E++V+SW IS+ +G +GL +
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 262 VEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKR 321
EM + + + T+T++LS ++ E+G Q H+ + G + + + L+ +Y K
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKS 466
Query: 322 GCIGEAQILFKGMDDASL--VTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCS 379
G I +Q LF+G A TWN+MI+G+ + + L +F K+
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFL-----------VFRKMLEQ 515
Query: 380 GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
++ + T +S+L C ++ + G+Q+H +I+ +V V ++L++MY K ++
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAI 572
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 20/323 (6%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
+ LQQ R F HG + K +CG++ + F M
Sbjct: 328 VSALQQVELGRQF------HGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE 381
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
R+VV+W T++ +VQN + EM G T+ L+A ++L++ + G+Q
Sbjct: 382 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT 441
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR--IKEKNVISWTAAISSCGDSG 252
HA++I+ I F+ + + L +YSK G + + K F+ E++ +W + IS +G
Sbjct: 442 HAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNG 500
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
+K +F +ML +N++PN T+ S+L C +I ++LG Q+H + + N+ V +
Sbjct: 501 HTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS 560
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ +Y K G I A+ +F + + VT+ MI G+ + G A++L
Sbjct: 561 ALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQH-----------GMGERAISL 609
Query: 373 FSKLNCSGMKLDLFTFSSVLSVC 395
F + SG+K D TF +VLS C
Sbjct: 610 FLSMQESGIKPDAITFVAVLSAC 632
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 167/374 (44%), Gaps = 25/374 (6%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED----- 124
D+ Y L+ C + ++ + VH H+++ + C N D
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 125 -ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
R+ FD+M R+NVVAW TL+ YV+ R A F M+ PS + A +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 184 SLKSLKSGEQLHAYIIKYHIDF--DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+S+K + ++K ++ D V ++ S+Y++ G +E + + F E+N+ W
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 242 TAAISSCGDSGKAKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
I + + + +F+E + S+ + +E T S +Q +ELG Q H +
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
K E + + NSL+ +Y + G + ++ +F M + +V+WN MI+ +
Sbjct: 346 KNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQ--------- 396
Query: 361 YACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
NG E L L ++ G K+D T +++LS + G+Q HA I+ G
Sbjct: 397 ----NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF 452
Query: 419 DVIVGTSLINMYIK 432
+ + + LI+MY K
Sbjct: 453 EGM-NSYLIDMYSK 465
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
R+ W +++ GY QN + F VF +ML P+ T+A L AC+ + S+ G+QL
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H + I+ ++D + V +AL +YSK G +++A F + KE+N +++T I G G
Sbjct: 544 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMG 603
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
++ + +F+ M ++P+ T +VLS C ++ G ++
Sbjct: 604 ERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 148/328 (45%), Gaps = 22/328 (6%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN--TLAI 177
GN + AR+ FD +P+ V W T+++G++ N+ P A + M T + + + T +
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLY------SKCGRLEFALKAFK 231
L AC K+LK+G+ +H ++I+ + V N+L ++Y C + K F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
++ KNV++W IS +G+ + R F M+ ++P+ + +V + ++
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 292 GTQVHSMCTKLG--YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
+ + KLG Y +L V +S + +Y + G I ++ +F + ++ WN MI +
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 350 AKMMEQSRDNLYACWNGTEALNLF-SKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
+ D L E++ LF + + D T+ S + G Q H
Sbjct: 293 VQ-----NDCL------VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 409 AQTIKTGFLSDVIVGTSLINMYIKCASV 436
K +++ SL+ MY +C SV
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCGSV 369
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G ++ A F RN V +TT++LGY Q+ + A +F M +G P T
Sbjct: 568 KAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVA 627
Query: 178 ALNACTSLKSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
L+AC+ + G ++ + + Y+I + + + + GR+ A + K + E+
Sbjct: 628 VLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEE 687
Query: 237 NVIS--WTAAISSCGDSGK 253
I+ W + + SC G+
Sbjct: 688 GNIAELWGSLLGSCKLHGE 706
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 173/388 (44%), Gaps = 42/388 (10%)
Query: 54 GFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXX 113
G + L++ KEG +F L D + + + +H H++K G +
Sbjct: 118 GVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 114 XXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
CG M+ AR FD + +V +W ++ GY + + + + EM P+
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSV 237
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
TL + L+AC+ +K +++H Y+ + + + NAL + Y+ CG ++ A++ F+ +
Sbjct: 238 TLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Query: 234 KEKNVISWTAAISSCGDSGKAK-------------------------------KGLRIFV 262
K ++VISWT+ + + G K + L IF
Sbjct: 298 KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFR 357
Query: 263 EMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRG 322
EM S M P+E+T+ SVL+ C + LE+G + + K ++++ V N+L+ +Y K G
Sbjct: 358 EMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 323 CIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMK 382
C +AQ +F MD TW AM+ G A + G EA+ +F ++ ++
Sbjct: 418 CSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ-----------GQEAIKVFFQMQDMSIQ 466
Query: 383 LDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
D T+ VLS C Q + A+
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAK 494
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 25/338 (7%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G++ A + F +P +VV W ++ G+ + ++ ML G P +T L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 180 NACT-SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
N +L G++LH +++K+ + + V NAL +YS CG ++ A F R +++V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
SW IS + ++ + + VEM + P TL VLS C +++ +L +VH
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK------- 351
++ E +LR+ N+L+ Y G + A +F+ M +++W +++ G+ +
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 352 --MMEQ--SRDNL-----------YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
+Q RD + C+N E+L +F ++ +GM D FT SVL+ C
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFN--ESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 397 RMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ + GE I K +DV+VG +LI+MY KC
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 122/236 (51%), Gaps = 12/236 (5%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
GN++ AR FD MP R+ ++WT ++ GY++ + +F EM G P T+ L
Sbjct: 316 GNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVL 375
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
AC L SL+ GE + YI K I D VGNAL +Y KCG E A K F + +++
Sbjct: 376 TACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF 435
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
+WTA + ++G+ ++ +++F +M ++QP++ T VLS C ++ Q
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD---QARKFF 492
Query: 300 TKLGYESNLRVRNSLLY------LYLKRGCIGEA-QILFKGMDDASLVTWNAMIAG 348
K+ S+ R+ SL++ + + G + EA +IL K + + + W A++
Sbjct: 493 AKM--RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGA 546
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 146/277 (52%), Gaps = 12/277 (4%)
Query: 140 WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII 199
+ T++ GYV + A ++EM+ G+ P T L ACT LKS++ G+Q+H +
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 200 KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLR 259
K ++ D V N+L ++Y +CG +E + F++++ K SW++ +S+ G + L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 260 IFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLY 318
+F M SE N++ E + S L C L LG +H + E N+ V+ SL+ +Y
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 319 LKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNC 378
+K GC+ +A +F+ M+ + +T++AMI+G A E G AL +FSK+
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE-----------GESALRMFSKMIK 328
Query: 379 SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
G++ D + SVL+ C +G ++ A+ +K G
Sbjct: 329 EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 4/253 (1%)
Query: 55 FQEALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
F+EAL E + E D+ Y LL+ C +S + + +HG + K G D
Sbjct: 113 FEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNS 172
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYP 170
+CG ME + F+ + + +W++++ +F M T
Sbjct: 173 LINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKA 232
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
+ + AL AC + +L G +H ++++ + + V +L +Y KCG L+ AL F
Sbjct: 233 EESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIF 292
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
++++++N ++++A IS G+ + LR+F +M+ E ++P+ SVL+ C ++
Sbjct: 293 QKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVK 352
Query: 291 LGTQVHSMCTKLG 303
G +V + K G
Sbjct: 353 EGRRVFAEMLKEG 365
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 223 LEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQ 282
+ +A F+ I + + I + ++ L + EM+ +P+ +T +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 283 CCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTW 342
C ++ + G Q+H KLG E+++ V+NSL+ +Y + G + + +F+ ++ + +W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 343 NAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCS--GMKLDLFTFSSVLSVCGRMVA 400
++M++ A M W +E L LF + CS +K + S L C A
Sbjct: 202 SSMVSARAGM---------GMW--SECLLLFRGM-CSETNLKAEESGMVSALLACANTGA 249
Query: 401 FVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
G IH ++ ++IV TSL++MY+KC
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
A +F+G+DD +N MI G+ +M + EAL ++++ G + D F
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVM-----------SFEEALCFYNEMMQRGNEPDNF 133
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
T+ +L C R+ + +G+QIH Q K G +DV V SLINMY +C + +S
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSS 187
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 3/223 (1%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
+ E + + S + L C + + + +HG +++ + + KCG
Sbjct: 224 MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
++ A F M +RN + ++ ++ G + + A +F +M+ G P LN
Sbjct: 284 CLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLN 343
Query: 181 ACTSLKSLKSGEQLHAYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNV 238
AC+ +K G ++ A ++K ++ L L + G LE AL+ + I EKN
Sbjct: 344 ACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLTSVL 280
+ W +S C + G E+L + P +Y L S L
Sbjct: 404 VIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNL 446
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 178/393 (45%), Gaps = 19/393 (4%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIV-----HGHIMKTGNHEDXXXX 109
+ EAL L K + ++ + +L I +F + H +K G D
Sbjct: 26 YDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVS 85
Query: 110 XXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
K R+ FD M R+ V++ +++ Q+ A + EM G
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 170 PSMNTLAIALNACTSL-KSLKSGEQLHAYI-IKYHIDFDTSVGNALCSLYSKCGRLEFAL 227
P +A L CT + S K HA + + + + AL +Y K A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 228 KAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQ 287
F +++ KN +SWTA IS C + + G+ +F M EN++PN TL SVL C E+
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELN 265
Query: 288 F-LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMI 346
+ L ++H + G ++ R+ + + +Y + G + +++LF+ +V W++MI
Sbjct: 266 YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 347 AGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
+G+A+ + S E +NL +++ G++ + T +++S C
Sbjct: 326 SGYAETGDCS-----------EVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 407 IHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+H+Q +K GF+S +++G +LI+MY KC S+ A
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAA 407
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 12/290 (4%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
A FD M +N V+WT ++ G V N + +F M P+ TL L AC
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE 263
Query: 185 LKSLKS-GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
L S +++H + ++ D + A ++Y +CG + + F+ K ++V+ W++
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSS 323
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
IS ++G + + + +M E ++ N TL +++S C L + VHS K G
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCG 383
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ S++ + N+L+ +Y K G + A+ +F + + LV+W++MI + L+
Sbjct: 384 FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYG---------LHG- 433
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
+G+EAL +F + G ++D F ++LS C + + I Q K
Sbjct: 434 -HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK 482
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 10/260 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG + G H D +CGN+ +R F+ R+VV W++++ GY +
Sbjct: 274 IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD 333
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
++ ++M G + TL ++ACT+ L +H+ I+K +GNA
Sbjct: 334 CSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNA 393
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L +Y+KCG L A + F + EK+++SW++ I++ G G + L IF M+ + +
Sbjct: 394 LIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVD 453
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
+ ++LS C +E + + K Y + + + Y+ L +G F
Sbjct: 454 DMAFLAILSACNHAGLVEEAQTIFTQAGK--YHMPVTLEHYACYINL----LGR----FG 503
Query: 333 GMDDASLVTWNAMIAGHAKM 352
+DDA VT N + A++
Sbjct: 504 KIDDAFEVTINMPMKPSARI 523
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 20/369 (5%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D + +L+ C R+ D +H +K G D + + +AR F
Sbjct: 152 DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D MP R++ +W ++ GY Q+ K A + + + S T+ L+ACT
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV----TVVSLLSACTEAGDFN 264
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G +H+Y IK+ ++ + V N L LY++ GRL K F R+ +++ISW + I +
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG-YESNL 308
+ + + + +F EM +QP+ TL S+ S ++ + V + G + ++
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
+ N+++ +Y K G + A+ +F + + +++WN +I+G+A+ N +A +E
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ-------NGFA----SE 433
Query: 369 ALNLFSKLNCSG-MKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLI 427
A+ +++ + G + + T+ SVL C + A QG ++H + +K G DV V TSL
Sbjct: 434 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA 493
Query: 428 NMYIKCASV 436
+MY KC +
Sbjct: 494 DMYGKCGRL 502
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 151/320 (47%), Gaps = 22/320 (6%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDE-MLHTGSYPSMNTLAIA 178
GN+ AR FDH+ R+V AW ++ GY + F ML +G P T
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L AC +++ G ++H +K+ +D V +L LYS+ + A F + +++
Sbjct: 160 LKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDM 216
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP-NEYTLTSVLSQCCEIQFLELGTQVHS 297
SW A IS SG AK+ L LS ++ + T+ S+LS C E G +HS
Sbjct: 217 GSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
K G ES L V N L+ LY + G + + Q +F M L++WN++I + ++ EQ
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY-ELNEQP- 329
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG-F 416
A++LF ++ S ++ D T S+ S+ ++ + T++ G F
Sbjct: 330 ---------LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 417 LSDVIVGTSLINMYIKCASV 436
L D+ +G +++ MY K V
Sbjct: 381 LEDITIGNAVVVMYAKLGLV 400
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 161/343 (46%), Gaps = 16/343 (4%)
Query: 56 QEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXX 115
+EAL+L+ G +DS + LL C + F+ +H + +K G +
Sbjct: 233 KEALTLSN-GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 116 XXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
+ G + D ++ FD M R++++W +++ Y N +P A +F EM + P TL
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 176 AIALNACTSLKSLKSGEQLHAYIIK--YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
+ + L +++ + + ++ + ++ D ++GNA+ +Y+K G ++ A F +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELG 292
+VISW IS +G A + + ++ M E + N+ T SVL C + L G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM 352
++H K G ++ V SL +Y K G + +A LF + + V WN +IA H
Sbjct: 471 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530
Query: 353 MEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+G +A+ LF ++ G+K D TF ++LS C
Sbjct: 531 G-----------HGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 11/278 (3%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNH-EDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR 135
+L Q D R+ Q G ++ G ED K G ++ AR F+ +P
Sbjct: 357 ILSQLGDIRACRSVQ---GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS-MNTLAIALNACTSLKSLKSGEQL 194
+V++W T++ GY QN A +++ M G + T L AC+ +L+ G +L
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H ++K + D V +L +Y KCGRLE AL F +I N + W I+ G G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC-TKLGYESNLRVRNS 313
+K + +F EML E ++P+ T ++LS C ++ G M T G +L+
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 314 LLYLYLKRGCIGEAQILFKGMD---DASLVTWNAMIAG 348
++ +Y + G + A K M DAS+ W A+++
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASI--WGALLSA 629
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 124/250 (49%), Gaps = 22/250 (8%)
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
CT+L+S K LHA ++ + + L +LY G + A F I+ ++V +W
Sbjct: 64 CTNLQSAKC---LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAW 120
Query: 242 TAAISSCGDSGKAKKGLRIF-VEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
IS G +G + + +R F + MLS + P+ T SVL C + + G ++H +
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLAL 177
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
K G+ ++ V SL++LY + +G A+ILF M + +WNAMI+G+ +
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ--------- 228
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
N EAL L + L +D T S+LS C F +G IH+ +IK G S++
Sbjct: 229 --SGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 421 IVGTSLINMY 430
V LI++Y
Sbjct: 283 FVSNKLIDLY 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 4/223 (1%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
+ +EG + ++ +L C + +HG ++K G + D KCG
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
+EDA F +PR N V W TL+ + + + A +F EML G P T L+
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 181 ACTSLKSLKSGEQLHAYI-IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNV 238
AC+ + G+ + Y I + +Y + G+LE ALK K + + +
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
W A +S+C G G +I E L E ++P +LS
Sbjct: 621 SIWGALLSACRVHGNVDLG-KIASEHLFE-VEPEHVGYHVLLS 661
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 168/360 (46%), Gaps = 18/360 (5%)
Query: 80 QCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXX-XKCGNMEDARRAFDHMPRRNVV 138
Q I K TQI H ++ TGN + + G + AR+ FD +P+R V
Sbjct: 24 QSISKLKRHITQI-HAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVS 82
Query: 139 AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYI 198
+ ++++ Y + P ++D+M+ P +T + + AC S L+ GE +
Sbjct: 83 VYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKA 142
Query: 199 IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGL 258
+ + D V +++ +LY KCG+++ A F ++ +++VI WT ++ +GK+ K +
Sbjct: 143 VDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAV 202
Query: 259 RIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLY 318
+ EM +E + + +L ++ ++G VH + G N+ V SL+ +Y
Sbjct: 203 EFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMY 262
Query: 319 LKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKL 376
K G I A +F M + V+W ++I+G A+ NG +A ++
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ-------------NGLANKAFEAVVEM 309
Query: 377 NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
G + DL T VL C ++ + G +H +K L D + T+L++MY KC ++
Sbjct: 310 QSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL-DRVTATALMDMYSKCGAL 368
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 158/365 (43%), Gaps = 25/365 (6%)
Query: 50 SRYRGFQEALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDX 106
SR + E L L + E DSS + ++ C+ + V + G D
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 107 XXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHT 166
KCG M++A F M +R+V+ WTT++ G+ Q + A + EM +
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 167 GSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFA 226
G + L A L K G +H Y+ + + + V +L +Y+K G +E A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 227 LKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI 286
+ F R+ K +SW + IS +G A K VEM S QP+ TL VL C ++
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 287 QFLELGTQVHSMCTKLGYESNLRVR-NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAM 345
L+ G VH C L RV +L+ +Y K G + ++ +F+ + LV WN M
Sbjct: 332 GSLKTGRLVH--CYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTM 389
Query: 346 IAGHAKMMEQSRDNLYACW----NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAF 401
I+ C+ NG E ++LF K+ S ++ D TF+S+LS
Sbjct: 390 IS---------------CYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLV 434
Query: 402 VQGEQ 406
QG+
Sbjct: 435 EQGQH 439
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 134/284 (47%), Gaps = 9/284 (3%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQI---VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDAR 126
D + LLQ D DT++ VHG++ +TG + K G +E A
Sbjct: 216 DRVVMLGLLQASGD---LGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVAS 272
Query: 127 RAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLK 186
R F M + V+W +L+ G+ QN AF EM G P + TL L AC+ +
Sbjct: 273 RVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVG 332
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
SLK+G +H YI+K H+ D AL +YSKCG L + + F+ + K+++ W IS
Sbjct: 333 SLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMIS 391
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS-MCTKLGYE 305
G G ++ + +F++M N++P+ T S+LS +E G S M K +
Sbjct: 392 CYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQ 451
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+ + L+ L + G + EA + D +L W A+++G
Sbjct: 452 PSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 21/265 (7%)
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCS------LYSKCGRL---EFALKAFKRIKE 235
+K L+S +L +I + H F S GN L L + CGR+ +A K F + +
Sbjct: 20 IKFLQSISKLKRHITQIHA-FVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQ 78
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+ V + + I + LR++ +M++E +QP+ T T + C LE G V
Sbjct: 79 RGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAV 138
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
GY++++ V +S+L LY+K G + EA++LF M ++ W M+ G A Q
Sbjct: 139 WCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFA----Q 194
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
+ +L +A+ + ++ G D +L G + G +H +TG
Sbjct: 195 AGKSL-------KAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTG 247
Query: 416 FLSDVIVGTSLINMYIKCASVVCAS 440
+V+V TSL++MY K + AS
Sbjct: 248 LPMNVVVETSLVDMYAKVGFIEVAS 272
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 154/318 (48%), Gaps = 20/318 (6%)
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS 190
++ + +V +W +++ ++ A F M YP+ ++ A+ AC+SL + S
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
G+Q H + D V +AL +YS CG+LE A K F I ++N++SWT+ I
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 251 SGKAKKGLRIFVEML-SEN-----MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
+G A + +F ++L EN M + L SV+S C + L +HS K G+
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 305 ESNLRVRNSLLYLYLK--RGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
+ + V N+LL Y K G + A+ +F + D V++N++++ +A+
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ----------- 263
Query: 363 CWNGTEALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
EA +F +L + + T S+VL A G+ IH Q I+ G DVI
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 422 VGTSLINMYIKCASVVCA 439
VGTS+I+MY KC V A
Sbjct: 324 VGTSIIDMYCKCGRVETA 341
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 20/295 (6%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML------HTGSYPSM 172
CG +EDAR+ FD +P+RN+V+WT+++ GY N A +F ++L +
Sbjct: 124 CGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGR--LEFALKAF 230
L ++AC+ + + E +H+++IK D SVGN L Y+K G + A K F
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP-NEYTLTSVLSQCCEIQFL 289
+I +K+ +S+ + +S SG + + +F ++ + N TL++VL L
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
+G +H ++G E ++ V S++ +Y K G + A+ F M + ++ +W AMIAG+
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 350 AKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQG 404
++ AL LF + SG++ + TF SVL+ C V+G
Sbjct: 364 GMHGHAAK-----------ALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEG 407
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 7/286 (2%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGN--MEDAR 126
+DS + ++ C + T+ +H ++K G K G + AR
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVAR 240
Query: 127 RAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN--TLAIALNACTS 184
+ FD + ++ V++ ++M Y Q+ AF VF ++ + N TL+ L A +
Sbjct: 241 KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN-KVVTFNAITLSTVLLAVSH 299
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
+L+ G+ +H +I+ ++ D VG ++ +Y KCGR+E A KAF R+K KNV SWTA
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF-LELGTQVHSMCTKLG 303
I+ G G A K L +F M+ ++PN T SVL+ C +E ++M + G
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
E L ++ L + G + +A L + M + W++++A
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 158/348 (45%), Gaps = 43/348 (12%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L C D S + VHG +++ G D KC N+E AR+ FD M R+V
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSLKSGEQLHA 196
V+W +++ GY Q+ + ++ ML + P+ T+ AC L G ++H
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
+I+ HI D S+ NA+ Y+KCG L++A F + EK+ +++ A IS G K+
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 257 GLRIFVEMLSENM-------------------------------QPNEYTLTSVLSQCCE 285
+ +F EM S + +PN TL+S+L
Sbjct: 319 AMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTY 378
Query: 286 IQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAM 345
L+ G ++H+ + G ++N+ V S++ Y K G + AQ +F D SL+ W A+
Sbjct: 379 SSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAI 438
Query: 346 IAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
I +A D+ AC +LF ++ C G K D T ++VLS
Sbjct: 439 ITAYA----VHGDSDSAC-------SLFDQMQCLGTKPDDVTLTAVLS 475
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 30/345 (8%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS----MNTLAI--- 177
A FD + RN ++ L++ Y AF +F + + Y S ++++I
Sbjct: 76 ALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCV 135
Query: 178 --ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
AL+ C Q+H ++I+ D D VGN + + Y+KC +E A K F + E
Sbjct: 136 LKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSE 195
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
++V+SW + IS SG + +++ ML+ + +PN T+ SV C + L G +
Sbjct: 196 RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH----- 349
VH + + +L + N+++ Y K G + A+ LF M + VT+ A+I+G+
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGL 315
Query: 350 ----AKMMEQSRDNLYACWNG-----------TEALNLFSKLNCSGMKLDLFTFSSVLSV 394
+ + + WN E +N F ++ G + + T SS+L
Sbjct: 316 VKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPS 375
Query: 395 CGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
G++IHA I+ G +++ V TS+I+ Y K ++ A
Sbjct: 376 LTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGA 420
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 19/253 (7%)
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
QLHA I+ + I D + + L S Y++ R AL F I +N S+ A + +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 253 KAKKGLRIFVEML------SENMQPNEYTLTSVL---SQCCEIQFLELGTQVHSMCTKLG 303
+F+ + S+ +P+ +++ VL S C + L QVH + G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
++S++ V N ++ Y K I A+ +F M + +V+WN+MI+G+++ + C
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ-----SGSFEDC 217
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
+A+ L CS K + T SV CG+ + G ++H + I+ D+ +
Sbjct: 218 KKMYKAM-----LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 424 TSLINMYIKCASV 436
++I Y KC S+
Sbjct: 273 NAVIGFYAKCGSL 285
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G +++A F M + W ++ G +QN+ + + F EM+ GS P+ TL+ L
Sbjct: 314 GLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLL 373
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+ T +LK G+++HA+ I+ D + V ++ Y+K G L A + F K++++I
Sbjct: 374 PSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLI 433
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSM 298
+WTA I++ G + +F +M +P++ TLT+VLS ++ + SM
Sbjct: 434 AWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
TK E + ++ + + G + +A M D W A++ G
Sbjct: 494 LTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 7/193 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H ++ G + K G + A+R FD+ R+++AWT ++ Y +
Sbjct: 388 IHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGD 447
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACT-SLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
A +FD+M G+ P TL L+A S S + + + KY I+
Sbjct: 448 SDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYA 507
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVIS-WTAAI---SSCGDSGKAKKGLRIFVEMLSE 267
+ S+ S+ G+L A++ ++ + W A + S GD A+ EM E
Sbjct: 508 CMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPE 567
Query: 268 NMQPNEYTLTSVL 280
N YT+ + L
Sbjct: 568 N--TGNYTIMANL 578
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 153/322 (47%), Gaps = 15/322 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G M++A F MP+ NVV+W L+ G+V P+ A M G L
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPC 243
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK--- 234
L AC+ L G+QLH ++K ++ +AL +YS CG L +A F + K
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+V W + +S + + + L + +++ ++ + YTL+ L C L LG Q
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
VHS+ GYE + V + L+ L+ G I +A LF + + ++ ++ +I G K
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
S A LF +L G+ D F S++L VC + + G+QIH IK
Sbjct: 424 NSL-----------AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKK 472
Query: 415 GFLSDVIVGTSLINMYIKCASV 436
G+ S+ + T+L++MY+KC +
Sbjct: 473 GYESEPVTATALVDMYVKCGEI 494
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 170/394 (43%), Gaps = 47/394 (11%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ C ++F + + H++K G ++ + DA + FD M RN+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL-AIALNACTSLKSLKSGEQLHA 196
V WTT++ GY + +P A ++ ML + + + + L AC + ++ G ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRL-------------------------------EF 225
I K ++ D + N++ +Y K GRL +
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 226 ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCE 285
A+ F R+ + NV+SW IS D G + + L V M E + + + L L C
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 286 IQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF---KGMDDASLVTW 342
L +G Q+H K G ES+ ++L+ +Y G + A +F K ++S+ W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 343 NAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFV 402
N+M++G + +N A W L ++ S + D +T S L +C V
Sbjct: 311 NSMLSGFLI----NEENEAALW-------LLLQIYQSDLCFDSYTLSGALKICINYVNLR 359
Query: 403 QGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
G Q+H+ + +G+ D IVG+ L++++ ++
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILVDLHANVGNI 393
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 160/355 (45%), Gaps = 21/355 (5%)
Query: 47 LDPSRYRGFQEALSLAKEGTEEVDSSFYIPL-LQQCIDKRSFSDTQIVHGHIMKTGNHED 105
+D R + + + +EG V F +P L+ C + + +H ++K+G
Sbjct: 215 VDKGSPRALEFLVRMQREGL--VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESS 272
Query: 106 XXXXXXXXXXXXKCGNMEDARRAFDH---MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDE 162
CG++ A F +V W +++ G++ N + A + +
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQ 332
Query: 163 MLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGR 222
+ + TL+ AL C + +L+ G Q+H+ ++ + D VG+ L L++ G
Sbjct: 333 IYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGN 392
Query: 223 LEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQ 282
++ A K F R+ K++I+++ I C SG +F E++ + +++ ++++L
Sbjct: 393 IQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKV 452
Query: 283 CCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTW 342
C + L G Q+H +C K GYES +L+ +Y+K G I +LF GM + +V+W
Sbjct: 453 CSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSW 512
Query: 343 NAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+I G + NG EA F K+ G++ + TF +LS C
Sbjct: 513 TGIIVGFGQ-------------NGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 20/289 (6%)
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK 231
+ +A L C +++ K GE + A++IK I + + N + S+Y L A K F
Sbjct: 5 LKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFD 64
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEIQFLE 290
+ E+N+++WT +S GK K + ++ ML SE NE+ ++VL C + ++
Sbjct: 65 EMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ 124
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
LG V+ K ++ + NS++ +Y+K G + EA FK + S +WN +I+G+
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 351 K--MMEQSRDNLY-------ACWN----------GTEALNLFSKLNCSGMKLDLFTFSSV 391
K +M+++ + WN AL ++ G+ LD F
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCG 244
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
L C G+Q+H +K+G S ++LI+MY C S++ A+
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 1/258 (0%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ CI+ + VH ++ +G D GN++DA + F +P +++
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
+A++ L+ G V++ AF++F E++ G ++ L C+SL SL G+Q+H
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
IK + + AL +Y KCG ++ + F + E++V+SWT I G +G+ ++
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG-TQVHSMCTKLGYESNLRVRNSLLY 316
R F +M++ ++PN+ T +LS C LE + + +M ++ G E L ++
Sbjct: 529 FRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVD 588
Query: 317 LYLKRGCIGEAQILFKGM 334
L + G EA L M
Sbjct: 589 LLGQAGLFQEANELINKM 606
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 164/371 (44%), Gaps = 56/371 (15%)
Query: 82 IDKRSFSDTQIVHGHIMKTGNHE------------DXXXXXXXXXXXXKCGNMEDARRAF 129
I +R SD ++ K GN E D K ++E+AR+ F
Sbjct: 162 ISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYF 221
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D MP ++VV+W ++ GY QN + A +F++ML G P+ T I ++AC+
Sbjct: 222 DRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKC----------------------------- 220
L I + + + V AL +++KC
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGY 341
Query: 221 ---GRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTL 276
G + A + F + ++NV+SW + I+ +G+A + F +M+ + +P+E T+
Sbjct: 342 TRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTM 401
Query: 277 TSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD 336
SVLS C + LELG + K + N SL+++Y + G + EA+ +F M +
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE 461
Query: 337 ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
+V++N + A A +G E LNL SK+ G++ D T++SVL+ C
Sbjct: 462 RDVVSYNTLFTAFA-----------ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN 510
Query: 397 RMVAFVQGEQI 407
R +G++I
Sbjct: 511 RAGLLKEGQRI 521
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 167/377 (44%), Gaps = 62/377 (16%)
Query: 120 GNMEDARRAFDHMP--RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
G++ AR F+ P R+ V + ++ G+ N+ A ++F +M H G P T A
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 178 ALNACTSL-KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGR----LEFALKAFKR 232
L + K Q HA +K + TSV NAL S+YSKC L A K F
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 233 IKEKNVISWT--------------------------------AAISSCGDSGKAKKGLRI 260
I EK+ SWT A IS + G ++ L +
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 261 FVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLK 320
M+S ++ +E+T SV+ C L+LG QVH+ + + + NSL+ LY K
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYK 332
Query: 321 RGCIGEAQILFKGMDDASLVTWNAMIAGH--------AKMM--EQSRDNLYACWN----- 365
G EA+ +F+ M LV+WNA+++G+ AK++ E N+ + W
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS-WMIMISG 391
Query: 366 ------GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
G E L LFS + G + + FS + C + A+ G+Q HAQ +K GF S
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 420 VIVGTSLINMYIKCASV 436
+ G +LI MY KC V
Sbjct: 452 LSAGNALITMYAKCGVV 468
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 151/348 (43%), Gaps = 75/348 (21%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSR----------------------------- 152
+ AR+ FD + ++ +WTT+M GYV+N
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 153 ---PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
+ A + M+ +G T + AC + L+ G+Q+HAY+++ DF
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHF 322
Query: 210 GNALCSLYSKCGRLEFALKAF-------------------------------KRIKEKNV 238
N+L SLY KCG+ + A F K +KEKN+
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+SW IS ++G ++GL++F M E +P +Y + + C + G Q H+
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
K+G++S+L N+L+ +Y K G + EA+ +F+ M V+WNA+IA
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA---------- 492
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
L +G EA++++ ++ G++ D T +VL+ C QG +
Sbjct: 493 -LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 44/336 (13%)
Query: 53 RGF-QEALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGN---HED 105
RGF QEAL + + E+D Y +++ C + VH ++++ + H D
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 106 XXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH 165
KCG ++AR F+ MP +++V+W L+ GYV + A +F EM
Sbjct: 324 NSLVSLYY----KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 166 -------------------------------TGSYPSMNTLAIALNACTSLKSLKSGEQL 194
G P + A+ +C L + +G+Q
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
HA ++K D S GNAL ++Y+KCG +E A + F+ + + +SW A I++ G G
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESNLRVRNS 313
+ + ++ EML + ++P+ TL +VL+ C ++ G + SM T
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559
Query: 314 LLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
L+ L + G +A+ + + + + W A+++G
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
+ +EG E D +F ++ C ++ + Q H ++K G KCG
Sbjct: 408 MKREGFEPCDYAFS-GAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
+E+AR+ F MP + V+W L+ Q+ A V++EML G P TL L
Sbjct: 467 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 181 ACTSLKSLKSGEQ-LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
AC+ + G + + Y I L L + G+ A + + K
Sbjct: 527 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 240 S-WTAAISSCGDSGKAKKGL 258
W A +S C G + G+
Sbjct: 587 EIWEALLSGCRVHGNMELGI 606
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 34/200 (17%)
Query: 269 MQPNEYTLTSV-------LSQCCEIQF--LELGTQVHSMCTKLGYESNLRVRNSLLYLYL 319
MQPN + ++ L C ++ L+L VH G++ + N L+ +Y
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 320 KRGCIGEAQILFKGMDDASLVTWNAMIAGHAK---------MMEQS----RDN-LYACW- 364
K + A+ LF + + + M++G+ + E++ RD +Y
Sbjct: 61 KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI 120
Query: 365 -------NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE--QIHAQTIKTG 415
+G A+NLF K+ G K D FTF+SVL+ +VA + + Q HA +K+G
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSG 179
Query: 416 FLSDVIVGTSLINMYIKCAS 435
V +L+++Y KCAS
Sbjct: 180 AGYITSVSNALVSVYSKCAS 199
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 169/375 (45%), Gaps = 25/375 (6%)
Query: 31 KGQNISLQKSHKFNTHLDPSRYRG-FQEALSLAKEGTEEVDS--SFYIP-LLQQCIDKRS 86
+ ++ S +N L Y+ F E++SL + S +F P +L+ C
Sbjct: 9 RNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSL 68
Query: 87 FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN--VVAWTTLM 144
Q +H H+ K G + KCG + DAR+ F+ P+ + V + L+
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 145 LGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHID 204
GY NS+ A ++F M TG T+ + CT + L G LH +K +D
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 205 FDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM 264
+ +V N+ ++Y KCG +E + F + K +I+W A IS +G A L ++ +M
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 265 LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
S + P+ +TL SVLS C + ++G +V + G+ N+ V N+ + +Y + G +
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 325 GEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN----GTEALNLFSKLNCSG 380
+A+ +F M SLV+W AMI C+ G L LF + G
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMI---------------GCYGMHGMGEIGLMLFDDMIKRG 353
Query: 381 MKLDLFTFSSVLSVC 395
++ D F VLS C
Sbjct: 354 IRPDGAVFVMVLSAC 368
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 17/304 (5%)
Query: 140 WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII 199
W + S + ++ ML +GS P + L +C SL SG+QLH ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 200 KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS--WTAAISSCGDSGKAKKG 257
K + + V AL S+Y KCG + A K F+ + + +S + A IS + K
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYL 317
+F M + + T+ ++ C ++L LG +H C K G +S + V NS + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 318 YLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT--EALNLFSK 375
Y+K G + + LF M L+TWNA+I+G+++ NG + L L+ +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ-------------NGLAYDVLELYEQ 247
Query: 376 LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
+ SG+ D FT SVLS C + A G ++ GF+ +V V + I+MY +C +
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 436 VVCA 439
+ A
Sbjct: 308 LAKA 311
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 2/287 (0%)
Query: 63 KEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNM 122
KE VDS + L+ C + +HG +K G + KCG++
Sbjct: 148 KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSV 207
Query: 123 EDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNAC 182
E RR FD MP + ++ W ++ GY QN ++++M +G P TL L++C
Sbjct: 208 EAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSC 267
Query: 183 TSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
L + K G ++ + + V NA S+Y++CG L A F + K+++SWT
Sbjct: 268 AHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWT 327
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTK 301
A I G G + GL +F +M+ ++P+ VLS C + G ++ +M +
Sbjct: 328 AMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
E + L+ L + G + EA + M + W A++
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 11/276 (3%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G ++DA + F MP +NV++WTT++ G QN R A +F ML + +
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVI 232
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
AC + + G Q+H IIK ++ V +L + Y+ C R+ + K F + V
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA 292
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
WTA +S + K + L IF ML ++ PN+ T S L+ C + L+ G ++H +
Sbjct: 293 VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVA 352
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
KLG E++ V NSL+ +Y G + +A +F + S+V+WN++I G A + R
Sbjct: 353 VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCA---QHGR-- 407
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
G A +F ++ + D TF+ +LS C
Sbjct: 408 ------GKWAFVIFGQMIRLNKEPDEITFTGLLSAC 437
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 111/219 (50%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
++ C + +F VHG I+K G + C + D+R+ FD
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
V WT L+ GY N + + A +F ML P+ +T A LN+C++L +L G+++H
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
+K ++ D VGN+L +YS G + A+ F +I +K+++SW + I C G+ K
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
IF +M+ N +P+E T T +LS C FLE G ++
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL 449
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 151/314 (48%), Gaps = 21/314 (6%)
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
DA FD MP R+VV+W +++ G V+ A +FDEM S+ + +N C
Sbjct: 84 DALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSWTAMVNGC- 138
Query: 184 SLKSLKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
+SG+ A + Y + DT+ N++ Y + G+++ ALK FK++ KNVISWT
Sbjct: 139 ----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWT 194
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
I + ++ + L +F ML ++ T V++ C +G QVH + KL
Sbjct: 195 TMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
G+ V SL+ Y IG+++ +F + W A+++G++ +
Sbjct: 255 GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHE------ 308
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIV 422
+AL++FS + + + + TF+S L+ C + G+++H +K G +D V
Sbjct: 309 -----DALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 423 GTSLINMYIKCASV 436
G SL+ MY +V
Sbjct: 364 GNSLVVMYSDSGNV 377
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 217 YSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTL 276
Y++ RL AL F + ++V+SW + IS C + G +++F EM ++ +
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSW 131
Query: 277 TSVLSQCCEIQFLELGTQV-HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD 335
T++++ C ++ ++ + M K + NS+++ YL+ G + +A LFK M
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 336 DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
++++W MI G ++Q+ EAL+LF + +K F+ V++ C
Sbjct: 187 GKNVISWTTMICG----LDQNE-------RSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 396 GRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
AF G Q+H IK GFL + V SLI Y C +
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG +K G D GN+ DA F + ++++V+W ++++G Q+ R
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK--YHIDFDTSVG 210
K AF +F +M+ P T L+AC+ L+ G +L Y+ HID
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHY 467
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSCGDSGKAKKG 257
+ + +CG+L+ A + +R+ K N + W A +S+C +G
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRG 515
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 189/414 (45%), Gaps = 56/414 (13%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTG--NHEDXXXXXXXXXXXXK 118
+ K G + + ++ +L C+ FS +HG I+K+G N
Sbjct: 171 MRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDS 230
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN-TLAI 177
+ +D + FD +P+R+V +W T++ V+ + AF +F EM + + TL+
Sbjct: 231 GSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLST 290
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKC----------------- 220
L++CT L G +LH I+ + + SV NAL YSK
Sbjct: 291 LLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQD 350
Query: 221 --------------GRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
G ++ A++ F + EKN I++ A ++ +G K L++F +ML
Sbjct: 351 AVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQ 410
Query: 267 ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
++ +++LTS + C + ++ Q+H C K G N ++ +LL + + + +
Sbjct: 411 RGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMAD 470
Query: 327 AQILFK----GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCS- 379
A+ +F +D + T ++I G+A+ NG +A++LF + C
Sbjct: 471 AEEMFDQWPSNLDSSKATT--SIIGGYAR-------------NGLPDKAVSLFHRTLCEQ 515
Query: 380 GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
+ LD + + +L+VCG + G QIH +K G+ SD+ +G SLI+MY KC
Sbjct: 516 KLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKC 569
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 188/461 (40%), Gaps = 51/461 (11%)
Query: 18 QFKKYPPSSIPIDKGQNISLQKSHKFNTHLDPSRYRGFQEALSLA--------------- 62
F PPS P + + +S + + P R +LSL+
Sbjct: 11 NFPHIPPSIPPNHRPKLLS-----SLSLYRKPERLFALSASLSLSPATIHECSSSSSSSS 65
Query: 63 ----KEGTEEVDSSF--YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXX 116
KE TE+++S + LL+ T+ VH +K E
Sbjct: 66 SSFDKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKL-REEKTRLGNALISTY 124
Query: 117 XKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTL 175
K G +A F + VV++T L+ G+ + + A VF M G P+ T
Sbjct: 125 LKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTF 184
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSK--CGRLEFALKAFKRI 233
L AC + G Q+H I+K V N+L SLY K + LK F I
Sbjct: 185 VAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEI 244
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELG 292
+++V SW +SS GK+ K +F EM E + +TL+++LS C + L G
Sbjct: 245 PQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM 352
++H ++G L V N+L+ Y K + + + L++ M VT+ MI +
Sbjct: 305 RELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSF 364
Query: 353 -MEQSRDNLYA-----------------CWN--GTEALNLFSKLNCSGMKLDLFTFSSVL 392
M S ++A C N G +AL LF+ + G++L F+ +S +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
CG + EQIH IK G + + T+L++M +C
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRC 465
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 143/278 (51%), Gaps = 16/278 (5%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G ++ A F ++ +N + + LM G+ +N A +F +ML G + +L A+
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+AC + K EQ+H + IK+ F+ + AL + ++C R+ A + F + N+
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP-SNLD 483
Query: 240 SWTAAISSCGD---SGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQV 295
S A S G +G K + +F L E + +E +LT +L+ C + F E+G Q+
Sbjct: 484 SSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H K GY S++ + NSL+ +Y K +A +F M + +++WN++I+ + ++++
Sbjct: 544 HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY--ILQR 601
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
NG EAL L+S++N +K D+ T + V+S
Sbjct: 602 ---------NGDEALALWSRMNEKEIKPDIITLTLVIS 630
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Query: 90 TQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR--NVVAWTTLMLGY 147
++ +HG +K G + +C M DA FD P + A T+++ GY
Sbjct: 436 SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGY 495
Query: 148 VQNSRPKHAFHVFDEML-HTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFD 206
+N P A +F L + +L + L C +L + G Q+H Y +K D
Sbjct: 496 ARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 207 TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
S+GN+L S+Y+KC + A+K F ++E +VISW + IS + L ++ M
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 267 ENMQPNEYTLTSVLS 281
+ ++P+ TLT V+S
Sbjct: 616 KEIKPDIITLTLVIS 630
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
+E+ VH+ KL E R+ N+L+ YLK G EA ++F + ++V++ A+I+G
Sbjct: 96 VEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGM-KLDLFTFSSVLSVCGRMVAFVQGEQI 407
SR NL EAL +F ++ +G+ + + +TF ++L+ C R+ F G QI
Sbjct: 155 F------SRLNL-----EIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
Query: 408 HAQTIKTGFLSDVIVGTSLINMYIKCASVVC 438
H +K+GFL+ V V SL+++Y K + C
Sbjct: 204 HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC 234
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 187/407 (45%), Gaps = 80/407 (19%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
+ A+ L +G E+ D+S + LL+ + S + +HG++ K G +
Sbjct: 40 LRAAVELINDG-EKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMR 98
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
++EDA + FD MP +V++W +L+ GYVQ+ R + +F E+ + +P+ +
Sbjct: 99 FYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFS 158
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHID-FDTSVGNALCSLYSKCGRLEFALKAFKRI 233
AL AC L G +H+ ++K ++ + VGN L +Y KCG ++ A+ F+ +
Sbjct: 159 FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEM---------------------------LS 266
+EK+ +SW A ++SC +GK + GL F +M LS
Sbjct: 219 EEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLS 278
Query: 267 ENMQPNEYTLTSVLS------------------QCCEIQFLE-----------------L 291
+ PN + ++L+ ++F E
Sbjct: 279 DMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPW 338
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G+ +H+ KLG +S + V ++L+ +Y K G + A+++F M +L+ WN MI+G+A+
Sbjct: 339 GSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYAR 398
Query: 352 MMEQSRDNLYACWNG--TEALNLFSKLNCSG-MKLDLFTFSSVLSVC 395
NG EA+ LF++L +K D FTF ++L+VC
Sbjct: 399 -------------NGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
SW+ + + G LR VE++++ +P+ L +L ++ L Q+H
Sbjct: 23 SWSTIVPALARFGSIGV-LRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
TK G+ SN R+ NSL+ Y + +A +F M D +++WN++++G+ ++ R
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY---VQSGRFQ 138
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF-LS 418
E + LF +L+ S + + F+F++ L+ C R+ G IH++ +K G
Sbjct: 139 --------EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 419 DVIVGTSLINMYIKCA 434
+V+VG LI+MY KC
Sbjct: 191 NVVVGNCLIDMYGKCG 206
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 113/238 (47%), Gaps = 10/238 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G+ +A + MP N +W T++ GYV + + A F +M +G +L+I
Sbjct: 266 KSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSI 325
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L A +L + G +HA K +D V +AL +YSKCG L+ A F + KN
Sbjct: 326 VLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKN 385
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQC--CEIQFLELGTQ 294
+I W IS +G + + +++F ++ E ++P+ +T ++L+ C CE+ +
Sbjct: 386 LIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGY 445
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK----GMDDASLVTWNAMIAG 348
M + + ++ SL+ +RG + +A+ + + G D V W A++
Sbjct: 446 FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG---VAWRALLGA 500
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 12/328 (3%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
VDS + ++ C+ + ++HG MK G +D + G ME A++
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
FD +P RN V W LM GY++ S+ F +F M TG TL + AC ++ +
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAG 226
Query: 189 KSGEQLHAYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
K G+ +H I+ ID + ++ +Y KC L+ A K F+ ++NV+ WT IS
Sbjct: 227 KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISG 286
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
+A + +F +ML E++ PN+ TL ++L C + L G VH + G E +
Sbjct: 287 FAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMD 346
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
S + +Y + G I A+ +F M + ++++W++MI + L+
Sbjct: 347 AVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI------NGLF-----E 395
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVC 395
EAL+ F K+ + + TF S+LS C
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 151/304 (49%), Gaps = 7/304 (2%)
Query: 48 DPSRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHG-HIMKTGNHEDX 106
DP +R F L ++ +D+ I L++ C + + + VHG I ++ +
Sbjct: 191 DPEVFRLF----CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 107 XXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHT 166
KC +++AR+ F+ RNVV WTTL+ G+ + R AF +F +ML
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 167 GSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFA 226
P+ TLA L +C+SL SL+ G+ +H Y+I+ I+ D + +Y++CG ++ A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 227 LKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI 286
F + E+NVISW++ I++ G +G ++ L F +M S+N+ PN T S+LS C
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 287 QFLELG-TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVT-WNA 344
++ G Q SM G ++ L + G IGEA+ M + + W A
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486
Query: 345 MIAG 348
+++
Sbjct: 487 LLSA 490
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 165/358 (46%), Gaps = 18/358 (5%)
Query: 85 RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP--RRNVVAWTT 142
++ + TQ VH ++ G ++ + ++ A +F+ +P +RN +W T
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 143 LMLGYVQNSRPKHA--FHVFDEML-HTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII 199
++ GY ++ ++ +++ M H S N L A+ AC L L++G +H +
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFN-LVFAIKACVGLGLLENGILIHGLAM 136
Query: 200 KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLR 259
K +D D V +L +Y++ G +E A K F I +N + W + K + R
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 260 IFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY-ESNLRVRNSLLYLY 318
+F M + + TL ++ C + ++G VH + + + + + ++ S++ +Y
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
Query: 319 LKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNC 378
+K + A+ LF+ D ++V W +I+G AK C EA +LF ++
Sbjct: 257 VKCRLLDNARKLFETSVDRNVVMWTTLISGFAK-----------CERAVEAFDLFRQMLR 305
Query: 379 SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ + T +++L C + + G+ +H I+ G D + TS I+MY +C ++
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK--EK 236
L + K+L +Q+HA +I + + + +G++L + Y + RL+FA +F RI ++
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 237 NVISWTAAISSCGDSGKA--KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
N SW +S S L ++ M + + L + C + LE G
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
+H + K G + + V SL+ +Y + G + AQ +F + + V W ++ G+ K
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK--- 187
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
S+D E LF + +G+ LD T ++ CG + A G+ +H +I+
Sbjct: 188 YSKD--------PEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR 239
Query: 415 GFL--SDVIVGTSLINMYIKC 433
F+ SD + S+I+MY+KC
Sbjct: 240 SFIDQSDYL-QASIIDMYVKC 259
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L C S + VHG++++ G D +CGN++ AR FD MP RN
Sbjct: 318 ILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERN 377
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG-EQLH 195
V++W++++ + N + A F +M P+ T L+AC+ ++K G +Q
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFE 437
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS-WTAAISSCGDSGKA 254
+ Y + + + L + G + A + K + S W A +S+C +
Sbjct: 438 SMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEV 497
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQ 282
I ++LS M+P + ++ +LS
Sbjct: 498 DLAGEIAEKLLS--MEPEKSSVYVLLSN 523
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 16/321 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG++ R FD M R+ V+W ++ G + + F ++ G P+ +TL +
Sbjct: 73 KCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVL 132
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
++AC SL GE++H Y+I+ +SV N++ +Y+ L A K F + E++
Sbjct: 133 VIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERD 189
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
VISW+ I S S + GL++F EM+ E +P+ T+TSVL C ++ +++G VH
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 297 SMCTKLGYE-SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
+ G++ +++ V NSL+ +Y K + A +F ++V+WN+++AG Q
Sbjct: 250 GFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH--NQ 307
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
D EAL +F + +++D T S+L VC + + IH I+ G
Sbjct: 308 RYD---------EALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 416 FLSDVIVGTSLINMYIKCASV 436
+ S+ + +SLI+ Y C+ V
Sbjct: 359 YESNEVALSSLIDAYTSCSLV 379
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 175/375 (46%), Gaps = 26/375 (6%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
E ++S + ++ C + + D + +HG+++++G ++ AR+
Sbjct: 124 EPNTSTLVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARK 180
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACTSLK 186
FD M R+V++W+ ++ YVQ+ P +F EM+H + P T+ L ACT ++
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 187 SLKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
+ G +H + I+ D D V N+L +YSK ++ A + F +N++SW + +
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG---TQVHSMCTKL 302
+ + + + L +F M+ E ++ +E T+ S+L C +F E +H + +
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC---KFFEQPLPCKSIHGVIIRR 357
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
GYESN +SL+ Y + +A + M +V+ + MI+G A
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD------ 411
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF-LSDVI 421
EA+++F + + + T S+L+ C + H I+ ++D+
Sbjct: 412 -----EAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDIS 463
Query: 422 VGTSLINMYIKCASV 436
VGTS+++ Y KC ++
Sbjct: 464 VGTSIVDAYAKCGAI 478
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 7/302 (2%)
Query: 51 RYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
RY E L + EVD + LL+ C + +HG I++ G +
Sbjct: 308 RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALS 367
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
C ++DA D M ++VV+ +T++ G R A +F M T P
Sbjct: 368 SLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---P 424
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKA 229
+ T+ LNAC+ L++ + H I+ + D SVG ++ Y+KCG +E A +
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
F +I EKN+ISWT IS+ +G K L +F EM + PN T + LS C +
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLV 544
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD---ASLVTWNAMI 346
+ G + + ++ +L+ + ++ + + G I A L K + + A W A++
Sbjct: 545 KKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 604
Query: 347 AG 348
+G
Sbjct: 605 SG 606
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 139/339 (41%), Gaps = 20/339 (5%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXXXXXXXXKC 119
+ E E D +L+ C + VHG ++ G + D K
Sbjct: 216 MVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKG 275
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
+++ A R FD RN+V+W +++ G+V N R A +F M+ T+ L
Sbjct: 276 FDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLL 335
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
C + + +H II+ + + ++L Y+ C ++ A + K+V+
Sbjct: 336 RVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
S + IS +G++ + + IF M PN T+ S+L+ C L H +
Sbjct: 396 SCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 300 TKLGYESN-LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRD 358
+ N + V S++ Y K G I A+ F + + ++++W +I+ +A
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI------- 505
Query: 359 NLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
NG +AL LF ++ G + T+ + LS C
Sbjct: 506 ------NGLPDKALALFDEMKQKGYTPNAVTYLAALSAC 538
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 210 GNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
GN++ Y KCG L L+ F + ++ +SW + D G ++GL F ++
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
+PN TL V+ C + F G ++H + G+ V+NS+L +Y + A+
Sbjct: 124 EPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARK 180
Query: 330 LFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL-NCSGMKLDLFTF 388
LF M + +++W+ +I + QS++ + L LF ++ + + + D T
Sbjct: 181 LFDEMSERDVISWSVVIRSYV----QSKEPVV-------GLKLFKEMVHEAKTEPDCVTV 229
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGF-LSDVIVGTSLINMYIK 432
+SVL C M G +H +I+ GF L+DV V SLI+MY K
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK 274
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 15/323 (4%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
+ P+ + C + + +HG + K G ++D CG +A + F MP
Sbjct: 109 FPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP 168
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
R+VV+WT ++ G+ + K A F +M P++ T L + + L G+
Sbjct: 169 VRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKG 225
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H I+K GNAL +Y KC +L A++ F +++K+ +SW + IS +
Sbjct: 226 IHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER 285
Query: 254 AKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
+K+ + +F M S ++P+ + LTSVLS C + ++ G VH G + + +
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGT 345
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+++ +Y K G I A +F G+ ++ TWNA++ G L +G E+L
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGG-----------LAIHGHGLESLRY 394
Query: 373 FSKLNCSGMKLDLFTFSSVLSVC 395
F ++ G K +L TF + L+ C
Sbjct: 395 FEEMVKLGFKPNLVTFLAALNAC 417
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 15/302 (4%)
Query: 139 AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYI 198
++ TL+ Y +P+ + + G P M T AC ++ G+Q+H +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 199 IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGL 258
K D V N+L Y CG A K F + ++V+SWT I+ +G K+ L
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 259 RIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLY 318
F +M +++PN T VL + L LG +H + K +L N+L+ +Y
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 319 LKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNC 378
+K + +A +F ++ V+WN+MI+G L C EA++LFS +
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISG-----------LVHCERSKEAIDLFSLMQT 298
Query: 379 -SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVV 437
SG+K D +SVLS C + A G +H + G D +GT++++MY KC +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 438 CA 439
A
Sbjct: 359 TA 360
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 9/286 (3%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
++EAL + E + + Y+ +L S + +HG I+K +
Sbjct: 188 YKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM-LHTGSYPSMN 173
KC + DA R F + +++ V+W +++ G V R K A +F M +G P +
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
L L+AC SL ++ G +H YI+ I +DT +G A+ +Y+KCG +E AL+ F I
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT 293
+ KNV +W A + G + LR F EM+ +PN T + L+ CC ++ G
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Query: 294 Q-VHSMCTKLGYESNLRVR----NSLLYLYLKRGCIGEAQILFKGM 334
+ H M ++ E NL + ++ L + G + EA L K M
Sbjct: 428 RYFHKMKSR---EYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 19/366 (5%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNH---EDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
LL+ C + + +H H++ T ED KC AR+ FD MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACTSLKSLKSGE 192
RNVV+W +M GY + +F M +G S P+ + +C++ ++ G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
Q H +KY + V N L +YS C A++ + ++ +++A+S + G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
K+GL + + +E+ N T S L ++ L L QVHS + G+ + +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 313 SLLYLYLKRGCIGEAQILFKGMDD--ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
+L+ +Y K G + AQ +F DD A + N I A ++S + EAL
Sbjct: 277 ALINMYGKCGKVLYAQRVF---DDTHAQNIFLNTTIMD-AYFQDKSFE---------EAL 323
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
NLFSK++ + + +TF+ +L+ + QG+ +H +K+G+ + V+VG +L+NMY
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 431 IKCASV 436
K S+
Sbjct: 384 AKSGSI 389
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 151/339 (44%), Gaps = 15/339 (4%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+ + C + + + HG +K G C +A R D +P +
Sbjct: 142 VFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCD 201
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
+ +++ + GY++ K V + + + T +L ++L+ L Q+H+
Sbjct: 202 LSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHS 261
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
++++ + + AL ++Y KCG++ +A + F +N+ T + + ++
Sbjct: 262 RMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEE 321
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
L +F +M ++ + PNEYT +L+ E+ L+ G +H + K GY +++ V N+L+
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVN 381
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAG--HAKMMEQSRDNLYACWNGTEALNLFS 374
+Y K G I +A+ F GM +VTWN MI+G H + G EAL F
Sbjct: 382 MYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGL-------------GREALEAFD 428
Query: 375 KLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
++ +G + TF VL C + QG Q +K
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMK 467
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 5/298 (1%)
Query: 54 GFQEALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
F+E L + ++ E ++ Y+ L+ + R + VH +++ G + +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
KCG + A+R FD +N+ TT+M Y Q+ + A ++F +M P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
+ T AI LN+ L LK G+ LH ++K VGNAL ++Y+K G +E A KAF
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
+ +++++W IS C G ++ L F M+ PN T VL C I F+E
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 291 LGTQ-VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMI 346
G + + K + +++ ++ L K G +A+ + + +V W ++
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 15/265 (5%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDF---DTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
L C + L+ GE +HA++I + D N+L +LY KC A K F + E
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+NV+SW A + +SG + L++F M S +PNE+ T V C +E G Q
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
H K G S+ VRN+L+Y+Y GEA + + L +++ ++G+ +
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE--- 214
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
C E L++ K + T+ S L + + Q+H++ ++
Sbjct: 215 --------CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266
Query: 415 GFLSDVIVGTSLINMYIKCASVVCA 439
GF ++V +LINMY KC V+ A
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYA 291
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 19/289 (6%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQN-SRPKHAFHVFDEMLHTG-SYPSMNTLAIALNAC 182
A R FD + + W TL+ + SR + AF ++ +ML G S P +T L AC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 183 TSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
+ G+Q+H I+K+ D V N L LY CG L+ A K F + E++++SW
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 221
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK- 301
+ I + G+ L++F EM + +P+ YT+ SVLS C + L LGT H+ +
Sbjct: 222 SMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 302 --LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+ ++ V+NSL+ +Y K G + A+ +F+GM L +WNAMI G A
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATH------- 333
Query: 360 LYACWNGTEALNLFSKL--NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
EA+N F ++ ++ + TF +L C +G Q
Sbjct: 334 ----GRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 18/333 (5%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
+ + G D + +L+ C FS+ + VH I+K G D CG
Sbjct: 141 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
++ AR+ FD MP R++V+W +++ V+ A +F EM + P T+ L+
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLS 259
Query: 181 ACTSLKSLKSGEQLHAYIIK---YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
AC L SL G HA++++ + D V N+L +Y KCG L A + F+ +++++
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLS--ENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+ SW A I G+A++ + F M+ EN++PN T +L C F+ G Q
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 296 HSMCTK-LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMI------A 347
M + E L ++ L + G I EA + M V W +++
Sbjct: 380 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Query: 348 GHAKMMEQSRDNLYACWNGTEALNLFSKLNCSG 380
++ E+ N+ GT+ N S NCSG
Sbjct: 440 ASVELSEEIARNII----GTKEDNESSNGNCSG 468
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTS---VGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
C+ + LK QLHA+ ++ + + + + L S + +A + F I+ +
Sbjct: 58 CSDMSQLK---QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSS 114
Query: 239 ISWTAAISSCG-DSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
W I +C D + ++ ++ +ML P+++T VL C I G QVH
Sbjct: 115 FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVH 174
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
K G+ ++ V N L++LY GC+ A+ +F M + SLV+WN+MI + E
Sbjct: 175 CQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYD 234
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK--- 413
AL LF ++ S + D +T SVLS C + + G HA ++
Sbjct: 235 -----------SALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD 282
Query: 414 TGFLSDVIVGTSLINMYIKCASV 436
DV+V SLI MY KC S+
Sbjct: 283 VDVAMDVLVKNSLIEMYCKCGSL 305
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 160/373 (42%), Gaps = 54/373 (14%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G + AR+ FD MP + VAW T++ Y + + A +F ++ + + P +
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG---------------- 221
L+ C SL ++K G ++ + +I+ V N+L +Y KC
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 222 -----------------RLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM 264
+ E AL F + ++ +W IS GK + L +F EM
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 265 LSENMQPNEYTLTSVLSQC-CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
L +P+ YT +S+++ C + + G VH++ K G+ S + +NS+L Y K G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR---------DNLYACW---------- 364
+A + ++ + V+WN++I K+ E + + W
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 365 -NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
+G +AL F ++ SG+ D F + +VL C + G+ IH I GF VG
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 424 TSLINMYIKCASV 436
+L+N+Y KC +
Sbjct: 376 NALVNLYAKCGDI 388
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 136/325 (41%), Gaps = 47/325 (14%)
Query: 123 EDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNAC 182
E A F MP+R AW ++ G+ + + +F EML + P T + +NAC
Sbjct: 155 EAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Query: 183 TSLKS-LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSK---------------------- 219
++ S + G +HA ++K N++ S Y+K
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 220 ---------CGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
G E AL+ F EKN+++WT I+ G +G ++ LR FVEM+ +
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
+ + +VL C + L G +H G++ V N+L+ LY K G I EA
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 331 FKGMDDASLVTWNAMI--AGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
F + + LV+WN M+ G + +Q AL L+ + SG+K D TF
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQ-------------ALKLYDNMIASGIKPDNVTF 441
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIK 413
+L+ C +G I +K
Sbjct: 442 IGLLTTCSHSGLVEEGCMIFESMVK 466
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 3/215 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G E A F P +N+V WTT++ GY +N + A F EM+ +G
Sbjct: 283 KIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGA 342
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC+ L L G+ +H +I VGNAL +LY+KCG ++ A +AF I K+
Sbjct: 343 VLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
++SW + + G G A + L+++ M++ ++P+ T +L+ C +E G +
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 298 MCTKLGYESNLRVRN--SLLYLYLKRGCIGEAQIL 330
K Y L V + ++ ++ + G + EA+ L
Sbjct: 463 SMVK-DYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 23/241 (9%)
Query: 218 SKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLT 277
+K GR+ A + F + E + ++W ++S G ++ + +F ++ + +P++Y+ T
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 278 SVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM--D 335
++LS C + ++ G ++ S+ + G+ ++L V NSL+ +Y K A +F+ M D
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 336 DASLVTWNAMIAGH--AKMMEQSRD-------NLYACWNG-----------TEALNLFSK 375
+ VTW +++ + A+ E + D + WN L+LF +
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 376 LNCSGMKLDLFTFSSVLSVCGRMVA-FVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ S K D +TFSS+++ C + V G +HA +K G+ S V S+++ Y K
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 435 S 435
S
Sbjct: 255 S 255
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 320 KRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCS 379
K G I A+ +F GM + V WN M+ + SR L+ EA+ LF++L S
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSY------SRLGLH-----QEAIALFTQLRFS 64
Query: 380 GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
K D ++F+++LS C + G +I + I++GF + + V SLI+MY KC+ + A
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 440 S 440
+
Sbjct: 125 N 125
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 141/303 (46%), Gaps = 33/303 (10%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR-- 134
LL+ C + +F +T +H I K G D GN + A FD +P
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180
Query: 135 -----------------------------RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH 165
+N ++WTT++ GYVQ K A +F EM +
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 166 TGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEF 225
+ P +LA AL+AC L +L+ G+ +H+Y+ K I D+ +G L +Y+KCG +E
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 226 ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCE 285
AL+ FK IK+K+V +WTA IS G ++ + F+EM ++PN T T+VL+ C
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360
Query: 286 IQFLELGTQV-HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWN 343
+E G + +SM + + ++ L + G + EA+ + M + V W
Sbjct: 361 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 420
Query: 344 AMI 346
A++
Sbjct: 421 ALL 423
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 161/364 (44%), Gaps = 48/364 (13%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX---XXXKCGNMEDARRAFDHMPR 134
LQ+C + +H ++KTG +D + A+ FD R
Sbjct: 21 LQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
+ W ++ G+ + P+ + ++ ML + + + T L AC++L + + Q+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 195 HAYIIKYHIDFDTSVGNALCSLYS-------------------------------KCGRL 223
HA I K + D N+L + Y+ K G++
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 224 EFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
+ AL F+++ EKN ISWT IS + K+ L++F EM + +++P+ +L + LS C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 284 CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWN 343
++ LE G +HS K + + L+ +Y K G + EA +FK + S+ W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 344 AMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ 403
A+I+G+A +G EA++ F ++ G+K ++ TF++VL+ C +
Sbjct: 318 ALISGYAYHG-----------HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 404 GEQI 407
G+ I
Sbjct: 367 GKLI 370
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 26/281 (9%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN---ALCSLYSKCGRLEFALKAFKRIKE 235
L C+ + LK Q+HA ++K + D+ + C + L +A F
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+ W I S + ++ L ++ ML + N YT S+L C + E TQ+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA----- 350
H+ TKLGYE+++ NSL+ Y G A +LF + + V+WN++I G+
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 351 --------KMMEQSRDNLYACWNG-------TEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
KM E++ + +G EAL LF ++ S ++ D + ++ LS C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 396 GRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
++ A QG+ IH+ KT D ++G LI+MY KC +
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEM 298
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 7/199 (3%)
Query: 56 QEALSLAKE---GTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXX 112
+EAL L E E D+ L C + + +H ++ KT D
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 113 XXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSM 172
KCG ME+A F ++ +++V AWT L+ GY + + A F EM G P++
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC--SLYSKCGRLEFALKAF 230
T L AC+ ++ G +L Y ++ + ++ + C L + G L+ A +
Sbjct: 349 ITFTAVLTACSYTGLVEEG-KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFI 407
Query: 231 KRIKEK-NVISWTAAISSC 248
+ + K N + W A + +C
Sbjct: 408 QEMPLKPNAVIWGALLKAC 426
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 130/272 (47%), Gaps = 14/272 (5%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
AR H W L GY + P + V+ EM G P+ T L AC S
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
L +G Q+ ++K+ DFD VGN L LY C + A K F + E+NV+SW +
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
+++ ++GK F EM+ + P+E T+ +LS C L LG VHS
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVREL 243
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
E N R+ +L+ +Y K G + A+++F+ M D ++ TW+AMI G A+ Y
Sbjct: 244 ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQ---------YGF- 293
Query: 365 NGTEALNLFSK-LNCSGMKLDLFTFSSVLSVC 395
EAL LFSK + S ++ + TF VL C
Sbjct: 294 -AEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 5/275 (1%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL+ C + + + ++K G D C DAR+ FD M RN
Sbjct: 119 LLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERN 178
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
VV+W ++M V+N + F F EM+ P T+ + L+AC +L G+ +H+
Sbjct: 179 VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHS 236
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
++ ++ + +G AL +Y+K G LE+A F+R+ +KNV +W+A I G A++
Sbjct: 237 QVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEE 296
Query: 257 GLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
L++F +M+ E +++PN T VL C ++ G + K+ + + +
Sbjct: 297 ALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAM 356
Query: 316 YLYLKR-GCIGEAQILFKGMD-DASLVTWNAMIAG 348
L R G + EA K M + V W +++
Sbjct: 357 VDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC--SLYSKCGRLEFALKAFKRIK 234
I L C+S+K L Q+H I + D+ + + L S S L FA
Sbjct: 18 IFLKLCSSIKHLL---QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSS 74
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+ +W S + + ++ EM ++PN+ T +L C L G Q
Sbjct: 75 DSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
+ K G++ ++ V N+L++LY +A+ +F M + ++V+WN+++ ++E
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTA---LVE 191
Query: 355 QSRDNL-YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
+ NL + C+ + K C D T +LS CG ++ G+ +H+Q +
Sbjct: 192 NGKLNLVFECF-----CEMIGKRFCP----DETTMVVLLSACGGNLSL--GKLVHSQVMV 240
Query: 414 TGFLSDVIVGTSLINMYIK 432
+ +GT+L++MY K
Sbjct: 241 RELELNCRLGTALVDMYAK 259
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
A+ L D++ TWN + G++ S D+ E++ ++S++ G+K +
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYS-----SSDS------PVESIWVYSEMKRRGIKPNKL 114
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
TF +L C + G QI + +K GF DV VG +LI++Y C
Sbjct: 115 TFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTC 161
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 166/372 (44%), Gaps = 42/372 (11%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
+D ++P+L+ + + +HG K D CG + AR
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
FD M R+VV W T++ Y + AF +F+EM + P L ++AC ++
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 189 KSGEQLHAYIIKYHIDFDTS-------------------------------VGNALCSLY 217
+ ++ ++I+ + DT V A+ S Y
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 218 SKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLT 277
SKCGRL+ A F + ++K+++ WT IS+ +S ++ LR+F EM ++P+ ++
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 278 SVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA 337
SV+S C + L+ VHS G ES L + N+L+ +Y K G + + +F+ M
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 338 SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
++V+W++MI + E S +AL+LF+++ ++ + TF VL C
Sbjct: 409 NVVSWSSMINALSMHGEAS-----------DALSLFARMKQENVEPNEVTFVGVLYGCSH 457
Query: 398 MVAFVQGEQIHA 409
+G++I A
Sbjct: 458 SGLVEEGKKIFA 469
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 129/233 (55%), Gaps = 2/233 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG ++DA+ FD ++++V WTT++ YV++ P+ A VF+EM +G P + ++
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
++AC +L L + +H+ I ++ + S+ NAL ++Y+KCG L+ F+++ +N
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH- 296
V+SW++ I++ G+A L +F M EN++PNE T VL C +E G ++
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDAS-LVTWNAMIAG 348
SM + L ++ L+ + + EA + + M AS +V W ++++
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 155/373 (41%), Gaps = 21/373 (5%)
Query: 85 RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR-NVVAWTTL 143
+S + + +H HI++T + N+ A F +P + +
Sbjct: 23 KSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPF 82
Query: 144 MLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHI 203
+ ++S P+ + + H G + L A + + +L G +LH K
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 204 DFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVE 263
D V +Y+ CGR+ +A F + ++V++W I G + ++F E
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
M N+ P+E L +++S C + ++ + + + +L+ +Y GC
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHAK---------MMEQSRDNLYACWNGT------- 367
+ A+ F+ M +L AM++G++K + +Q+ CW
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 368 ----EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
EAL +F ++ CSG+K D+ + SV+S C + + + +H+ G S++ +
Sbjct: 323 DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSIN 382
Query: 424 TSLINMYIKCASV 436
+LINMY KC +
Sbjct: 383 NALINMYAKCGGL 395
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 31/338 (9%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G++ +AR+ FD MP R + W ++ G +Q + +F EM G P TL
Sbjct: 37 RAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS 96
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+ L+S+ G+Q+H Y IKY ++ D V ++L +Y + G+L+ + + +N
Sbjct: 97 VFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN 156
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+++W I +G + L ++ M +PN+ T +VLS C ++ G Q+H+
Sbjct: 157 LVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA 216
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA------- 350
K+G S + V +SL+ +Y K GC+G+A F +D V W++MI+ +
Sbjct: 217 EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDE 276
Query: 351 ------KMMEQSR---------DNLYACWNG---TEALNLFSKL-NCSGMKLDLFTFSSV 391
M EQ+ + LYAC + + L LF + G K L ++ V
Sbjct: 277 AIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 336
Query: 392 LSVCGRMVAFVQGEQ-IHAQTIKTGFLSDVIVGTSLIN 428
+ + GR Q E I + IKT D+++ +L++
Sbjct: 337 VDLLGRAGCLDQAEAIIRSMPIKT----DIVIWKTLLS 370
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 85 RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLM 144
RS S Q +HG+ +K G D + G ++D MP RN+VAW TL+
Sbjct: 105 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164
Query: 145 LGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHID 204
+G QN P+ +++ M +G P+ T L++C+ L G+Q+HA IK
Sbjct: 165 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224
Query: 205 FDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM 264
+V ++L S+YSKCG L A KAF ++++ + W++ IS+ G G+ + + +F M
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 265 LSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHS-MCTKLGYESNLRVRNSLLYLYLKRG 322
+ NM+ NE ++L C + G ++ M K G++ L+ ++ L + G
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAG 344
Query: 323 CIGEAQILFKGMD-DASLVTWNAMIA 347
C+ +A+ + + M +V W +++
Sbjct: 345 CLDQAEAIIRSMPIKTDIVIWKTLLS 370
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 118/226 (52%), Gaps = 15/226 (6%)
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
N L + Y + G L A K F + ++ + +W A I+ ++GL +F EM
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P+EYTL SV S ++ + +G Q+H K G E +L V +SL ++Y++ G + + +I+
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTF 388
+ M +LV WN +I G+A+ NG L L+ + SG + + TF
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQ-------------NGCPETVLYLYKMMKISGCRPNKITF 195
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+VLS C + QG+QIHA+ IK G S V V +SLI+MY KC
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
+ N N L+ Y++ G + A+ +F M D L TWNAMIAG L
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG-----------LIQFE 70
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
E L+LF +++ G D +T SV S + + G+QIH TIK G D++V +
Sbjct: 71 FNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNS 130
Query: 425 SLINMYIK 432
SL +MY++
Sbjct: 131 SLAHMYMR 138
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 150/340 (44%), Gaps = 17/340 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
V H+ K+G K G + A+ FD MP R+ V W L+ GY +N
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A+ +F ML G PS TL L C + G +H K ++ D+ V NA
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNA 191
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L S YSKC L A F+ +K+K+ +SW I + SG ++ + +F M +N++ +
Sbjct: 192 LISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEIS 251
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
T+ ++LS + L H + K G +++ V SL+ Y + GC+ A+ L+
Sbjct: 252 PVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
S+V ++++ +A+ + +Y FSK MK+D +L
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVY-----------FSKTRQLCMKIDAVALVGIL 354
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
C + G +H IK+G + +V LI MY K
Sbjct: 355 HGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSK 394
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 21/366 (5%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
+P QC S + VHG K+G D KC + A F M
Sbjct: 158 LPFCGQC---GFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD 214
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
++ V+W T++ Y Q+ + A VF M S T+ L+A S E L
Sbjct: 215 KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPL 268
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H ++K + D SV +L YS+CG L A + + K+ +++ T+ +S + G
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSL 314
+ F + M+ + L +L C + +++G +H K G + V N L
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 315 LYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFS 374
+ +Y K + LF+ + + L++WN++I+G ++ R + A +F
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISG---CVQSGR--------ASTAFEVFH 437
Query: 375 KLNCSGMKL-DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
++ +G L D T +S+L+ C ++ G+++H T++ F ++ V T+LI+MY KC
Sbjct: 438 QMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKC 497
Query: 434 ASVVCA 439
+ V A
Sbjct: 498 GNEVQA 503
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 148/307 (48%), Gaps = 19/307 (6%)
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT-SLKSLK-SGE 192
R++ + +L+ + +F ++L + P+ T++I L A T S S K E
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
Q+ ++ K +D V +L +LY K G + A F + E++ + W A I +G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
++F+ ML + P+ TL ++L C + F+ G VH + K G E + +V+N
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ Y K +G A++LF+ M D S V+WN MI +++ Q EA+ +
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQE-----------EAITV 239
Query: 373 FSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
F + +++ T ++LS A V E +H +K G ++D+ V TSL+ Y +
Sbjct: 240 FKNMFEKNVEISPVTIINLLS------AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSR 293
Query: 433 CASVVCA 439
C +V A
Sbjct: 294 CGCLVSA 300
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 159/358 (44%), Gaps = 22/358 (6%)
Query: 43 FNTHLDPSRYRGFQE-ALSLAK---EGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIM 98
+NT + G QE A+++ K E E+ I LL + +H ++
Sbjct: 220 WNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP------LHCLVV 273
Query: 99 KTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFH 158
K G D +CG + A R + + ++V T+++ Y + A
Sbjct: 274 KCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVV 333
Query: 159 VFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYS 218
F + L L+ C + G LH Y IK + T V N L ++YS
Sbjct: 334 YFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYS 393
Query: 219 KCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLT 277
K +E L F++++E +ISW + IS C SG+A +F +M L+ + P+ T+
Sbjct: 394 KFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIA 453
Query: 278 SVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA 337
S+L+ C ++ L LG ++H + +E+ V +L+ +Y K G +A+ +FK +
Sbjct: 454 SLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513
Query: 338 SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
TWN+MI+G++ Q R AL+ + ++ G+K D TF VLS C
Sbjct: 514 CTATWNSMISGYSLSGLQHR-----------ALSCYLEMREKGLKPDEITFLGVLSAC 560
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 5/285 (1%)
Query: 68 EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
++D+ + +L C +HG+ +K+G K ++E
Sbjct: 344 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF 403
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLK 186
F+ + +++W +++ G VQ+ R AF VF +M+ TG P T+A L C+ L
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
L G++LH Y ++ + + + V AL +Y+KCG A FK IK +W + IS
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYE 305
SG + L ++EM + ++P+E T VLS C F++ G +M + G
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Query: 306 SNLRVRNSLLYLYLKRGCI-GEAQILFKGMD-DASLVTWNAMIAG 348
L+ +L+ L R C+ EA L MD W A+++
Sbjct: 584 PTLQ-HYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 160/334 (47%), Gaps = 20/334 (5%)
Query: 71 SSFYIP---------LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGN 121
S+F++P LL RS +HG+++K+G K
Sbjct: 6 SAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQL 65
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
D+RRAF+ P+++ W++++ + QN P + +M+ P + L A +
Sbjct: 66 PFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKS 125
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
C L G +H +K D D VG++L +Y+KCG + +A K F + ++NV++W
Sbjct: 126 CAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTW 185
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ + G+ ++ L +F E L EN+ N+Y+ +SV+S C LELG Q+H + K
Sbjct: 186 SGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIK 245
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
++S+ V +SL+ LY K G A +F + +L WNAM+ +A+ +
Sbjct: 246 SSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQK---- 301
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+ LF ++ SGMK + TF +VL+ C
Sbjct: 302 -------VIELFKRMKLSGMKPNFITFLNVLNAC 328
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 7/271 (2%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L +C RS VH MKTG D KCG + AR+ FD MP+RN
Sbjct: 128 ILSRCDIGRS------VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRN 181
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
VV W+ +M GY Q + A +F E L + + + ++ C + L+ G Q+H
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG 241
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
IK D + VG++L SLYSKCG E A + F + KN+ W A + + +K
Sbjct: 242 LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQK 301
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
+ +F M M+PN T +VL+ C ++ G + E + SL+
Sbjct: 302 VIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVD 361
Query: 317 LYLKRGCIGEAQILFKGMD-DASLVTWNAMI 346
+ + G + EA + M D + W A++
Sbjct: 362 MLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 134/250 (53%), Gaps = 13/250 (5%)
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEF-ALKAFKRIKEKNVISWTAA 244
+S G QLH Y++K + V N L + YSK +L F + +AF+ +K+ +W++
Sbjct: 29 RSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK-SQLPFDSRRAFEDSPQKSSTTWSSI 87
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
IS + L +M++ N++P+++ L S C + ++G VH + K GY
Sbjct: 88 ISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY 147
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
++++ V +SL+ +Y K G I A+ +F M ++VTW+ M+ G+A+M E
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE-------- 199
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
EAL LF + + ++ ++FSSV+SVC G QIH +IK+ F S VG+
Sbjct: 200 ---EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGS 256
Query: 425 SLINMYIKCA 434
SL+++Y KC
Sbjct: 257 SLVSLYSKCG 266
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 17/340 (5%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y L+ C + S SD VH HI+ G+ +D G+++ AR+ FD
Sbjct: 80 YELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR 139
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT----SLKSLK 189
+R + W L + ++ +M G T L AC ++ L
Sbjct: 140 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLM 199
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G+++HA++ + + L +Y++ G +++A F + +NV+SW+A I+
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 250 DSGKAKKGLRIFVEMLSE--NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
+GKA + LR F EM+ E + PN T+ SVL C + LE G +H + G +S
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
L V ++L+ +Y + G + Q +F M D +V+WN++I+ + G
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG-----------VHGYGK 368
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+A+ +F ++ +G TF SVL C +G+++
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 152/331 (45%), Gaps = 26/331 (7%)
Query: 58 ALSLAKEGTE-------------EVDSSFYIPLLQQCIDKR----SFSDTQIVHGHIMKT 100
AL+LA G E E D Y +L+ C+ + +H H+ +
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211
Query: 101 GNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVF 160
G + G ++ A F MP RNVV+W+ ++ Y +N + A F
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 161 DEMLH--TGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYS 218
EM+ S P+ T+ L AC SL +L+ G+ +H YI++ +D V +AL ++Y
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 219 KCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTS 278
+CG+LE + F R+ +++V+SW + ISS G G KK ++IF EML+ P T S
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 279 VLSQCCEIQFLELGTQV-HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM-DD 336
VL C +E G ++ +M G + + ++ L + + EA + + M +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 337 ASLVTWNAM-----IAGHAKMMEQSRDNLYA 362
W ++ I G+ ++ E++ L+A
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFA 482
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 21/282 (7%)
Query: 163 MLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGR 222
+L S PS T + + C SL ++H +I+ D D + L +YS G
Sbjct: 68 VLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 127
Query: 223 LEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQ 282
+++A K F + +++ + W A + +G ++ L ++ +M ++ + +T T VL
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 283 C----CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDAS 338
C C + L G ++H+ T+ GY S++ + +L+ +Y + GC+ A +F GM +
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 339 LVTWNAMIAGHAKMMEQSRDNLYACWNGT--EALNLFSKL--NCSGMKLDLFTFSSVLSV 394
+V+W+AMIA +AK NG EAL F ++ + T SVL
Sbjct: 248 VVSWSAMIACYAK-------------NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
Query: 395 CGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
C + A QG+ IH ++ G S + V ++L+ MY +C +
Sbjct: 295 CASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
IS I S GK K+ +R+ LS+ P++ T ++ C L +VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAM-----IAGHAKMM 353
G + + + L+ +Y G + A+ +F ++ WNA+ +AGH
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH---- 158
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA-------FVQGEQ 406
G E L L+ K+N G++ D FT++ VL C VA ++G++
Sbjct: 159 ------------GEEVLGLYWKMNRIGVESDRFTYTYVLKAC---VASECTVNHLMKGKE 203
Query: 407 IHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
IHA + G+ S V + T+L++MY + V AS
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYAS 237
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 128/240 (53%), Gaps = 9/240 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-----HTGSYPSM 172
K G ++DAR+ FD MP RNV++W+ L+ GYV + K A +F EM P+
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
T++ L+AC L +L+ G+ +HAYI KYH++ D +G AL +Y+KCG LE A + F
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 233 I-KEKNVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLE 290
+ +K+V +++A I G + ++F EM S+N+ PN T +L C +
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 291 LG-TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
G + M + G +++ ++ LY + G I EA+ M + ++ W ++++G
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 25/204 (12%)
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYL 317
+ +++ M + + P+ +T +L L LG + H+ G + + VR SLL +
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 318 YLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--MMEQSR------------------ 357
Y G + AQ +F L WN+++ +AK +++ +R
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 358 DNLYACWNGTEALNLFSKL-----NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
+ C EAL+LF ++ N + ++ + FT S+VLS CGR+ A QG+ +HA
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 413 KTGFLSDVIVGTSLINMYIKCASV 436
K D+++GT+LI+MY KC S+
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSL 250
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 140 WTTLMLGYVQN-SRPKH--AFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
W ++ V N S P+ V+ M + P +T L + + L G++ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRL-------------------------------EF 225
I+ + +D D V +L ++YS CG L +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 226 ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-----MQPNEYTLTSVL 280
A K F + E+NVISW+ I+ GK K+ L +F EM ++PNE+T+++VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 281 SQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
S C + LE G VH+ K E ++ + +L+ +Y K G + A+ +F + V
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 341 -TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCS-GMKLDLFTFSSVLSVC 395
++AMI A +Y + E LFS++ S + + TF +L C
Sbjct: 267 KAYSAMICCLA---------MYGLTD--ECFQLFSEMTTSDNINPNSVTFVGILGAC 312
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 4/235 (1%)
Query: 118 KCGNMEDARRAFDHMP--RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
K G M++AR + MP RN V+WT ++ GY ++ R A VF ML P TL
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
L+AC L SL+ GE++ +Y+ ++ S+ NA+ +Y+K G + AL F+ + E
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE 313
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+NV++WT I+ G + L +F M+ ++PN+ T ++LS C + +++LG ++
Sbjct: 314 RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Query: 296 -HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+SM +K G N+ ++ L + G + EA + K M A+ W +++A
Sbjct: 374 FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 144/338 (42%), Gaps = 47/338 (13%)
Query: 94 HGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRP 153
H +++ TG + D G++ A F H P N T++ P
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEP 94
Query: 154 KH---AFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVG 210
A V+ ++ + P T L + + G Q+H ++ + D V
Sbjct: 95 NAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV 154
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNV-------------------------------- 238
L +Y CG L A K F + K+V
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 239 -ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+SWT IS SG+A + + +F ML EN++P+E TL +VLS C ++ LELG ++ S
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
G + + N+++ +Y K G I +A +F+ +++ ++VTW +IAG
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG--------- 325
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
L +G EAL +F+++ +G++ + TF ++LS C
Sbjct: 326 --LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSAC 361
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 124/286 (43%), Gaps = 29/286 (10%)
Query: 183 TSLK----SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
TSLK +LK+ +Q H Y+I ++ D S G L +A F N
Sbjct: 19 TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNT 78
Query: 239 I---SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+ A+S + + ++ ++ + +P+ +T VL + + G Q+
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM--M 353
H G++S++ V L+ +Y G +G+A+ +F M + WNA++AG+ K+ M
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 354 EQSRD--NLYACW------------------NGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
+++R + CW +EA+ +F ++ ++ D T +VLS
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 394 VCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
C + + GE+I + G V + ++I+MY K ++ A
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 12/310 (3%)
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
+M AR F+ M ++V + ++ GY + + P F +F E+L G P T L
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
AC K+L+ G QLH +K +D + V L ++Y++C ++ A F RI E V+
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
+ A I+ + + L +F EM + ++PNE TL SVLS C + L+LG +H
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
K + ++V +L+ ++ K G + +A +F+ M W+AMI +A + + L
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI-KTGFLSD 419
+F ++ ++ D TF +L+ C +G + +Q + K G +
Sbjct: 318 -----------MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS 366
Query: 420 VIVGTSLINM 429
+ S++++
Sbjct: 367 IKHYGSMVDL 376
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 150/304 (49%), Gaps = 5/304 (1%)
Query: 50 SRYRGFQEALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDX 106
SR+ E SL E E+ D+ + LL+ C ++ + + +H MK G ++
Sbjct: 105 SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNV 164
Query: 107 XXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHT 166
+C +++ AR FD + VV + ++ GY + +RP A +F EM
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK 224
Query: 167 GSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFA 226
P+ TL L++C L SL G+ +H Y K+ V AL +++KCG L+ A
Sbjct: 225 YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 227 LKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI 286
+ F++++ K+ +W+A I + + GKA+K + +F M SEN+QP+E T +L+ C
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 287 QFLELGTQVHS-MCTKLGYESNLRVRNSLLYLYLKRGCIGEA-QILFKGMDDASLVTWNA 344
+E G + S M +K G +++ S++ L + G + +A + + K + + W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 345 MIAG 348
++A
Sbjct: 405 LLAA 408
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 132/262 (50%), Gaps = 16/262 (6%)
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL--CSLYSKCGRLEFALKAFKRIK 234
+ ++ C SL+ L Q+ AY IK HI+ + V + C+ + +A F+ +
Sbjct: 34 LLISKCNSLRELM---QIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
E +++ + + + +FVE+L + + P+ YT S+L C + LE G Q
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
+H + KLG + N+ V +L+ +Y + + A+ +F + + +V +NAMI G+A+
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR--- 207
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
++R N EAL+LF ++ +K + T SVLS C + + G+ IH K
Sbjct: 208 RNRPN--------EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 415 GFLSDVIVGTSLINMYIKCASV 436
F V V T+LI+M+ KC S+
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSL 281
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 18/282 (6%)
Query: 119 CGNMEDARRAFDHMPRRNVV---AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
C ++ AR+ FD + +++ W + +GY +N P+ A V+ +ML + P ++
Sbjct: 180 CRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSI 239
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
++AL AC LK L+ G +HA I+K D V N L LY + G + A K F + E
Sbjct: 240 SVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSE 299
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
+NV++W + IS + + +F +M E + + TLT++L C + L G ++
Sbjct: 300 RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEI 359
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H+ K + ++ + NSL+ +Y K G + ++ +F M L +WN M+
Sbjct: 360 HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML--------- 410
Query: 356 SRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSVLSVC 395
N YA NG E +NLF + SG+ D TF ++LS C
Sbjct: 411 ---NCYAI-NGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 138/262 (52%), Gaps = 15/262 (5%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC S KSL G ++ + I+ + + + + L +L+S C RL+ A K F + + +
Sbjct: 138 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 197
Query: 238 VIS---WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+++ W A +G + L ++V+ML ++P ++++ L C +++ L +G
Sbjct: 198 LLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRG 257
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
+H+ K + + V N LL LY++ G +A+ +F GM + ++VTWN++I+ +K +
Sbjct: 258 IHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 317
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
E NLF K+ + T +++L C R+ A + G++IHAQ +K+
Sbjct: 318 VH-----------EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS 366
Query: 415 GFLSDVIVGTSLINMYIKCASV 436
DV + SL++MY KC V
Sbjct: 367 KEKPDVPLLNSLMDMYGKCGEV 388
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 2/271 (0%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ C+D + + +H I+K D + G +DAR+ FD M RNV
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V W +L+ + R F++F +M S TL L AC+ + +L +G+++HA
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
I+K D + N+L +Y KCG +E++ + F + K++ SW ++ +G ++
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422
Query: 258 LRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKLGYESNLRVRNSLLY 316
+ +F M+ + P+ T ++LS C + E G + M T+ L L+
Sbjct: 423 INLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVD 482
Query: 317 LYLKRGCIGEAQILFKGMD-DASLVTWNAMI 346
+ + G I EA + + M S W +++
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 120/228 (52%), Gaps = 2/228 (0%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G + A++ F+ MP +NVV+WTTL+ G+ Q + A + EML G P+ T+A L
Sbjct: 241 GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+AC+ +L SG ++H YI+ I D ++G AL +Y+KCG L+ A F + K+++
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL 360
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSM 298
SWTA I G+ + ++ F +M+ +P+E +VL+ C ++LG SM
Sbjct: 361 SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAM 345
E L+ ++ L + G + EA L + M + L TW A+
Sbjct: 421 RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 157/379 (41%), Gaps = 66/379 (17%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNM----EDA 125
D S +I L+ C D S + VH I++ G C ++ + +
Sbjct: 28 DESHFISLIHACKDTASL---RHVHAQILRRG-----VLSSRVAAQLVSCSSLLKSPDYS 79
Query: 126 RRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL 185
F + RN L+ G +N+R + + F ML G P T L + + L
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK----RIKEKNVISW 241
G LHA +K +D D+ V +L +Y+K G+L+ A + F+ RIK+++++ W
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
I N Y C + + + T +
Sbjct: 200 NVLI--------------------------NGY---------CRAKDMHMATTLFRSMP- 223
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
E N ++L+ Y+ G + A+ LF+ M + ++V+W +I G ++ +
Sbjct: 224 ---ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYE----- 275
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
A++ + ++ G+K + +T ++VLS C + A G +IH + G D
Sbjct: 276 ------TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRA 329
Query: 422 VGTSLINMYIKCASVVCAS 440
+GT+L++MY KC + CA+
Sbjct: 330 IGTALVDMYAKCGELDCAA 348
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 15/249 (6%)
Query: 147 YVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFD 206
Y + + KHAF VF+E S+ + +N K + + + + + +
Sbjct: 171 YAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDM----HMATTLFRSMPERN 226
Query: 207 TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
+ + L Y G L A + F+ + EKNV+SWT I+ +G + + + EML
Sbjct: 227 SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE 286
Query: 267 ENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
+ ++PNEYT+ +VLS C + L G ++H G + + + +L+ +Y K G +
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
A +F M+ +++W AMI G A ++ ++ +A+ F ++ SG K D
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWA---------VHGRFH--QAIQCFRQMMYSGEKPDEV 395
Query: 387 TFSSVLSVC 395
F +VL+ C
Sbjct: 396 VFLAVLTAC 404
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 7/179 (3%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG+I+ G D KCG ++ A F +M +++++WT ++ G+ + R
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGR 374
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYI-IKYHIDFDTSVGN 211
A F +M+++G P L AC + + G + + Y I+
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYV 434
Query: 212 ALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
+ L + G+L A + + + ++ +W A +C KA KG R E +S+N+
Sbjct: 435 LVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRAC----KAHKGYR-RAESVSQNL 488
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 164/374 (43%), Gaps = 47/374 (12%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D+ Y +L+ C + + ++VHG I + + NM ARR F
Sbjct: 143 DAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLF 202
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM-------------------LHTGSY- 169
D M R+ V+W ++ Y AF +FD+M L TG+Y
Sbjct: 203 DRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYV 262
Query: 170 -------------PSMNTLA--IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC 214
S++ +A I L AC+ + +++ G+++H I D +V N L
Sbjct: 263 GALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLI 322
Query: 215 SLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEY 274
++YSKC L AL F++ +E ++ +W + IS K+++ + EML QPN
Sbjct: 323 TMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSI 382
Query: 275 TLTSVLSQCCEIQFLELGTQVHS-MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKG 333
TL S+L C I L+ G + H + + ++ + NSL+ +Y K G I A+ +
Sbjct: 383 TLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDL 442
Query: 334 MDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
M VT+ ++I G+ E G AL LF ++ SG+K D T +VLS
Sbjct: 443 MSKRDEVTYTSLIDGYGNQGE-----------GGVALALFKEMTRSGIKPDHVTVVAVLS 491
Query: 394 VCGRMVAFVQGEQI 407
C +GE++
Sbjct: 492 ACSHSKLVHEGERL 505
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 158/399 (39%), Gaps = 47/399 (11%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL C+D R+F VH H + +G +A+ ++ +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
+ W L+ Y +N + + M+ G P T L AC + G +H
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKK 256
I V NAL S+Y + + A + F R+ E++ +SW A I+ G +
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 257 GLRIFVEMLSENMQPNEYTLTSV-----------------------------------LS 281
+F +M ++ + T + L
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 282 QCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVT 341
C I + LG ++H + Y+ VRN+L+ +Y K + A I+F+ ++ SL T
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 342 WNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAF 401
WN++I+G+A++ + EA +L ++ +G + + T +S+L +C R+
Sbjct: 349 WNSIISGYAQLNKSE-----------EASHLLREMLVAGFQPNSITLASILPLCARIANL 397
Query: 402 VQGEQIHAQTIKTGFLSD-VIVGTSLINMYIKCASVVCA 439
G++ H ++ D ++ SL+++Y K +V A
Sbjct: 398 QHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 24/286 (8%)
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK 231
+++ A L+AC +++ +G Q+HA+ I +++ + + L + YS A +
Sbjct: 43 LHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE 102
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ + W I+S + ++ + + M+S+ ++P+ +T SVL C E +
Sbjct: 103 NSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G VH Y+S+L V N+L+ +Y + +G A+ LF M + V+WNA+I +A
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 352 --MMEQSRDNLYACW-NGTE---------------------ALNLFSKLNCSGMKLDLFT 387
M ++ + W +G E AL L S++ LD
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA 282
Query: 388 FSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
L C + A G++IH I + + V +LI MY KC
Sbjct: 283 MIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKC 328
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 48/367 (13%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
LQ+ I+ + + +H I+KTG D KCG + AR+ FD +P+ +
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ---- 193
A+ ++ GY+++ K + M ++G TL++ L A S S +
Sbjct: 101 SAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR 160
Query: 194 -LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
+HA IIK ++ D + AL Y K G+LE A F+ +K++NV+ T+ IS + G
Sbjct: 161 LVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQG 220
Query: 253 --------------------------------KAKKGLRIFVEMLSENMQPNEYTLTSVL 280
AK+ + +++ M PN T SV+
Sbjct: 221 FVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVI 280
Query: 281 SQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
C + E+G QVH+ K G +++++ +SLL +Y K G I +A+ +F M + ++
Sbjct: 281 GACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA 400
+W +MI G+ K N EAL LF+++ ++ + TF LS C
Sbjct: 341 SWTSMIDGYGK-----------NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 401 FVQGEQI 407
+G +I
Sbjct: 390 VDKGYEI 396
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 143/312 (45%), Gaps = 30/312 (9%)
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
P + + F + S +A AL + + K+G+++HA IIK D ++
Sbjct: 15 PSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIK 74
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L L+ KCG L +A + F + + + ++ IS G K+ L + M + +
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKAD 134
Query: 273 EYTLTSVLSQCCE-----IQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEA 327
YTL+ VL I L VH+ K E + + +L+ Y+K G + A
Sbjct: 135 GYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESA 194
Query: 328 QILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE------------------- 368
+ +F+ M D ++V +MI+G+ M + ++ +N T+
Sbjct: 195 RTVFETMKDENVVCCTSMISGY--MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGE 252
Query: 369 ----ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
+++++ + +G ++ TF+SV+ C + + G+Q+HAQ +K+G + + +G+
Sbjct: 253 TAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGS 312
Query: 425 SLINMYIKCASV 436
SL++MY KC +
Sbjct: 313 SLLDMYAKCGGI 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
Q VH IMK+G + KCG + DARR FD M +NV +WT+++ GY +N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 151 SRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK-YHIDFDTSV 209
P+ A +F M P+ T AL+AC+ + G ++ + + Y +
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 210 GNALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSCGDSGKAK 255
+ L + G L A + + + E+ + W A +SSC G +
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G ++H+ K G++ +L + LL L+LK GC+ A+ +F + +L +N MI+G+ K
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 352 MMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVC---GRMVAFVQG-- 404
+G E L L +++ SG K D +T S VL G + +
Sbjct: 113 -------------HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC 159
Query: 405 EQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+HA+ IK D ++ T+L++ Y+K + A
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESA 194
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 196/442 (44%), Gaps = 95/442 (21%)
Query: 93 VHGHIMKTG-NHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS 151
+HG ++K G ++ D +C ++ A + FD MP+R+ +AW +++ +++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 152 RPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN 211
+ A +F EM +G+ +T+ L C++ + G Q+H Y+++ ++ + S+ N
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS-------------------CG--- 249
+L +YS+ G+LE + K F +K++N+ SW + +SS CG
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 250 --------DSGKAKKGLR-----IFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
SG A KGL + M ++P+ +++S+L E L+LG +H
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG-------- 348
+ ++ V +L+ +Y+K G + A+++F MD ++V WN++++G
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 349 --HAKMMEQSRDNLYA---CWNG-----------TEALNLFSKLNCSGMKLDLFTFSSVL 392
A M+ ++ + WN +AL++ K+ G+ ++ +++++
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 393 SVCGR-------MVAFVQ----------------------------GEQIHAQTIKTGFL 417
S C + + F++ G+++H ++ +
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 418 SDVIVGTSLINMYIKCASVVCA 439
D V T+L++MY K + A
Sbjct: 429 CDAYVATALVDMYGKSGDLQSA 450
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 142/323 (43%), Gaps = 50/323 (15%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LLQ + + +HG+I++ D K G + AR FD M +N
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
+VAW +L+ G SY AC LK E L
Sbjct: 291 IVAWNSLVSGL--------------------SY-----------ACL----LKDAEALMI 315
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSCGDSG 252
+ K I D N+L S Y+ G+ E AL ++KEK NV+SWTA S C +G
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
+ L++F++M E + PN T++++L + L G +VH C + + V
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 313 SLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNL 372
+L+ +Y K G + A +F G+ + SL +WN M+ G+A G E +
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR-----------GEEGIAA 484
Query: 373 FSKLNCSGMKLDLFTFSSVLSVC 395
FS + +GM+ D TF+SVLSVC
Sbjct: 485 FSVMLEAGMEPDAITFTSVLSVC 507
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 191 GEQLHAYIIKYHID-FDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
G +H +IK +D DT V +A Y +C L FA K F + +++ ++W +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
SG +K + +F EM + + T+ +L C + G Q+H +LG ESN+
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR-----DNLYAC- 363
+ NSL+ +Y + G + ++ +F M D +L +WN++++ + K+ D + C
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 364 -------WN-----------GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE 405
WN +A+ + ++ +G+K + SS+L G+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 406 QIHAQTIKTGFLSDVIVGTSLINMYIK 432
IH ++ DV V T+LI+MYIK
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIK 272
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 153/330 (46%), Gaps = 23/330 (6%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNM--EDARR 127
D+ Y LL+ C + +++H HI K G D +CG + DA +
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
F+ M R+ V+W +++ G V+ + A +FDEM S NT+ C +
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR-DLISWNTMLDGYARCREMS- 233
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR--IKEKNVISWTAAI 245
K+ E + + + T V YSK G +E A F + + KNV++WT I
Sbjct: 234 -KAFELFEKMPERNTVSWSTMVMG-----YSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
+ + G K+ R+ +M++ ++ + + S+L+ C E L LG ++HS+ +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
SN V N+LL +Y K G + +A +F + LV+WN M+ G L +
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG-----------LGVHGH 396
Query: 366 GTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
G EA+ LFS++ G++ D TF +VL C
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVLCSC 426
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 27/350 (7%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H I++ HED C A R F+ + NV +L+ + QNS+
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQ 97
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
P AF VF EM G + T L AC+ L + +H +I K + D V NA
Sbjct: 98 PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNA 157
Query: 213 LCSLYSKCGRLEF--ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
L YS+CG L A+K F+++ E++ +SW + + +G+ + R+F EM ++
Sbjct: 158 LIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI 217
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
+ T+ ++C E+ ++ + K+ E N ++++ Y K G + A+++
Sbjct: 218 -SWNTMLDGYARCREM------SKAFELFEKMP-ERNTVSWSTMVMGYSKAGDMEMARVM 269
Query: 331 FKGM--DDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLF 386
F M ++VTW +IAG+A+ G EA L ++ SG+K D
Sbjct: 270 FDKMPLPAKNVVTWTIIIAGYAE-------------KGLLKEADRLVDQMVASGLKFDAA 316
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S+L+ C G +IH+ ++ S+ V +L++MY KC ++
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 4/235 (1%)
Query: 118 KCGNMEDARRAFDHMP--RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
K G+ME AR FD MP +NVV WT ++ GY + K A + D+M+ +G +
Sbjct: 259 KAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV 318
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
L ACT L G ++H+ + + ++ + V NAL +Y+KCG L+ A F I +
Sbjct: 319 ISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ- 294
K+++SW + G G K+ + +F M E ++P++ T +VL C ++ G
Sbjct: 379 KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDY 438
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+SM + L+ L + G + EA + + M + ++V W A++
Sbjct: 439 FYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L C +L +K QLHA II+ ++ D + L S S C + A++ F +++E NV
Sbjct: 26 LPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+ I + + + + +F EM + + +T +L C +L + +H+
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIG--EAQILFKGMDDASLVTWNAMIAGHAKMME 354
KLG S++ V N+L+ Y + G +G +A LF+ M + V+WN+M+ G K E
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 159/316 (50%), Gaps = 18/316 (5%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
A FD +P+R++ + + + ++++ P +F ++ S +T L AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
L ++G Q+HA +IK + T AL +YSK G L +++ F+ ++EK+++SW A
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
+S +GK K+ L +F M E ++ +E+TL+SV+ C ++ L+ G QVH+M G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ + + +++ Y G I EA ++ ++ V N++I+G +
Sbjct: 217 DL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNR---------- 265
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
N EA L S+ + ++ SS L+ C G+QIH ++ GF+SD +
Sbjct: 266 -NYKEAFLLMSR-----QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 424 TSLINMYIKCASVVCA 439
L++MY KC +V A
Sbjct: 320 NGLMDMYGKCGQIVQA 335
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 22/347 (6%)
Query: 64 EGTEEVDSSFYIPLLQQCIDKRSFSDT-QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNM 122
+ ++ S + P+L C S+ +T + VH ++K G K G++
Sbjct: 77 RASPDLSSHTFTPVLGAC-SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHL 135
Query: 123 EDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNAC 182
D+ R F+ + +++V+W L+ G+++N + K A VF M S TL+ + C
Sbjct: 136 VDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTC 195
Query: 183 TSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISW 241
SLK L+ G+Q+HA ++ D +G A+ S YS G + A+K + + + +
Sbjct: 196 ASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML 254
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ IS C + K+ +L +PN L+S L+ C + L +G Q+H + +
Sbjct: 255 NSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALR 309
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
G+ S+ ++ N L+ +Y K G I +A+ +F+ + S+V+W +MI +A
Sbjct: 310 NGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYA----------- 358
Query: 362 ACWNGTEALNLFSKL--NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
+G +AL +F ++ SG+ + TF V+S C +G++
Sbjct: 359 VNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKE 405
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V +L+ G ++N K AF +L + P++ L+ +L C+ L G+Q+H
Sbjct: 252 VMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCV 306
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
++ D+ + N L +Y KCG++ A F+ I K+V+SWT+ I + +G K
Sbjct: 307 ALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKA 366
Query: 258 LRIFVEMLSE--NMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
L IF EM E + PN T V+S C ++ G + M
Sbjct: 367 LEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM 409
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 165/402 (41%), Gaps = 87/402 (21%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
DS L + C + +F + +H +G D +CG M DAR+ F
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 130 DHMPRR-----------------------------------NVVAWTTLMLGYVQNSRPK 154
D M + N+V+W ++ G+ ++ K
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 155 HAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC 214
A +F ++ H G P T++ L + + L G +H Y+IK + D V +A+
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 215 SLYSKCGRL-------------------------------EFALKAFKRIKEK----NVI 239
+Y K G + + AL+ F+ KE+ NV+
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
SWT+ I+ C +GK + L +F EM ++PN T+ S+L C I L G H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG---HAKMMEQS 356
++ N+ V ++L+ +Y K G I +QI+F M +LV WN+++ G H K
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK----- 469
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRM 398
E +++F L + +K D +F+S+LS CG++
Sbjct: 470 ---------AKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 157/406 (38%), Gaps = 59/406 (14%)
Query: 90 TQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQ 149
T H I+K+G D DA +P + ++++L+ +
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 150 NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
+ VF M G P + L C L + K G+Q+H +D D V
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 210 GNALCSLYSKCGRLEFALKAFKRIKEK--------------------------------- 236
++ +Y +CGR+ A K F R+ +K
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 237 --NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
N++SW +S SG K+ + +F ++ P++ T++SVL + + L +G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--- 351
+H K G + V ++++ +Y K G + LF + NA I G ++
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 352 ----------MMEQSRDNLYACW---------NG--TEALNLFSKLNCSGMKLDLFTFSS 390
EQ+ + W NG EAL LF ++ +G+K + T S
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 391 VLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+L CG + A G H ++ L +V VG++LI+MY KC +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
NVV+WT+++ G QN + A +F EM G P+ T+ L AC ++ +L G H
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
+ ++ H+ + VG+AL +Y+KCGR+ + F + KN++ W + ++ GKAK
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAK 471
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT-KLGYESNLRVRNSL 314
+ + IF ++ ++P+ + TS+LS C ++ + G + M + + G + L + +
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCM 531
Query: 315 LYLYLKRGCIGEAQILFKGMD-DASLVTWNAMI 346
+ L + G + EA L K M + W A++
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 75 IP-LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
IP +L C + + + HG ++ ++ KCG + ++ F+ MP
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+N+V W +LM G+ + + K +F+ ++ T P + L+AC + G +
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 194 LHAYII-KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSC 248
+ +Y I + + +L + G+L+ A K + E + W A ++SC
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 158/346 (45%), Gaps = 19/346 (5%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTG--NHEDXXXXXXXXXXXXKCGNMEDARRAFDHM 132
+ +LQ C S + +H H++ G +H G++ A+ FDH
Sbjct: 9 VRMLQGC---NSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 133 PRRNVVA-WTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACTSLKSLKS 190
+ W L+ G+ +S P ++ ++ ML + S P + T AL +C +KS+
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
++H +I+ D V +L YS G +E A K F + ++++SW I
Sbjct: 126 CLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
G + L ++ M +E + + YTL ++LS C + L +G +H + + ES + V
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 245
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
N+L+ +Y K G + A +F GM ++TWN+MI G+ +G EA+
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYG-----------VHGHGVEAI 294
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
+ F K+ SG++ + TF +L C +G + H + + + F
Sbjct: 295 SFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQF 339
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL---CSLYSKCGRLEFALKAFKRIK- 234
L C S+K L+ ++H+++I + S+ N L C++ S G L A F
Sbjct: 12 LQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAV-SVTGSLSHAQLLFDHFDS 67
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEML-SENMQPNEYTLTSVLSQCCEIQFLELGT 293
+ + W I +S + + ML S +P+ +T L C I+ +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 294 QVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIA--GHAK 351
++H + G+ + V SL+ Y G + A +F M LV+WN MI H
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
+ Q AL+++ ++ G+ D +T ++LS C + A G +H
Sbjct: 188 LHNQ-------------ALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA 234
Query: 412 IKTGFLSDVIVGTSLINMYIKCASV 436
S V V +LI+MY KC S+
Sbjct: 235 CDIRCESCVFVSNALIDMYAKCGSL 259
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 322 GCIGEAQILFKGMD-DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN---LFSKLN 377
G + AQ+LF D D S WN +I G + N + LN ++++
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFS--------------NSSSPLNSILFYNRML 98
Query: 378 CSGM-KLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S + + DLFTF+ L C R+ + + +IH I++GFL D IV TSL+ Y SV
Sbjct: 99 LSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSV 158
Query: 437 VCAS 440
AS
Sbjct: 159 EIAS 162
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 4/238 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+CG++ AR+ F+ MP R+ +AW ++ GY Q + A +VF M G + +
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+ACT L +L G H+YI + I + L LY+KCG +E A++ F ++EKN
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VH 296
V +W++A++ +G +K L +F M + + PN T SVL C + F++ G +
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFD 365
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAGHAKMM 353
SM + G E L L+ LY + G + +A + + M W++++ HA M
Sbjct: 366 SMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL--HASRM 421
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 45/328 (13%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS--YPSMNTLAIAL 179
++ A + D + + A +++ + ++ P+ +F + +L +G+ P T+ +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLY---------------------- 217
ACT L+ ++G Q+H I+ D D V L SLY
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 218 ---------SKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
++CG + FA K F+ + E++ I+W A IS G++++ L +F M E
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
++ N + SVLS C ++ L+ G HS + + +R+ +L+ LY K G + +A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
+F GM++ ++ TW++ + G A N + G + L LFS + G+ + TF
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAM-------NGF----GEKCLELFSLMKQDGVTPNAVTF 344
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
SVL C +V FV Q H +++ F
Sbjct: 345 VSVLRGCS-VVGFVDEGQRHFDSMRNEF 371
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 138/309 (44%), Gaps = 53/309 (17%)
Query: 163 MLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYI-IKYHIDFDTSVGNALCSL-YSKC 220
M G +P++ L + + K Q+HA + + + D VG+ + ++ S
Sbjct: 1 MSRIGKHPAIALLDSGI-------TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDH 53
Query: 221 GRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS--ENMQPNEYTLTS 278
L++A + R ++ + + + I + S +K + +LS +++P+ YT+
Sbjct: 54 KYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNF 113
Query: 279 VLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGE------------ 326
++ C ++ E G QVH M + G++++ V+ L+ LY + GC+
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 327 -------------------AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
A+ LF+GM + + WNAMI+G+A++ E
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESR----------- 222
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLI 427
EALN+F + G+K++ SVLS C ++ A QG H+ + V + T+L+
Sbjct: 223 EALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLV 282
Query: 428 NMYIKCASV 436
++Y KC +
Sbjct: 283 DLYAKCGDM 291
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ CI +HG I G D C N DA + FD +P+R+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEM---LHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
V+W L Y++N R + +FD+M + P T +AL AC +L +L G+Q+
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA 254
H +I + + ++ N L S+YS+CG ++ A + F ++E+NV+SWTA IS +G
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
K+ + F EML + P E TLT +LS C
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 17/283 (6%)
Query: 127 RAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLA--IALNACTS 184
R F + T++ + + P F +F + S P+ N L+ AL C
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPA-NPLSSSFALKCCIK 125
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
L G Q+H I D+ + L LYS C A K F I +++ +SW
Sbjct: 126 SGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVL 185
Query: 245 ISSCGDSGKAKKGLRIFVEMLSEN---MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
S + + + L +F +M ++ ++P+ T L C + L+ G QVH +
Sbjct: 186 FSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDE 245
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
G L + N+L+ +Y + G + +A +F GM + ++V+W A+I+G A N +
Sbjct: 246 NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM-------NGF 298
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQG 404
G EA+ F+++ G+ + T + +LS C +G
Sbjct: 299 ----GKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEG 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 92/232 (39%), Gaps = 13/232 (5%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
LQ C + + + VH I + G +CG+M+ A + F M RNV
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V+WT L+ G N K A F+EML G P TL L+AC+ + G
Sbjct: 284 VSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDR 343
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK----EKNVISWTAAISSCGDSGK 253
+ ++ + C + GR KA+ IK + + W + +C G
Sbjct: 344 MRSGEFKIKPNLHHYGC-VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD 402
Query: 254 AKKGLRI---FVEMLSEN-----MQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+ G R+ +E+ +E + N Y+ + E++ L ++H+
Sbjct: 403 VELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHT 454
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 147/318 (46%), Gaps = 17/318 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VHG +KTG + + A + F+ + +++V W T++ Y Q
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
K A V+ M G P T L L L E + A IIK+ + + NA
Sbjct: 370 GKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNA 426
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ-- 270
L S YSK G++E A F+R KN+ISW A IS +G +GL F +L ++
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P+ YTL+++LS C L LG+Q H+ + G + N+L+ +Y + G I + +
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKL-DLFTFS 389
F M + +V+WN++I+ +++ E G A+N + + G + D TFS
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGE-----------GENAVNTYKTMQDEGKVIPDAATFS 595
Query: 390 SVLSVCGRMVAFVQGEQI 407
+VLS C +G +I
Sbjct: 596 AVLSACSHAGLVEEGLEI 613
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 170/367 (46%), Gaps = 23/367 (6%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH-- 131
+ +L C D S + VH ++K G C + DA F+
Sbjct: 193 FATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETD 251
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
+ R+ V + ++ G R + + VF +ML P+ T + +C+ G
Sbjct: 252 VAVRDQVTFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---G 307
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
Q+H IK + T V NA ++YS A K F+ ++EK++++W ISS +
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
K + ++ M ++P+E+T S+L+ ++ LE+ V + K G S + +
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEIS 424
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
N+L+ Y K G I +A +LF+ +L++WNA+I+G Y E L
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG-----------FYHNGFPFEGLE 473
Query: 372 LFSKLNCSGMKL--DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
FS L S +++ D +T S++LS+C + + G Q HA ++ G + ++G +LINM
Sbjct: 474 RFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINM 533
Query: 430 YIKCASV 436
Y +C ++
Sbjct: 534 YSQCGTI 540
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 157/322 (48%), Gaps = 30/322 (9%)
Query: 118 KCGNMEDARRAFDHMPRRNVVA-WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLA 176
K G++E A FD MP R+ VA W ++ G ++ + + +F EM G A
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR--IK 234
L+ C SL G+Q+H+ +IK +SV NAL ++Y C + A F+ +
Sbjct: 195 TILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 235 EKNVISWTAAISSCGDSG-KAKKGLRIFVEMLSENMQPNEYTLTSVLSQC-CEIQFLELG 292
++ +++ I G +G K + L +F +ML +++P + T SV+ C C +G
Sbjct: 254 VRDQVTFNVVID--GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA----AMG 307
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH--A 350
QVH + K GYE V N+ + +Y G A +F+ +++ LVTWN MI+ + A
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 351 KMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
K+ G A++++ +++ G+K D FTF S+L+ + E + A
Sbjct: 368 KL-------------GKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQAC 411
Query: 411 TIKTGFLSDVIVGTSLINMYIK 432
IK G S + + +LI+ Y K
Sbjct: 412 IIKFGLSSKIEISNALISAYSK 433
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 123/246 (50%), Gaps = 4/246 (1%)
Query: 91 QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN 150
++V I+K G K G +E A F+ R+N+++W ++ G+ N
Sbjct: 406 EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN 465
Query: 151 SRPKHAFHVFDEMLHTGS--YPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
P F +L + P TL+ L+ C S SL G Q HAY++++ +T
Sbjct: 466 GFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL 525
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
+GNAL ++YS+CG ++ +L+ F ++ EK+V+SW + IS+ G+ + + + M E
Sbjct: 526 IGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEG 585
Query: 269 -MQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
+ P+ T ++VLS C +E G ++ +SM G N+ + L+ L + G + E
Sbjct: 586 KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDE 645
Query: 327 AQILFK 332
A+ L K
Sbjct: 646 AESLVK 651
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 51/322 (15%)
Query: 144 MLGYVQNSRPKHAFHVFDEMLH-TGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH 202
+ G ++ ++A +F ++ T P ++++A+ L+ G Q+H Y I+
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 203 IDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT-------------------- 242
+ + V N L SLY + G L K F I E +V SWT
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 243 ------------AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
A I+ C +SG + + +F EM ++ +++ ++LS C+ L+
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM-CDYGSLD 206
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA--SLVTWNAMIAG 348
G QVHS+ K G+ V N+L+ +Y + +A ++F+ D A VT+N +I G
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
A RD E+L +F K+ + ++ TF SV+ C G Q+H
Sbjct: 267 LAGF---KRD---------ESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVH 311
Query: 409 AQTIKTGFLSDVIVGTSLINMY 430
IKTG+ +V + + MY
Sbjct: 312 GLAIKTGYEKYTLVSNATMTMY 333
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 251 SGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
SG+ + L++F ++ ++P++Y+++ ++ ++ G QVH + G +
Sbjct: 34 SGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSH 93
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME-----------QSRD 358
V N+LL LY + G + + F +D+ + +W +++ K+ + RD
Sbjct: 94 VSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERD 153
Query: 359 NLYACWNG-----------TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
++ A WN ++ LF +++ G++ D F F+++LS+C + G+Q+
Sbjct: 154 DV-AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLDFGKQV 211
Query: 408 HAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
H+ IK GF V +LI MY C VV A
Sbjct: 212 HSLVIKAGFFIASSVVNALITMYFNCQVVVDA 243
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL C+ S H ++++ G ++ +CG ++++ F+ M ++
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSLKSGEQLH 195
VV+W +L+ Y ++ ++A + + M G P T + L+AC+ ++ G ++
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 196 AYIIKYH-IDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS----WTAAISSCGD 250
++++H + + + L L + G L+ A ++ +I EK + S W A S+C
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEA-ESLVKISEKTIGSRVDVWWALFSACAA 673
Query: 251 SGKAKKGLRIFVEMLSENMQPN 272
G K G ++ ++L E + +
Sbjct: 674 HGDLKLG-KMVAKLLMEKEKDD 694
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 7/302 (2%)
Query: 54 GFQEALSLAKEGTEEVDSSF--YIPLLQQCIDKRSFSDTQIVHGHIMKTGNH-EDXXXXX 110
G + L + KE E++ S+ + L+ C+ FS + +H ++K G D
Sbjct: 97 GLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQT 156
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
+ + DAR+ FD +P+ +VV W LM GYV+ VF EML G P
Sbjct: 157 GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGNALCSLYSKCGRLEFALKA 229
++ AL AC + +L G+ +H ++ K I+ D VG AL +Y+KCG +E A++
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQF 288
F+++ +NV SW A I G AKK + E+ ++P+ L VL+ C F
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 289 LELG-TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVT-WNAMI 346
LE G T + +M + G + ++ L + G + +A L + M L + W A++
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 347 AG 348
G
Sbjct: 397 NG 398
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 169 YPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRL----E 224
+ S +L +A C ++K +KS H+ I + + +T + L + + L
Sbjct: 8 HQSWKSLILASQRCNTVKQIKST---HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFH 64
Query: 225 FALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML---SENMQPNEYTLTSVLS 281
+A F I+ N + I C S + GLR F+ M+ E++ P+ T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 282 QCCEIQFLELGTQVHSMCTKLG-YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
C + F +G Q+H K G + S+ V+ +L +Y++ + +A+ +F + +V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA 400
W+ ++ G+ + C G+E L +F ++ G++ D F+ ++ L+ C ++ A
Sbjct: 185 KWDVLMNGYVR-----------CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGA 233
Query: 401 FVQGEQIHAQTIKTGFL-SDVIVGTSLINMYIKCASVVCA 439
QG+ IH K ++ SDV VGT+L++MY KC + A
Sbjct: 234 LAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETA 273
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS---YPSMNTLAIALNA 181
A FD + N + T++ ++S+P F M+ PS T + A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
C G+Q+H +++K + D V + +Y + L A K F I + +V+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W ++ G +GL +F EML ++P+E+++T+ L+ C ++ L G +H
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 301 KLGY-ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
K + ES++ V +L+ +Y K GCI A +F+ + ++ +W A+I G+A
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYA 296
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 118/226 (52%), Gaps = 4/226 (1%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAI 177
G +++A+ FD MP R+VV+W ++ Y VF++ML + P TL
Sbjct: 250 AGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC SL SL GE +H YI K+ I+ + + AL +YSKCG+++ AL+ F+ +++
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRD 369
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V +W + IS G K L IF EM+ E +PN T VLS C + L+ ++
Sbjct: 370 VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE 429
Query: 298 MCTKL-GYESNLRVRNSLLYLYLKRGCIGEAQILFKGM--DDASLV 340
M + + E + ++ L + G I EA+ L + D+AS++
Sbjct: 430 MMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASIL 475
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 152/372 (40%), Gaps = 58/372 (15%)
Query: 71 SSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFD 130
SS +P+L +S ++ Q H ++KTG D N E ++
Sbjct: 36 SSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAAT--NPEPKTVSYA 93
Query: 131 H-----MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL 185
H + N +++ Y +S P+ A VF EML +P + L AC +
Sbjct: 94 HSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAF 153
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
+ G Q+H IK + D V N L ++Y + G E A K R+ ++ +SW + +
Sbjct: 154 CGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
S+ + G + +F EM E
Sbjct: 214 SAYLEKGLVDEARALFDEM---------------------------------------EE 234
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
N+ N ++ Y G + EA+ +F M +V+WNAM+ +A + C+N
Sbjct: 235 RNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV---------GCYN 285
Query: 366 GTEALNLFSK-LNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
E L +F+K L+ S K D FT SVLS C + + QGE +H K G + + T
Sbjct: 286 --EVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT 343
Query: 425 SLINMYIKCASV 436
+L++MY KC +
Sbjct: 344 ALVDMYSKCGKI 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 2/209 (0%)
Query: 64 EGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNME 123
+ TE+ D + +L C S S + VH +I K G + KCG ++
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
A F +R+V W +++ + K A +F EM++ G P+ T L+AC
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN 416
Query: 184 SLKSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISW 241
+ L +L + Y ++ + L + G++E A + I ++ I
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILL 476
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
+ + +C G+ ++ RI +L N++
Sbjct: 477 ESLLGACKRFGQLEQAERIANRLLELNLR 505
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 154/363 (42%), Gaps = 45/363 (12%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y+ LQ C R+ + + +H HI+K G + KCG A + FD MP
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 134 RRNVVAWTTLMLGYVQ-NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGE 192
R+ +AW +++ Q N K +G P + + AC +L S+ G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
Q+H + I D V ++L +Y+KCG L A F I+ KN ISWTA +S SG
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 253 KAKKGLR-------------------------------IFVEMLSENMQP-NEYTLTSVL 280
+ ++ L +F EM E + + L+S++
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 281 SQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
C + G QVH + LG++S + + N+L+ +Y K + A+ +F M +V
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA 400
+W ++I G A+ + + AL L+ + G+K + TF ++ C V
Sbjct: 306 SWTSLIVGMAQHGQAEK-----------ALALYDDMVSHGVKPNEVTFVGLIYACSH-VG 353
Query: 401 FVQ 403
FV+
Sbjct: 354 FVE 356
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 146/284 (51%), Gaps = 24/284 (8%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L C ++L + + LHA+I+K I + N L ++Y KCG AL+ F + ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
I+W + +++ + + K L +F + S + ++P+++ ++++ C + ++ G QVH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK------ 351
Y ++ V++SL+ +Y K G + A+ +F + + ++W AM++G+AK
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 352 MMEQSR----DNLYACWN-----------GTEALNLFSKLNCSGMK-LDLFTFSSVLSVC 395
+E R NLY+ W G EA ++F+++ + LD SS++ C
Sbjct: 190 ALELFRILPVKNLYS-WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 396 GRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+ A + G Q+H I GF S V + +LI+MY KC+ V+ A
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAA 292
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 5/235 (2%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G E+A F +P +N+ +WT L+ G+VQ+ + AF VF EM ++ L +
Sbjct: 183 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE-RVDILDPLVL 241
Query: 178 A--LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ + AC +L + +G Q+H +I D + NAL +Y+KC + A F R++
Sbjct: 242 SSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRH 301
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
++V+SWT+ I G+A+K L ++ +M+S ++PNE T ++ C + F+E G ++
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 361
Query: 296 -HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
SM G +L+ LL L + G + EA+ L M TW A+++
Sbjct: 362 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VHG ++ G KC ++ A+ F M R+VV+WT+L++G Q+ +
Sbjct: 260 VHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQ 319
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK-YHIDFDTSVGN 211
+ A ++D+M+ G P+ T + AC+ + ++ G +L + K Y I
Sbjct: 320 AEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYT 379
Query: 212 ALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGKAKKGLRIFVEMLS--EN 268
L L + G L+ A + + +W A +S+C G+ + G+RI ++S +
Sbjct: 380 CLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKL 439
Query: 269 MQPNEYTLTS 278
P+ Y L S
Sbjct: 440 KDPSTYILLS 449
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 172/431 (39%), Gaps = 94/431 (21%)
Query: 52 YRGFQEALSLAKEGTEEVDSSFYIPL-LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX 110
YRG ++ L +G + +PL L+ C F + H +++ G E+
Sbjct: 146 YRGMRQR-GLTGDG-------YILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVN 197
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH----- 165
K G M DA F MP RN ++W ++ G+ Q + A +F+ M
Sbjct: 198 ELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKP 257
Query: 166 ------------------------------TGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+G+ S LA+ + C L++L E++H
Sbjct: 258 DEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVH 317
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK------------------- 236
Y+IK + NAL +Y K G+++ A F++I+ K
Sbjct: 318 GYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLD 377
Query: 237 --------------------NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTL 276
NV++WT+ I C G+ L F +M + N T+
Sbjct: 378 EALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTI 437
Query: 277 TSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD 336
+LS C E+ L LG ++H + N+ V+N+L+ +Y K G + E ++F+ + D
Sbjct: 438 CCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD 497
Query: 337 ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
L++WN++I G+ + +A +AL++F ++ SG D +VLS C
Sbjct: 498 KDLISWNSIIKGYGM-------HGFA----EKALSMFDRMISSGFHPDGIALVAVLSACS 546
Query: 397 RMVAFVQGEQI 407
+G +I
Sbjct: 547 HAGLVEKGREI 557
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 156/383 (40%), Gaps = 66/383 (17%)
Query: 118 KCGNMEDARRAFDHMPR---RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
+ G + DAR F+ + ++ W +++ V + ++A ++ M G
Sbjct: 101 RLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYI 160
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
L + L AC L H +I+ + + V N L +LY K GR+ A F +
Sbjct: 161 LPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMP 220
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS------------- 281
+N +SW I + ++IF M E +P+E T TSVLS
Sbjct: 221 VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLK 280
Query: 282 ----------------------QCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYL 319
C E++ L + +VH K G+E L RN+L+++Y
Sbjct: 281 YFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYG 340
Query: 320 KRGCIGEAQILFKGMDDASLVTWNAMIAGHAK---------MMEQSRDNLYAC------- 363
K+G + +A+ LF+ + + + +WN++I + + + + C
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 364 -WN-----------GTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
W G ++L F ++ S + + T +LS+C + A G +IH
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 412 IKTGFLSDVIVGTSLINMYIKCA 434
I+T +++V +L+NMY KC
Sbjct: 461 IRTSMSENILVQNALVNMYAKCG 483
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 123/294 (41%), Gaps = 40/294 (13%)
Query: 81 CIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR----- 135
C + + S + VHG+++K G E K G ++DA F + +
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 136 ----------------------------------NVVAWTTLMLGYVQNSRPKHAFHVFD 161
NVV WT+++ G R + F
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 162 EMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG 221
+M + + T+ L+ C L +L G ++H ++I+ + + V NAL ++Y+KCG
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Query: 222 RLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
L F+ I++K++ISW + I G G A+K L +F M+S P+ L +VLS
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 282 QCCEIQFLELGTQV-HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
C +E G ++ +SM + G E ++ L + G + EA + K M
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 120/308 (38%), Gaps = 46/308 (14%)
Query: 157 FHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT-SVGNALCS 215
FH FD +L L + C Q+HA ++ F + S+ L S
Sbjct: 56 FHYFDHLL---------GLCLTAQQC---------RQVHAQVLLSDFIFRSGSLAANLIS 97
Query: 216 LYSKCGRLEFALKAFKRIKE---KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+Y++ G L A F+ + ++ W + + + G + L ++ M + +
Sbjct: 98 VYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD 157
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
Y L +L C + L H+ ++G + NL V N LL LY K G +G+A LF
Sbjct: 158 GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFV 217
Query: 333 GMDDASLVTWNAMIAGHA---------KMMEQSRDNLYA---------------CWNGTE 368
M + ++WN MI G + K+ E + + C +
Sbjct: 218 EMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFED 277
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
L F + SG + + SVC + A E++H IK GF + +LI+
Sbjct: 278 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 337
Query: 429 MYIKCASV 436
+Y K V
Sbjct: 338 VYGKQGKV 345
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 143/298 (47%), Gaps = 28/298 (9%)
Query: 163 MLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT-SVGNALCSLYSKCG 221
M +GS L + C++++ LK Q+HA +IK + DT + L +
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMRELK---QIHASLIKTGLISDTVTASRVLAFCCASPS 72
Query: 222 RLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML--SENMQPNEYTLTSV 279
+ +A F RI KN W I S + + IF++ML S +++P T SV
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 280 LSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL 339
+ G Q+H M K G E + +RN++L++Y+ GC+ EA +F GM +
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 340 VTWNAMIAGHAK--MMEQSRDNLY--------ACWNGT-----------EALNLFSKLNC 378
V WN+MI G AK +++Q++ NL+ WN +AL++F ++
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQ-NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE 251
Query: 379 SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+K D FT S+L+ C + A QG IH ++ F + IV T+LI+MY KC +
Sbjct: 252 KDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 155/360 (43%), Gaps = 53/360 (14%)
Query: 74 YIPLLQ-QCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXX-XKCGNMEDARRAFDH 131
Y+ L+ QC R +H ++KTG D +M A F
Sbjct: 27 YLRLIDTQCSTMRELKQ---IHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTR 83
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS--YPSMNTLAIALNACTSLKSLK 189
+ +N W T++ G+ ++S P+ A +F +ML + P T A L +
Sbjct: 84 INHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQAR 143
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLY-------------------------------S 218
G QLH +IK ++ D+ + N + +Y +
Sbjct: 144 DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 219 KCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTS 278
KCG ++ A F + ++N +SW + IS +G+ K L +F EM ++++P+ +T+ S
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 279 VLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDAS 338
+L+ C + E G +H + +E N V +L+ +Y K GCI E +F+
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 339 LVTWNAMIAGHAKMMEQSRDNLYACWNGTE--ALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
L WN+MI G A NG E A++LFS+L SG++ D +F VL+ C
Sbjct: 324 LSCWNSMILGLAN-------------NGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 2/237 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG ++ A+ FD MP+RN V+W +++ G+V+N R K A +F EM P T+
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
LNAC L + + G +H YI++ + ++ V AL +Y KCG +E L F+ +K
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+ W + I ++G ++ + +F E+ ++P+ + VL+ C + +
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 298 -MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAGHAKM 352
M K E +++ ++ + G + EA+ L K M + V W+++++ K+
Sbjct: 384 LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKI 440
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 135/276 (48%), Gaps = 20/276 (7%)
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
N E A+ FD MP ++ +W T++ GY + + A +F M+ S N +
Sbjct: 139 NFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV-SWNAMISGYI 197
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVI 239
C L+ ++ K A+ + Y K ++E A FK + KN++
Sbjct: 198 ECGDLEKA-------SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
+W A IS ++ + + GL++F ML E ++PN L+S L C E+ L+LG Q+H +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+K +++ SL+ +Y K G +G+A LF+ M +V WNAMI+G+A+
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG------ 364
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
N +AL LF ++ + ++ D TF +VL C
Sbjct: 365 -----NADKALCLFREMIDNKIRPDWITFVAVLLAC 395
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
Query: 118 KCGNMEDARRAFDHMP-RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLA 176
K +E A F M +N+V W ++ GYV+NSRP+ +F ML G P+ + L+
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
AL C+ L +L+ G Q+H + K + D + +L S+Y KCG L A K F+ +K+K
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG-TQV 295
+V++W A IS G A K L +F EM+ ++P+ T +VL C + +G
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
SM E ++ L + G + EA L + M
Sbjct: 409 ESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQN-SRPKHAFHVFDEMLHTGSYPSMNTLA 176
+ G+++ A R F M +N + W +L++G ++ SR A +FDE+ P +T +
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI------PEPDTFS 126
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
N + S Y + E A F R+ K
Sbjct: 127 Y---------------------------------NIMLSCYVRNVNFEKAQSFFDRMPFK 153
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+ SW I+ G+ +K +F M M+ NE + +++S E LE +
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFF 209
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAGHAKMMEQ 355
+ G + +++ Y+K + A+ +FK M + +LVTWNAMI+G+ +E
Sbjct: 210 KVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY---VEN 262
Query: 356 SRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
SR + L LF + G++ + SS L C + A G QIH K+
Sbjct: 263 SRPE--------DGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKST 314
Query: 416 FLSDVIVGTSLINMYIKCASV 436
+DV TSLI+MY KC +
Sbjct: 315 LCNDVTALTSLISMYCKCGEL 335
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 169/348 (48%), Gaps = 19/348 (5%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH +K G +D + G + + FD + ++V+ W +++ QN R
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A +F EM+H G+ TL +A +A +SL + LH I+ + D+S+ NA
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L +LY+K L A F ++ ++++SW ++ C +G +K L+ F M + +
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY--ESNLRVRNSLLYLYLKRGCIGEAQIL 330
T + V+S C I+ L LG +H + K GY E+++ V NS++ +Y K G A+ +
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
Query: 331 FKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKL-NCSGMKLDLFT 387
F+ + +++ NA++ G A NG EA + +++ + ++ D+ T
Sbjct: 349 FEELVCRDVISSNAILNGFAA-------------NGMFEEAFGILNQMQSVDKIQPDIAT 395
Query: 388 FSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI-VGTSLINMYIKCA 434
S+ S+CG + +G +H T++ S + V S+I+MY KC
Sbjct: 396 VVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG 443
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 163/381 (42%), Gaps = 38/381 (9%)
Query: 67 EEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXX--XXXXXXXKCGNMED 124
+E D+ + ++ C + + +HG ++K+G + KCG+ E
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACT 183
A F+ + R+V++ ++ G+ N + AF + ++M P + T+ + C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDT-SVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
L + G +H Y ++ + V N++ +Y KCG A FK ++++SW
Sbjct: 405 DLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWN 464
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSV---LSQCCEIQFLELGTQVHSMC 299
+ IS+ +G K +F E++SE ++++L++V L+ C L G VH
Sbjct: 465 SMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
KLG L +L+ + E + L +WN++I+G A
Sbjct: 524 QKLG---------DLTSAFLRLETMSETR---------DLTSWNSVISGCA--------- 556
Query: 360 LYACWNGTEALNLFSKLNCSG-MKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
+ + E+L F ++ G ++ DL T +S G + +QG H IK+
Sbjct: 557 --SSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLREL 614
Query: 419 DVIVGTSLINMYIKCASVVCA 439
D + +LI MY +C + A
Sbjct: 615 DTQLQNTLITMYGRCKDIESA 635
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 37/321 (11%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML--HTGSYPSMNTL 175
KCG A F R++V+W +++ + QN A ++F E++ ++ S S++T+
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
L +C S SL G+ +H ++ K G L A + + E
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWL-------------------QKLGDLTSAFLRLETMSE 541
Query: 236 -KNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGT 293
+++ SW + IS C SG + LR F M E ++ + TL +S + + G
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 294 QVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMM 353
H + K E + +++N+L+ +Y + I A +F + D +L +WN +I+ +
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISA----L 657
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
Q++ G E LF L ++ + TF +LS ++ + G Q H I+
Sbjct: 658 SQNKA-------GREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR 707
Query: 414 TGFLSDVIVGTSLINMYIKCA 434
GF ++ V +L++MY C
Sbjct: 708 RGFQANPFVSAALVDMYSSCG 728
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 17/281 (6%)
Query: 118 KCGNMEDARRAFDHMPR-RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP-SMNTL 175
K G++ A + M R++ +W +++ G + + F M G + TL
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL 584
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
++A +L + G H IK + DT + N L ++Y +C +E A+K F I +
Sbjct: 585 LGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
N+ SW IS+ + ++ ++F + ++PNE T +LS ++ G Q
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQA 701
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
H + G+++N V +L+ +Y G + +F+ S+ WN++I+ H
Sbjct: 702 HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFH--- 758
Query: 356 SRDNLYACWNGTEALNLFSKLNC-SGMKLDLFTFSSVLSVC 395
G +A+ LF +L+ S M+ + +F S+LS C
Sbjct: 759 --------GMGEKAMELFKELSSNSEMEPNKSSFISLLSAC 791
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 6/258 (2%)
Query: 94 HGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRP 153
HG +K+ D +C ++E A + F + N+ +W ++ QN
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 663
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
+ F +F + P+ T L+A T L S G Q H ++I+ + V AL
Sbjct: 664 REVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 720
Query: 214 CSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPN 272
+YS CG LE +K F+ ++ +W + IS+ G G +K + +F E+ S + M+PN
Sbjct: 721 VDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPN 780
Query: 273 EYTLTSVLSQCCEIQFLELGTQVH-SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+ + S+LS C F++ G + M K G + R ++ + + G + EA
Sbjct: 781 KSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFI 840
Query: 332 KGMDDASLV-TWNAMIAG 348
G+ + W A+++
Sbjct: 841 TGIGEPQKAGVWGALLSA 858
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 151/347 (43%), Gaps = 60/347 (17%)
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
+N A D + GS +T L +C S+ G LHA + + D
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLF-TEPDVF 116
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN 268
V L S+Y+KCG + A K F ++E+N+ +W+A I + + ++ ++F M+ +
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
+ P+++ +L C +E G +HS+ KLG S LRV NS+L +Y K G + A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 329 ILFKGMDD-----------------------------------ASLVTWNAMIAGHAKM- 352
F+ M + LVTWN +I G+ ++
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 353 -------MEQSRDNL-----YACW---------NGT--EALNLFSKLNCSGMKLDLFTFS 389
+ Q + W NG +AL++F K+ +G+ + T
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S +S C + QG ++H+ +K GF+ DV+VG SL++MY KC +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 51/306 (16%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+V WT ++ G + N A +F +M G P+ T+ A++AC+ LK + G ++H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
+ +K D VGN+L +YSKCG+LE A K F +K K+V +W + I+ +G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
K +F M N++PN T +++S
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISG--------------------------------- 462
Query: 316 YLYLKRGCIGEAQILFKGMDDASLV-----TWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
Y+K G GEA LF+ M+ V TWN +IAG+ + ++ EAL
Sbjct: 463 --YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKD-----------EAL 509
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
LF K+ S + T S+L C ++ +IH ++ + V +L + Y
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 569
Query: 431 IKCASV 436
K +
Sbjct: 570 AKSGDI 575
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 158/348 (45%), Gaps = 50/348 (14%)
Query: 50 SRYRGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXX 109
+R+R + L + D + +LQ C + +++H ++K G
Sbjct: 160 NRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVS 219
Query: 110 XXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
KCG ++ A + F M R+V+AW +++L Y QN + + A + EM G
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
P + T N L Y++ G+ + A+
Sbjct: 280 PGLVTW-----------------------------------NILIGGYNQLGKCDAAMDL 304
Query: 230 FKRIKE----KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCE 285
++++ +V +WTA IS +G + L +F +M + PN T+ S +S C
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 286 IQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAM 345
++ + G++VHS+ K+G+ ++ V NSL+ +Y K G + +A+ +F + + + TWN+M
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 346 IAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
I G+ + A + G +A LF+++ + ++ ++ T+++++S
Sbjct: 425 ITGYCQ----------AGYCG-KAYELFTRMQDANLRPNIITWNTMIS 461
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 51/320 (15%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
VH +K G +D KCG +EDAR+ FD + ++V W +++ GY Q
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A+ +F M P++ T N
Sbjct: 434 CGKAYELFTRMQDANLRPNIITW-----------------------------------NT 458
Query: 213 LCSLYSKCGRLEFALKAFKRIK-----EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSE 267
+ S Y K G A+ F+R++ ++N +W I+ +GK + L +F +M
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Query: 268 NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEA 327
PN T+ S+L C + ++ ++H + ++ V+N+L Y K G I +
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYS 578
Query: 328 QILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFT 387
+ +F GM+ ++TWN++I G+ L+ + AL LF+++ G+ + T
Sbjct: 579 RTIFLGMETKDIITWNSLIGGYV---------LHGSYG--PALALFNQMKTQGITPNRGT 627
Query: 388 FSSVLSVCGRMVAFVQGEQI 407
SS++ G M +G+++
Sbjct: 628 LSSIILAHGLMGNVDEGKKV 647
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 114/238 (47%), Gaps = 7/238 (2%)
Query: 118 KCGNMEDARRAFDHMPR-----RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSM 172
K G+ +A F M + RN W ++ GY+QN + A +F +M + P+
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNS 524
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
T+ L AC +L K ++H +++ ++D +V NAL Y+K G +E++ F
Sbjct: 525 VTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
++ K++I+W + I G L +F +M ++ + PN TL+S++ + ++ G
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Query: 293 TQV-HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+V +S+ L ++++YLY + + EA + M+ + W + + G
Sbjct: 645 KKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTG 702
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 2/215 (0%)
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIAL 179
+++ AR+ FD MP RN+V+W T++ GY QN +P+ +F EM T S P T+ L
Sbjct: 222 DIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
A + +L GE H ++ + +D V A+ +YSKCG +E A + F + EK V
Sbjct: 282 PAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVA 341
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
SW A I +G A+ L +FV M+ E +P+E T+ +V++ C +E G + +
Sbjct: 342 SWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM 400
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
++G + + ++ L + G + EA+ L M
Sbjct: 401 REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 170/401 (42%), Gaps = 34/401 (8%)
Query: 8 AVTATLKLHPQFKKYPPSSIPIDKGQNISLQKSHKFNTHLDPSRYRGFQEAL-------- 59
A+ +++ +F S++ I + + Q+ + ++ L S + + E
Sbjct: 5 AIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFAL 64
Query: 60 --SLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXX 117
L KE D+ + L + C +H I + G D
Sbjct: 65 YRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G M AR AFD MP R+ V+WT L+ GY++ A +FD+M H N +
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMD 184
Query: 178 ALNACTSLKSLKS--GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ S + E H +I + T++ + C++ ++ A K F + E
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTVITW-----TTMIHGYCNIKD----IDAARKLFDAMPE 235
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+N++SW I + + ++G+R+F EM + ++ P++ T+ SVL + L LG
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
H + + ++V ++L +Y K G I +A+ +F M + + +WNAMI G+A
Sbjct: 296 CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA---- 351
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
N AL+LF + K D T +V++ C
Sbjct: 352 -------LNGNARAALDLFVTMMIEE-KPDEITMLAVITAC 384
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 25/317 (7%)
Query: 125 ARRAFDHMPRRNVVAWTTLML-GYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNAC 182
AR+ FD P+R+ + M+ Y++ + +F ++ ++ + P T +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 183 TSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
+ + G QLH+ I ++ D V + +Y+K G++ A AF + ++ +SWT
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG--TQVHSMCT 300
A IS G+ ++F +M + V+ F++ G T +
Sbjct: 149 ALISGYIRCGELDLASKLFDQM--------PHVKDVVIYNAMMDGFVKSGDMTSARRLFD 200
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
++ +++ + ++++ Y I A+ LF M + +LV+WN MI G+ + +
Sbjct: 201 EMTHKTVI-TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ---- 255
Query: 361 YACWNGTEALNLFSKLNCS-GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
E + LF ++ + + D T SVL A GE H +
Sbjct: 256 -------EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 420 VIVGTSLINMYIKCASV 436
V V T++++MY KC +
Sbjct: 309 VKVCTAILDMYSKCGEI 325
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 7/302 (2%)
Query: 54 GFQEALSLAKEGTEEVDSSF--YIPLLQQCIDKRSFSDTQIVHGHIMKTGNH-EDXXXXX 110
G + L + KE E++ S+ + L+ C+ FS + +H ++K G D
Sbjct: 97 GLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQT 156
Query: 111 XXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP 170
+ + DAR+ FD +P+ +VV W LM GYV+ VF EML G P
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGNALCSLYSKCGRLEFALKA 229
++ AL AC + +L G+ +H ++ K I+ D VG AL +Y+KCG +E A++
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQF 288
FK++ +NV SW A I G AKK + + E+ ++P+ L VL+ C F
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 289 LELG-TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVT-WNAMI 346
LE G + + +M + + ++ L + G + +A L + M L + W A++
Sbjct: 337 LEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Query: 347 AG 348
G
Sbjct: 397 NG 398
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 169 YPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRL----E 224
+ S +L +A C ++K +KS H+ I + + +T + L + + L
Sbjct: 8 HQSWKSLILASQRCNTVKQIKST---HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFH 64
Query: 225 FALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEML---SENMQPNEYTLTSVLS 281
+A F I+ N + I C S + GLR F+ M+ E++ P+ T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 282 QCCEIQFLELGTQVHSMCTKLG-YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
C + F +G Q+H K G + S+ V+ +L +Y++ + +A+ +F + +V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA 400
W+ ++ G+ + C G+E L +F ++ G++ D F+ ++ L+ C ++ A
Sbjct: 185 KWDVLMNGYVR-----------CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGA 233
Query: 401 FVQGEQIHAQTIKTGFL-SDVIVGTSLINMYIKCASVVCA 439
QG+ IH K ++ SDV VGT+L++MY KC + A
Sbjct: 234 LAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETA 273
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 5/231 (2%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS---YPSMNTLAIALNA 181
A FD + N + T++ ++S+P F M+ PS T + A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
C G+Q+H +++K + D+ V + +Y + L A K F I + +V+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
W ++ G +GL +F EML + ++P+E+++T+ L+ C ++ L G +H
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 301 KLGY-ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
K + ES++ V +L+ +Y K GCI A +FK + ++ +W A+I G+A
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA 296
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 1/212 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KCG +E+AR FD MP RN+ W+ ++ GY +N+ + A +F+ M G + +
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+++C L +L+ GE+ + Y++K H+ + +G AL ++ +CG +E A+ F+ + E +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH- 296
+SW++ I G A K + F +M+S P + T T+VLS C +E G +++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
+M G E L ++ + + G + EA+
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAE 406
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 36/288 (12%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN---ALC---SLYSK-CGRLEFALKAFK 231
L +C+S LK +H ++++ H+ D V + ALC S ++K L +A F
Sbjct: 19 LQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+I+ N+ + I + K + +ML + P+ T ++ E++ + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G Q HS + G+++++ V NSL+++Y G I A +F M +V+W +M+AG+ K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 352 --MMEQSRD--------NLYACWNGTEALNLFSKLNCSGMKLDLFTF------------- 388
M+E +R+ NL+ W + +N ++K NC +DLF F
Sbjct: 196 CGMVENAREMFDEMPHRNLFT-W--SIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
SV+S C + A GE+ + +K+ ++I+GT+L++M+ +C +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 52/377 (13%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX------XXXKCGNMED-ARR 127
+ LLQ C SFSD +I+HG +++T D K N+ A
Sbjct: 16 LALLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
F + N+ + L+ + + P AF + +ML + +P T + A + ++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
+ GEQ H+ I+++ D V N+L +Y+ CG + A + F ++ ++V+SWT+ ++
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 248 ---CG-----------------------DSGKAK-----KGLRIFVEMLSENMQPNEYTL 276
CG +G AK K + +F M E + NE +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 277 TSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD 336
SV+S C + LE G + + K NL + +L+ ++ + G I +A +F+G+ +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 337 ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
++W+++I G L + +A++ FS++ G TF++VLS C
Sbjct: 313 TDSLSWSSIIKG-----------LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS 361
Query: 397 RMVAFVQGEQIHAQTIK 413
+G +I+ K
Sbjct: 362 HGGLVEKGLEIYENMKK 378
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 17/346 (4%)
Query: 90 TQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQ 149
T ++H +K G D K + AR+ FD M NVV+WT+++ GY
Sbjct: 48 TNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYND 107
Query: 150 NSRPKHAFHVFDEMLHTGSYPSMN-TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
+P++A +F +M P T A AC++L + G+ +HA + + +
Sbjct: 108 MGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIV 167
Query: 209 VGNALCSLYSKCGRLEFALKAFKRI--KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
V ++L +Y KC +E A + F + +NV+SWT+ I++ + + + + +F +
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA 227
Query: 267 E--NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
+ + N++ L SV+S C + L+ G H + T+ GYESN V SLL +Y K G +
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 325 GEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLD 384
A+ +F + S++++ +MI M +++ L G A+ LF ++ + +
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMI------MAKAKHGL-----GEAAVKLFDEMVAGRINPN 336
Query: 385 LFTFSSVLSVCGRMVAFVQG-EQIHAQTIKTGFLSDVIVGTSLINM 429
T VL C +G E + K G + D T +++M
Sbjct: 337 YVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDM 382
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 16/251 (6%)
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
LH +K DT N L Y K + A K F + E NV+SWT+ IS D GK
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 254 AKKGLRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRN 312
+ L +F +M + + PNEYT SV C + +G +H+ G N+ V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 313 SLLYLYLKRGCIGEAQILFKGMDD--ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
SL+ +Y K + A+ +F M ++V+W +MI +A + +R G EA+
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA---QNAR--------GHEAI 219
Query: 371 NLFSKLNC--SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
LF N + + + F +SV+S C + G+ H + G+ S+ +V TSL++
Sbjct: 220 ELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLD 279
Query: 429 MYIKCASVVCA 439
MY KC S+ CA
Sbjct: 280 MYAKCGSLSCA 290
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR--RNVVAWTTLMLGYVQN 150
+H + +G + KC ++E ARR FD M RNVV+WT+++ Y QN
Sbjct: 153 IHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQN 212
Query: 151 SRPKHA---FHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT 207
+R A F F+ L T + LA ++AC+SL L+ G+ H + + + +T
Sbjct: 213 ARGHEAIELFRSFNAAL-TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT 271
Query: 208 SVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSE 267
V +L +Y+KCG L A K F RI+ +VIS+T+ I + G + +++F EM++
Sbjct: 272 VVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG 331
Query: 268 NMQPNEYTLTSVLSQCCEIQFLELGTQVHS-MCTKLGYESNLRVRNSLLYLYLKRGCIGE 326
+ PN TL VL C + G + S M K G + R ++ + + G + E
Sbjct: 332 RINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDE 391
Query: 327 AQILFK----GMDDASLVTWNAMIAG 348
A L K G + +L+ W A+++
Sbjct: 392 AYELAKTIEVGAEQGALL-WGALLSA 416
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
AR+ FD +P+ + V++ TL+ GY A +F M G TL+ + AC
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD 152
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE-KNVISWTA 243
L +QLH + + D +SV NA + YSK G L A+ F + E ++ +SW +
Sbjct: 153 RVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I + G + K L ++ EM+ + + + +TL SVL+ + L G Q H K G
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 304 YESNLRVRNSLLYLYLK-RGCIG--EAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNL 360
+ N V + L+ Y K GC G +++ +F+ + LV WN MI+G++ E S
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE--- 327
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
EA+ F ++ G + D +F V S C + + Q +QIH IK+ S+
Sbjct: 328 -------EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 421 I-VGTSLINMYIKCASV 436
I V +LI++Y K ++
Sbjct: 381 ISVNNALISLYYKSGNL 397
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 131/281 (46%), Gaps = 45/281 (16%)
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV------- 238
+ L +G+ LHA +K + T + N +LYSKCGRL +A AF +E NV
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 239 ------------------------ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEY 274
+S+ IS D+ + + +F M + + +
Sbjct: 82 KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141
Query: 275 TLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
TL+ +++ CC+ ++L Q+H G++S V N+ + Y K G + EA +F GM
Sbjct: 142 TLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 335 DD-ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
D+ V+WN+MI + + E G +AL L+ ++ G K+D+FT +SVL+
Sbjct: 200 DELRDEVSWNSMIVAYGQHKE-----------GAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 394 VCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ + G Q H + IK GF + VG+ LI+ Y KC
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 150/305 (49%), Gaps = 18/305 (5%)
Query: 118 KCGNMEDARRAFDHMPR-RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLA 176
K G + +A F M R+ V+W ++++ Y Q+ A ++ EM+ G M TLA
Sbjct: 185 KGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLA 244
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEF---ALKAFKRI 233
LNA TSL L G Q H +IK ++ VG+ L YSKCG + + K F+ I
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304
Query: 234 KEKNVISWTAAISSCG-DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+++ W IS + +++ ++ F +M +P++ + V S C +
Sbjct: 305 LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQC 364
Query: 293 TQVHSMCTKLGYESN-LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
Q+H + K SN + V N+L+ LY K G + +A+ +F M + + V++N MI G+A+
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ 424
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
+GTEAL L+ ++ SG+ + TF +VLS C +G++ + T
Sbjct: 425 HG-----------HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-YFNT 472
Query: 412 IKTGF 416
+K F
Sbjct: 473 MKETF 477
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 13/278 (4%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG---NMEDARRAFDHMPR 134
L I R F HG ++K G H++ KCG M D+ + F +
Sbjct: 253 LDHLIGGRQF------HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 135 RNVVAWTTLMLGYVQNSR-PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
++V W T++ GY N + A F +M G P + +AC++L S +Q
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 194 LHAYIIKYHIDFD-TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG 252
+H IK HI + SV NAL SLY K G L+ A F R+ E N +S+ I G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 253 KAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESNLRVR 311
+ L ++ ML + PN+ T +VLS C ++ G + ++M E
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 312 NSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+ ++ L + G + EA+ M V W A++
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIA 178
G+ME R FD MP RNV +W L+ GY QN R F M+ GS P+ T+ +
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLV 194
Query: 179 LNACTSLKSLKSGEQLHAY--IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
L+AC L + G+ +H Y + Y+ D +V NAL +Y KCG +E A++ FK IK +
Sbjct: 195 LSACAKLGAFDFGKWVHKYGETLGYN-KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
++ISW I+ G + L +F EM + + P++ T VL C + +E G
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 124/276 (44%), Gaps = 52/276 (18%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
ARR FD P R++V W T++ GY++ A +FD+M C
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM-----------------PCRD 120
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
+ S N + Y+ G +E + F + E+NV SW
Sbjct: 121 VMSW----------------------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGL 158
Query: 245 ISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I +G+ + L F M+ E ++ PN+ T+T VLS C ++ + G VH LG
Sbjct: 159 IKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLG 218
Query: 304 YES-NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
Y ++ V+N+L+ +Y K G I A +FKG+ L++WN MI G L A
Sbjct: 219 YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING-----------LAA 267
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRM 398
+GTEALNLF ++ SG+ D TF VL C M
Sbjct: 268 HGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 24/161 (14%)
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM--ME----- 354
L E ++ + N+++ Y++ G + EA+ LF M +++WN ++ G+A + ME
Sbjct: 84 LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERV 143
Query: 355 ---QSRDNLYACWNG-----------TEALNLFSKLNCSGMKL-DLFTFSSVLSVCGRMV 399
N+++ WNG +E L F ++ G + + T + VLS C ++
Sbjct: 144 FDDMPERNVFS-WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 400 AFVQGEQIHAQTIKTGFLS-DVIVGTSLINMYIKCASVVCA 439
AF G+ +H G+ DV V +LI+MY KC ++ A
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 87/225 (38%), Gaps = 10/225 (4%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXXXXXXXXKC 119
+ EG+ + + +L C +F + VH + G N D KC
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKC 237
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G +E A F + RR++++W T++ G + A ++F EM ++G P T L
Sbjct: 238 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC----SLYSKCGRLEFALKAFKRIKE 235
AC + ++ G AY DF C L S+ G L A++ ++
Sbjct: 298 CACKHMGLVEDG---LAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPV 354
Query: 236 K-NVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLTS 278
K + + W + + K G E++ E P + + S
Sbjct: 355 KADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 172/387 (44%), Gaps = 54/387 (13%)
Query: 51 RYRGFQEALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXX 107
R + FQE++S+ K + D Y +++ C F+ ++VHG I + + +
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 108 XXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG 167
+ G ++ ARR FD M R+ V+W ++ Y + AF + D M +G
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 168 ---SYPSMNTLA--------------------------------IALNACTSLKSLKSGE 192
S + NT+A L AC+ + +LK G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 193 QLHAYIIK---YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
H +I+ + D D +V N+L ++YS+C L A F++++ ++ +W + IS
Sbjct: 341 VFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS-MCTKLGYESNL 308
+ ++++ + EML PN TL S+L + L+ G + H + + Y+ L
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
+ NSL+ +Y K G I A+ +F M VT+ ++I G+ ++ + G
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGK-----------GEV 508
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVC 395
AL F ++ SG+K D T +VLS C
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 166/401 (41%), Gaps = 49/401 (12%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL C+ F Q +H H + +G D +++A+ ++ +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
+ W L+ Y++N R + + V+ M+ G T + AC +L G +H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS---------- 246
I + V NAL S+Y + G+++ A + F R+ E++ +SW A I+
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 247 -------------------------SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
C ++G L V M + N++ + + L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 282 QCCEIQFLELGTQVHSMCTK-LGYESNL-RVRNSLLYLYLKRGCIGEAQILFKGMDDASL 339
C I L+ G H + + + ++ VRNSL+ +Y + + A I+F+ ++ SL
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 340 VTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMV 399
TWN++I+G A E+S + + L ++ SG + T +S+L + R+
Sbjct: 389 STWNSIISGFA-YNERSEETSF----------LLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 400 AFVQGEQIHAQTIKTGFLSD-VIVGTSLINMYIKCASVVCA 439
G++ H ++ D +I+ SL++MY K ++ A
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+C ++ A F + ++ W +++ G+ N R + + EML +G +P+ TLA
Sbjct: 369 RCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLAS 428
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV-GNALCSLYSKCGRLEFALKAFKRIKEK 236
L + +L+ G++ H YI++ D + N+L +Y+K G + A + F ++++
Sbjct: 429 ILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+ +++T+ I G GK + L F +M ++P+ T+ +VLS C + G H
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG---H 545
Query: 297 SMCTKLGYESNLRVR----NSLLYLYLKRGCIGEAQILF 331
+ TK+ + +R+R + ++ LY + G + +A+ +F
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 15/195 (7%)
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTL---TSVLSQCCEIQFLELGTQVHSMCTKLGY 304
C G+ + R F +L +E+ L S+LS C G Q+H+ C G
Sbjct: 56 CISHGQLYEAFRTF-SLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
E + + L+ Y + EAQ + + + + WN +I + R+ +
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYI------RNKRF--- 165
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
E+++++ ++ G++ D FT+ SV+ C ++ F G +H + ++ V
Sbjct: 166 --QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 425 SLINMYIKCASVVCA 439
+LI+MY + V A
Sbjct: 224 ALISMYKRFGKVDVA 238
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 172/387 (44%), Gaps = 54/387 (13%)
Query: 51 RYRGFQEALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXX 107
R + FQE++S+ K + D Y +++ C F+ ++VHG I + + +
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 108 XXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG 167
+ G ++ ARR FD M R+ V+W ++ Y + AF + D M +G
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 168 ---SYPSMNTLA--------------------------------IALNACTSLKSLKSGE 192
S + NT+A L AC+ + +LK G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 193 QLHAYIIK---YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
H +I+ + D D +V N+L ++YS+C L A F++++ ++ +W + IS
Sbjct: 341 VFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS-MCTKLGYESNL 308
+ ++++ + EML PN TL S+L + L+ G + H + + Y+ L
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
+ NSL+ +Y K G I A+ +F M VT+ ++I G+ ++ + G
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGK-----------GEV 508
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVC 395
AL F ++ SG+K D T +VLS C
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 166/401 (41%), Gaps = 49/401 (12%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
LL C+ F Q +H H + +G D +++A+ ++ +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHA 196
+ W L+ Y++N R + + V+ M+ G T + AC +L G +H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS---------- 246
I + V NAL S+Y + G+++ A + F R+ E++ +SW A I+
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 247 -------------------------SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
C ++G L V M + N++ + + L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 282 QCCEIQFLELGTQVHSMCTK-LGYESNL-RVRNSLLYLYLKRGCIGEAQILFKGMDDASL 339
C I L+ G H + + + ++ VRNSL+ +Y + + A I+F+ ++ SL
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 340 VTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMV 399
TWN++I+G A E+S + + L ++ SG + T +S+L + R+
Sbjct: 389 STWNSIISGFA-YNERSEETSF----------LLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 400 AFVQGEQIHAQTIKTGFLSD-VIVGTSLINMYIKCASVVCA 439
G++ H ++ D +I+ SL++MY K ++ A
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+C ++ A F + ++ W +++ G+ N R + + EML +G +P+ TLA
Sbjct: 369 RCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLAS 428
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV-GNALCSLYSKCGRLEFALKAFKRIKEK 236
L + +L+ G++ H YI++ D + N+L +Y+K G + A + F ++++
Sbjct: 429 ILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+ +++T+ I G GK + L F +M ++P+ T+ +VLS C + G H
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG---H 545
Query: 297 SMCTKLGYESNLRVR----NSLLYLYLKRGCIGEAQILF 331
+ TK+ + +R+R + ++ LY + G + +A+ +F
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 15/195 (7%)
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTL---TSVLSQCCEIQFLELGTQVHSMCTKLGY 304
C G+ + R F +L +E+ L S+LS C G Q+H+ C G
Sbjct: 56 CISHGQLYEAFRTF-SLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
E + + L+ Y + EAQ + + + + WN +I + R+ +
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYI------RNKRF--- 165
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
E+++++ ++ G++ D FT+ SV+ C ++ F G +H + ++ V
Sbjct: 166 --QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 425 SLINMYIKCASVVCA 439
+LI+MY + V A
Sbjct: 224 ALISMYKRFGKVDVA 238
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 4/234 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS-YPSMNTLA 176
K GN+E AR FD M R++V+W ++ GY Q+ P A +F ++L G P T+
Sbjct: 204 KQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVV 263
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
AL+AC+ + +L++G +H ++ I + V L +YSKCG LE A+ F K
Sbjct: 264 AALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
++++W A I+ G ++ LR+F EM +QP + T L C + G ++
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 296 -HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
SM + G + + L+ L + G + A K M+ DA V W++++
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 48/291 (16%)
Query: 150 NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSV 209
N AF ++ ++L + P+ T + L +C++ KSG+ +H +++K+ + D V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYV 163
Query: 210 GNALCSLYSKCGRLEFALKAFKRIKEK-------------------------------NV 238
L +Y+K G + A K F R+ E+ ++
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENM-QPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+SW I G L +F ++L+E +P+E T+ + LS C +I LE G +H
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
N++V L+ +Y K G + EA ++F +V WNAMIAG+A M S+
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA-MHGYSQ 342
Query: 358 DNLYACWNGTEALNLFSKLN-CSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
D AL LF+++ +G++ TF L C +G +I
Sbjct: 343 D----------ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 31/291 (10%)
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS---VGNALCSLYSKCGRLEFA 226
P LA+ ++ S+ + Q+HA I+++++ + L Y+ G++ +
Sbjct: 27 PPPEKLAVLIDKSQSVDEVL---QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHS 83
Query: 227 LKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI 286
L F + + ++ +TAAI++ +G + ++V++LS + PNE+T +S+L C
Sbjct: 84 LALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST- 142
Query: 287 QFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMI 346
+ G +H+ K G + V L+ +Y K G + AQ +F M + SLV+ AMI
Sbjct: 143 ---KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMI 199
Query: 347 AGHAKM--MEQSR---DNL----YACWN-----------GTEALNLFSKLNCSGM-KLDL 385
+AK +E +R D++ WN +AL LF KL G K D
Sbjct: 200 TCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 386 FTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
T + LS C ++ A G IH + +V V T LI+MY KC S+
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSL 310
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 15/271 (5%)
Query: 127 RAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLK 186
R D P W +M Y+++ P A V+ M+ + P +L I + A +
Sbjct: 74 RILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
G++LH+ ++ D + +LY K G E A K F E+ + SW A I
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS--MCTKLGY 304
+G+A + + +FV+M ++P+++T+ SV + C + L L Q+H + K
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE 251
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
+S++ + NSL+ +Y K G + A +F+ M ++V+W++MI G+A A
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYA-----------ANG 300
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
N EAL F ++ G++ + TF VLS C
Sbjct: 301 NTLEALECFRQMREFGVRPNKITFVGVLSAC 331
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 4/238 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G E+AR+ FD P R + +W ++ G R A +F +M +G P T+
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVS 223
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHID--FDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+C L L QLH +++ + D + N+L +Y KCGR++ A F+ +++
Sbjct: 224 VTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ 283
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG-TQ 294
+NV+SW++ I +G + L F +M ++PN+ T VLS C +E G T
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAGHAK 351
M ++ E L ++ L + G + EA+ + + M +++ W ++ G K
Sbjct: 344 FAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 257 GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
+++++ M+ + P+ Y+L V+ +I LG ++HS+ +LG+ + + +
Sbjct: 101 AIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFIT 160
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL 376
LY K G A+ +F + L +WNA+I G + R N EA+ +F +
Sbjct: 161 LYCKAGEFENARKVFDENPERKLGSWNAIIGG---LNHAGRAN--------EAVEMFVDM 209
Query: 377 NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI--KTGFLSDVIVGTSLINMYIKCA 434
SG++ D FT SV + CG + Q+H + KT SD+++ SLI+MY KC
Sbjct: 210 KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCG 269
Query: 435 SVVCAS 440
+ AS
Sbjct: 270 RMDLAS 275
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 153/352 (43%), Gaps = 49/352 (13%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
I +L+ C ++ + +H I++T + +D +++ A F ++
Sbjct: 33 ISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSN 89
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
NV +T ++ G+V + R ++ M+H P + L AC LK ++
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 195 HAYIIKYHIDFDTSVG-------------------------------NALCSLYSKCGRL 223
HA ++K SVG + + YS+CG +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 224 EFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
+ AL+ F+ +K K+ + WTA I + + K L +F EM EN+ NE+T VLS C
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 284 CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWN 343
++ LELG VHS E + V N+L+ +Y + G I EA+ +F+ M D ++++N
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 344 AMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
MI+G L EA+N F + G + + T ++L+ C
Sbjct: 326 TMISG-----------LAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 98/178 (55%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+CG +++A F + ++ V WT ++ G V+N A +F EM + T
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC+ L +L+ G +H+++ ++ VGNAL ++YS+CG + A + F+ +++K+
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
VIS+ IS G + + + F +M++ +PN+ TL ++L+ C L++G +V
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 29/292 (9%)
Query: 170 PSMNTLAIA-----LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLE 224
P NTL ++ ++ S K++ +HA II+ D D V L + S ++
Sbjct: 19 PDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD 78
Query: 225 FALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCC 284
+A F + NV +TA I SG++ G+ ++ M+ ++ P+ Y +TSVL C
Sbjct: 79 YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD 138
Query: 285 EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNA 344
L++ ++H+ KLG+ S+ V ++ +Y K G + A+ +F M D V
Sbjct: 139 ----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 345 MIAGHAK---------MMEQSRDNLYACWNG-----------TEALNLFSKLNCSGMKLD 384
MI +++ + + + CW +AL LF ++ + +
Sbjct: 195 MINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN 254
Query: 385 LFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
FT VLS C + A G +H+ VG +LINMY +C +
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 116/219 (52%), Gaps = 3/219 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G +++A + FD MP R++++WT ++ G+V+ + A F EM +G P +
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
ALNACT+L +L G +H Y++ + V N+L LY +CG +EFA + F ++++
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V+SW + I +G A + L F +M + +P+ T T L+ C + +E G +
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 298 MCTKLGYESNLRVRN--SLLYLYLKRGCIGEAQILFKGM 334
+ K Y + R+ + L+ LY + G + +A L + M
Sbjct: 332 I-MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 45/292 (15%)
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS--GEQLH 195
V+WT+ + +N R A F +M G P+ T L+ C S G+ LH
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 196 AYIIKYHIDFD-TSVGNALCSLYSKCGR-------------------------------L 223
Y K +D + VG A+ +YSK GR +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 224 EFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
+ A K F ++ E+++ISWTA I+ G ++ L F EM ++P+ + + L+ C
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 284 CEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWN 343
+ L G VH +++N+RV NSL+ LY + GC+ A+ +F M+ ++V+WN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 344 AMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
++I G A A N E+L F K+ G K D TF+ L+ C
Sbjct: 277 SVIVGFA-----------ANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF--LELGT 293
+ +SWT+ I+ +G+ + + F +M ++PN T ++LS C + LG
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 294 QVHSMCTKLGYESN-LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH--- 349
+H KLG + N + V +++ +Y KRG +A+++F M+D + VTWN MI G+
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 350 ------AKMMEQSRDNLYACW----NG-------TEALNLFSKLNCSGMKLDLFTFSSVL 392
AKM ++ + W NG EAL F ++ SG+K D + L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ C + A G +H + F ++V V SLI++Y +C V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCV 257
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPR 134
I L C + + S VH +++ + +CG +E AR+ F +M +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
R VV+W ++++G+ N + F +M G P T AL AC+ + ++ G +
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR- 328
Query: 195 HAYIIK--YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAISSCGDS 251
+ I+K Y I L LYS+ GRLE ALK + + K N + + +++C +
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 252 G 252
G
Sbjct: 389 G 389
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 163/376 (43%), Gaps = 47/376 (12%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG 120
+A G EV++ ++IP LQ+ +S ++ + ++ I+ G + K
Sbjct: 1 MAFHGIREVEN-YFIPFLQRV---KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE 56
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIAL 179
+M+ A R F+ + NV + +++ Y NS ++ ++L P T
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+C SL S G+Q+H ++ K+ F NAL +Y K L A K F + E++VI
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 240 SW-------------------------------TAAISSCGDSGKAKKGLRIFVEMLSEN 268
SW TA IS G + + F EM
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
++P+E +L SVL C ++ LELG +H + G+ V N+L+ +Y K G I +A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 329 ILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTF 388
LF M+ +++W+ MI+G+A N A+ F+++ + +K + TF
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHG-----------NAHGAIETFNEMQRAKVKPNGITF 345
Query: 389 SSVLSVCGRMVAFVQG 404
+LS C + + +G
Sbjct: 346 LGLLSACSHVGMWQEG 361
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 68 EVDSSFYIPLL-QQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDAR 126
E+ F P + + C S + VHGH+ K G K ++ DA
Sbjct: 105 ELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAH 164
Query: 127 RAFDHMPRRNVVAWTTLMLGYV---QNSRPKHAFHV------------------------ 159
+ FD M R+V++W +L+ GY Q + K FH+
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 160 ----FDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCS 215
F EM G P +L L +C L SL+ G+ +H Y + T V NAL
Sbjct: 225 AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIE 284
Query: 216 LYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYT 275
+YSKCG + A++ F +++ K+VISW+ IS G A + F EM ++PN T
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 276 LTSVLSQCCEIQFLELGTQVHSM 298
+LS C + + G + M
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDM 367
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 127/273 (46%), Gaps = 21/273 (7%)
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
+KS ++++A II + + + + + K +++A + F ++ NV + +
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSI 79
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQ-PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I + + +RI+ ++L ++ + P+ +T + C + LG QVH K G
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR------ 357
++ N+L+ +Y+K + +A +F M + +++WN++++G+A++ + +
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 358 ---DNLYACWNG-----------TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ 403
D W EA++ F ++ +G++ D + SVL C ++ +
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 404 GEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
G+ IH + GFL V +LI MY KC +
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 181/431 (41%), Gaps = 121/431 (28%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM--LHTGSYPSMNTLAI 177
GN+++A F M R++V+W ++ Y +N + A+ VFDEM T SY +M T A+
Sbjct: 64 GNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMIT-AM 122
Query: 178 ALNAC-----------------TSLKSLKSG----------EQLHAYI-IKYHIDFDTSV 209
N C S ++ +G E L+A +K+ D+
Sbjct: 123 IKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFR---DSVA 179
Query: 210 GNALCSLYSKCGRLEFALKAFK-------------------------------RIKEKNV 238
N L S Y + G+ A++ F+ R+ E+NV
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV 239
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
I+WTA I +G + G +F+ M E +++ N TL + C + G+Q+H
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG 299
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG--------- 348
+ +++ E +L + NSL+ +Y K G +GEA+ +F M + V+WN++I G
Sbjct: 300 LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 349 ----HAKM-----------------------------MEQSRDNLYACW---------NG 366
KM M +DN+ W NG
Sbjct: 360 AYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNI--TWTAMISAFVSNG 417
Query: 367 --TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
EAL F K+ + + +TFSSVLS + ++G QIH + +K ++D+ V
Sbjct: 418 YYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQN 477
Query: 425 SLINMYIKCAS 435
SL++MY KC +
Sbjct: 478 SLVSMYCKCGN 488
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 50/342 (14%)
Query: 54 GFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXX 113
GF L + +EG +V+S+ + + C D + + +HG + + D
Sbjct: 258 GFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 114 XXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G M +A+ F M ++ V+W +L+ G VQ + A+ +F++M
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM---------- 367
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
G+ + ++ + +S G + ++ F +
Sbjct: 368 ----------------PGKDMVSW-------------TDMIKGFSGKGEISKCVELFGMM 398
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT 293
EK+ I+WTA IS+ +G ++ L F +ML + + PN YT +SVLS + L G
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 294 QVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMM 353
Q+H K+ ++L V+NSL+ +Y K G +A +F + + ++V++N MI+G++
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYS--- 515
Query: 354 EQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
Y + G +AL LFS L SG + + TF ++LS C
Sbjct: 516 -------YNGF-GKKALKLFSMLESSGKEPNGVTFLALLSAC 549
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G + F MP ++ + WT ++ +V N + A F +ML P+ T + L
Sbjct: 386 GEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVL 445
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
+A SL L G Q+H ++K +I D SV N+L S+Y KCG A K F I E N++
Sbjct: 446 SATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
S+ IS +G KK L++F + S +PN T ++LS C + +++LG
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 8/236 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G+ + AR FD M +R+VV+W T++ GY N K A VF EM P+ TL
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L A + L SL+ GE LH Y I D +G+AL +YSKCG +E A+ F+R+ +N
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
VI+W+A I+ G+A + F +M ++P++ ++L+ C +E G + S
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 298 -MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM----DDASLVTWNAMIAG 348
M + G E + ++ L + G + EA+ M DD V W A++
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD---VIWKALLGA 452
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 44/299 (14%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL---CSLYSKCGR-LEFALKAFKRIK 234
+N C +++ L Q+HA IK DT + C+ R L++A K F ++
Sbjct: 30 INNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 235 EKNVISWTAAIS--SCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLEL 291
++N SW I S D KA + +F EM+S E ++PN +T SVL C + ++
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF--------------KGMDDA 337
G Q+H + K G+ + V ++L+ +Y+ G + +A++LF + D
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 338 SLVTWNAMIAGHAK---------MMEQSRDNLYACWNG-----------TEALNLFSKLN 377
+V WN MI G+ + + ++ R WN +A+ +F ++
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 378 CSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
++ + T SVL R+ + GE +H +G D ++G++LI+MY KC +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 164/398 (41%), Gaps = 66/398 (16%)
Query: 76 PLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCG----NMEDARRAFDH 131
P + C R+ D +H +K+G D +++ A + F+
Sbjct: 28 PQINNC---RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKH--AFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSL 188
MP+RN +W T++ G+ ++ K A +F EM+ P+ T L AC +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG-----RLEF------------------ 225
+ G+Q+H +KY D V + L +Y CG R+ F
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 226 ----------------------ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVE 263
A F ++++++V+SW IS +G K + +F E
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
M +++PN TL SVL + LELG +H G + + ++L+ +Y K G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKL 383
I +A +F+ + +++TW+AMI G A + Q+ D A++ F K+ +G++
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFA-IHGQAGD----------AIDCFCKMRQAGVRP 373
Query: 384 DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
+ ++L+ C +G + +Q + L I
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRI 411
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 163/379 (43%), Gaps = 74/379 (19%)
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT 183
DA + FD MP R+ V++TTL+ GY QN++ A +F EM + G + TLA ++AC+
Sbjct: 125 DALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACS 184
Query: 184 SLKSLKSGEQLHAYIIKYHID-------------------------FDT------SVGNA 212
L + L + IK ++ FD N
Sbjct: 185 HLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNV 244
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+ + YSK G +E A + F +I EK+++SW I C + + L + EML M+P+
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE--------------------------- 305
E + +LS G Q+H K G++
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 306 ----SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
++ RN+L+ ++K G + +A+ +F D + +WNAMI+G+A+ +
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL---- 420
Query: 362 ACWNGTEALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
AL+LF ++ + S +K D T SV S + + +G++ H + +
Sbjct: 421 -------ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND 473
Query: 421 IVGTSLINMYIKCASVVCA 439
+ ++I+MY KC S+ A
Sbjct: 474 NLTAAIIDMYAKCGSIETA 492
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 6/237 (2%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLA 176
K G +E AR FD +++ +W ++ GY Q+ P+ A H+F EM+ + P T+
Sbjct: 383 KNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMV 442
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF---KRI 233
+A +SL SL+ G++ H Y+ I + ++ A+ +Y+KCG +E AL F K I
Sbjct: 443 SVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNI 502
Query: 234 KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG- 292
+ W A I G AK L ++ ++ S ++PN T VLS CC +ELG
Sbjct: 503 SSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGK 562
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
T SM + G E +++ ++ L K G + EA+ + K M A ++ W +++
Sbjct: 563 TYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 619
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 137/318 (43%), Gaps = 56/318 (17%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G +E A FD + +++V+W T++ G ++ ++ A + EML G PS +
Sbjct: 251 KAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVD 310
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHID-------------------------FDTSVG-- 210
L+A G QLH I+K D F+ SV
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 211 ----NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
NAL + + K G +E A + F + +K++ SW A IS S + L +F EM+S
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 267 EN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG 325
+ ++P+ T+ SV S + LE G + H N + +++ +Y K G I
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIE 490
Query: 326 EAQILF---KGMDDASLVTWNAMIA-----GHAKMMEQSRDNLYACWNGTEALNLFSKLN 377
A +F K + +++ WNA+I GHAK+ AL+L+S L
Sbjct: 491 TALNIFHQTKNISSSTISPWNAIICGSATHGHAKL----------------ALDLYSDLQ 534
Query: 378 CSGMKLDLFTFSSVLSVC 395
+K + TF VLS C
Sbjct: 535 SLPIKPNSITFVGVLSAC 552
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 53/309 (17%)
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG------------ 221
L AL +C S + G Q+H ++K +D + + N++ ++Y+KC
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 222 -------------------RLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFV 262
RL ALK F + E++ +S+T I + + + + +F
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 263 EMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRG 322
EM + + NE TL +V+S C + + + S+ KL E + V +LL++Y
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 323 CIGEAQILFKGMDDASLVTWNAMIAGHAK---------MMEQSRDNLYACWNGT------ 367
C+ +A+ LF M + +LVTWN M+ G++K + +Q + W GT
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW-GTMIDGCL 281
Query: 368 ------EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
EAL ++++ GMK +LS R V +G Q+H +K GF
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 341
Query: 422 VGTSLINMY 430
+ ++I+ Y
Sbjct: 342 LQATIIHFY 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
E L S L C + G Q+H K G +SN + NS+L +Y K + +A+ +F+
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 333 GMDDASLVTWNAMIAGHAK-------------MMEQSRDNLYACWNG-------TEALNL 372
++N M+ G+ + M E+S + G +EA+ L
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 373 FSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
F ++ G+ L+ T ++V+S C + + + IK V V T+L++MY
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 433 C 433
C
Sbjct: 221 C 221
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 152/331 (45%), Gaps = 16/331 (4%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
+D +I L+ C + S + +HG +++G CG + DAR+
Sbjct: 123 LDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKV 182
Query: 129 FDHMPRR-NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
FD MP+ + V ++TLM GY+Q S+ A +F M + +++TL L+A + L
Sbjct: 183 FDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGD 242
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISS 247
L E H IK +D D + AL +Y K G + A + F K+V++W I
Sbjct: 243 LSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQ 302
Query: 248 CGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
+G ++ + + +M E M+PN T +LS C + +G V + + +
Sbjct: 303 YAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALD 362
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
+ +L+ +Y K G + +A +F M D + +W AMI+G+ A
Sbjct: 363 AILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYG-----------AHGLAR 411
Query: 368 EALNLFSKL---NCSGMKLDLFTFSSVLSVC 395
EA+ LF+K+ NC ++ + TF VL+ C
Sbjct: 412 EAVTLFNKMEEENCK-VRPNEITFLVVLNAC 441
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 161/368 (43%), Gaps = 21/368 (5%)
Query: 72 SFYIPLLQQCI-DKRSFSDT---QIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARR 127
S P Q+ I D RS DT +HG+++KTG +D ++ A
Sbjct: 22 SLLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL-DIRYASS 80
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
F+H+ N+ + T++ GY + P+ AF VF+++ G + L +C+
Sbjct: 81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELC 140
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-NVISWTAAIS 246
+ GE LH ++ T + NAL Y CG++ A K F + + + ++++ ++
Sbjct: 141 VSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMN 200
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
K L +F M + N TL S LS ++ L H +C K+G +
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK--MMEQSRDNLYACW 364
+L + +L+ +Y K G I A+ +F +VTWN MI +AK ++E+ W
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE------CVW 314
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
L ++ MK + TF +LS C A G + + D I+GT
Sbjct: 315 -------LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGT 367
Query: 425 SLINMYIK 432
+L++MY K
Sbjct: 368 ALVDMYAK 375
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 327 AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
A +F+ + + +L +N MI G++ E R A ++F++L G+ LD F
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPER-----------AFSVFNQLRAKGLTLDRF 126
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+F + L C R + GE +H +++GF+ + +LI+ Y C +
Sbjct: 127 SFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKI 176
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 52/280 (18%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G++ AR FD M R+ ++W T++ GYV SR + AF +F EM P+ +
Sbjct: 293 KVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNRDA--- 343
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
H++ N + S Y+ G +E A F++ EK+
Sbjct: 344 -----------------HSW-------------NMMVSGYASVGNVELARHYFEKTPEKH 373
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+SW + I++ + K+ + +F+ M E +P+ +TLTS+LS + L LG Q+H
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAGHAKMMEQS 356
+ K ++ V N+L+ +Y + G I E++ +F M ++TWNAMI G+A
Sbjct: 434 IVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG--- 489
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
N +EALNLF + +G+ TF SVL+ C
Sbjct: 490 --------NASEALNLFGSMKSNGIYPSHITFVSVLNACA 521
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 167/415 (40%), Gaps = 101/415 (24%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G + +AR F+ + RN V W T++ GYV+ A +FD M + NT+
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR-DVVTWNTMIS 110
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+C ++ L+ +L + D+ N + S Y+K R+ AL F+++ E+N
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP----------NE-------------- 273
+SW+A I+ +G+ + +F +M ++ P NE
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 274 ---------YTLTSVL-----------SQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
Y +++ ++C Q +L H + + N+ NS
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 314 LLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG--HAKMMEQS---------RD---- 358
++ YLK G + A++LF M D ++WN MI G H ME + RD
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSW 346
Query: 359 NL----YAC---------------------WNGT-----------EALNLFSKLNCSGMK 382
N+ YA WN EA++LF ++N G K
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 383 LDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVV 437
D T +S+LS +V G Q+H +KT + DV V +LI MY +C ++
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIM 460
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 118 KCGNMEDARRAFDHMP-RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLA 176
+CG + ++RR FD M +R V+ W ++ GY + A ++F M G YPS T
Sbjct: 455 RCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFV 514
Query: 177 IALNACTSLKSLKSGE-QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK- 234
LNAC + + Q + + Y I+ ++L ++ S G+ E A+ +
Sbjct: 515 SVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPF 574
Query: 235 EKNVISWTAAISSC 248
E + W A + +C
Sbjct: 575 EPDKTVWGALLDAC 588
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 140/326 (42%), Gaps = 39/326 (11%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM- 132
+ LL C+ R + HG ++ G + KCG ME A+R FD M
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 133 ------------------------------PRRNVVAWTTLMLGYVQNSRPKHAFHVFDE 162
P +N V+WT L+ GYV+ A +F +
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 163 MLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGR 222
M+ G P T + L A S+ SL+ G+++H Y+I+ ++ + V ++L +YSK G
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 223 LEFALKAFKRIKEK-NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
LE + + F+ +K + + W IS+ G K LR+ +M+ +QPN TL +L+
Sbjct: 362 LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 282 QCCEIQFLELGTQ-VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASL 339
C +E G + SM + G + L+ L + GC E + M +
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 340 VTWNAM-----IAGHAKMMEQSRDNL 360
WNA+ I G+ ++ +++ D L
Sbjct: 482 HIWNAILGVCRIHGNEELGKKAADEL 507
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 135/339 (39%), Gaps = 64/339 (18%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXXXXXXXXKCGNMEDA---------- 125
LLQQC D +S + +H H+ TG + KCG DA
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 126 ---------------------RRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML 164
R FD MP R+VV+W T+++GY Q+ A + E
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 165 HTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII------------------------- 199
+G + + A L AC + L+ Q H ++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 200 --KYHIDF----DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
K D D + L S Y+K G +E A K F + EKN +SWTA I+ G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
+ L +F +M++ ++P ++T +S L I L G ++H + N V +S
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 314 LLYLYLKRGCIGEAQILFKGMDDA-SLVTWNAMIAGHAK 351
L+ +Y K G + ++ +F+ DD V WN MI+ A+
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQ 390
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 150/357 (42%), Gaps = 53/357 (14%)
Query: 133 PR-RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
PR R + + + + + A + + G + LA L C KSLK G
Sbjct: 6 PRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQG 65
Query: 192 EQLHAYI-IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI----------------- 233
+ +H ++ I +T + N L +Y KCG+ A K F ++
Sbjct: 66 KWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 234 --------------KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSV 279
E++V+SW + G + L + E ++ NE++ +
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGL 185
Query: 280 LSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL 339
L+ C + + L+L Q H G+ SN+ + S++ Y K G + A+ F M +
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 340 VTWNAMIAGHAKMME-QSRDNLY--------ACW-----------NGTEALNLFSKLNCS 379
W +I+G+AK+ + ++ + L+ W +G AL+LF K+
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 380 GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
G+K + FTFSS L + + G++IH I+T + IV +SLI+MY K S+
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 276 LTSVLSQCCEIQFLELGTQVHSMCTKLGYE-SNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
L S+L QC + + L+ G +H G++ N + N L+ +Y+K G +A +F M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 335 DDASLVTWNAMIAGHAK--MMEQSR-------DNLYACWNGT-----------EALNLFS 374
+L +WN M++G+ K M+ ++R + WN EAL +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 375 KLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ SG+K + F+F+ +L+ C + Q H Q + GFLS+V++ S+I+ Y KC
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 435 SVVCA 439
+ A
Sbjct: 229 QMESA 233
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 13/321 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K GN+ A AFD M R+VV + L+ G + A ++ EM+ G S +T
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+ C+ + G Q+H +I + V +AL LY+ ++ ALK F + ++N
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+ + +G++K+ +++ M E + N T ++ C + + G Q+HS
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 298 MCTKLGYE-SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
+ K G+ SN+ V N L+ Y G + + F + + +++WN++++ A
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADY---- 293
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
+ ++L+LFSK+ G + + F S L+ C R G+QIH +K GF
Sbjct: 294 -------GSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 417 -LSDVIVGTSLINMYIKCASV 436
+S + V ++LI+MY KC +
Sbjct: 347 DVSSLHVQSALIDMYGKCNGI 367
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 23/316 (7%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
A + FD M RN+ L+ + Q K F V+ M G + T + C+
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 185 LKSLKSGEQLHAYIIKYHIDF-DTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
+ + G+QLH+ ++K + + V N L YS CG L ++++F + EK+VISW +
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
+S C D G L +F +M +P+ S L+ C ++ G Q+H K+G
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMG 345
Query: 304 YE-SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
++ S+L V+++L+ +Y K I + +L++ + +L N+++ +L
Sbjct: 346 FDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMT-----------SLMH 394
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT------IKTGF 416
C + + +F + G +D T S+VL + ++ E +H+ T IK+G+
Sbjct: 395 CGITKDIIEMFGLMIDEGTGIDEVTLSTVL----KALSLSLPESLHSCTLVHCCAIKSGY 450
Query: 417 LSDVIVGTSLINMYIK 432
+DV V SLI+ Y K
Sbjct: 451 AADVAVSCSLIDAYTK 466
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 164/359 (45%), Gaps = 16/359 (4%)
Query: 53 RGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXX 111
R F+ L + EG + + Y +++ C R + + +H ++K+G N +
Sbjct: 196 RLFEVYLRMELEGVAK-NGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANV 254
Query: 112 XXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS 171
CG++ + R+F+ +P ++V++W +++ + +F +M G PS
Sbjct: 255 LVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPS 314
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT-SVGNALCSLYSKCGRLEFALKAF 230
+ LN C+ ++SG+Q+H Y++K D + V +AL +Y KC +E + +
Sbjct: 315 IRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLY 374
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS--QCCEIQF 288
+ + N+ + ++S G K + +F M+ E +E TL++VL +
Sbjct: 375 QSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPES 434
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
L T VH K GY +++ V SL+ Y K G ++ +F +D ++ ++I G
Sbjct: 435 LHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIING 494
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+A R+ + GT+ + + +++ + D T SVLS C +GE I
Sbjct: 495 YA------RNGM-----GTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELI 542
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 5/278 (1%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXXXXXXXXKCGNMEDARRAFDHM 132
++ L C + +H +++K G + KC +E++ + +
Sbjct: 318 FMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSL 377
Query: 133 PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACT-SL-KSLKS 190
P N+ +LM + K +F M+ G+ TL+ L A + SL +SL S
Sbjct: 378 PCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHS 437
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
+H IK D +V +L Y+K G+ E + K F + N+ T+ I+
Sbjct: 438 CTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYAR 497
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKLGYESNLR 309
+G +++ EM N+ P+E T+ SVLS C +E G + S+ +K G +
Sbjct: 498 NGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRK 557
Query: 310 VRNSLLYLYLKRGCIGEAQ-ILFKGMDDASLVTWNAMI 346
+ ++ L + G + +A+ +L + DA V W++++
Sbjct: 558 LYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLL 595
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+ L Y N R+ +K G + A F M +VT+N +I+G+++
Sbjct: 43 SDLVYTHNRRIDE-----LIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSR-------- 89
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
Y C A+ L++++ G++ TF SVLSVC + +G Q+H + I GF +
Sbjct: 90 -YGC--SLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCN 146
Query: 420 VIVGTSLINMY 430
+ V ++L+ +Y
Sbjct: 147 MFVRSALVGLY 157
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 35/324 (10%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G +++AR+ FD MP RNVV+WT L+ GYV N + A +F +M P N ++
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSW 144
Query: 178 ALNACTSLKSLKSGE--QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ L+ + + +L+ I TS+ + LC K GR++ A + F + E
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC----KEGRVDEAREIFDEMSE 200
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
++VI+WT ++ G + + +IF M + E + TS+L + +E ++
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQ 355
+ + N+++ ++G I +A+ +F M + + +W +I H +
Sbjct: 257 FEVMPV----KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER---- 308
Query: 356 SRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
NG EAL+LF + G++ T S+LSVC + + G+Q+HAQ ++
Sbjct: 309 ---------NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 414 TGFLSDVIVGTSLINMYIKCASVV 437
F DV V + L+ MYIKC +V
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELV 383
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 26/295 (8%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG--SYPSMNTL 175
K G +++AR FD M R+V+ WTT++ GY QN+R A +FD M S+ SM
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM--- 240
Query: 176 AIALNACTSLKSLKSGEQLHAYI-IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
L ++ E+L + +K I NA+ S + G + A + F +K
Sbjct: 241 ---LMGYVQNGRIEDAEELFEVMPVKPVI-----ACNAMISGLGQKGEIAKARRVFDSMK 292
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
E+N SW I +G + L +F+ M + ++P TL S+LS C + L G Q
Sbjct: 293 ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
VH+ + ++ ++ V + L+ +Y+K G + +++++F ++ WN++I+G+A
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA---- 408
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSG-MKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
+ G EAL +F ++ SG K + TF + LS C +G +I+
Sbjct: 409 -------SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 54 GFQ-EALSL----AKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXX 108
GF+ EAL L K+G + I +L C S + VH +++ D
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTL-ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 109 XXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS 168
KCG + ++ FD P ++++ W +++ GY + + A VF EM +GS
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428
Query: 169 Y-PSMNTLAIALNACTSLKSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLEFA 226
P+ T L+AC+ ++ G +++ + + + T+ + + + GR A
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 227 LKAFKRIK-EKNVISWTAAISSC 248
++ + E + W + + +C
Sbjct: 489 MEMIDSMTVEPDAAVWGSLLGAC 511
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 134/314 (42%), Gaps = 37/314 (11%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D Y PLL+ C + VHG +++TG H G M DA++ F
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVF 160
Query: 130 DHMPRRNVVAWTTLMLGYVQNS-------------------------------RPKHAFH 158
D M RNVV W ++ G+ + R + A
Sbjct: 161 DEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALE 220
Query: 159 VFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHI--DFDTSVGNALCSL 216
+F EM+ G P T+ L SL L +G+ +H+ + DF T VGNAL
Sbjct: 221 LFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT-VGNALVDF 279
Query: 217 YSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEYT 275
Y K G LE A F++++ +NV+SW IS +GK + G+ +F M+ E + PNE T
Sbjct: 280 YCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEAT 339
Query: 276 LTSVLSQCCEIQFLELGTQVHS-MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
VL+ C +E G ++ M + E+ +++ L + G I EA K M
Sbjct: 340 FLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM 399
Query: 335 D-DASLVTWNAMIA 347
+A+ W ++++
Sbjct: 400 PVNANAAMWGSLLS 413
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 32/290 (11%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H H+++ H N + A R F H+ NV+ + ++ Y
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGP 82
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK--YH-------- 202
P + F M G + T A L +C+SL L+ G+ +H +I+ +H
Sbjct: 83 PLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG 142
Query: 203 -IDFDTSVG--------------------NALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
++ TS G N + + G +E L FK++ E++++SW
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ ISS G+ ++ L +F EM+ + P+E T+ +VL + L+ G +HS
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 302 LG-YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
G ++ + V N+L+ Y K G + A +F+ M ++V+WN +I+G A
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSA 312
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 27/272 (9%)
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRL---EFALKAFKRIKEKNVISWTAAISSCG 249
++HA+++++ + + L S CG L ++A + F I+ NV+ + A I
Sbjct: 22 EIHAHLLRHFLHGSNLL---LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
G + L F M S + +EYT +L C + L G VH + G+ +
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK---------MMEQSRDNL 360
+R ++ LY G +G+AQ +F M + ++V WN MI G + +Q +
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 361 YACWNGT-----------EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
WN EAL LF ++ G D T +VL + + G+ IH+
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHS 258
Query: 410 QTIKTGFLSDVI-VGTSLINMYIKCASVVCAS 440
+G D I VG +L++ Y K + A+
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGDLEAAT 290
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLA 176
K G++E A F M RRNVV+W TL+ G N + + +FD M+ G P+ T
Sbjct: 282 KSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFL 341
Query: 177 IALNACTSLKSLKSGEQLHAYII-KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK- 234
L C+ ++ GE+L ++ ++ ++ T A+ L S+ GR+ A K K +
Sbjct: 342 GVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPV 401
Query: 235 EKNVISWTAAISSCGDSGKAK 255
N W + +S+C G K
Sbjct: 402 NANAAMWGSLLSACRSHGDVK 422
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 118/233 (50%), Gaps = 23/233 (9%)
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
+ ++ GE +H+ +I+ V N+L LY+ CG + A K F ++ EK++++W +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
I+ ++GK ++ L ++ EM S+ ++P+ +T+ S+LS C +I L LG +VH K+G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACW 364
NL N LL LY + G + EA+ LF M D + V+W ++I G L
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG-----------LAVNG 169
Query: 365 NGTEALNLFSKLNCS-GMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
G EA+ LF + + G+ TF +L C H +K GF
Sbjct: 170 FGKEAIELFKYMESTEGLLPCEITFVGILYACS-----------HCGMVKEGF 211
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
CG++ A + FD MP +++VAW +++ G+ +N +P+ A ++ EM G P T+
Sbjct: 36 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 95
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L+AC + +L G+++H Y+IK + + N L LY++CGR+E A F + +KN
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLTSVLSQCCEIQFLELGTQ-VH 296
+SWT+ I +G K+ + +F M S E + P E T +L C ++ G +
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
M + E + ++ L + G + +A K M ++V W ++
Sbjct: 216 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 268
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
+ LG +HS+ + G+ S + V+NSLL+LY G + A +F M + LV WN++I G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 349 HAKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
A+ NG EAL L++++N G+K D FT S+LS C ++ A G++
Sbjct: 64 FAE-------------NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 110
Query: 407 IHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+H IK G ++ L+++Y +C V
Sbjct: 111 VHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 160/343 (46%), Gaps = 36/343 (10%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G + +AR+ FD +P R+VV WT ++ GY++ + A +FD S ++ T
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD---RVDSRKNVVTWTA 114
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
++ K L E L + + ++ N + Y++ GR++ AL+ F + E+N
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
++SW + + + G+ + + +F M ++ + T+++ + ++ ++
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFD 226
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
C E N+ N+++ Y + I EA LF+ M + +WN MI G + E ++
Sbjct: 227 -CMP---ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNK 282
Query: 358 ---------DNLYACW-----------NGTEALNLFSKLNCSG-MKLDLFTFSSVLSVCG 396
+ W EALN+FSK+ G +K ++ T+ S+LS C
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 397 RMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+ V+G+QIH K+ + IV ++L+NMY K ++ A
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 148/314 (47%), Gaps = 66/314 (21%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G +++ARR FD MP RN+++W ++ GY QN+R A +F +++ + S NT+
Sbjct: 214 KNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF-QVMPERDFASWNTMIT 272
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
+++ E N C L F R+ EKN
Sbjct: 273 GF--------IRNREM-----------------NKACGL-------------FDRMPEKN 294
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
VISWT I+ ++ + ++ L +F +ML + +++PN T S+LS C ++ L G Q+H
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKG--MDDASLVTWNAMIAGHAKMME 354
+ +K ++ N V ++LL +Y K G + A+ +F + L++WN+MIA +A
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHG- 413
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
+G EA+ +++++ G K T+ ++L C HA ++
Sbjct: 414 ----------HGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS-----------HAGLVEK 452
Query: 415 G--FLSDVIVGTSL 426
G F D++ SL
Sbjct: 453 GMEFFKDLVRDESL 466
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 56 QEALS----LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXX 111
+EAL+ + ++G+ + + Y+ +L C D + Q +H I K+ + ++
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 112 XXXXXXKCGNMEDARRAFDH--MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
K G + AR+ FD+ + +R++++W +++ Y + K A ++++M G
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIK 200
PS T L AC+ ++ G + +++
Sbjct: 432 PSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 163/341 (47%), Gaps = 22/341 (6%)
Query: 59 LSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXK 118
+ + + G D + +++ C + VHG +++ G +D K
Sbjct: 98 MRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGK 157
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
C ++ AR+ F MP RN V+WT L++ YV++ + A +FD ++ + S N L
Sbjct: 158 CKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFD-LMPERNLGSWNALVDG 216
Query: 179 LNACTSLKSLKSGEQLHA-YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L +KSG+ ++A + D ++ Y+K G + A F+ + +
Sbjct: 217 L--------VKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVD 268
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V +W+A I +G+ + ++F EM ++N++P+E+ + ++S C ++ EL +V S
Sbjct: 269 VRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDS 328
Query: 298 -MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
+ ++ S+ V +L+ + K G + A LF+ M LV++ +M+ G A
Sbjct: 329 YLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMA------ 382
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
++ C G+EA+ LF K+ G+ D F+ +L VCG+
Sbjct: 383 ---IHGC--GSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 3/234 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G+M AR F+ +V AW+ L+LGY QN +P AF VF EM P +
Sbjct: 250 KGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVG 309
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTS-VGNALCSLYSKCGRLEFALKAFKRIKEK 236
++AC+ + + E++ +Y+ + F + V AL + +KCG ++ A K F+ + ++
Sbjct: 310 LMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR 369
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+++S+ + + G + +R+F +M+ E + P+E T +L C + + +E G +
Sbjct: 370 DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYF 429
Query: 297 S-MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
M K ++ + ++ L + G + EA L K M +A W +++ G
Sbjct: 430 ELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGG 483
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACTSLK 186
F+ +P W L+ GY + M+ TG + P T + + C++
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
++ G +H +++ D D VG + Y KC L A K F + E+N +SWTA +
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
+ SG+ ++ +F ++ P E
Sbjct: 185 AYVKSGELEEAKSMF------DLMP---------------------------------ER 205
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK---------MMEQSR 357
NL N+L+ +K G + A+ LF M ++++ +MI G+AK + E++R
Sbjct: 206 NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 358 DNLYACW---------NG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQ 406
W NG EA +FS++ +K D F ++S C +M F E+
Sbjct: 266 GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEK 325
Query: 407 I--HAQTIKTGFLSDVIVGTSLINMYIKCA 434
+ + F S +V +LI+M KC
Sbjct: 326 VDSYLHQRMNKFSSHYVV-PALIDMNAKCG 354
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 8/238 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
KC M+ AR FD ++VV W ++ GYV PK A +F EM G +P + T+
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 178 ALNACTSLKSLKSGEQLHAYIIKY-----HIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
L+AC L L++G++LH YI++ I T + NAL +Y+KCG ++ A++ F+
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+K++++ +W I A+ + +F EM + PNE T V+ C ++ G
Sbjct: 341 VKDRDLSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 293 TQVHSMCTKL-GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
+ S+ + E N++ ++ + + G + EA + + M + + + W ++
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGA 457
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 55/322 (17%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G ++ A + FD +P+ +V ++ G Q+ +P+ ++ EM G P T L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
AC+ L+ +G H ++++ + V NAL ++ CG L A + F + + +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
+W++ S GK + +R+F EM ++ +T L +C E+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCL-KCKEMD------------ 226
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
A+ LF + +VTWNAMI+G+
Sbjct: 227 --------------------------SARELFDRFTEKDVVTWNAMISGYVN-------- 252
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
C EAL +F ++ +G D+ T S+LS C + G+++H ++T +S
Sbjct: 253 ---CGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 420 VI-VGT----SLINMYIKCASV 436
I VGT +LI+MY KC S+
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSI 331
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 44/286 (15%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D + +L+ C S+ HG +++ G + CG++ A F
Sbjct: 111 DRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELF 170
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
D + + VAW+++ GY + + A +FDEM Y + + C
Sbjct: 171 DDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCL------ 220
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
KC ++ A + F R EK+V++W A IS
Sbjct: 221 -----------------------------KCKEMDSARELFDRFTEKDVVTWNAMISGYV 251
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN-- 307
+ G K+ L IF EM P+ T+ S+LS C + LE G ++H + S+
Sbjct: 252 NCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSI 311
Query: 308 ---LRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA 350
+ N+L+ +Y K G I A +F+G+ D L TWN +I G A
Sbjct: 312 YVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 6/235 (2%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G + ARR FD M R+ W ++ Y + A +F +M G PS +L
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+ C +L SL+ G Q+HA++++ D D V + L ++Y KCG L A F R K+
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-H 296
+I W + IS G ++ L+IF EM S PN+ TL ++L+ C LE G ++
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM---DDASLVTWNAMIAG 348
SM +K + + + + + G + +A L + M DA++ W A++
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV--WGALLGA 509
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 141/288 (48%), Gaps = 19/288 (6%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G +++AR FD M RNVV WTT++ GY QN+R A +F+ M ++ ++ L
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK---TEVSWTSMLL 242
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
S + + E +K I NA+ + + G + A + F +++++
Sbjct: 243 GYTLSGRIEDAEEFFEVMPMKPVI-----ACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMC 299
+W I + G + L +F +M + ++P+ +L S+LS C + L+ G QVH+
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 300 TKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDN 359
+ ++ ++ V + L+ +Y+K G + +A+++F ++ WN++I+G+A
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYA--------- 408
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
+ G EAL +F ++ SG + T ++L+ C +G +I
Sbjct: 409 --SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 31/318 (9%)
Query: 124 DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLA--IALNA 181
+AR F+ MP RNVV+WT ++ GY+Q A +F M P N ++ +
Sbjct: 97 EARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGG 150
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+ +L+ + + T++ LC + GR++ A F ++E+NV++W
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLC----REGRVDEARLIFDEMRERNVVTW 206
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
T I+ + + ++F E++ E + + ++ + I+ E +V M
Sbjct: 207 TTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV 265
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
+ N+++ + + G I +A+ +F M+D TW MI + + +
Sbjct: 266 IAC-------NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE------ 312
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
EAL+LF+++ G++ + S+LSVC + + G Q+HA ++ F DV
Sbjct: 313 -----LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY 367
Query: 422 VGTSLINMYIKCASVVCA 439
V + L+ MY+KC +V A
Sbjct: 368 VASVLMTMYVKCGELVKA 385
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 6/202 (2%)
Query: 53 RGFQ-EALSL-AKEGTEEVDSSF--YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXX 108
+GF+ EAL L A+ + V SF I +L C S + VH H+++ +D
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 109 XXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS 168
KCG + A+ FD ++++ W +++ GY + + A +F EM +G+
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 169 YPSMNTLAIALNACTSLKSLKSG-EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFAL 227
P+ TL L AC+ L+ G E + K+ + + + + G+++ A+
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 228 KAFKRIKEK-NVISWTAAISSC 248
+ + + K + W A + +C
Sbjct: 489 ELIESMTIKPDATVWGALLGAC 510
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 44/303 (14%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG K G KCG + +AR D M RR+VV+W +L++GY QN R
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
A V EM T+A L A + +T+ N
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVS----------------------NTTTENV 259
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
+ + F ++ +K+++SW I + + + ++ M ++ +P+
Sbjct: 260 M-----------YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
++TSVL C + L LG ++H + NL + N+L+ +Y K GC+ +A+ +F+
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
M +V+W AMI+ + G +A+ LFSKL SG+ D F + L
Sbjct: 369 NMKSRDVVSWTAMISAYG-----------FSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 393 SVC 395
+ C
Sbjct: 418 AAC 420
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 77/340 (22%)
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNA 212
P+ + ++L T YP + TL +H+ II + ++S+G
Sbjct: 38 PQETVFLLGQVLDT--YPDIRTL----------------RTVHSRIILEDLRCNSSLGVK 79
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN 272
L Y+ + A K F I E+NVI I S ++G +G+++F M N++P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 273 EYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFK 332
YT VL C + +G ++H TK+G S L V N L+ +Y K G + EA+++
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 333 GMDDASLVTWNAMIAGHAKMMEQSRDNLYAC----------------------------- 363
M +V+WN+++ G+A+ ++ D L C
Sbjct: 200 EMSRRDVVSWNSLVVGYAQN-QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 364 ------------------WN-----------GTEALNLFSKLNCSGMKLDLFTFSSVLSV 394
WN EA+ L+S++ G + D + +SVL
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 395 CGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
CG A G++IH + + ++++ +LI+MY KC
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG 358
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%)
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN 180
N+ + F M ++++V+W ++ Y++N+ P A ++ M G P ++ L
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 181 ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS 240
AC +L G+++H YI + + + + NAL +Y+KCG LE A F+ +K ++V+S
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
WTA IS+ G SG+ + +F ++ + P+ + L+ C LE G + T
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 136/318 (42%), Gaps = 55/318 (17%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTG-SYPSMNTLAIALNACT 183
ARR P + + TL+ GY ++ P ++ VF EM+ G +P + A + A
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 184 SLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
+ +SL++G Q+H +K+ ++ VG L +Y CG +EFA K F + + N+++W A
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I++C IF +ML N
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTS-------------------------------- 205
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
N +L Y+K G + A+ +F M V+W+ MI G A
Sbjct: 206 -------WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH------------ 246
Query: 364 WNGT--EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVI 421
NG+ E+ F +L +GM + + + VLS C + +F G+ +H K G+ V
Sbjct: 247 -NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 422 VGTSLINMYIKCASVVCA 439
V +LI+MY +C +V A
Sbjct: 306 VNNALIDMYSRCGNVPMA 323
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 8/251 (3%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G +E A+R F MP R+ V+W+T+++G N +F F E+ G P+ +L
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC+ S + G+ LH ++ K + SV NAL +YS+CG + A F+ ++EK
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 238 -VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
++SWT+ I+ G+ ++ +R+F EM + + P+ + S+L C +E G
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 297 SMCTKLGY-ESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA-----GH 349
S ++ + E + ++ LY + G + +A M + + W ++ G+
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 350 AKMMEQSRDNL 360
++ EQ + L
Sbjct: 455 IELAEQVKQRL 465
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 51/293 (17%)
Query: 119 CGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
CG +E AR+ FD M + N+VAW ++ + + A +FD+ML
Sbjct: 154 CGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKML-------------- 199
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
++ H + N + + Y K G LE A + F + ++
Sbjct: 200 --------------------VRNHTSW-----NVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
+SW+ I +G + F E+ M PNE +LT VLS C + E G +H
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDAS-LVTWNAMIAGHAKMMEQSR 357
K GY + V N+L+ +Y + G + A+++F+GM + +V+W +MIAG A M Q
Sbjct: 295 VEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLA-MHGQ-- 351
Query: 358 DNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
G EA+ LF+++ G+ D +F S+L C +GE ++
Sbjct: 352 --------GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSE 396
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM-PRR 135
+L C SF +I+HG + K G +CGN+ AR F+ M +R
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+V+WT+++ G + + + A +F+EM G P + L+AC+ ++ GE
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 196 AYIIK-YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV----ISWTAAISSCGD 250
+ + + YHI+ + + LY + G+L+ KA+ I + + I W + +C
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ---KAYDFICQMPIPPTAIVWRTLLGACSS 451
Query: 251 SG 252
G
Sbjct: 452 HG 453
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 24/279 (8%)
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
L C++ LK Q+H IIK+++ D + L S+ S G ++A F +++ +
Sbjct: 27 LRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 239 ISWTAAISSCGDSGKAKKGLRIFV-EMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+W I S + K ++ L +F+ M+S Q +++T V+ C + LGTQVH
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK------ 351
+ K G+ +++ +N+L+ LY K G + +F M S+V+W M+ G
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 352 ---MMEQSRDNLYACWNG-----------TEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
+ Q W EA LF ++ +K + FT ++L +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 398 MVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ + G +H K GF+ D +GT+LI+MY KC S+
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSL 302
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 127/297 (42%), Gaps = 34/297 (11%)
Query: 73 FYIP-LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFD- 130
F P +++ C+ S VHG +K G D KCG + R+ FD
Sbjct: 120 FTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDK 179
Query: 131 ------------------------------HMPRRNVVAWTTLMLGYVQNSRPKHAFHVF 160
MP RNVV+WT ++ YV+N RP AF +F
Sbjct: 180 MPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLF 239
Query: 161 DEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKC 220
M P+ T+ L A T L SL G +H Y K D +G AL +YSKC
Sbjct: 240 RRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKC 299
Query: 221 GRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIF-VEMLSENMQPNEYTLTSV 279
G L+ A K F ++ K++ +W + I+S G G ++ L +F +++P+ T V
Sbjct: 300 GSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGV 359
Query: 280 LSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC-IGEAQILFKGMD 335
LS C ++ G + + ++ S +R N+ + L++ + +A L + MD
Sbjct: 360 LSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMD 416
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 145/345 (42%), Gaps = 46/345 (13%)
Query: 86 SFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLML 145
+FS + +H I+K D G + A F+ + + W ++
Sbjct: 32 NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIR 91
Query: 146 GYVQNSRPKHAFHVFDEML--HTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHI 203
N +P+ A +F M+ H + T + AC + S++ G Q+H IK
Sbjct: 92 SLSVNHKPREALLLFILMMISHQSQFDKF-TFPFVIKACLASSSIRLGTQVHGLAIKAGF 150
Query: 204 DFDTSVGNALCSLYSKCGR-------------------------------LEFALKAFKR 232
D N L LY KCG+ L+ A F +
Sbjct: 151 FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQ 210
Query: 233 IKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
+ +NV+SWTA I++ + + + ++F M ++++PNE+T+ ++L ++ L +G
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM 352
VH K G+ + + +L+ +Y K G + +A+ +F M SL TWN+MI
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLG-- 328
Query: 353 MEQSRDNLYACWNGTEALNLF-SKLNCSGMKLDLFTFSSVLSVCG 396
++ C G EAL+LF + ++ D TF VLS C
Sbjct: 329 -------VHGC--GEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 108/217 (49%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G++ +AR F + R++V W TL+ GY QN A F M G P T++
Sbjct: 220 RIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSS 279
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
L+AC L G ++H+ I I+ + V NAL +Y+KCG LE A F+ I ++
Sbjct: 280 ILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRS 339
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V + IS GK K+ L +F M S +++P+E T +VL+ C FL G ++ S
Sbjct: 340 VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFS 399
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
+ N++ L++L + G + EA L K M
Sbjct: 400 EMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 161/369 (43%), Gaps = 47/369 (12%)
Query: 74 YIPLLQQ---CIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFD 130
++PL+ + C+ R +++H +K G D KCG + AR+ FD
Sbjct: 47 WVPLILRACACVVPRVVLG-KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFD 105
Query: 131 HMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM---LHTGSYPSM-----------NTLA 176
MP RNV W ++ GY+ N A +F+E+ +T ++ M
Sbjct: 106 EMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARE 165
Query: 177 IALNACTSLKSLKSGEQLHAYII---------KYHIDF---DTSVGNALCSLYSKCGRLE 224
+ LK++K+ + + K+ D + V + + S Y + G +
Sbjct: 166 LFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 225 FALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCC 284
A F R+ ++++ W I+ +G + + F M E +P+ T++S+LS C
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 285 EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNA 344
+ L++G +VHS+ G E N V N+L+ +Y K G + A +F+ + S+ N+
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS 345
Query: 345 MI---AGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAF 401
MI A H K G EAL +FS + +K D TF +VL+ C
Sbjct: 346 MISCLAIHGK--------------GKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFL 391
Query: 402 VQGEQIHAQ 410
++G +I ++
Sbjct: 392 MEGLKIFSE 400
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 141/328 (42%), Gaps = 49/328 (14%)
Query: 141 TTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLKSLKSGEQLHAYII 199
+ L+ ++ P A ++ + G Y P L + AC + + G+ LH+ I
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESI 73
Query: 200 KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKA----- 254
K+ + D VG++L S+Y KCG + A K F + E+NV +W A I +G A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 255 -------------------KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
G RI +E E + + L +V + + LG V
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS-----VMLGVYV 188
Query: 296 HS--MCTKLGYESNLRVRNSLLYL-----YLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
++ M + ++ +N+ ++ Y + G + EA+ +F + LV WN +IAG
Sbjct: 189 NNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAG 248
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
+A+ N Y+ +A++ F + G + D T SS+LS C + G ++H
Sbjct: 249 YAQ-------NGYS----DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 409 AQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ G + V +LI+MY KC +
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDL 325
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 12/222 (5%)
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
L+ A+ +C + ++G H +K D +G++L LY G +E A K F+ +
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
E+NV+SWTA IS + L+++ +M PN+YT T++LS C L G
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
VH +G +S L + NSL+ +Y K G + +A +F + +V+WN+MIAG+A+
Sbjct: 243 VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGL 302
Query: 355 QSRDNLYACWNGTEALNLFS-KLNCSGMKLDLFTFSSVLSVC 395
+A+ LF + SG K D T+ VLS C
Sbjct: 303 -----------AMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 2/271 (0%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
++ C R F H +K G D G +E+A + F+ MP RNV
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V+WT ++ G+ Q R ++ +M + S P+ T L+ACT +L G +H
Sbjct: 187 VSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQ 246
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKG 257
+ + + N+L S+Y KCG L+ A + F + K+V+SW + I+ G A +
Sbjct: 247 TLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQA 306
Query: 258 LRIFVEMLSEN-MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY 316
+ +F M+ ++ +P+ T VLS C ++ G + ++ + G + L + L+
Sbjct: 307 IELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVD 366
Query: 317 LYLKRGCIGEAQILFKGMD-DASLVTWNAMI 346
L + G + EA L + M + V W +++
Sbjct: 367 LLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 25/233 (10%)
Query: 218 SKCGRLEFALKAFKRIKE-KNVISWT---AAISSCGDSGKAKKGLRIFVE--MLSENMQP 271
SK G + F ++E + SW AIS D + K G+ +E ML ++
Sbjct: 51 SKSGGVSNRQDHFGFVQEFRQTDSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSS 110
Query: 272 --------NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
+ Y L+S + C + G+ H + K G+ S++ + +SL+ LY G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKL 383
+ A +F+ M + ++V+W AMI+G A+ W L L+SK+ S
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQE-----------WRVDICLKLYSKMRKSTSDP 219
Query: 384 DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ +TF+++LS C A QG +H QT+ G S + + SLI+MY KC +
Sbjct: 220 NDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 24/309 (7%)
Query: 83 DKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTT 142
D+R + Q+ HIMK+ CG ++ R+ FD MP R+ +W
Sbjct: 103 DQRGAHELQV---HIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAI 159
Query: 143 LMLGYVQNSRPKHAFHVFDEML---HTGSY--PSMNTLAIALNACTSLKSLKSGEQLHA- 196
+ LG ++ + A +F ML G++ PS L L AC ++ + G+Q+HA
Sbjct: 160 VFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSW-ILGCVLKACAMIRDFELGKQVHAL 218
Query: 197 -YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
+ + + + D+ + +L Y + LE A ++ N ++W A +++ G+ +
Sbjct: 219 CHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQ 278
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEI-QFLELGTQVHSMCTKLGYESNLRVRNSL 314
+ +R F+EM + ++ N ++VL C + G QVH+ KLG+ES+ +R L
Sbjct: 279 EVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRL 338
Query: 315 LYLYLKRGCIGEAQILFK-GMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLF 373
+ +Y K G + +A+ +FK D+ S+ WNAM+A + + + +Y EA+ L
Sbjct: 339 IEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQ------NGIY-----IEAIKLL 387
Query: 374 SKLNCSGMK 382
++ +G+K
Sbjct: 388 YQMKATGIK 396
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 37/286 (12%)
Query: 172 MNTLAIALN----ACTSLKSLKSGEQ-----LHAYIIKYHIDFDTSVGNALCSLYSKCGR 222
M++L++ N +C + +S + +Q L +I+K I + N L ++ CGR
Sbjct: 79 MDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGR 138
Query: 223 LEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPN----EYTLTS 278
L+ + F R+ ++ SW C + G + +FV ML + + + L
Sbjct: 139 LDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGC 198
Query: 279 VLSQCCEIQFLELGTQVHSMCTKLGY--ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD 336
VL C I+ ELG QVH++C KLG+ E + + SL+ Y + C+ +A ++ + +
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 337 ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC- 395
A+ V W A + N Y E + F ++ G+K ++ FS+VL C
Sbjct: 259 ANTVAWAAKVT-----------NDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS 307
Query: 396 -----GRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
GR G+Q+HA IK GF SD ++ LI MY K V
Sbjct: 308 WVSDGGR-----SGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKV 348
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 73 FYIPL-LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH 131
F +PL L+ C R ++H +K G G + AR+ FD
Sbjct: 135 FTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDD 194
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
MP R+ V +T + GYVQ +F EM ++G + L AC L +LK G
Sbjct: 195 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+ +H + I+ ++GNA+ +Y KC L++A F + ++VISW++ I G
Sbjct: 255 KSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLD 314
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
G ++F EML E ++PN T VLS C +E
Sbjct: 315 GDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVE 353
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 13/220 (5%)
Query: 217 YSKCGRL-EFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN-MQPNEY 274
YSK L +L F + +N+ SW I SG A K + +F+ M E+ ++P+++
Sbjct: 76 YSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDF 135
Query: 275 TLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
TL +L C + + G +H +C KLG+ S+L V ++L+ +Y+ G + A+ LF M
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 195
Query: 335 DDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSV 394
V + AM G+ + E L +F ++ SG LD S+L
Sbjct: 196 PVRDSVLYTAMFGGYVQQGE-----------AMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 395 CGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
CG++ A G+ +H I+ + +G ++ +MY+KC+
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCS 284
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 12/270 (4%)
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIALNACTSLK 186
F HMP RN+ +W ++ + ++ + +F M P TL + L AC++ +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
KSG+ +H +K V +AL +Y G+L A K F + ++ + +TA
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
G+A GL +F EM + + S+L C ++ L+ G VH C +
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG 366
L + N++ +Y+K + A +F M +++W+++I G+ D +
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYG------LDG-----DV 317
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCG 396
+ LF ++ G++ + TF VLS C
Sbjct: 318 VMSFKLFDEMLKEGIEPNAVTFLGVLSACA 347
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 159/392 (40%), Gaps = 81/392 (20%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y+ L++ R F +++H H++ +G +CG + DAR+ FD MP
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP 78
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+R++ ++ +N + + F EM G + L A +L + G+
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKM 138
Query: 194 LH-----------AYIIKYHIDF--------------------DTSVGNALCSLYSKCGR 222
+H A+I+ ID D V NA+ S Y+ +
Sbjct: 139 IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQ 198
Query: 223 LEFALKAFKRIK---------------------------------------EKNVISWTA 243
+ AL K +K + +V+SWT+
Sbjct: 199 ADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTS 258
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
IS + + +K F +ML+ + PN T+ ++L C + +++ G ++H G
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
E + VR++LL +Y K G I EA ILF+ + VT+N+MI +A +
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK------ 372
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
A+ LF ++ +G KLD TF+++L+ C
Sbjct: 373 -----AVELFDQMEATGEKLDHLTFTAILTAC 399
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 118/238 (49%), Gaps = 11/238 (4%)
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGD 250
G LHA+++ I T + L + Y +CG++ A K F + ++++ I +C
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
+G ++ L F EM + ++ + + + S+L + E G +H + K YES+ +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEAL 370
+SL+ +Y K G +G A+ +F + + LV +NAMI+G+A + EAL
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQAD-----------EAL 203
Query: 371 NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
NL + G+K D+ T+++++S M + +I G+ DV+ TS+I+
Sbjct: 204 NLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+ +VV+WT+++ G V N + + AF F +ML G YP+ T+ L ACT+L +K G++
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKE 309
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H Y + ++ V +AL +Y KCG + A+ F++ +K +++ + I + G
Sbjct: 310 IHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGL 369
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH-SMCTKLGYESNLRVRN 312
A K + +F +M + + + T T++L+ C +LG + M K L
Sbjct: 370 ADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA 429
Query: 313 SLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
++ L + G + EA + K M + L W A++A
Sbjct: 430 CMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAA 466
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
+S+ I LL C + +HG+ + TG + KCG + +A F
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
P++ V + +++ Y + A +FD+M TG T L AC+
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 190 SGEQLHAYII-KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISS 247
G+ L + KY I + L + G+L A + K ++ E ++ W A +++
Sbjct: 407 LGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAA 466
Query: 248 CGDSGKAKKGLRIFVEMLSENMQP----NEYTLTSV 279
C + G + RI + L+E ++P N LTS+
Sbjct: 467 CRNHGNMELA-RIAAKHLAE-LEPENSGNGLLLTSL 500
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 13/273 (4%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML--HTGSYPSMNTLAIALNAC 182
A + FD MP R++V+W +L+ GY F V M+ G P+ T ++AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 183 TSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWT 242
S + G +H ++K+ + + V NA + Y K G L + K F+ + KN++SW
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
I +G A+KGL F +P++ T +VL C ++ + L +H +
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYA 362
G+ N + +LL LY K G + ++ +F + + W AM+A +A
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH---------- 314
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
G +A+ F + G+ D TF+ +L+ C
Sbjct: 315 -GFGRDAIKHFELMVHYGISPDHVTFTHLLNAC 346
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 2/276 (0%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
++ ++ C+ S + + +HG +MK G E+ K G++ + + F+ +
Sbjct: 137 FLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS 196
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+N+V+W T+++ ++QN + F+ G P T L +C + ++ +
Sbjct: 197 IKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQG 256
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK 253
+H I+ + + AL LYSK GRLE + F I + ++WTA +++ G
Sbjct: 257 IHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGF 316
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ-VHSMCTKLGYESNLRVRN 312
+ ++ F M+ + P+ T T +L+ C +E G +M + + L +
Sbjct: 317 GRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYS 376
Query: 313 SLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
++ L + G + +A L K M + S W A++
Sbjct: 377 CMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 6/222 (2%)
Query: 33 QNISLQKSHKFNTHLDPSRYRGFQEA----LSLAKEGTEEVDSSFYIPLLQQCIDKRSFS 88
+++S++ +NT + G E ++++ E D + ++ +L+ C D
Sbjct: 193 EDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 89 DTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYV 148
Q +HG IM G + K G +ED+ F + + +AWT ++ Y
Sbjct: 253 LAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA 312
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK-YHIDFDT 207
+ + A F+ M+H G P T LNAC+ ++ G+ + K Y ID
Sbjct: 313 THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRL 372
Query: 208 SVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSC 248
+ + L + G L+ A K + E + W A + +C
Sbjct: 373 DHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
+EA+ L +V+ Y LLQ+C ++ ++ + +H + G +
Sbjct: 92 LKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLI 151
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
G+++ A F + R+++ W ++ GYVQ + ++ +M P T
Sbjct: 152 LYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYT 211
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
A AC++L L+ G++ HA +IK I + V +AL +Y KC + F ++
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS 271
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+NVI+WT+ IS G GK + L+ F +M E +PN T VL+ C ++ G +
Sbjct: 272 TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE 331
Query: 295 -VHSMCTKLGYE 305
+SM G E
Sbjct: 332 HFYSMKRDYGIE 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 264 MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
+ S +Q T +L +C + + G ++H+ +G+ N ++ LL LY G
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGD 158
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHA-KMMEQSRDNLYACWNGTEALNLFSKLNCSGMK 382
+ A ILF+ + L+ WNAMI+G+ K +EQ E L ++ + + +
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQ------------EGLFIYYDMRQNRIV 206
Query: 383 LDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
D +TF+SV C + G++ HA IK S++IV ++L++MY KC+S
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 162/376 (43%), Gaps = 67/376 (17%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G EDA FD MP RNVV+W TL+ G ++N + A VFD M PS + ++
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM------PSRDV--VSW 203
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
NA G + + + + ++ Y + G + A + F + E+N++
Sbjct: 204 NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLS--ENMQPNEYTLTSVLSQC--CEIQFLELGTQV 295
SWTA IS + ++ L +F+EM + + PN TL S+ C ++F LG Q+
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 296 HSMCTKLGYES---NLRVRNSLLYLYLKRGCIGEAQ--------------ILFKGMDDAS 338
H+ G+E+ + R+ SL+++Y G I AQ I+ + + +
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGD 383
Query: 339 L----------------VTWNAMIAGHAKMMEQSR---------DNLYACWNG------- 366
L V+W +MI G+ + + SR D W
Sbjct: 384 LERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQ 443
Query: 367 ----TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG--FLSDV 420
EA +L S + G+K T+S +LS G QG+ IH KT + D+
Sbjct: 444 NELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDL 503
Query: 421 IVGTSLINMYIKCASV 436
I+ SL++MY KC ++
Sbjct: 504 ILQNSLVSMYAKCGAI 519
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 147/360 (40%), Gaps = 85/360 (23%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHT--GSYPSMNTLAI 177
G++ +A R F MP RN+V+WT ++ G+ N + A +F EM P+ TL
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 178 ALNACTSL--KSLKSGEQLHAYIIK---YHIDFDTSVGNALCSLYS-------------- 218
AC L + + GEQLHA +I +D D + +L +Y+
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 219 ---------------KCGRLEFALKAFKRIKE-KNVISWTAAISSCGDSGKAKKGLRIF- 261
K G LE A F+R+K + +SWT+ I ++G + +F
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 262 ------------------------------VEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+M+ ++P T + +LS L+
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 292 GTQVHSMCTKLG--YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG- 348
G +H + K Y+ +L ++NSL+ +Y K G I +A +F M V+WN+MI G
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 349 -HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
H + ++ ALNLF ++ SG K + TF VLS C +G ++
Sbjct: 545 SHHGLADK-------------ALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ G++ A F + ++ V WT ++ G VQN A + +M+ G P +T ++
Sbjct: 412 EAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSV 471
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHI--DFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
L++ + +L G+ +H I K D D + N+L S+Y+KCG +E A + F ++ +
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
K+ +SW + I G A K L +F EML +PN T VLS C + G ++
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 143/331 (43%), Gaps = 70/331 (21%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G +++AR F+ MP RN+V ++ GYV+ R A+ +F EM
Sbjct: 89 KTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKN----------- 137
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN 237
++ + T + ALC GR E A++ F + E+N
Sbjct: 138 --------------------VVSW-----TVMLTALCD----DGRSEDAVELFDEMPERN 168
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
V+SW ++ +G +K ++F M S ++ + +++ E +E +
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFG 224
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR 357
+ E N+ S++Y Y + G + EA LF M + ++V+W AMI+G A
Sbjct: 225 DMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA------- 273
Query: 358 DNLYACWNG--TEALNLFSKL--NCSGMKLDLFTFSSVLSVCGRM-VAFVQ-GEQIHAQT 411
WN EAL LF ++ + + + T S+ CG + V F + GEQ+HAQ
Sbjct: 274 ------WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 412 IKTGFLS---DVIVGTSLINMYIKCASVVCA 439
I G+ + D + SL++MY + A
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNS-RPKHAFHVFDEM-LHTGSYPSMNTL 175
+ G+ME A+ FD MP+R++V+W +L+ GY + + +F EM + P T+
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
++ + L G +H +I+ + D + +AL +Y KCG +E A FK E
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
K+V WT+ I+ G ++ L++F M E + PN TL +VL+ C +E G V
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 296 HS-MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
+ M K G++ SL+ L + G + EA+
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAK 525
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 147/344 (42%), Gaps = 35/344 (10%)
Query: 121 NMEDARRAF-DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
N++ A+ F + P NV + T M+ V +S+ F ++ M+ P T +
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNT-MISAVSSSK-NECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 180 NACTSLKSLKSGEQLHAYIIKYH-IDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV 238
A + L +K Q+H +II + + N+L Y + G A K F R+ +V
Sbjct: 141 KASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDV 197
Query: 239 ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSM 298
S+ I G + + L+++ +M+S+ ++P+EYT+ S+L C + + LG VH
Sbjct: 198 SSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW 257
Query: 299 CTKLG--YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM---- 352
+ G Y SNL + N+LL +Y K G A+ F M + +WN M+ G ++
Sbjct: 258 IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDME 317
Query: 353 -----MEQSRDNLYACWNGTEALNLFSKLNC---------------SGMKLDLFTFSSVL 392
+Q WN L +SK C +K D T S++
Sbjct: 318 AAQAVFDQMPKRDLVSWNSL--LFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Query: 393 SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
S G +H I+ D + ++LI+MY KC +
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 46/311 (14%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
GN A + F MP +V ++ +++GY + A ++ +M+ G P T+ L
Sbjct: 180 GNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLL 239
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSV--GNALCSLYSKCGRLEFALKAFKRIKEKN 237
C L ++ G+ +H +I + + +++ NAL +Y KC A +AF +K+K+
Sbjct: 240 VCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKD 299
Query: 238 VISWTAAISS---CGDS-----------------------GKAKKGL------RIFVEM- 264
+ SW + GD G +KKG +F EM
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 265 LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
+ E ++P+ T+ S++S L G VH + +L + + + ++L+ +Y K G I
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 325 GEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLD 384
A ++FK + + W +MI G L NG +AL LF ++ G+ +
Sbjct: 420 ERAFMVFKTATEKDVALWTSMITG-----------LAFHGNGQQALQLFGRMQEEGVTPN 468
Query: 385 LFTFSSVLSVC 395
T +VL+ C
Sbjct: 469 NVTLLAVLTAC 479
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D + L+ + S + VHG +++ D KCG +E A F
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
++V WT+++ G + + A +F M G P+ TL L AC+ ++
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVE 486
Query: 190 SGEQLHAYII-KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI------SWT 242
G + ++ K+ D +T +L L + GR+E A K I +K + W
Sbjct: 487 EGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA----KDIVQKKMPMRPSQSMWG 542
Query: 243 AAISSC 248
+ +S+C
Sbjct: 543 SILSAC 548
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTLA 176
K +E R F MP RN VAWT ++ GY+ + + EM+ G + TL
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDF-------DTSVGNALCSLYSKCGRLEFALKA 229
L+AC +L G +H Y +K + D VG AL +Y+KCG ++ ++
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
F+ ++++NV++W A S GK + + +F +M+ E ++P++ T T+VLS C +
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIV 367
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
+ G + G E + ++ L + G I EA+IL + M
Sbjct: 368 DEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREM 412
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 141/299 (47%), Gaps = 34/299 (11%)
Query: 171 SMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDF--DTSVGNALCSLYSKCGRLEFALK 228
S + + L C L+ G++LHA + + + + NAL Y+ G + A K
Sbjct: 5 SYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQK 64
Query: 229 AFKRI--KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI 286
F I EK+ + WT +SS G +++FVEM + ++ ++ ++ + C ++
Sbjct: 65 LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKL 124
Query: 287 QFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMI 346
+ L Q H + K+G ++++V N+L+ +Y K G + E + +F+ +++ S+V+W ++
Sbjct: 125 EDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL 184
Query: 347 AGHAKM--MEQSRDNLY-------ACWN-----------GTEALNLFSKL--NCSGMKLD 384
K +E+ R+ + W E L L +++ C G L+
Sbjct: 185 DTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRC-GHGLN 243
Query: 385 LFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL-------SDVIVGTSLINMYIKCASV 436
T S+LS C + V G +H +K + DV+VGT+L++MY KC ++
Sbjct: 244 FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 115/248 (46%), Gaps = 11/248 (4%)
Query: 91 QIVHGHIMKTGN-HEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQ 149
+IVHG + K G +E K G++ AR+ FD MP R V W ++ GY
Sbjct: 131 RIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCS 190
Query: 150 -----NSRPKHAFHVFDEM--LHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIK-- 200
N + A +F +G P+ T+ L+A + L+ G +H YI K
Sbjct: 191 HKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLG 250
Query: 201 YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRI 260
+ + D +G AL +YSKCG L A F+ +K KNV +WT+ + +G+ + +
Sbjct: 251 FTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNL 310
Query: 261 FVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV-HSMCTKLGYESNLRVRNSLLYLYL 319
M ++PNE T TS+LS I +E G ++ SM T+ G + ++ L
Sbjct: 311 LNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLG 370
Query: 320 KRGCIGEA 327
K G I EA
Sbjct: 371 KAGRIQEA 378
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 159/362 (43%), Gaps = 37/362 (10%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA----F 129
++ LLQQ + ++ + +H ++ G H++ K ++ A F
Sbjct: 10 FLSLLQQ--NSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVF 67
Query: 130 DHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN--TLAIALNACTSLKS 187
+ + TL+ + S+P+ + +F S +N T L AC S
Sbjct: 68 PRFGHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSAS 123
Query: 188 ---LKSGEQLHAYIIKYHIDFDTS-VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTA 243
L+ G +H + K +++ +G L Y+K G L +A K F + E+ ++W A
Sbjct: 124 SSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNA 183
Query: 244 AIS---SCGDSGK--AKKGLRIFVEM--LSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
I S D G A+K + +F ++P + T+ VLS + LE+G+ VH
Sbjct: 184 MIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 297 SMCTKLGY--ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME 354
KLG+ E ++ + +L+ +Y K GC+ A +F+ M ++ TW +M G
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATG------ 297
Query: 355 QSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKT 414
L G E NL +++ SG+K + TF+S+LS R + V+ +++KT
Sbjct: 298 -----LALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAY-RHIGLVEEGIELFKSMKT 351
Query: 415 GF 416
F
Sbjct: 352 RF 353
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 18/193 (9%)
Query: 253 KAKKGLRIFVEMLSEN--MQPNEYTLTSVLSQCCEIQF---LELGTQVHSMCTKLG--YE 305
K + +RIF S++ + NE T VL C L +G VH M KLG YE
Sbjct: 86 KPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYE 145
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
S L + +LL+ Y K G + A+ +F M + + VTWNAMI G+ ++ N
Sbjct: 146 SEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNH------N 198
Query: 366 GTEALNLFSKLNC--SGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS--DVI 421
+A+ LF + +C SG++ T VLS + G +H K GF DV
Sbjct: 199 ARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF 258
Query: 422 VGTSLINMYIKCA 434
+GT+L++MY KC
Sbjct: 259 IGTALVDMYSKCG 271
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G++ A + FD MP +N+++W ++ Y+ + P + +F EM+ G + +TL + L
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI 239
NAC LK G +HA +I+ ++ + AL +Y KC + A + F + +N +
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 240 SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS-M 298
+W I + G+ + GL +F M++ ++P+E T VL C + G +S M
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Query: 299 CTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD 336
+ + N + + LY G EA+ K + D
Sbjct: 378 VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 48/363 (13%)
Query: 83 DKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTT 142
D S + VH ++ +GN D + G+ + + + +
Sbjct: 31 DSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANP 88
Query: 143 LMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH 202
+ Y+ +S PK A + ++L G P T ++ + SG+ H IK+
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 203 IDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSC---GDSGKAKK--- 256
D V N+L +Y+ CG L+ A K F I +++++SW + I+ GD A K
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 257 -------------------------GLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ +F EM+ Q NE TL +L+ C L+
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
G VH+ + S++ + +L+ +Y K +G A+ +F + + VTWN MI H
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH-- 326
Query: 352 MMEQSRDNLYACWNGTE--ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
C +G L LF + ++ D TF VL C R QG+ ++
Sbjct: 327 -----------CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS 375
Query: 410 QTI 412
+
Sbjct: 376 LMV 378
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 36/271 (13%)
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE---KNVISWTAAISSCG 249
Q+HA +I +D+S L S+ G + + ++ I + N + +SS
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVFKAYLVSS-- 97
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS----QCCEIQFLELGTQVHSMCTKLGYE 305
K+ L + ++L P+ YT S++S CC ++ G H K G +
Sbjct: 98 ---SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCC----VDSGKMCHGQAIKHGCD 150
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHA---------KMMEQS 356
L V+NSL+++Y G + A+ LF + +V+WN++IAG K+ ++
Sbjct: 151 QVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM 210
Query: 357 RDNLYACWN-------GTE----ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE 405
D WN G +++LF ++ +G + + T +L+ CGR +G
Sbjct: 211 PDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGR 270
Query: 406 QIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
+HA I+T S V++ T+LI+MY KC V
Sbjct: 271 SVHASLIRTFLNSSVVIDTALIDMYGKCKEV 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 11/212 (5%)
Query: 55 FQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXX 114
F+E + +G E S + LL C + + VH +++T +
Sbjct: 238 FREMVRAGFQGNE----STLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALID 293
Query: 115 XXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNT 174
KC + ARR FD + RN V W ++L + + RP+ +F+ M++ P T
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVT 353
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC--SLYSKCGRLEFALKAFKR 232
L C + G+ ++ ++ + G+ C +LYS G E A +A K
Sbjct: 354 FVGVLCGCARAGLVSQGQSYYSLMVD-EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKN 412
Query: 233 IKEKNVIS----WTAAISSCGDSGKAKKGLRI 260
+ +++V W +SS +G G I
Sbjct: 413 LPDEDVTPESTKWANLLSSSRFTGNPTLGESI 444
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 58/332 (17%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
+ +A + FD +P +V++ T ++ +V+ SR A F +L G P+ T + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRL------------------ 223
T+ + +K G+QLH Y +K + + VG+A+ + Y K L
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 224 -------------EFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
E AL F+ + E++V++W A I +G+ ++ + FV+ML E +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 271 -PNEYTLTSVLSQCCEIQFLELGTQVHSMCTK-LGYESNLRVRNSLLYLYLKRGCIGEAQ 328
PNE T ++ I G +H+ K LG N+ V NSL+ Y K G + ++
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 329 ILFKGMDDA--SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL-NCSGMKLDL 385
+ F +++ ++V+WN+MI G+A R G EA+ +F K+ + ++ +
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYA---HNGR--------GEEAVAMFEKMVKDTNLRPNN 331
Query: 386 FTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFL 417
T VL C HA I+ G++
Sbjct: 332 VTILGVLFACN-----------HAGLIQEGYM 352
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 226 ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCE 285
A K F I E +VIS TA I + + + F +L ++PNE+T +V+
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 286 IQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLK-------RGCIG------------- 325
+ ++LG Q+H K+G SN+ V +++L Y+K R C
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 326 -----------EAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFS 374
EA LF+ M + S+VTWNA+I G ++ EA+N F
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE-----------EAVNTFV 214
Query: 375 KLNCSGMKL-DLFTFSSVLSVCGRMVAFVQGEQIHAQTIK-TGFLSDVIVGTSLINMYIK 432
+ G+ + + TF ++ + + G+ IHA IK G +V V SLI+ Y K
Sbjct: 215 DMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSK 274
Query: 433 CASV 436
C ++
Sbjct: 275 CGNM 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 118 KCGNMEDARRAFDHM--PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH-TGSYPSMNT 174
KCGNMED+ AF+ + +RN+V+W +++ GY N R + A +F++M+ T P+ T
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT----SVGNALC--SLYSKCGRLEFALK 228
+ L AC ++ G + Y K D+D + + C + S+ GR + A +
Sbjct: 334 ILGVLFACNHAGLIQEG---YMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEE 390
Query: 229 AFKRIK-EKNVISWTAAISSC 248
K + + + W A + C
Sbjct: 391 LIKSMPLDPGIGFWKALLGGC 411
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 103/188 (54%), Gaps = 6/188 (3%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS---YPSMNTLA 176
G M+ A F MP +VV+WTT++ G+ + A VF EM+ P+ T
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 177 IALNACTSLK--SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
L++C + ++ G+Q+H Y++ I T++G AL +Y K G LE AL F +I+
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
+K V +W A IS+ +G+ K+ L +F M S + PN TL ++L+ C + ++LG Q
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQ 345
Query: 295 VH-SMCTK 301
+ S+C++
Sbjct: 346 LFSSICSE 353
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 116/296 (39%), Gaps = 51/296 (17%)
Query: 140 WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII 199
+ TL+ Y+ K + +F ML + P+ T + A S S+ G LH +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 200 KYHIDFDTSVGNALCSLYSK----------------------------CGR---LEFALK 228
K +D V + Y + CGR +++A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 229 AFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN---MQPNEYTLTSVLSQCCE 285
F+R+ +V+SWT I+ G K L +F EM+ + PNE T SVLS C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 286 IQ--FLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWN 343
+ LG Q+H + +LL +Y K G + A +F + D + WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 344 AMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
A+I+ A NG +AL +F + S + + T ++L+ C R
Sbjct: 294 AIISALAS-------------NGRPKQALEMFEMMKSSYVHPNGITLLAILTACAR 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 74 YIPLLQQC--IDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDH 131
++ +L C D+ + +HG++M K G++E A FD
Sbjct: 224 FVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ 283
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG 191
+ + V AW ++ N RPK A +F+ M + +P+ TL L AC K + G
Sbjct: 284 IRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Query: 192 EQLHAYI 198
QL + I
Sbjct: 344 IQLFSSI 350
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN-TLA 176
K G++ AR FD M R+VV W++++ GYV+ A +FD+M+ GS + T+
Sbjct: 186 KSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMV 245
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR--IK 234
+ AC L +L G+ +H YI+ H+ + +L +Y+KCG + A F R +K
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 235 EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
E + + W A I G ++ L++F +M + P+E T +L+ C
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAAC 354
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 49/312 (15%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
G+++ A + + W ++ G+ + P+ + V+ +ML G P T +
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLY---------------------- 217
+ + L + K G LH ++K +++D + N L +Y
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 218 ---------SKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS-E 267
+K G + A F + E++V++W++ I G+ K L IF +M+
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 268 NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEA 327
+ + NE T+ SV+ C + L G VH + + ++ SL+ +Y K G IG+A
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 328 QILF--KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKL 383
+F + + + WNA+I G A +G E+L LF K+ S +
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLAS-------------HGFIRESLQLFHKMRESKIDP 342
Query: 384 DLFTFSSVLSVC 395
D TF +L+ C
Sbjct: 343 DEITFLCLLAAC 354
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 215 SLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEY 274
S S G +++A K ++ + W I +S +K + ++++ML + P+
Sbjct: 50 SALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHM 109
Query: 275 TLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
T ++ + +LG +H K G E +L + N+L+++Y A+ LF M
Sbjct: 110 TYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEM 169
Query: 335 DDASLVTWNAMIAGHAK---------MMEQSRDNLYACWNG-----------TEALNLFS 374
+LVTWN+++ +AK + ++ + W+ +AL +F
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 375 KLNCSG-MKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKC 433
++ G K + T SV+ C + A +G+ +H + VI+ TSLI+MY KC
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC 289
Query: 434 ASV 436
S+
Sbjct: 290 GSI 292
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 8/231 (3%)
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
AR FD MP R++V+W +L+ GY Q + + A +FDEM+ G P + L+AC
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
+ G+ +H Y + + D+ + L Y+KCG ++ A++ F+ +K + +W A
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
I+ G + + F +M+S ++P+ T SVL C ++ + L Y
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSL-Y 380
Query: 305 ESNLRVRN--SLLYLYLKRGCIGEA-----QILFKGMDDASLVTWNAMIAG 348
+ N +++ + L + G I EA Q+ G + L+ W+ ++ G
Sbjct: 381 DVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGG 431
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 160 FDEMLHTGSYPSMNTLAIALNACTSLKS--LKSGEQLHAYIIKYHIDFDTSVGNALCSLY 217
F EM P +T AC + K+ L + LH +++ + D N L +Y
Sbjct: 103 FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVY 162
Query: 218 SKCGRLEFALKAFK------------------------RIKE-------KNVISWTAAIS 246
S ++ AL+ F R +E ++++SW + IS
Sbjct: 163 SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
++ +++F EM++ ++P+ + S LS C + + G +H +
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNG 366
+ + L+ Y K G I A +F+ D +L TWNAMI G L NG
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITG-----------LAMHGNG 331
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
++ F K+ SG+K D TF SVL C
Sbjct: 332 ELTVDYFRKMVSSGIKPDGVTFISVLVGC 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 259 RIFVEMLSENMQPNEYTLTSVLSQCCEIQF--LELGTQVHSMCTKLGYESNLRVRNSLLY 316
R FVEM ++ P+ +T V C + L L +H + G S+L N+L+
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 317 LYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSR-----DNL----YACWNG- 366
+Y I A LF +VT+N +I G K E R D++ WN
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 367 ----------TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
EA+ LF ++ G+K D S LS C + + +G+ IH T +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 417 LSDVIVGTSLINMYIKCASVVCA 439
D + T L++ Y KC + A
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTA 303
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIA 178
G+ E A + MP R VV+WTT++ GY + +PK A +F M+ + P+ T+
Sbjct: 203 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAI 262
Query: 179 LNACTSLKSLKSGEQLHAYIIKY-HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK--E 235
L A +L LK +HAY+ K + D V N+L Y+KCG ++ A K F I
Sbjct: 263 LPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGR 322
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC-----CEIQFLE 290
KN++SWT IS+ G K+ + +F +M ++PN T+ SVL+ C E +FLE
Sbjct: 323 KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLE 382
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ-ILFKGMDDASLVTWNAMIAG 348
++M + +++ L+ + ++G + EA+ I + + V W ++
Sbjct: 383 F---FNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Query: 211 NALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENM 269
N + + + G E AL +++ + V+SWT I K K+ + +F M++ + +
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY-ESNLRVRNSLLYLYLKRGCIGEAQ 328
+PNE T+ ++L + L++ VH+ K G+ ++RV NSL+ Y K GCI A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 329 ILFKGMDDA--SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
F + + +LV+W MI+ A G EA+++F + G+K +
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFA-----------IHGMGKEAVSMFKDMERLGLKPNRV 361
Query: 387 TFSSVLSVC 395
T SVL+ C
Sbjct: 362 TMISVLNAC 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKM-------- 352
KLG+ES++ V+ +L+ +YL G + +A +F M + + VTWN MI G +
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 353 -MEQSRDNLYACWNGT-----------EALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMV 399
+E+ + W EA+ LFS++ C +K + T ++L +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 400 AFVQGEQIHAQTIKTGFLS-DVIVGTSLINMYIKCASVVCA 439
+HA K GF+ D+ V SLI+ Y KC + A
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSA 311
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 7/259 (2%)
Query: 78 LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV 137
L+ C S +H I + G D K G++ A + FD MP R+V
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL-HA 196
+W L+ G V +R A ++ M G S T+ AL AC+ L +K GE + H
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG 235
Query: 197 YIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK-EKNVISWTAAISSCGDSGKAK 255
Y + + V NA +YSKCG ++ A + F++ +K+V++W I+ G+A
Sbjct: 236 YS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
+ L IF ++ ++P++ + + L+ C +E G V + G E N++ ++
Sbjct: 291 RALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVV 350
Query: 316 YLYLKRGCIGEAQILFKGM 334
L + G + EA + M
Sbjct: 351 DLLSRAGRLREAHDIICSM 369
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 35/332 (10%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKC-----GNMEDARRAFDH 131
++Q+C+ SFS + + H + G+ + +C G++ A + F +
Sbjct: 9 MIQKCV---SFSQIKQLQSHFLTAGHFQ---SSFLRSRLLERCAISPFGDLSFAVQIFRY 62
Query: 132 MPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP------SMNTLAIALNACTSL 185
+P+ W ++ G+ +S P AF + ML S T + L AC
Sbjct: 63 IPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA 122
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAI 245
+ +QLH I + + D+ + L YSK G L A K F + ++V SW A I
Sbjct: 123 LCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALI 182
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
+ +A + + ++ M +E ++ +E T+ + L C + ++ G + GY
Sbjct: 183 AGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH-----GYS 237
Query: 306 S-NLRVRNSLLYLYLKRGCIGEA-QILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYAC 363
+ N+ V N+ + +Y K G + +A Q+ + S+VTWN MI G A E R
Sbjct: 238 NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHR------ 291
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
AL +F KL +G+K D ++ + L+ C
Sbjct: 292 -----ALEIFDKLEDNGIKPDDVSYLAALTAC 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 23/226 (10%)
Query: 218 SKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENM------QP 271
S G L FA++ F+ I + W A I S + ML ++ +
Sbjct: 48 SPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+ T + L C Q+H + G ++ + +LL Y K G + A LF
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV 391
M + +WNA+IAG L + +EA+ L+ ++ G++ T +
Sbjct: 168 DEMPVRDVASWNALIAG-----------LVSGNRASEAMELYKRMETEGIRRSEVTVVAA 216
Query: 392 LSVCGRMVAFVQGEQIHAQTIKTGFLSD-VIVGTSLINMYIKCASV 436
L C + +GE I G+ +D VIV + I+MY KC V
Sbjct: 217 LGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFV 257
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 155/384 (40%), Gaps = 50/384 (13%)
Query: 67 EEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMED-- 124
+E+ S I L CI+ + + +HGH+++ G + K G D
Sbjct: 45 KELLVSSLISKLDDCIN---LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY 101
Query: 125 ARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTS 184
ARR + + RN WT ++ GY + A ++ M P T + L AC +
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVIS---- 240
+K L G Q HA + VGN + +Y KC ++ A K F + E++VIS
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 241 ---------------------------WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE 273
WTA ++ + K ++ L F M ++ +E
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 274 YTLTSVLSQCCEIQFLELGTQVHSMCTKLGY--ESNLRVRNSLLYLYLKRGCIGEAQILF 331
T+ +S C ++ + + + K GY ++ + ++L+ +Y K G + EA +F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 332 KGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL-NCSGMKLDLFTFSS 390
M++ ++ T+++MI G L EAL+LF + + +K + TF
Sbjct: 342 MSMNNKNVFTYSSMILG-----------LATHGRAQEALHLFHYMVTQTEIKPNTVTFVG 390
Query: 391 VLSVCGRMVAFVQGEQIHAQTIKT 414
L C QG Q+ +T
Sbjct: 391 ALMACSHSGLVDQGRQVFDSMYQT 414
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 27/289 (9%)
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRL--EFALKA 229
+++L L+ C +L +K Q+H ++++ +D + L +K G +A +
Sbjct: 49 VSSLISKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+ ++ +N WTA I GK + + ++ M E + P +T +++L C ++ L
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
LG Q H+ +L + V N+++ +Y+K I A+ +F M + +++W +IA +
Sbjct: 166 NLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAY 225
Query: 350 AK---------MMEQSRDNLYACWNGT-----------EALNLFSKLNCSGMKLDLFTFS 389
A+ + E W EAL F ++ SG++ D T +
Sbjct: 226 ARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 390 SVLSVCGRMVAFVQGEQIHAQTIKTGF-LSD-VIVGTSLINMYIKCASV 436
+S C ++ A ++ K+G+ SD V++G++LI+MY KC +V
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNV 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 13/177 (7%)
Query: 265 LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
SE E ++S++S+ + L Q+H + G + + + L+ K G
Sbjct: 38 FSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVP 97
Query: 325 GE--AQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMK 382
+ A+ + + + + W A+I G+A +E D EA+ ++ + +
Sbjct: 98 MDPYARRVIEPVQFRNPFLWTAVIRGYA--IEGKFD---------EAIAMYGCMRKEEIT 146
Query: 383 LDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
FTFS++L CG M G Q HAQT + V VG ++I+MY+KC S+ CA
Sbjct: 147 PVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCA 203
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM-LHTGSYPSMNTLA 176
K G + A+ FD MP R+VVA+ ++M GYVQN A +F +M + P TL
Sbjct: 295 KLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 354
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
I L A L L +H YI++ +G AL +YSKCG ++ A+ F+ I+ K
Sbjct: 355 IVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 414
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
++ W A I G + + +++ +++P++ T VL+ C
Sbjct: 415 SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 161/408 (39%), Gaps = 40/408 (9%)
Query: 61 LAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTG--NHEDXXXXXXXXXXXXK 118
L + T E S I +L C ++ D +HG ++KTG + + +
Sbjct: 2 LVFKSTMECSISSTIHVLGSC---KTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSR 58
Query: 119 CGNMEDARR---------AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
+ D R +F + W ++ + P+ A + ML G
Sbjct: 59 RPYLADFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVS 118
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
+L++ L AC+ L +K G Q+H ++ K + D + N L LY KCG L + +
Sbjct: 119 VDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQM 178
Query: 230 FKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
F R+ +++ +S+ + I G K GL + L + M L S S
Sbjct: 179 FDRMPKRDSVSYNSMI-----DGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT 233
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGH 349
G + S E +L NS++ Y+K G I +A+ LF M +VTW MI G+
Sbjct: 234 SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGY 293
Query: 350 AK---------MMEQSRDNLYACWNG-----------TEALNLFSKLNCSGMKL-DLFTF 388
AK + +Q +N EAL +FS + L D T
Sbjct: 294 AKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTL 353
Query: 389 SSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
VL ++ + +H ++ F +G +LI+MY KC S+
Sbjct: 354 VIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 150/361 (41%), Gaps = 67/361 (18%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+HG + KTG D KCG + +R+ FD MP+R+ V++ +++ GYV+
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 153 PKHAFHVFD----EMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTS 208
A +FD EM + S+ SM I+ A TS G + + + + D
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSM----ISGYAQTS-----DGVDIASKLFADMPEKDLI 253
Query: 209 VGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSG---KAK---------- 255
N++ Y K GR+E A F + ++V++W I G AK
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRD 313
Query: 256 ------------------KGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+ L IF +M E ++ P++ TL VL ++ L +H
Sbjct: 314 VVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMH 373
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQS 356
+ + ++ +L+ +Y K G I A ++F+G+++ S+ WNAMI G A
Sbjct: 374 LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLA------ 427
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGF 416
++ G A ++ ++ +K D TF VL+ C H+ +K G
Sbjct: 428 ---IHGL--GESAFDMLLQIERLSLKPDDITFVGVLNACS-----------HSGLVKEGL 471
Query: 417 L 417
L
Sbjct: 472 L 472
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 157/347 (45%), Gaps = 46/347 (13%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRN 136
+L+ C + D + +H +K G + G +E A++AFD + +N
Sbjct: 110 VLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKN 169
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEM---------LHTGSYPSMNTLAIALNACT--SL 185
V+W +L+ GY+++ A VFD++ L SY + NAC+ S
Sbjct: 170 TVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMG---NACSLFSA 226
Query: 186 KSLKSGEQLHAYIIKY---------HIDFDTSVGN------ALCSLYSKCGRLEFALKAF 230
LKS + I Y FD + S Y+K G ++ A + F
Sbjct: 227 MPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 231 KRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSEN--MQPNEYTLTSVLSQCCEIQF 288
+ + +K+ + + A I+ +GK K L++F +ML N +QP+E TL+SV+S ++
Sbjct: 287 RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGN 346
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
GT V S T+ G + + + SL+ LY+K G +A +F ++ V+++AMI G
Sbjct: 347 TSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMG 406
Query: 349 HAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLS 393
NG TEA +LF+ + + ++ TF+ +LS
Sbjct: 407 CGI-------------NGMATEANSLFTAMIEKKIPPNVVTFTGLLS 440
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 148/321 (46%), Gaps = 40/321 (12%)
Query: 139 AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYI 198
+W L+ Q+ + K V+ +M ++G PS + + L AC ++++ G+ +HA
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 199 IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGL 258
+K + V L LYS+ G +E A KAF I EKN +SW + + +SG+ +
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 259 RIFVEM-----LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
R+F ++ +S N+ + Y + C + +M K N+
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSL--------FSAMPLKSPASWNI----- 237
Query: 314 LLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMME-QSRDNLY----------- 361
L+ Y+ + A+ F M + V+W MI+G+ K+ + QS + L+
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 362 ----ACW--NG--TEALNLFSKL--NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQT 411
AC+ NG +AL LF+++ S ++ D T SSV+S ++ G + +
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 412 IKTGFLSDVIVGTSLINMYIK 432
+ G D ++ TSLI++Y+K
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMK 378
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 62/125 (49%)
Query: 225 FALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCC 284
+ + K + SW + K K+ + ++++M + + P+ + +TSVL C
Sbjct: 56 YVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACG 115
Query: 285 EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNA 344
+++ + G +H+ K G + V+ L+ LY + G I A+ F + + + V+WN+
Sbjct: 116 KMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNS 175
Query: 345 MIAGH 349
++ G+
Sbjct: 176 LLHGY 180
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 21/257 (8%)
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLAIA 178
G+M+ A FD MPR+NV +WTT++ G+ QN A +F M S P+ T+
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI-KEKN 237
L AC +L L+ G +L Y + + V NA +YSKCG ++ A + F+ + ++N
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG----- 292
+ SW + I S GK + L +F +ML E +P+ T +L C + G
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 293 --TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA-- 347
+VH + KL + ++ L + G + EA L K M V W ++
Sbjct: 342 SMEEVHKISPKLEH------YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGAC 395
Query: 348 ---GHAKMMEQSRDNLY 361
G+ ++ E + + L+
Sbjct: 396 SFHGNVEIAEIASEALF 412
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 48/348 (13%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSR 152
+H H ++TG E N+ AR+ FDH + L+ Y + +
Sbjct: 7 LHAHCLRTGVDETKDLLQRLLLIP----NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQ 62
Query: 153 PKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDT----- 207
P + +++ + G PS +T A S S + LH+ + + D+
Sbjct: 63 PHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTT 122
Query: 208 --------------------------SVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
V NA+ + Y + G ++ A++ F + KNV SW
Sbjct: 123 LITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSW 182
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
T IS +G + L++F+ M + +++PN T+ SVL C + LE+G ++
Sbjct: 183 TTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAR 242
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM-DDASLVTWNAMIAGHAKMMEQSRDN 359
+ G+ N+ V N+ + +Y K G I A+ LF+ + + +L +WN+MI A +
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD--- 299
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
EAL LF+++ G K D TF +L C V+G+++
Sbjct: 300 --------EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQEL 339
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 27/270 (10%)
Query: 192 EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+QLHA+ ++ +D + L + + L +A K F + + I +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ + + ++ + + ++P+ +T + + +HS + G+ES+
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK------MME----QSRDNLY 361
+L+ Y K G + A+ +F M + WNAMI G+ + ME R N+
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 362 ACW-----------NGTEALNLFSKLNCS-GMKLDLFTFSSVLSVCGRMVAFVQGEQIHA 409
+ W N +EAL +F + +K + T SVL C + G ++
Sbjct: 181 S-WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 410 QTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+ GF ++ V + I MY KC + A
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVA 269
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 3/233 (1%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLH-TGSYPSMNTLA 176
K G A++ + +NV+ W ++ GYV+N + + A ML T P+ + A
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
+L AC L L + +H+ +I I+ + + +AL +Y+KCG + + + F +K
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+V W A I+ G A + +R+F EM +E++ P+ T +L+ C LE G +
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 297 S-MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIA 347
M + + L +++ L + G + EA L + M + +V W ++++
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 219 KCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS-ENMQPNEYTLT 277
K G A K + ++NVI+W I + + ++ L+ MLS +++PN+++
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 278 SVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA 337
S L+ C + L VHS+ G E N + ++L+ +Y K G IG ++ +F +
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 338 SLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
+ WNAMI G A TEA+ +FS++ + D TF +L+ C
Sbjct: 230 DVSIWNAMITGFATHGL-----------ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 278
Query: 398 MVAFVQGEQ 406
+G++
Sbjct: 279 CGLLEEGKE 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
N ++ +K G G A+ + + D +++TWN MI G+ + ++ EAL
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYE-----------EALK 150
Query: 372 -LFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMY 430
L + L+ + +K + F+F+S L+ C R+ + +H+ I +G + I+ ++L+++Y
Sbjct: 151 ALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVY 210
Query: 431 IKCASV 436
KC +
Sbjct: 211 AKCGDI 216
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 11/256 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY-PSMNTLA 176
+ G++ +A F+ MP R+V +W ++ QN A +F M++ S P+ T+
Sbjct: 205 RSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVV 264
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
L+AC +L+ + +HA+ + + D V N+L LY KCG LE A FK +K
Sbjct: 265 CVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKK 324
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSEN---MQPNEYTLTSVLSQCCEIQFLELGT 293
++ +W + I+ G++++ + +F EM+ N ++P+ T +L+ C + G
Sbjct: 325 SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR 384
Query: 294 QVHSMCT-KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD-DASLVTWNAM-----I 346
+ T + G E + L+ L + G EA + M A W ++ I
Sbjct: 385 GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI 444
Query: 347 AGHAKMMEQSRDNLYA 362
GH + E + NL A
Sbjct: 445 HGHLDLAEVAVKNLVA 460
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 142/316 (44%), Gaps = 54/316 (17%)
Query: 121 NMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFD--EMLHTGSYPSMNTL--A 176
N+ AR FD N + ++ Y +S P HA F ++ S P N
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYP 130
Query: 177 IALNACTSLKSLKSGEQLHAYIIK--YHI----------DFDTSVGN------------- 211
+ L + L S S +H ++ K +H+ + +SV +
Sbjct: 131 LVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE 190
Query: 212 -------ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEM 264
A+ S Y++ G + A+ F+ + E++V SW A +++C +G + + +F M
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 265 LSE-NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGC 323
++E +++PNE T+ VLS C + L+L +H+ + S++ V NSL+ LY K G
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 324 IGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGT-EALNLFS---KLNCS 379
+ EA +FK SL WN+MI N +A + EA+ +F KLN +
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMI------------NCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 380 GMKLDLFTFSSVLSVC 395
+K D TF +L+ C
Sbjct: 359 DIKPDHITFIGLLNAC 374
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 27/253 (10%)
Query: 213 LCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGK--AKKGLRIFVEMLSENM- 269
C+L + L +A F R N + A +++ S A F M++ ++
Sbjct: 65 FCTL--RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVP 122
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKR-GCIGEAQ 328
+PN + VL + VH+ K G+ + V+ +LL+ Y I A+
Sbjct: 123 RPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLAR 182
Query: 329 ILFKGMDDASLVTWNAMIAGHAK---------MMEQSRDNLYACWNGT-----------E 368
LF M + ++V+W AM++G+A+ + E + WN E
Sbjct: 183 QLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLE 242
Query: 369 ALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLI 427
A++LF ++ N ++ + T VLS C + + IHA + SDV V SL+
Sbjct: 243 AVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLV 302
Query: 428 NMYIKCASVVCAS 440
++Y KC ++ AS
Sbjct: 303 DLYGKCGNLEEAS 315
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 138/329 (41%), Gaps = 48/329 (14%)
Query: 120 GNMEDARRAFDHMPRRN-VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
G+++ A F P N ++W TL+ GY QN + A + M G ++
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAV 266
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA--------- 229
LN +SLKSLK G+++HA ++K + V + + +Y KCG +++A A
Sbjct: 267 LNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 230 ----------------------FKRIKEKNVISWTAAISSCGDSGKAKKGL---RIFVEM 264
F + EKN++ WTA + + L R F+
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA- 385
Query: 265 LSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCI 324
+E P+ + SVL C ++E G ++H + G + ++ + + +Y K G +
Sbjct: 386 -NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 325 GEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLD 384
A+ +F + V +NAMIAG A +++ + F + G K D
Sbjct: 445 EYAERIFDSSFERDTVMYNAMIAGCAHHGHEAK-----------SFQHFEDMTEGGFKPD 493
Query: 385 LFTFSSVLSVCGRMVAFVQGEQIHAQTIK 413
TF ++LS C ++GE+ I+
Sbjct: 494 EITFMALLSACRHRGLVLEGEKYFKSMIE 522
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 33 QNISLQKSHKFNTHLDPSRYRGFQE-----ALSLAKEGTEEVDSSFYIPLLQQCIDKRSF 87
+N L + +NT + G++E A+S+ + G + + SF +L +S
Sbjct: 218 RNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFG-AVLNVLSSLKSL 276
Query: 88 SDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNME------------------------ 123
+ VH ++K G++ + KCGNM+
Sbjct: 277 KIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGY 336
Query: 124 -------DARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEML-HTGSYPSMNTL 175
+A+R FD + +N+V WT + LGY+ +P + + + + P +
Sbjct: 337 SSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVM 396
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
L AC+ ++ G+++H + ++ I D + A +YSKCG +E+A + F E
Sbjct: 397 VSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFE 456
Query: 236 KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQC 283
++ + + A I+ C G K + F +M +P+E T ++LS C
Sbjct: 457 RDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC 504
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 159/421 (37%), Gaps = 113/421 (26%)
Query: 118 KCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
K G + +AR FD M RNV +W ++ YV+ + K A +F+ + NTL
Sbjct: 35 KSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLS 94
Query: 178 AL---NACTS---------------------------------LKSLKSGEQLHAYIIKY 201
+ C S L ++ GEQLH ++K
Sbjct: 95 GFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKT 154
Query: 202 HIDFDTSVGNALCSLYSKCGR------------LEF---------------------ALK 228
D ++L +YSKCG+ +EF AL
Sbjct: 155 GNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALS 214
Query: 229 AFKRIKEKN-VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQ 287
F R E N ISW I+ +G ++ L++ V M ++ +E++ +VL+ ++
Sbjct: 215 VFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLK 274
Query: 288 FLELGTQVHSMCTKLGYESNLRVRNSLLYLYLK--------------------------- 320
L++G +VH+ K G SN V + ++ +Y K
Sbjct: 275 SLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIV 334
Query: 321 ----RGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKL 376
+G + EA+ LF + + +LV W AM G+ + + L L
Sbjct: 335 GYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPD-----------SVLELARAF 383
Query: 377 NCSGMKL-DLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCAS 435
+ D SVL C G++IH +++TG L D + T+ ++MY KC +
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 436 V 436
V
Sbjct: 444 V 444
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 130/311 (41%), Gaps = 59/311 (18%)
Query: 185 LKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA 244
+K LK G H IK N L +LYSK G L A F + E+NV SW A
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 245 ISSCGDSGKAKKGLRIF-----------------------------VEMLSE-------N 268
I++ K+ +F +EM E +
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 269 MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
+ +++T+T+++ ++ + G Q+H + K G + +SL+++Y K G E
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 329 ILFKG--MDDASLVTWNAMIAGHAKMMEQSRD----------NLYACWNG---------- 366
+F G ++ V NAMIA + + + + N WN
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 367 -TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTS 425
EAL + + +G+K D +F +VL+V + + G+++HA+ +K G S+ V +
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 426 LINMYIKCASV 436
++++Y KC ++
Sbjct: 301 IVDVYCKCGNM 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Query: 66 TEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDA 125
T DS + +L C + + +HGH ++TG D KCGN+E A
Sbjct: 388 TNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 126 RRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL 185
R FD R+ V + ++ G + +F F++M G P T L+AC
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHR 507
Query: 186 KSLKSGEQLHAYIIK-YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK--EKNVISWT 242
+ GE+ +I+ Y+I +T + LY K RL+ A++ + I EK+ +
Sbjct: 508 GLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILG 567
Query: 243 AAISSC 248
A +++C
Sbjct: 568 AFLNAC 573
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 147/346 (42%), Gaps = 36/346 (10%)
Query: 77 LLQQCIDKRSFSDTQIVHGHIMKTG-NHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR 135
L+ +C +S + + +H I+ G +H C + A +P
Sbjct: 15 LISKC---KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC--LSYALSILRQIPNP 69
Query: 136 NVVAWTTLMLGYV--QNSRPKH-AFHVFDEMLHTGS---------YPSMNTLAIALNACT 183
+V + TL+ V NS H AF ++D++L + S YPS+ A +A
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFK-ASGFDA-- 126
Query: 184 SLKSLKSGEQLHAYIIKY--HIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+ + G LHA+++K+ ++ D V AL Y+ CG+L A F+RI+E ++ +W
Sbjct: 127 --QWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATW 184
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+++ +S + + + + ++PNE +L +++ C + G H K
Sbjct: 185 NTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLK 244
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
N V SL+ LY K GC+ A+ +F M + +NAMI G L
Sbjct: 245 NNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRG-----------LA 293
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
G E + L+ L G+ D TF +S C +G QI
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQI 339
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 21/274 (7%)
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
PS + LN + KSL++ +Q+HA II + T + L L S L +AL
Sbjct: 4 PSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSI 62
Query: 230 FKRIKEKNVISWTAAISSC---GDSGKAKKGLRIFVEMLSEN---MQPNEYTLTSVL-SQ 282
++I +V + ISS +S + ++ ++LS ++PNE+T S+ +
Sbjct: 63 LRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKAS 122
Query: 283 CCEIQFLELGTQVHSMCTKLGYESNLR--VRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
+ Q+ G +H+ K N V+ +L+ Y G + EA+ LF+ + + L
Sbjct: 123 GFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLA 182
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVA 400
TWN ++A +A E D E L LF ++ +L L +++ C +
Sbjct: 183 TWNTLLAAYANSEEIDSDE--------EVLLLFMRMQVRPNELSLV---ALIKSCANLGE 231
Query: 401 FVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCA 434
FV+G H +K + VGTSLI++Y KC
Sbjct: 232 FVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCG 265
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 17/279 (6%)
Query: 84 KRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP-RRNVVAWTT 142
K S D + +H + K G + G+++ AR+ FD P ++N+V WT
Sbjct: 78 KASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTA 137
Query: 143 LMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII--K 200
++ Y +N A +F M + +AL+AC L +++ GE++++ I K
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRK 197
Query: 201 YHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRI 260
+ D ++ N+L ++Y K G E A K F K+V ++T+ I +G+A++ L +
Sbjct: 198 RRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLEL 257
Query: 261 FVEMLSEN------MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS- 313
F +M + + + PN+ T VL C +E G + H + Y NL+ R +
Sbjct: 258 FKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDY--NLKPREAH 314
Query: 314 ---LLYLYLKRGCIGEAQILFKGMD-DASLVTWNAMIAG 348
++ L+ + G + +A M + V W ++
Sbjct: 315 FGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 175 LAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
AI +++ SL G Q+HA + K + + +L YS G +++A + F
Sbjct: 69 FAIKVSSAQKASSL-DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 235 EK-NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGT 293
EK N++ WTA IS+ ++ + + + +F M +E ++ + +T LS C ++ +++G
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 294 QVHSMCTKLGYE--SNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
+++S K +L +RNSLL +Y+K G +A+ LF + T+ +MI G+A
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA- 246
Query: 352 MMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDL------FTFSSVLSVC 395
NG E+L LF K+ D TF VL C
Sbjct: 247 ------------LNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMAC 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF-KGMDDASLVTWNAMIAGHA 350
G Q+H++ KLG+ + ++++ SL+ Y G + A+ +F + + ++V W AMI+ +
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 351 KMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQ 410
+ N EA+ LF ++ ++LD + LS C + A GE+I+++
Sbjct: 144 E-----------NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSR 192
Query: 411 TIKTG--FLSDVIVGTSLINMYIK 432
+IK D+ + SL+NMY+K
Sbjct: 193 SIKRKRRLAMDLTLRNSLLNMYVK 216
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 41/257 (15%)
Query: 68 EVDSSFYIPL--------LQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKC 119
++ SSF +PL L+ C VH H +K+ + KC
Sbjct: 37 QMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKC 96
Query: 120 GNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEM---------------- 163
++ AR+ FD +P+RN V W ++ Y + K A +++ M
Sbjct: 97 LSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGL 156
Query: 164 --LHTGSY---------------PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFD 206
GSY P++ TL ++AC+++ + + +++H+Y + I+
Sbjct: 157 VGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPH 216
Query: 207 TSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLS 266
+ + L Y +CG + + F +++++V++W++ IS+ G A+ L+ F EM
Sbjct: 217 PQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMEL 276
Query: 267 ENMQPNEYTLTSVLSQC 283
+ P++ +VL C
Sbjct: 277 AKVTPDDIAFLNVLKAC 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 45/293 (15%)
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP-SMNTLAIALNACTSLKSLKSGEQLH 195
+++ T + Y + A ++F +M + + P + ++AL +C + G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
A+ +K + + VG AL +Y KC + A K F I ++N + W A IS GK K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 256 ---------------------------------KGLRIFVEMLSENMQPNEYTLTSVLSQ 282
+ + + +M+ +PN TL +++S
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 283 CCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTW 342
C I L ++HS + E + ++++ L+ Y + G I Q++F M+D +V W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 343 NAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVC 395
+++I+ +A L+ + AL F ++ + + D F +VL C
Sbjct: 252 SSLISAYA---------LHG--DAESALKTFQEMELAKVTPDDIAFLNVLKAC 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 238 VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE-LGTQVH 296
+IS T +SS + G ++ L +F++M S P + + S+ + C F LG VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIA-----GHAK 351
+ K + SN V +LL +Y K + A+ LF + + V WNAMI+ G K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 352 MM------------EQSRDNLYACWNGTE-----ALNLFSKLNCSGMKLDLFTFSSVLSV 394
E S + + GTE A+ + K+ K +L T +++S
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 395 CGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVV 437
C + AF ++IH+ + + + L+ Y +C S+V
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIV 234
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 141/327 (43%), Gaps = 23/327 (7%)
Query: 118 KCGNMEDARRAFDHM----PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G +D +R F M R V + ++ + + A +F+EM G P
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T ++ + L + + D NAL + + K G+L L+ ++ +
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 234 K----EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
K + NV+S++ + + G ++ ++ +V+M + PNEYT TS++ C+I L
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA----SLVTWNAM 345
++ + ++G E N+ +L+ + EA+ LF MD A +L ++NA+
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 346 IAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE 405
I G K R AL L ++L G+K DL + + + + +
Sbjct: 479 IHGFVKAKNMDR-----------ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 406 QIHAQTIKTGFLSDVIVGTSLINMYIK 432
+ + + G ++ ++ T+L++ Y K
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFK 554
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 41/321 (12%)
Query: 118 KCGNMEDARRAFDHMPR----RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K GN+ DA R + M + NVV +T L+ G R K A +F +M G P++
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 174 TLAIALNACTSLKSLKSG----EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKA 229
+ ++ K++ +L IK + + LCSL ++E A
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSL----EKIEAAKVV 529
Query: 230 FKRIKE----KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCE 285
+KE N + +T + + SG +GL + EM +++ T ++ C+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 286 IQFLELGTQ-VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV---- 340
+ + + + G ++N + +++ K + A LF+ M LV
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 341 TWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSV---LSVCGR 397
+ +++ G+ K N EAL L K+ GMKLDL ++S+ LS C +
Sbjct: 650 AYTSLMDGNFKQ-----------GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 398 M---VAFVQ---GEQIHAQTI 412
+ +F++ GE IH +
Sbjct: 699 LQKARSFLEEMIGEGIHPDEV 719
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/313 (18%), Positives = 132/313 (42%), Gaps = 20/313 (6%)
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
+ NVV+++TL+ + + + A + +M G P+ T ++A + +L +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI----SWTAAISSCG 249
L +++ ++++ AL R++ A + F ++ VI S+ A I
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
+ + L + E+ ++P+ + + C ++ +E V + + G ++N
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
+ +L+ Y K G E L M + ++VT+ +I G K S+
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK-------- 595
Query: 366 GTEALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
A++ F+++ N G++ + F++++ + + Q ++ G + D T
Sbjct: 596 ---AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 425 SLINMYIKCASVV 437
SL++ K +V+
Sbjct: 653 SLMDGNFKQGNVL 665
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 128 AFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKS 187
D P NVV + TL+ G+ + AF +F M G P + + ++
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 188 LKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK----EKNVISWTA 243
L G +L + + + D V ++ +Y K G L A +KR+ NV+++T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 244 AISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLG 303
I G+ + ++ ++L M+P+ T +S++ C+ L G ++ K+G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 304 YESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIAGHAKMMEQSRDN 359
Y ++ + L+ K+G + A M S+ V +N++I G ++ N
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL------N 510
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ------GEQIHAQTIK 413
+ EAL +F + G+K D+ TF++V+ V AF + G Q+ +
Sbjct: 511 RF-----DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR 565
Query: 414 TGFLSDVIVGTSLINMYIKCASVVCAS 440
+D+ V +I++ KC + AS
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDAS 592
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
NVV +T L+ G Q+ R AF ++ ++L G PS+ T + ++ +L+SG L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCG----RLEFALKAFKRIKEKNVISWTAAISSCGDS 251
+IK D + L SK G + F++K + NV+ + + I
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVL------SQCCEIQFLELGTQVHSMCTKLGYE 305
+ + L++F M ++P+ T T+V+ C+ +G Q+ + +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILF----KGMDDASLVTWNAMIAGHAKM 352
+++ V N +++L K I +A F +G + +VT+N MI G+ +
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 130/308 (42%), Gaps = 27/308 (8%)
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA-------CTSLK 186
R NVV + +L+ G+ + +R A VF M G P + T + C +K
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI----KEKNVISWT 242
G QL + + I D +V N + L KC R+E A K F + E +++++
Sbjct: 553 P-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
I + + RIF + PN TLT ++ C+ ++ ++ S+ +
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRD 358
G + N L+ + K I + LF+ M + S+V+++ +I G K + R
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK---RGRV 728
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
+ EA N+F + + + D+ ++ ++ ++ V+ ++ ++ G
Sbjct: 729 D--------EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 419 DVIVGTSL 426
D ++ +L
Sbjct: 781 DDLLQRAL 788
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 23/267 (8%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+VV + +L+ G + R A + M YP + T ++AC + E+ +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKC--GRLEFALKAFKRIKEK----NVISWTAAISSCG 249
+I+ +D D + L +Y C RL+ A + F + K +V++++ I+
Sbjct: 280 EEMIRRSLDPDIVTYSLL--IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
S K + G+++F EM + N T T ++ C L + ++ G N+
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
N LL+ G I +A ++ M DA +VT+N +I G K E +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA--------- 448
Query: 366 GTEALNLFSKLNCSGMKLDLFTFSSVL 392
+A +++ LNC G+ D++T+++++
Sbjct: 449 --DAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 8/229 (3%)
Query: 120 GNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G + +A ++ M RR ++V ++ L+ G SR A +F M+ G +P + T
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI-- 233
+I +N K ++ G +L + + + +T L Y + G+L A + F+R+
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 234 --KEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
N+I++ + D+GK +K L I +M M + T ++ C+ +
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV 340
++ G ++ +++ K+G EA LF+ M + ++
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 25/269 (9%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+V + T LM G ++ RP+ A +F+ ++ G PS+ T + A T K S L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE----KNVISWTAAISSCGDS 251
+ + K + DT + NA+ + S+ G L+ A+K F+++KE ++ I G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 252 GKAKKGLRIFVEMLSENM-QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
GK ++ R+ ML + M QPN+ T ++ C + +E + G + ++
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 311 RNSLLYLYLKRG--CIGEAQILFKGMDD---ASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
N+L Y + G C E I+ + + + ++ T ++ G+ C
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGY-------------CEE 544
Query: 366 GT--EALNLFSKLNCSGMKLDLFTFSSVL 392
G EAL F ++ G+ +LF F+S++
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLI 573
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 23/312 (7%)
Query: 120 GNMEDARRAFDHMPRRNV----VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G+M +A + F M + + V +T L+ GY + K AF V + M+ G P++ T
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK- 234
++ L S +L + K + + N++ + K G +E A+K +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 235 ---EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ +++T + + SG+ K I EML + +QP T +++ C LE
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIA 347
G ++ + G N NSL+ Y R + A ++K M + T+ ++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 348 GHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
GH K N EA LF ++ G + + T+S ++ + F++ ++
Sbjct: 640 GHCKAR-----------NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 408 HAQTIKTGFLSD 419
Q + G +D
Sbjct: 689 FDQMRREGLAAD 700
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+VIS++ ++ G+ K ++ M + ++PN Y S++ C I L +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKM 352
S + G + V +L+ + KRG I A F M ++T+ A+I+G ++
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 353 MEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
+ EA LF ++ C G++ D TF+ +++ + ++H I
Sbjct: 400 GDM-----------VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 413 KTGFLSDVIVGTSLIN 428
+ G +V+ T+LI+
Sbjct: 449 QAGCSPNVVTYTTLID 464
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 23/312 (7%)
Query: 120 GNMEDARRAFDHMPRRNV----VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G+M +A + F M + + V +T L+ GY + K AF V + M+ G P++ T
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK- 234
++ L S +L + K + + N++ + K G +E A+K +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 235 ---EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ +++T + + SG+ K I EML + +QP T +++ C LE
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIA 347
G ++ + G N NSL+ Y R + A ++K M + T+ ++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 348 GHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
GH K N EA LF ++ G + + T+S ++ + F++ ++
Sbjct: 640 GHCKAR-----------NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 408 HAQTIKTGFLSD 419
Q + G +D
Sbjct: 689 FDQMRREGLAAD 700
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 237 NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVH 296
+VIS++ ++ G+ K ++ M + ++PN Y S++ C I L +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 297 SMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKM 352
S + G + V +L+ + KRG I A F M ++T+ A+I+G ++
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 353 MEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTI 412
+ EA LF ++ C G++ D TF+ +++ + ++H I
Sbjct: 400 GDM-----------VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 413 KTGFLSDVIVGTSLIN 428
+ G +V+ T+LI+
Sbjct: 449 QAGCSPNVVTYTTLID 464
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 64/129 (49%)
Query: 162 EMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCG 221
E+L G+ P + +C +LKSL+ +++H + ++ D + N + S++ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 222 RLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
+ A + F + +K++ SW + + D+G L +F EM ++PNE T +V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 282 QCCEIQFLE 290
C + +E
Sbjct: 346 ACATVGGIE 354
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 5/194 (2%)
Query: 53 RGFQEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXX 112
R +++A+ L +G D ++ L + C + +S ++ VH H +++ D
Sbjct: 219 RLYKDAIELLDKGAMP-DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 113 XXXXXKCGNMEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSM 172
+C ++ DA+R FDHM +++ +W +M Y N A H+F+EM G P+
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIK--YHIDFDTSVGNALCSLYSKCGRLEFALKAF 230
T AC ++ ++ LH +K + I T + + KCG L A +
Sbjct: 338 ETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 231 KRIK-EKNVISWTA 243
+ + E W A
Sbjct: 397 RDLPFEPTADFWEA 410
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 142/311 (45%), Gaps = 24/311 (7%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+V ++T+L+ + + R + A +VF +M G P++ T + LN + + ++
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT--PWNKIT 264
Query: 196 AYIIKYHIDF---DTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSC 248
+ + K D D N L + + + A + F+ +K + +++ A +
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
G S + K+ +++ EM+ P+ T S++S L+ ++ + + G + ++
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDA----SLVTWNAMIAGHAKMMEQSRDNLYACW 364
+LL + + G + A +F+ M +A ++ T+NA I M +R
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK-----MYGNRGKF---- 435
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
TE + +F ++N G+ D+ T++++L+V G+ + + + + GF+ +
Sbjct: 436 --TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 425 SLINMYIKCAS 435
+LI+ Y +C S
Sbjct: 494 TLISAYSRCGS 504
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/303 (17%), Positives = 127/303 (41%), Gaps = 19/303 (6%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
++V W TL+ + QN VF EM G P T ++A + S + ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE----KNVISWTAAISSCGDS 251
++ + D S N + + ++ G E + K +++ N +++ + + + +
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ + E+ S ++P L +++ C + L + S + G+ ++
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
NS++ +Y +R + +A + M + S+ T+N+++ H++ + +
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE-------- 684
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLI 427
+ ++ G+K D+ ++++V+ R +I ++ +G + DVI + I
Sbjct: 685 ---EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 428 NMY 430
Y
Sbjct: 742 GSY 744
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 154/369 (41%), Gaps = 29/369 (7%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y ++ + +R FS + V + K G + K G M DA + FD M
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 134 RR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
R +V +T+L+ + K AF +FDE+ G PS T ++ + +
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCG 249
+ E L + ++ V N L Y + G ++ A + +++K + A + +C
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK---GFQADVFTCN 438
Query: 250 DSGKAKKGLRIFVE-------MLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
L+ + E M+ ++ + + T+++ C+ +E ++ +
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHAKMMEQSRD 358
G + N N ++Y Y K+G I EA+ L M+ D T+ ++I G E D
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG-----ECIAD 553
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
N+ EA+ LFS++ G+ + T++ ++S + + ++ + + G+
Sbjct: 554 NV------DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 419 DVIVGTSLI 427
D V T+LI
Sbjct: 608 DNKVYTALI 616
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 115/246 (46%), Gaps = 12/246 (4%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + +A + +D M +R ++ +++L+ G+ + R A H+F+ M+ +P++
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T + K ++ G +L + + + +T N L + G + A K FK++
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
++I+++ + GK +K L +F + M+P+ YT ++ C+ +
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM-DDASLV---TWNAM 345
E G + + G + N+ + +++ + ++G EA LF+ M +D +L T+N +
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 346 IAGHAK 351
I +
Sbjct: 577 IRARLR 582
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 134/305 (43%), Gaps = 19/305 (6%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+VV +TT++ A ++F EM + G P++ T + + +L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF----KRIKEKNVISWTAAISSCGDS 251
+ +I+ I+ + +AL + K G+L A K + KR + ++ ++++ I+
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ + +F M+S++ PN T +++ C+ + +E G ++ ++ G N
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
N+L+ + G AQ +FK M ++T++ ++ G K + +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK---------- 483
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLI 427
AL +F L S M+ D++T++ ++ + G + G +VI+ T++I
Sbjct: 484 -ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 428 NMYIK 432
+ + +
Sbjct: 543 SGFCR 547
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 150/360 (41%), Gaps = 47/360 (13%)
Query: 93 VHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM----PRRNVVAWTTLMLGYV 148
V G +MK G D + +A D M + N V + TL+ G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 149 QNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN----------ACTSLKSLKSGEQLHAYI 198
+++ A + D M+ G P + T +N A + LK ++ G ++ A +
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADV 255
Query: 199 IKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSCGDSGKA 254
+ Y T++ +ALC+ + + AL F + K NV+++ + I + G+
Sbjct: 256 VIY-----TTIIDALCNYKN----VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 255 KKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSL 314
R+ +M+ + PN T ++++ + L +++ K + ++ +SL
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 315 LYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAG--HAKMMEQSRDNLYACWNGTE 368
+ + + EA+ +F+ M ++VT+N +I G AK +E E
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE-------------E 413
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
+ LF +++ G+ + T+++++ + ++I + + G D+I + L++
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 118/306 (38%), Gaps = 28/306 (9%)
Query: 60 SLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKC 119
+ KEG Y ++++ ID F+ + +++G M H+
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM----HD--------------- 374
Query: 120 GNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
+++A+ F+ M + NVV + TL+ G+ + R + +F EM G + T
Sbjct: 375 -RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK- 234
+ +++ ++ + D + L K G+LE AL F+ ++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 235 ---EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
E ++ ++ I +GK + G +F + + ++PN T+++S C E
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
+ + G N N+L+ L+ G + L K M V + I+
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Query: 352 MMEQSR 357
M+ R
Sbjct: 614 MLHDGR 619
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 211 NALCSLYSKCGRLEFALKAFKRIKE----KNVISWTAAISSCGDSG-KAKKGLRIFVEML 265
+AL S Y + G E A+ F +KE N++++ A I +CG G + K+ + F EM
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 266 SENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG 325
+QP+ T S+L+ C E + T E ++ N+LL K G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 326 EAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGM 381
A + M ++V+++ +I G AK EALNLF ++ G+
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAK-----------AGRFDEALNLFGEMRYLGI 440
Query: 382 KLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
LD +++++LS+ ++ + I + G DV+ +L+ Y K
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 14/255 (5%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
+ G E AR FD M R +V ++ TL+ + + AF + +M P++
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
+ + ++ L + I D N L S+Y+K GR E AL + +
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 234 K----EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+K+V+++ A + G GK + ++F EM E++ PN T ++++ +
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAM 345
+ ++ G +++ + ++L+ K G +G A L M ++VT+N++
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 346 IA--GHAKMMEQSRD 358
I G + M++S D
Sbjct: 591 IDAFGRSATMDRSAD 605
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 132/313 (42%), Gaps = 22/313 (7%)
Query: 137 VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNAC-TSLKSLKSGEQLH 195
V A++ L+ Y ++ + A VF+ M G P++ T ++AC K +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF-----KRIKEKNVISWTAAISSCGD 250
+ + + D N+L ++ S+ G E A F +RI E++V S+ + +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI-EQDVFSYNTLLDAICK 386
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
G+ I +M + + PN + ++V+ + + + LG +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIAGHAKMMEQSRDNLYACWNG 366
N+LL +Y K G EA + + M + VT+NA++ G+ K +
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD---------- 496
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSL 426
E +F+++ + +L T+S+++ + + + +I + G +DV++ ++L
Sbjct: 497 -EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 427 INMYIKCASVVCA 439
I+ K V A
Sbjct: 556 IDALCKNGLVGSA 568
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 142/333 (42%), Gaps = 32/333 (9%)
Query: 118 KCGNMEDARRAFDHMPRRNVVA----WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + +A A+ M + ++ +T LM G +N + A +F EM G P +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
+ + +N + L +++ + +++ + + + N L + + G +E A + +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
K N +++ I SG + R+F EM + + P+ + T+++ CC + +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIG-EAQILFKGMDDA-------SLVT 341
E + K G S+ N+L+ K G + ++L + MD + + VT
Sbjct: 749 ERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 342 WNAMIAGHAKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMV 399
+N MI Y C G A LF ++ + + + T++S+L+ +M
Sbjct: 808 YNIMID-------------YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 400 AFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
+ + + I G D I+ + +IN ++K
Sbjct: 855 RRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 129/328 (39%), Gaps = 17/328 (5%)
Query: 118 KCGNMEDARRAFDHMPRRNVV----AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G ME A+ FD M ++ A+ +L+ GY + + + + EM S
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T + S L + +I + + L + + R A++ K +
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI-QF 288
KE+ ++ + + I + + + VEM+ ++PN +T + +S E +F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG 348
V M + G N + L+ Y K+G + EA ++ M D I G
Sbjct: 539 ASADKYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG-------ILG 590
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
AK + L+ +A +F ++ G+ D+F++ +++ ++ + I
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 409 AQTIKTGFLSDVIVGTSLINMYIKCASV 436
+ ++ G +VI+ L+ + + +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 140/324 (43%), Gaps = 24/324 (7%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G ++A M R NVV++ +MLG+ + A VF +L G P+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR- 232
T +I ++ C ++ ++ ++ +I+ + V + + K G+ A +
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 233 IKEKNV----ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF 288
I+EK + +S+ + I G+ + + EM + PN T TS+++ C+
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNA 344
++ ++ G + ++ +L+ + KR + A LF + + L +N+
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 345 MIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQG 404
+I+G + N AL+L+ K+ G++ DL T+++++ + +
Sbjct: 695 LISGFRNL-----------GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 405 EQIHAQTIKTGFLSDVIVGTSLIN 428
+++ + G + D I+ T ++N
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVN 767
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 114/253 (45%), Gaps = 14/253 (5%)
Query: 118 KCGNMEDARRAFDHM----PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G M+ A A++ M NV+ +T+LM G +N+R A + DEM + G +
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
++ +++S L + +++ ++ + N+L S + G + AL +K++
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEI-QF 288
+ ++ ++T I G ++ EM + + P+E T +++ + QF
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNA 344
+++ M K N+ + N+++ + + G + EA L M D ++ T++
Sbjct: 776 VKVVKMFEEM-KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 345 MIAGHAKMMEQSR 357
+++G ++ R
Sbjct: 835 LVSGQVGNLQPVR 847
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYP--- 170
+ GN+E A+R + M + +V+ +TTL+ G+V+N A V+DEML G P
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 171 SMNTLAIA-LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGN----ALCSLYSKCGRLEF 225
+ T A+ L S K+ + E++ + H D ++ N LC + + +EF
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEM---VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 226 ALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCE 285
K F+ + +++T I ++G+ K ++ EML + + P+ T ++ +
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 286 IQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEA 327
LE Q + K G N+ N+LLY K G I EA
Sbjct: 598 AGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V +TT++ GY++N + K A +++DEML YPS+ T + + L+ Q
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 198 IIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSCGDSGK 253
+ K + + NAL K G ++ A + +++E+ N S+T IS D K
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 254 AKKGLRIFVEMLSENMQPNEYTLTSVLS------QCCEIQFLE 290
++ ++++ EML + ++P+ YT ++ + E++FLE
Sbjct: 671 WEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLE 713
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 118/288 (40%), Gaps = 15/288 (5%)
Query: 76 PLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR 135
PL++ + F D V ++ G + G ++DAR M
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+VV++ TLM GY++ + A +FD++ +PS+ T ++ +L+ ++L
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAF-----KRIKEKNVISWTAAISS--C 248
+ I D L + K G L A + + K IK T A+
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSV-LSQCCEIQFLELGTQVHSMCTKLGYESN 307
GDS KA R+ EM++ + + T+ +V + C++ L + ++G +
Sbjct: 493 GDSDKA---FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 308 LRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAK 351
+++ YL+ G A+ L+ M S++T+ +I GHAK
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 129/323 (39%), Gaps = 28/323 (8%)
Query: 118 KCGNMEDARRAFDHMPRRNVV----AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G ME+ARR M R ++ L+ GY + A+ V DEML+ G YP+ +
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T I + A + +L + + D N L Y K G+ A F +
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 234 K----EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+ +++++ I +SG + R+ EM ++ + P+ T T+++ + L
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAG- 348
+ T+V+ + G + + Y Y R +GE ++ G D + M+A
Sbjct: 461 SMATEVYDEMLRKGIKPD-------GYAYTTRA-VGELRL---GDSDKAFRLHEEMVATD 509
Query: 349 -HAK---MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQG 404
HA + D L N +A+ K+ G+ D T+++V+ F
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 405 EQIHAQTIKTGFLSDVIVGTSLI 427
++ + ++ VI LI
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLI 592
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 153/376 (40%), Gaps = 25/376 (6%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
DS+ Y LL + K +T+ V + D + GN++ A F
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 130 DHMPRRNV----VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL 185
+ + + V +T L+ GY + A ++ +EML G + T L+
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISW 241
K L ++L + + + D+ L + K G L+ A++ F+++KEK +V+++
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ G G I+ +M+S+ + P + + +++ C L +V
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNAMIAGHAKMMEQSR 357
+ + + NS++ Y + G + + + M V ++N +I G + E+
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR--EE-- 634
Query: 358 DNLYACWNGTEALNLFSKL--NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTG 415
N ++A L K+ G+ D+FT++S+L R + E + + I+ G
Sbjct: 635 -------NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 416 FLSDVIVGTSLINMYI 431
D T +IN ++
Sbjct: 688 VNPDRSTYTCMINGFV 703
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 139/313 (44%), Gaps = 32/313 (10%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA-CTSLKSLKSGEQL 194
N + + + +G+V+ A+ V+ E+ +G ++ TL I +NA C K K G L
Sbjct: 204 NALIGSLVRIGWVE-----LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL 258
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN----VISWTAAISSCGD 250
+ + + + D N L S YS G +E A + + K V ++ I+
Sbjct: 259 -SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK 317
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
GK ++ +F EML + P+ T S+L + C+ + +V S +L
Sbjct: 318 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIAGHAKMMEQSRDNLYACWNG 366
+S++ L+ + G + +A + F + +A L V + +I G+ C G
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY-------------CRKG 424
Query: 367 --TEALNLFSKLNCSGMKLDLFTFSSVL-SVCGRMVAFVQGEQIHAQTIKTGFLSDVIVG 423
+ A+NL +++ G +D+ T++++L +C R + + +++ + + D
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM-LGEADKLFNEMTERALFPDSYTL 483
Query: 424 TSLINMYIKCASV 436
T LI+ + K ++
Sbjct: 484 TILIDGHCKLGNL 496
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNV----VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + +A M +R + V +T+L+ G+ + ++ A H+ D M+ G P++
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T I +N + G +L + + DT N L + + G+LE A + F+ +
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+ +++S+ + D+G+ +K L IF ++ M+ + ++ C +
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAM 345
+ + G + +++ N ++ K+G + EA +LF+ M++ + T+N +
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 346 IAGH 349
I H
Sbjct: 569 IRAH 572
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 130/329 (39%), Gaps = 37/329 (11%)
Query: 123 EDARRAFDHM----PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
+DA F M PR ++ ++ L + + + +M G ++ TL+I
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE--- 235
+N C + L IIK + DT + L + GR+ AL+ R+ E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 236 -KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCE----IQFLE 290
+I+ A ++ +GK + + M+ QPNE T VL C+ +E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYL-KRGCIGEAQILFKGMD----DASLVTWNAM 345
L ++ KL V+ S++ L K G + A LF M+ A ++ + +
Sbjct: 234 LLRKMEERKIKLDA-----VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 346 IAGHAKMMEQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQ 403
I G C+ G + L + + D+ FS+++ + +
Sbjct: 289 IRGF-------------CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 404 GEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
E++H + I+ G D + TSLI+ + K
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 121/281 (43%), Gaps = 23/281 (8%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
ME R+ + + + V ++ ++ G ++ +AF++F+EM G + +
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV--- 238
G +L +IK I D +AL + K G+L A + K + ++ +
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 239 -ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+++T+ I + K + M+S+ PN T +++ C+ ++ G ++
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMM 353
+ G ++ N+L+ + + G + A+ LF+ M +V++ ++ G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG----- 466
Query: 354 EQSRDNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVL 392
C NG +AL +F K+ S M+LD+ ++ ++
Sbjct: 467 --------LCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 148/372 (39%), Gaps = 58/372 (15%)
Query: 95 GHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP----RRNVVAWTTLMLGYVQN 150
G +MK G D +EDA FD + + NVV +TTL+ +N
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 151 SRPKHAFHVFDEMLHTGSYPSM---NTLAIAL---------------------------- 179
HA +F++M GS P++ N L L
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 180 ----NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+A + L ++L+ +I+ + D +L + G L+ A + F ++
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 236 K----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
N + +T I S + + G++IF EM + + N T T ++ C + ++
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIA 347
+V + + ++R N LL G + +A ++F+ M D ++VT+ +I
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 348 GHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
G K+ + +A +LF L GMK ++ T+++++S R + + +
Sbjct: 442 GMCKLGKVE-----------DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 408 HAQTIKTGFLSD 419
+ + GFL +
Sbjct: 491 FKKMKEDGFLPN 502
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Query: 118 KCGNMEDARRAFDHMPRRNVVA----WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K +ED + F M ++ VVA +T L+ GY RP A VF++M + P +
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T + L+ ++ + Y+ K +D + + K G++E A F +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNE 273
K NVI++T IS G + +F +M + PNE
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 151/369 (40%), Gaps = 67/369 (18%)
Query: 85 RSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNVVAWTTLM 144
R F+ I +G++M K G ++ A+ F +P+ +V + TL+
Sbjct: 316 RGFAPDDITYGYLMNG---------------LCKIGRVDAAKDLFYRIPKPEIVIFNTLI 360
Query: 145 LGYVQNSRPKHAFHVFDEMLHT-GSYPSMNT-------------LAIALNACTSLKSLKS 190
G+V + R A V +M+ + G P + T + +AL +++
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 191 GEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK----EKNVISWTAAIS 246
+++Y I L + K G+++ A + + N + + IS
Sbjct: 421 KPNVYSYTI-------------LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
+ + + + IF EM + +P+ YT S++S CE+ ++ + G +
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 307 NLRVRNSLLYLYLKRGCIGEA-----QILFKG--MDDASLVTWNAMIAGHAKMMEQSRDN 359
N N+L+ +L+RG I EA +++F+G +D+ +T+N++I G + E +
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE---ITYNSLIKGLCRAGEVDK-- 582
Query: 360 LYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSD 419
A +LF K+ G + + +++ R + + + + G D
Sbjct: 583 ---------ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 420 VIVGTSLIN 428
++ SLIN
Sbjct: 634 IVTFNSLIN 642
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 149/395 (37%), Gaps = 62/395 (15%)
Query: 56 QEALSLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXX 115
+E K G + D YI LL + D R + + K G+ D
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 116 XXKCGNMEDARRAFDHMPRRNVV----AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPS 171
K GN +A D M + ++ + TL+ G ++ R A +F M G P+
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 172 MNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFK 231
AY ID+ Y K G AL+ F+
Sbjct: 433 ------------------------AYTYIVFIDY-----------YGKSGDSVSALETFE 457
Query: 232 RIKEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQ 287
++K K N+++ A++ S +G+ ++ +IF + + P+ T ++ ++
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 288 FLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWN 343
++ ++ S + G E ++ V NSL+ K + EA +F M + L VT+N
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 344 AMIAGHAKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAF 401
++AG K NG EA+ LF + G + TF+++ +
Sbjct: 578 TLLAGLGK-------------NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 402 VQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
++ + + G + DV ++I +K V
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 117/273 (42%), Gaps = 19/273 (6%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G+ A F+ M + N+VA + + R + A +F + G P
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T + + + + + +L + +++ + D V N+L + K R++ A K F R+
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 234 KE----KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
KE V+++ ++ G +GK ++ + +F M+ + PN T ++ C+ +
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD---ASLVTWNAMI 346
L ++ +G ++ N++++ +K G + EA F M VT ++
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Query: 347 AG--HAKMMEQS----RDNLYACWNGTEALNLF 373
G A ++E + + LY C + + NLF
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCAD--QPANLF 715
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Query: 118 KCGNMEDARRAF-DHMPRRN----VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSM 172
K GN++DA + D M R+ + L+ G ++ R A +F+ ML G P+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
I +N + L ++K + D + L GR++ L FK
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 233 IKEK----NVISWTAAISSCGDSGKAKKGLRIFVEM-LSENMQPNEYTLTSVLSQCCEIQ 287
+KE +V+ + I+ G S + ++ L +F EM S + P+ YT S++
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 288 FLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
+E ++++ + G E N+ N+L+ Y G A +++ M
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 142/346 (41%), Gaps = 59/346 (17%)
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
R V + T LM ++ RP A VF + TG PS+ + L A T K S +
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE----KNVISWTAAISSCGD 250
+ + + D+ NA+ + +S+ G +E A++A ++KE ++ I G
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 251 SGKAKKGLRIFVEMLSE---NMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESN 307
+GK ++ + ML E ++ PN T ++ C+ + +E +V + G +
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 308 LRVRNSLLYLYLKRG--CIGEAQILFK-----------------------------GMD- 335
N++ Y+++G E++++ K G+
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 336 ---------DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLF 386
+A+LV +N++I G ++M+ RD + E L L + N +K D+
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMD--RDGI------DEVLTLMKECN---VKADVI 331
Query: 387 TFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
T+S+V++ + Q+ + +K G D + L Y++
Sbjct: 332 TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 148/362 (40%), Gaps = 46/362 (12%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y LL ++ + + + ++G D + GNMEDA +A M
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 134 R----RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY---PSMNTLAIALNACTSLK 186
+ TL+ GY +P+ + + D ML G+ P++ T + + A K
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAIS 246
++ ++ + + + DT N + + Y + G ++A + EK V+ A +
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE---TVRAESEVVEKMVMKEKAKPN 259
Query: 247 --SCG-------DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHS 297
+CG G+ + GLR M ++ N S+++ E+ + +V +
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT 319
Query: 298 MCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNAMIAGHAKMM 353
+ + ++++ ++++ + G + +A +FK M A + ++ + G+ +
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 354 E-------------QSRDNLYA--------CWNGT--EALNLFSKLNCSGMKLDLFTFSS 390
E +SR N+ C NG+ +A+ +F+K+ G+ ++ TF +
Sbjct: 380 EPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 391 VL 392
++
Sbjct: 440 LM 441
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 134/312 (42%), Gaps = 26/312 (8%)
Query: 118 KCGNMEDARRAFDHMPRRNV----VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + DA FD M R V V + +L+ G + R A + +M+ P++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T ++ +L+ + + +D D N+L + GR++ A + +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
K +V+++ I+ S + +G ++F EM + + T +++ +
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAM 345
+ ++ S ++ N+R + LLY + +A +LF+ M + + T+N +
Sbjct: 366 DAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 346 IAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGE 405
I G K+ N +A +LF L+C G+K D+ ++++++S R + + +
Sbjct: 423 IHGMCKI-----------GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 406 QIHAQTIKTGFL 417
++ + + G L
Sbjct: 472 LLYRKMQEDGLL 483
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 31/293 (10%)
Query: 129 FDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
F + P +VV ++L+ G+ Q +R A + +M G P + ++ + +
Sbjct: 133 FGYEP--DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAA 244
+L + + + D N+L + GR A + + + + NVI++TA
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
I GK + ++++ EM + P+ +T S+++ C ++ Q+ + G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNAMIAGHAKMME------ 354
++ N+L+ + K + E LF+ M LV T+N +I G+ +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 355 -----QSRDN-------LYAC---WNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
SR N LY W +AL LF + S ++LD+ T++ V+
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 60/268 (22%)
Query: 140 WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII 199
+TTL+ ++ + F VF +M ++G +++T ++ C
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGC----------------- 547
Query: 200 KYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV----ISWTAAISSCGDSGKAK 255
++ G++ A A+ ++ KNV + + A IS+CG SG
Sbjct: 548 ------------------ARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVD 589
Query: 256 KGLRIFVEMLSEN--MQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNS 313
+ + EM +E + P+ ++ +++ CC +E +V+ M K G V
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 314 LLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMI--AGHAKMMEQSRDNLYACWNGT 367
+ K G A ++K M + + V ++A+I AGHAKM++
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD------------- 696
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLSVC 395
EA + G++L ++SS++ C
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGAC 724
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 139/326 (42%), Gaps = 31/326 (9%)
Query: 84 KRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR----NVVA 139
+ SD + +++ G D K + DA F + R+ NVV
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 140 WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYII 199
+T L+ G +SR A + +M+ P++ T + L+A + ++L ++
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 200 KYHIDFD----TSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSCGDS 251
+ ID D +S+ N LC L+ R++ A + F + K +V+S+ I+ +
Sbjct: 288 RMSIDPDIVTYSSLINGLC-LHD---RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ + G+++F EM + N T +++ + ++ + S G ++
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 312 NSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHAKMMEQSRDNLYACWNGT 367
N LL G + +A ++F+ M D +VT+ +I G K +
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE----------- 452
Query: 368 EALNLFSKLNCSGMKLDLFTFSSVLS 393
EA +LF L+ G+K D+ T+++++S
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 14/238 (5%)
Query: 124 DARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIAL 179
DA R M ++ NV+ ++ L+ +V+N + A +F+EM+ P + T + +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 180 NACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK--- 236
N + Q+ ++ D N L + + K R+E +K F+ + ++
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 237 -NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQV 295
N +++ I +G K F +M + P+ +T +L C+ LE +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 296 HSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF-----KGMDDASLVTWNAMIAG 348
K + ++ +++ K G + EA LF KG+ +VT+ M++G
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL-KPDIVTYTTMMSG 479
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 115/282 (40%), Gaps = 50/282 (17%)
Query: 120 GNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G DA R M R +V ++ L+ +V+ + A ++DEM+ PS+ T
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ +N L +Q+ +++ H D N L + K R+E ++ F+ + +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 236 K----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ N +++ I +G IF EM+S+ + PN T ++L C+ LE
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE- 483
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
+ +++ YL+R + + ++ T+N MI G K
Sbjct: 484 -------------------KAMVVFEYLQRSKM-----------EPTIYTYNIMIEGMCK 513
Query: 352 MMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
+ + +LF L+ G+K D+ +++++S
Sbjct: 514 AGKVE-----------DGWDLFCNLSLKGVKPDVVAYNTMIS 544
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 148/332 (44%), Gaps = 18/332 (5%)
Query: 43 FNTHLDP-SRYRGFQEALSLAKE-GTEEVDSSF--YIPLLQQCIDKRSFSDTQIVHGHIM 98
+NT +D +Y+ +AL+L KE T+ + + Y L+ + +SD + ++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 99 KTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRRNV----VAWTTLMLGYVQNSRPK 154
+ + D K G + +A + +D M +R++ V +++L+ G+ + R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 155 HAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC 214
A +F+ M+ +P + T + K ++ G ++ + + + +T N L
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 215 SLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
+ G + A + FK + N++++ + +GK +K + +F + M+
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P YT ++ C+ +E G + + G + ++ N+++ + ++G EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 331 FKGM-DDASLVT---WNAMIAGHAKMMEQSRD 358
FK M +D +L +N +I A++ + R+
Sbjct: 559 FKEMKEDGTLPNSGCYNTLI--RARLRDGDRE 588
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 49/272 (18%)
Query: 127 RAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA-CTSL 185
+ FD P + A+ T++ V+ ++ AF + M G P++ +L + + A C +
Sbjct: 113 KDFDCDPSQK--AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKN----VISW 241
++ +G ++ + K D D+ L S + GR++ A K F + EK+ V+++
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
T+ I+ S + +R EM S+ ++PN +T +S++ C+ G + +M
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD-----GRSLQAM--- 282
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLY 361
L + + RGC ++VT+ +I G K EQ
Sbjct: 283 -----------ELFEMMMARGC------------RPNMVTYTTLITGLCK--EQKIQ--- 314
Query: 362 ACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
EA+ L ++N G+K D + V+S
Sbjct: 315 ------EAVELLDRMNLQGLKPDAGLYGKVIS 340
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 123/283 (43%), Gaps = 23/283 (8%)
Query: 123 EDARRAFDHMP----RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIA 178
+DA F M R NV+ +++L+ R A + +M+ P++ T
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 179 LNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK-- 236
++A L E+L+ +IK ID D ++L + + RL+ A F+ + K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 237 --NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQ 294
NV+++ I+ + + +G+ +F EM + N T T+++ + + +
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 295 VHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHA 350
V G N+ N+LL K G + +A ++F+ + + ++ T+N MI G
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 351 KMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLS 393
K + + +LF L+ G+K D+ +++++S
Sbjct: 517 KAGKVE-----------DGWDLFCSLSLKGVKPDVIIYNTMIS 548
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + +A + +D M +R ++ +++L+ G+ + R A H+F+ M+ +P++
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T +N K + G +L + + + +T L + + + A FK++
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
N++++ + +GK +K + +F + M+P YT ++ C+ +
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
E G + + G + ++ + N+++ + ++G EA LF+ M
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/314 (19%), Positives = 132/314 (42%), Gaps = 37/314 (11%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA---------CTSLK 186
++V ++L+ GY R A + D+M+ G P T ++ +L
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK----EKNVISWT 242
++ Y + V N LC K G ++ A +++ E NV+ ++
Sbjct: 214 DRMVQRGCQPNLVTYGV-----VVNGLC----KRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
I S L +F EM ++ ++PN T +S++S C + +++ S +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGM----DDASLVTWNAMIAGHAKMMEQSRD 358
N+ N+L+ ++K G + EA+ L+ M D + T++++I G M D
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC--MHDRLD 382
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
EA ++F + ++ T++++++ + +G ++ + + G +
Sbjct: 383 ---------EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 419 DVIVGTSLINMYIK 432
+ + T+LI+ + +
Sbjct: 434 NTVTYTTLIHGFFQ 447
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 134/323 (41%), Gaps = 23/323 (7%)
Query: 120 GNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
GN++ A FD M + NVV + TL+ GY + + F + M G P++ +
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFAL----KAFK 231
+ +N +K + + + D N L Y K G AL + +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+VI++T+ I S +G + + +M + PNE T T+++ + ++
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIA 347
+V G+ ++ N+L+ + G + +A + + M + L V+++ +++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 348 GHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQI 407
G + ++ EAL + ++ G+K D T+SS++ + +
Sbjct: 459 GFCR-----------SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 408 HAQTIKTGFLSDVIVGTSLINMY 430
+ + ++ G D T+LIN Y
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAY 530
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 163/385 (42%), Gaps = 36/385 (9%)
Query: 69 VDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRA 128
+D Y L++ + +F ++H +++ G K GNM A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 129 FDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN---- 180
D M R N +TTL+ G+ Q A+ V EM G PS+ T +N
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 181 ------ACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK 234
A L+ +K + L ++ Y ++V + C Y ++ AL+ + +
Sbjct: 428 TGKMEDAIAVLEDMKE-KGLSPDVVSY-----STVLSGFCRSYD----VDEALRVKREMV 477
Query: 235 EKNV----ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLE 290
EK + I++++ I + + K+ ++ EML + P+E+T T++++ C LE
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 291 LGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ-ILFKGMDDASL---VTWNAMI 346
Q+H+ + G ++ + L+ K+ EA+ +L K + S+ VT++ +I
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 347 AGHAKMMEQSRDNLYA--CWNG--TEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFV 402
+ + +S +L C G TEA +F + K D ++ ++ R
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 403 QGEQIHAQTIKTGFLSDVIVGTSLI 427
+ ++ + +K+GFL + +L+
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALV 682
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 129/304 (42%), Gaps = 21/304 (6%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
N V+++TL+ YV+N + A VF EM + T I ++ L +K ++L
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK----EKNVISWTAAISSCGDS 251
+ K I+ + N + +Y + A+ F+ ++ E+NV+++ I G +
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 252 GKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ +K + EM S ++PN T ++++S + L+ + G E + +
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 312 NSLLYLYLKRGCIGEAQILFKGM---DDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
+++ Y + G +G A+ L + D+ T ++A + E A W
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEE-------ATW---- 522
Query: 369 ALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
+F + SG D+ F ++++ R +V ++ + G+ D V ++N
Sbjct: 523 ---VFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLN 579
Query: 429 MYIK 432
Y K
Sbjct: 580 AYGK 583
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 217 YSKCGRLEFALKAFKRIKE----KNVISWTAAISSCGDSGKA-KKGLRIFVEMLSENMQP 271
YS+ G+ E A+ F+R+KE ++++ + G G++ +K L + EM S+ ++
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+E+T ++VLS C L + + GYE N+LL ++ K G EA +
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 332 KGMDD----ASLVTWNAMIAGHAK------------MMEQSR------------DNLYAC 363
K M++ A VT+N ++A + + MM + D
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 364 WNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
EAL LF + +G + T+++VLS+ G+
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 136/335 (40%), Gaps = 48/335 (14%)
Query: 138 VAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAY 197
V + L+ YV+ K A V + M G P+ T ++A K+G++ A
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYG-----KAGKEDEAL 406
Query: 198 IIKYHIDF-----DTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSC 248
+ Y + +T NA+ SL K R +K +K N +W ++ C
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
G+ G K R+F EM S +P+ T +++S ++++ T+ G+ + +
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 526
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIAGHAKM-----MEQSRD- 358
N+LL ++G + + M +++ M+ +AK +E+ +
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 359 ----NLYACW----------------NGTE-ALNLFSKLNCSGMKLDLFTFSSVLSVCGR 397
++ W G+E A LF K G K D+ F+S+LS+ R
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTR 643
Query: 398 MVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIK 432
+ Q E I + G D++ SL++MY++
Sbjct: 644 NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 145/370 (39%), Gaps = 52/370 (14%)
Query: 75 IPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHM-- 132
IPL + +D R++ T I+H + + G E A F+ M
Sbjct: 201 IPLQEYLLDVRAY--TTILHAY--------------------SRTGKYEKAIDLFERMKE 238
Query: 133 --PRRNVVAWTTLMLGYVQNSRP-KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLK 189
P +V + ++ + + R + V DEM G T + L+AC L+
Sbjct: 239 MGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLR 298
Query: 190 SGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAI 245
++ A + + T NAL ++ K G AL K ++E + +++ +
Sbjct: 299 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 246 SSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYE 305
++ +G +K+ + M + + PN T T+V+ + + ++ + G
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 306 SNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHAKMMEQSRDNLY 361
N N++L L K+ E + M + TWN M+A
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-------------- 464
Query: 362 ACWN-GTEAL--NLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
C N G + +F ++ G + D TF++++S GR + V +++ + + GF +
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 419 DVIVGTSLIN 428
V +L+N
Sbjct: 525 CVTTYNALLN 534
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 127/330 (38%), Gaps = 66/330 (20%)
Query: 76 PLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP-- 133
PL+ + + +D + V+ +++ + K G M AR + M
Sbjct: 193 PLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 134 --RRNVVAWTTLMLGYVQ---NSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSL 188
NVV++ TL+ GY + N + A V EM+ P++ T I ++
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG------- 305
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAA 244
+ K L ++K FK + ++ NVIS+ +
Sbjct: 306 ----------------------------FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
I+ + GK + + + +M+S +QPN T ++++ C+ L+ + G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNAMIAGHAKMMEQSRDNL 360
R+ N L+ Y K G I + L + M+ +V T+N +IAG
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG------------ 445
Query: 361 YACWNGT--EALNLFSKLNCSGMKLDLFTF 388
C NG A LF +L G+ DL TF
Sbjct: 446 -LCRNGNIEAAKKLFDQLTSKGLP-DLVTF 473
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 43/260 (16%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
NVV +T L+ G Q+ R AF ++ ++L G PS+ T + ++ +L+SG L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 196 AYIIKY-----------------------------------HIDFDTSVGNALCSLYSKC 220
+IK I + V N+L + +
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 221 GRLEFALKAFKRIK----EKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTL 276
R + ALK F+ + + +V ++T + G+ ++ L +F M ++P+
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 277 TSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF----K 332
+++ C+ +G Q+ + + +++ V N +++L K I +A F +
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 333 GMDDASLVTWNAMIAGHAKM 352
G + +VT+N MI G+ +
Sbjct: 630 GKMEPDIVTYNTMICGYCSL 649
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 128/302 (42%), Gaps = 21/302 (6%)
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA-CTSLKSLKSGE 192
+ +V +TT+M + R + A +F M G P ++A C +K G
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP-TIGL 586
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI----KEKNVISWTAAISSC 248
QL + + I D +V N + L KC R+E A K F + E +++++ I
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
+ + RIF + PN TLT ++ C+ ++ ++ S+ + G + N
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNLYACW 364
L+ + K I + LF+ M + S+V+++ +I G K + R +
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK---RGRVD----- 758
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGT 424
EA N+F + + + D+ ++ ++ ++ V+ ++ ++ G D ++
Sbjct: 759 ---EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 815
Query: 425 SL 426
+L
Sbjct: 816 AL 817
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 151/365 (41%), Gaps = 43/365 (11%)
Query: 57 EALSLAKEGTE---EVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXX 113
EAL+L KE E + + Y L+ + F + + G +++ G +
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 114 XXXXKCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSY 169
K G +EDA + M R N + L+ GY +++ K A V ++ML
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVL 459
Query: 170 PSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFD----TSVGNALCSLYSKCGRLEF 225
P + T ++ + S +L + + + D TS+ ++LC K R+E
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC----KSKRVEE 515
Query: 226 ALKAFKRIKEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLS 281
A F +++K NV+ +TA I +GK + + +MLS+N PN T +++
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 282 QCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM------D 335
C L+ T + K+G + + L++ LK G A F+ M
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 336 DASLVTWNAMIAGHAKMMEQSRDNLYACWNGT--EALNLFSKLNCSGMKLDLFTFSSVLS 393
DA T+ I + C G +A ++ +K+ +G+ DLFT+SS++
Sbjct: 636 DAH--TYTTFIQTY-------------CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 394 VCGRM 398
G +
Sbjct: 681 GYGDL 685
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 139/354 (39%), Gaps = 70/354 (19%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K GN+E+A + + + +T+L++GY Q AF VF+EM
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM---------- 279
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
LK + E + ++I + LC R++ A+ F ++
Sbjct: 280 ----------PLKGCRRNEVAYTHLI-----------HGLCV----ARRIDEAMDLFVKM 314
Query: 234 KEKN----VISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
K+ V ++T I S S + + L + EM ++PN +T T ++ C
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNAM 345
E ++ + G N+ N+L+ Y KRG I +A + + M+ L T+N +
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 346 IAGHA------------KMMEQSR-----------DNLYACWNGTEALNLFSKLNCSGMK 382
I G+ KM+E+ D N A L S +N G+
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 383 LDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASV 436
D +T++S++ + + + + G +V++ T+LI+ Y K V
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 14/238 (5%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
NV + L+ +N++ A + EM + G P + +++ + +K G +L
Sbjct: 180 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL- 238
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
A + + ++ N LC + G E + ++ NVIS++ I+ +SG+ +
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQC----CEIQFLELGTQVHSMCTKLGYESNLRVR 311
+ML PN YTL+S++ C L+L Q M G + N+
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ---MIRGFGLQPNVVAY 355
Query: 312 NSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNLYACWN 365
N+L+ + G I +A +F M++ ++ T+ ++I G AK S D WN
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK--RGSLDGAVYIWN 411
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 25/286 (8%)
Query: 120 GNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G +D + M +R NVV ++ L+ +V+ + + A + EM+H G P T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
++ L Q+ ++ D + N L + Y K R++ L+ F+++
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 236 KNV----ISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ V +++ I + GK +F EM+S + PN T +L C+ E
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF-----KGMDDASLVTWNAMI 346
++ K E ++ + N +++ + +A LF KG+ + T+N MI
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV-KPGVKTYNIMI 550
Query: 347 AGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
G K S EA LF K+ G D +T++ ++
Sbjct: 551 GGLCKKGPLS-----------EAELLFRKMEEDGHAPDGWTYNILI 585
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 63/301 (20%)
Query: 122 MEDARRAFDHMPRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA 181
ME R+ + + + V ++ ++ G ++ +AF++F+EM G ++ T I +
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 182 CTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISW 241
+ G +L +IK I+ NV+++
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKIN-------------------------------PNVVTF 336
Query: 242 TAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTK 301
+ I S GK ++ + EM+ + P+ T TS++ C+ L+ Q+ +
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 302 LGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGH-------- 349
G + N+R N L+ Y K I + LF+ M A VT+N +I G
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 350 AKMMEQ---SR-------------DNLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSV 391
AK + Q SR D L C NG +AL +F K+ S M+LD+ ++ +
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGL--CDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 392 L 392
+
Sbjct: 515 I 515
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 137/320 (42%), Gaps = 25/320 (7%)
Query: 122 MEDARRAFDHMP----RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAI 177
+ DA D M R + + +TTL+ G +++ A + D M+ G P++ T +
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 178 ALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK- 236
+N + L + I+ D + N + K ++ AL FK ++ K
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 237 ---NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCC-EIQFLELG 292
NV+++++ IS G+ ++ +M+ + + PN T +++ E +F+E
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE-A 274
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAG 348
++H K + ++ NSL+ + + +A+ +F+ M L T+N +I G
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
K +GTE LF +++ G+ D T+++++ +++
Sbjct: 335 FCKSKRVE--------DGTE---LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 409 AQTIKTGFLSDVIVGTSLIN 428
Q + G D++ + L++
Sbjct: 384 KQMVSDGVPPDIMTYSILLD 403
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 121/309 (39%), Gaps = 37/309 (11%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNA---------CTSLK 186
++V ++L+ GY R A + D+M+ G P T ++ +L
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK----EKNVISWT 242
++ Y + V N LC K G ++ A +++ E +V+ +
Sbjct: 139 DRMVQRGCQPNLVTYGV-----VVNGLC----KRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
I S L +F EM ++ ++PN T +S++S C +Q+ S +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGM----DDASLVTWNAMIAGHAKMMEQSRD 358
NL N+L+ ++K G EA+ L M D + T+N++I G M D
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC--MHDRLD 307
Query: 359 NLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLS 418
+A +F + DL T+++++ + G ++ + G +
Sbjct: 308 ---------KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 419 DVIVGTSLI 427
D + T+LI
Sbjct: 359 DTVTYTTLI 367
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 145/332 (43%), Gaps = 18/332 (5%)
Query: 43 FNTHLDP-SRYRGFQEALSLAKEGTEE---VDSSFYIPLLQQCIDKRSFSDTQIVHGHIM 98
+NT +D +Y+ +AL+L E + D Y L+ + +SD + ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 99 KTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPK 154
+ + + K G + +A + +D M +R ++ +++L+ G+ + R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 155 HAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALC 214
A H+F+ M+ +P++ T + + K ++ G +L + + + +T L
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 215 SLYSKCGRLEFALKAFKRIKE----KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQ 270
+ + + A FK++ N++++ + +GK K + +F + M+
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 271 PNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQIL 330
P+ YT ++ C+ +E G ++ + G N+ N+++ + ++G EA L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 331 FKGM-DDASLV---TWNAMIAGHAKMMEQSRD 358
K M +D L T+N +I A++ + R+
Sbjct: 561 LKKMKEDGPLPNSGTYNTLI--RARLRDGDRE 590
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 156 AFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKS----GEQLHAYIIKYHIDFDTSVGN 211
A +F +M+ + +PS+ L+A + + GEQ+ I + + + N
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 212 ALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQP 271
C L K K E ++++ ++ ++ S + + + +M+ +P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 272 NEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF 331
+ +T T+++ + + G + +L +++ KRG I A L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 332 KGMD----DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFT 387
K M+ +A +V +N +I G K +ALNLF++++ G++ D+FT
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMD-----------DALNLFTEMDNKGIRPDVFT 295
Query: 388 FSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCA 439
+SS++S + ++ + I+ +V+ ++LI+ ++K +V A
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 132/328 (40%), Gaps = 28/328 (8%)
Query: 80 QCIDKRS-FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP----R 134
C +RS S V +MK G D + DA D M +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQL 194
+ +TTL+ G +++ A + D+M+ G P + T +N + L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 195 HAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSCGD 250
+ K I+ D + N + K ++ AL F + K +V ++++ IS +
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
G+ R+ +M+ + PN T ++++ + L +++ K + ++
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAG--HAKMMEQSRDNLYACW 364
+SL+ + + EA+ +F+ M ++VT++ +I G AK +E
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE---------- 415
Query: 365 NGTEALNLFSKLNCSGMKLDLFTFSSVL 392
E + LF +++ G+ + T+++++
Sbjct: 416 ---EGMELFREMSQRGLVGNTVTYTTLI 440
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 128/310 (41%), Gaps = 46/310 (14%)
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
R +VV +T ++ Y Q + K A F EML G P A+A C
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPD----AVA---C----------- 226
Query: 194 LHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAA----ISSCG 249
G LC+ Y++ GR L +K ++E+ ++ T+ +SS
Sbjct: 227 ----------------GTMLCT-YARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQ 269
Query: 250 DSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLR 309
K + +++EM+ E + PNE+T T V+S + F E + LG+
Sbjct: 270 KKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEV 329
Query: 310 VRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEA 369
+S++ L +K G +A L++ M +V N A + Y N +A
Sbjct: 330 TYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSL-------YYKTENYPKA 382
Query: 370 LNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLINM 429
L+LF+ + + + D ++ + G++ F + + +T + L+D ++ +
Sbjct: 383 LSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQV 442
Query: 430 YIKCASVVCA 439
++ +VV A
Sbjct: 443 HLNSGNVVKA 452
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 64/335 (19%)
Query: 74 YIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP 133
Y L++ K+ F + + K G D K G ++DA FD M
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 134 RR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGS-YPSMNTLAIALNACTSLKSL 188
R +V + L+ G+++ K A ++D +L S YP++ T
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT-------------- 257
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIK----EKNVISWTAA 244
N + S SKCGR++ LK ++R+K EK++ ++++
Sbjct: 258 ---------------------HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
I D+G K +F E+ + T ++L C ++ ++ +
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHAKMMEQSRDNL 360
N+ N L+ L+ G I EA ++++ M A T+ I G
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG------------ 403
Query: 361 YACWNG--TEALNLFSKLNCSGMKLDLFTFSSVLS 393
C NG +AL + ++ SG LD++ ++S++
Sbjct: 404 -LCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 12/250 (4%)
Query: 120 GNMEDARRAFDHMPRRNVVA----WTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G +++A + MP + A + + G N A V E+ +G + +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLY---SKCGRLEFALKAF-K 231
A ++ K L+ L + K+ ++ ++ V NAL S+ G F L+ K
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 232 RIKEKNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
V+S+ I +GK + EML +P+ T + +L C + ++L
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIA 347
++ + G E+++ + N L++ G + +A + M+ A+LVT+N ++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 348 GHAKMMEQSR 357
G K+ + +R
Sbjct: 613 GFFKVGDSNR 622
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 12/246 (4%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + +A + FD M +R N+V + +L+ G+ + R A +F M+ P +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T +N K + G +L + + + +T L + + + A FK++
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
N++++ + +GK +K + +F + M+P+ YT + C+ +
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM-DDASLV---TWNAM 345
E G + + G + ++ N+++ + K+G EA LF M +D L T+N +
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 346 IAGHAK 351
I H +
Sbjct: 562 IRAHLR 567
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 106/246 (43%), Gaps = 12/246 (4%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G +++A + M R N++ + TLM GY +R A ++ D M+ P +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T + +K + G ++ I K + + + L + + G+++ A + F+ +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 234 KE----KNVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
+V+++ + D+GK +K L IF ++ M T+++ C+ +
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAM 345
E + G + N+ ++ K+G + EA IL + M++ + T+N +
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 346 IAGHAK 351
I H +
Sbjct: 550 IRAHLR 555
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 14/256 (5%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G D M R NV+ + L+ +V+ + + A ++ EM+ G P++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T ++ L + +++ D +L Y R++ +K F+ I
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
++ N ++++ + SGK K +F EM+S + P+ T +L C+ L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF-----KGMDDASLVTWNA 344
E ++ K + + + +++ K G + +A LF KG+ +++T+
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-KPNVMTYTV 513
Query: 345 MIAGHAKMMEQSRDNL 360
MI+G K S N+
Sbjct: 514 MISGLCKKGSLSEANI 529
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 166/404 (41%), Gaps = 29/404 (7%)
Query: 42 KFNTHLDP-SRYRGFQEALSLAK--EGTEEVDSSFYIPLLQQCIDKRS-FSDTQIVHGHI 97
+FN L ++ + F +SL + + E V + +L C +RS S + G +
Sbjct: 87 EFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 98 MKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP----RRNVVAWTTLMLGYVQNSRP 153
MK G + DA D M R + + +TTL+ G +++
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
A + D M+ G P++ T + +N L + I+ D + N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 214 CSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
K ++ AL FK ++ K NV+++++ IS G+ ++ +M+ + +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 270 QPNEYTLTSVLSQCC-EIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQ 328
PN T +++ E +F+E +++ K + ++ NSL+ + + +A+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVE-AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 329 ILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLD 384
+F+ M +VT+N +I G K +GTE LF +++ G+ D
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE--------DGTE---LFREMSHRGLVGD 434
Query: 385 LFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLIN 428
T+++++ +++ Q + G D++ + L++
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 120/306 (39%), Gaps = 28/306 (9%)
Query: 60 SLAKEGTEEVDSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKC 119
+ KEG Y ++++ ID F+ +V+G M H+
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM----HD--------------- 379
Query: 120 GNMEDARRAFDHMPRRN----VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
++ A++ F+ M ++ VV + TL+ G+ ++ R + +F EM H G T
Sbjct: 380 -RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ + +++ ++ + D + L G+LE AL+ F +++
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 236 K----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
++ +T I +GK G +F + + ++PN T +++S C + L+
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAK 351
+ + G N N+L+ +L+ G + L + M V + I A
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Query: 352 MMEQSR 357
M+ R
Sbjct: 619 MLHDGR 624
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 41/269 (15%)
Query: 134 RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQ 193
R NVV + +L+ R A + ML P++ T ++A L E+
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 194 LHAYIIKYHIDFDT-----------------------------------SVGNALCSLYS 218
LH +I+ ID DT N L + +
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 219 KCGRLEFALKAFKRIKEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEY 274
KC R+E ++ F+ + ++ N +++T I +G +F +M+S + +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 275 TLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGM 334
T + +L C L+ + K E N+ + N+++ K G +GEA LF +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 335 D-DASLVTWNAMIAGH-AKMMEQSRDNLY 361
+VT+N MI+G +K + Q D+L+
Sbjct: 530 SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 131/330 (39%), Gaps = 32/330 (9%)
Query: 80 QCIDKRS-FSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMP----R 134
C +RS S V +MK G D + DA D M +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 135 RNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSG--- 191
+ +TTL+ G +++ A + D+M+ G P + T +N +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 192 -EQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAIS 246
++ A IK ++ ++ ++LC K +E A+ F ++ K NV+++ + I+
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLC----KYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 247 SCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYES 306
+ G+ R+ ML + + PN T +++ + L ++H + +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 307 NLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNLYA 362
+ N L+ + + EA+ +FK M ++ T+N +I G K
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK----------- 410
Query: 363 CWNGTEALNLFSKLNCSGMKLDLFTFSSVL 392
C + + LF +++ G+ + T+++++
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 143/336 (42%), Gaps = 42/336 (12%)
Query: 86 SFSDTQIVHG---------------HIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAFD 130
+F+ T ++HG +++ G D K G+++ A +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 131 HMP----RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLK 186
M + NVV + T++ + + A +F EM G P++ T +N +
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 187 SLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNV----ISWT 242
+L + +++ I+ + NAL + K G+L A K + + ++++ I++
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 243 AAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKL 302
I+ + + ++F M+S++ PN T ++++ C+ + +E G ++ ++
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 303 GYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRD 358
G N +++ + + G AQ++FK M ++T++ ++ G
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG---------- 477
Query: 359 NLYACWNG--TEALNLFSKLNCSGMKLDLFTFSSVL 392
C G AL +F L S M+L++F +++++
Sbjct: 478 ---LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 127/305 (41%), Gaps = 13/305 (4%)
Query: 43 FNTHLDP-SRYRGFQEALSL-AKEGTEEV--DSSFYIPLLQQCIDKRSFSDTQIVHGHIM 98
+NT +D +Y+ +A L K T+ + D Y PL+ + +SD + ++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 99 KTGNHEDXXXXXXXXXXXXKCGNMEDARRAFDHMPRR-----NVVAWTTLMLGYVQNSRP 153
+ + D K G + +A + +D M + +VVA+ TL+ G+ + R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 154 KHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNAL 213
+ VF EM G + T ++ + + + + ++ + D N L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 214 CSLYSKCGRLEFALKAFKRIKEKN----VISWTAAISSCGDSGKAKKGLRIFVEMLSENM 269
G +E AL F+ +++++ ++++T I + +GK + G +F + + +
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 270 QPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQI 329
+PN T T+++S C E + + G N N+L+ L+ G +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 330 LFKGM 334
L K M
Sbjct: 553 LIKEM 557
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 113/267 (42%), Gaps = 20/267 (7%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+VV + T++ G + AF +F++M G P + T ++ + +L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR-IKEK----NVISWTAAISSCGD 250
+ +++ +I+ D NAL + K G+L A K + +K K +V+++ I
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 251 SGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRV 310
+ ++G+ +F EM + N T T+++ + + + V G ++
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 311 RNSLLYLYLKRGCIGEAQILFKGMDDASL----VTWNAMIAGHAKMMEQSRDNLYACWNG 366
N LL G + A ++F+ M + VT+ MI K +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE---------- 478
Query: 367 TEALNLFSKLNCSGMKLDLFTFSSVLS 393
+ +LF L+ G+K ++ T+++++S
Sbjct: 479 -DGWDLFCSLSLKGVKPNVVTYTTMMS 504
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 12/309 (3%)
Query: 133 PRRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGE 192
P R V+ + M + ++ + + +FDEML G P T ++ K
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAV 230
Query: 193 QLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAAISSC 248
+ + + + D A+ Y + G ++ AL + R + + + ++++ I
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 249 GDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNL 308
G SG L I+ EM + ++PN ++ + ++ G+ N
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 309 RVRNSLLYLYLKRGCIGEAQILFKGMDDASLVTWNAMIAGHAKMMEQSRDNLYACWNGTE 368
+L+ Y + +A +++ M + L + + + ++ DN Y E
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGL---SLTVILYNTLLSMCADNRYV----DE 403
Query: 369 ALNLFSKL-NCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDVIVGTSLI 427
A +F + NC D +TFSS+++V + E Q + GF + V TS+I
Sbjct: 404 AFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVI 463
Query: 428 NMYIKCASV 436
Y K V
Sbjct: 464 QCYGKAKQV 472
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 111/246 (45%), Gaps = 12/246 (4%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + +A + +D M +R ++ +++L+ G+ + R A H+F+ M+ +P++
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T + K + G +L + + + +T L + + + A FK++
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
++++++ + ++GK + L +F + M+P+ YT ++ C+ +
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNAM 345
E G + + G + N+ +++ + ++G EA LF+ M + + T+N +
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 346 IAGHAK 351
I H +
Sbjct: 578 IRAHLR 583
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 135/324 (41%), Gaps = 23/324 (7%)
Query: 121 NMEDARRAFDHMP----RRNVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLA 176
N+ DA F M R NVV + +L+ R A + +M+ P++ T +
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 177 IALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK 236
++A L E+L+ +IK ID D ++L + + RL+ A F+ + K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 237 ----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELG 292
NV+++ I + + +G+ +F EM + N T T+++ + + +
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 293 TQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAG 348
V G ++ + LL G + A ++F+ + + + T+N MI G
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 349 HAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIH 408
K + + +LF L+ G+K ++ T+++++S R + + +
Sbjct: 511 MCKAGKVE-----------DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 409 AQTIKTGFLSDVIVGTSLINMYIK 432
+ + G L D +LI +++
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLR 583
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 15/256 (5%)
Query: 120 GNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTL 175
G DA R M R NVV ++ L+ +V+ + A ++DEM+ P + T
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 176 AIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKE 235
+ +N L + + +I + N L + K R++ ++ F+ + +
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 236 K----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLEL 291
+ N +++T I + + +F +M+S+ + P+ T + +L C +E
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 292 GTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILF-----KGMDDASLVTWNAMI 346
V + E ++ N ++ K G + + LF KG+ ++VT+ M+
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV-KPNVVTYTTMM 543
Query: 347 AGHA-KMMEQSRDNLY 361
+G K +++ D L+
Sbjct: 544 SGFCRKGLKEEADALF 559
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 133/308 (43%), Gaps = 39/308 (12%)
Query: 139 AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALN----------ACTSLKSL 188
+ TL+ G +++R A + D M+ G P + T I +N A + LK +
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 189 KSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEK----NVISWTAA 244
+ G ++ ++ Y+ ++ +ALC+ + + AL F + K NV+++ +
Sbjct: 248 EQG-KIEPGVVIYN-----TIIDALCNYKN----VNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 245 ISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGY 304
I + G+ R+ +M+ + PN T ++++ + L +++ K
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 305 ESNLRVRNSLLYLYLKRGCIGEAQILFKGMDD----ASLVTWNAMIAGHAKMMEQSRDNL 360
+ ++ +SL+ + + EA+ +F+ M ++VT+N +I G K
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD---- 413
Query: 361 YACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQGEQIHAQTIKTGFLSDV 420
E + LF +++ G+ + T+++++ + + + Q + G L D+
Sbjct: 414 -------EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 421 IVGTSLIN 428
+ + L++
Sbjct: 467 MTYSILLD 474
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 105/262 (40%), Gaps = 46/262 (17%)
Query: 136 NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLH 195
+ V + ++ G+ R A V EM+ G P++ T L ++G+ H
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF-----FRAGQIRH 248
Query: 196 AYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVISWTAAISSCGDSGKAK 255
A+ EF L+ KR E +V+++T + G +G+ K
Sbjct: 249 AW--------------------------EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 256 KGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLL 315
+ +F EM+ E + P+ T +++ C+ +E + + GYE N+ N L+
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 316 YLYLKRGCIGEAQILFKGMD----DASLVTWNAMIAGHAKMMEQSRDNLYACWNGTEALN 371
G + L + M+ + + T+N MI +++ C +AL
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE-----------CSEVEKALG 391
Query: 372 LFSKLNCSGMKLDLFTFSSVLS 393
LF K+ +L T++ ++S
Sbjct: 392 LFEKMGSGDCLPNLDTYNILIS 413
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 129/317 (40%), Gaps = 67/317 (21%)
Query: 143 LMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSLKSLKSGEQLHAYIIKYH 202
L G++ + R + AF +F EM+H+ PS+ L A +L+ ++ + Y
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 203 IDFDTSVGNALCSLYSKCGRLEFAL----KAFKRIKEKNVISWTAAISSCGDSGKAKKGL 258
I D L + +C RL FAL K K E +++++ + + +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 259 RIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCTKLGYESNLRVRNSLLY-- 316
+ + M+ +PN +++ C+ L + ++ + K G +++ N+LL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 317 ---------------------------------LYLKRGCIGEAQILFKGMDDASL---- 339
+++K+G + EAQ L+K M +S+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 340 VTWNAMIAG---HAKMMEQSRD-NLYA---CWNGT-----------------EALNLFSK 375
VT+N++I G H ++ + + +L A C+ E + LF +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 376 LNCSGMKLDLFTFSSVL 392
++C G D+FT+++++
Sbjct: 342 MSCEGFNADIFTYNTLI 358
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 24/291 (8%)
Query: 118 KCGNMEDARRAFDHMPRR----NVVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMN 173
K G + A + M ++ +VV + TL+ G + R A + +M+ P +
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 174 TLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRI 233
T ++ +L ++L+ +I+ +D + N++ + GRL A K F +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 234 KEK----NVISWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFL 289
K NV+++ IS +G+++F M E + +T +++ C++ L
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 290 ELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDA----SLVTWNAM 345
+ + ++ LL+ G I A + F M ++ +V +N M
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 346 IAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFS-SVLSVC 395
I G K D + W LF +L G+K D T++ +L +C
Sbjct: 428 IHGLCKA-----DKVEKAW------ELFCRLPVEGVKPDARTYTIMILGLC 467
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 24/336 (7%)
Query: 118 KCGNMEDARRAFDHMPRRN-----VVAWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSM 172
K G +EDA M ++ + TL+ G + KHA + D ML G P +
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 173 NTLAIALNACTSLKSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKR 232
T ++ L +K ++ +I +T N L S K ++E A + +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 233 IKEKNVI----SWTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQF 288
+ K ++ ++ + I + + + +F EM S+ +P+E+T ++ C
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 289 LELGTQVHSMCTKLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMD----DASLVTWNA 344
L+ + G ++ N+L+ + K EA+ +F M+ + VT+N
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 345 MIAGHAKMMEQSRDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVLSVCGRMVAFVQG 404
+I G K SR +A L ++ G K D +T++S+L+ R +
Sbjct: 511 LIDGLCK----SR-------RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 405 EQIHAQTIKTGFLSDVIVGTSLINMYIKCASVVCAS 440
I G D++ +LI+ K V AS
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 127/342 (37%), Gaps = 60/342 (17%)
Query: 70 DSSFYIPLLQQCIDKRSFSDTQIVHGHIMKTGNHEDXXXXXXXXXXXXKCGNMEDARRAF 129
D+ FY +L +D S +I H + G D + + A
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 130 DHMPRRNVV----AWTTLMLGYVQNSRPKHAFHVFDEMLHTGSYPSMNTLAIALNACTSL 185
+ MP +V +TT+M GY++ A + ++M+ G S + +++
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC--SWSNVSV-------- 262
Query: 186 KSLKSGEQLHAYIIKYHIDFDTSVGNALCSLYSKCGRLEFALKAFKRIKEKNVI-----S 240
N + + K GR+E AL + + ++ +
Sbjct: 263 -------------------------NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 241 WTAAISSCGDSGKAKKGLRIFVEMLSENMQPNEYTLTSVLSQCCEIQFLELGTQVHSMCT 300
+ ++ +G K + I ML E P+ YT SV+S C++ ++ +V
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 301 KLGYESNLRVRNSLLYLYLKRGCIGEAQILFKGMDDASLV----TWNAMIAGHAKMMEQS 356
N N+L+ K + EA L + + ++ T+N++I G
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG-------- 409
Query: 357 RDNLYACWNGTEALNLFSKLNCSGMKLDLFTFSSVL-SVCGR 397
L N A+ LF ++ G + D FT++ ++ S+C +
Sbjct: 410 ---LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448