Miyakogusa Predicted Gene
- Lj1g3v0162600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0162600.1 Non Chatacterized Hit- tr|I1MB13|I1MB13_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13750 PE,77.27,0,no
description,Tify; zinc finger binding to DNA consensus sequenc,Zinc
finger, GATA-type; seg,NULL; ,CUFF.25309.1
(319 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24470.2 | Symbols: ZIM, GATA25 | GATA-type zinc finger prote... 280 1e-75
AT4G24470.1 | Symbols: ZIM, TIFY1, GATA25 | GATA-type zinc finge... 280 1e-75
AT4G24470.3 | Symbols: TIFY1 | GATA-type zinc finger protein wit... 275 2e-74
AT1G51600.2 | Symbols: ZML2, TIFY2A, GATA28 | ZIM-LIKE 2 | chr1:... 224 6e-59
AT1G51600.1 | Symbols: ZML2, TIFY2A, GATA28 | ZIM-LIKE 2 | chr1:... 224 6e-59
AT3G21175.2 | Symbols: ZML1, GATA24 | ZIM-like 1 | chr3:7422832-... 220 9e-58
AT3G21175.1 | Symbols: ZML1, TIFY2B, GATA24 | ZIM-like 1 | chr3:... 215 3e-56
AT3G21175.3 | Symbols: ZML1, GATA24 | ZIM-like 1 | chr3:7422832-... 144 1e-34
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 59 3e-09
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 59 5e-09
AT2G46670.1 | Symbols: | CCT motif family protein | chr2:191645... 59 5e-09
AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7... 55 6e-08
AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5... 54 1e-07
AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 53 4e-07
AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 52 4e-07
AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3... 52 4e-07
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif -co... 52 5e-07
AT4G26150.1 | Symbols: CGA1, GATA22, GNL | cytokinin-responsive ... 49 7e-06
AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 | c... 48 7e-06
>AT4G24470.2 | Symbols: ZIM, GATA25 | GATA-type zinc finger protein
with TIFY domain | chr4:12645785-12647734 FORWARD
LENGTH=309
Length = 309
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 171/245 (69%), Gaps = 4/245 (1%)
Query: 52 HIQY---ESNPLEDGSGVAVEDVTSDAVYVSGHAGGGSDYSSLVPHCDDSSQLTLSFRGQ 108
HI Y E P D A D+ D + H GS+ P + ++QLT+SFRGQ
Sbjct: 33 HIPYDDMEEIPHPDSIYGAASDLIPDGSQLVAHRSDGSELLVSRPP-EGANQLTISFRGQ 91
Query: 109 VYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRGSMEYPARCSLPQRAASLN 168
VYVFD+V DKV AVL LLGG G ++ A QQN +EY +RCSLPQRA SL+
Sbjct: 92 VYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLD 151
Query: 169 RFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGSGTDQESGQDDSQAE 228
RFR+KR RC++KKVRYGVRQEVALRM RNKGQFTSSK DGA SGTDQ+S QDD+ E
Sbjct: 152 RFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPE 211
Query: 229 TSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSKRNQEHSLVQVEQVDG 288
SCTHCG SSK TPMMRRGPSGPR+LCNACGLFWANRG LRDLSK+ +E+ L ++ DG
Sbjct: 212 ISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDG 271
Query: 289 GNSAD 293
G+ AD
Sbjct: 272 GSVAD 276
>AT4G24470.1 | Symbols: ZIM, TIFY1, GATA25 | GATA-type zinc finger
protein with TIFY domain | chr4:12645785-12647734
FORWARD LENGTH=309
Length = 309
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 171/245 (69%), Gaps = 4/245 (1%)
Query: 52 HIQY---ESNPLEDGSGVAVEDVTSDAVYVSGHAGGGSDYSSLVPHCDDSSQLTLSFRGQ 108
HI Y E P D A D+ D + H GS+ P + ++QLT+SFRGQ
Sbjct: 33 HIPYDDMEEIPHPDSIYGAASDLIPDGSQLVAHRSDGSELLVSRPP-EGANQLTISFRGQ 91
Query: 109 VYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRGSMEYPARCSLPQRAASLN 168
VYVFD+V DKV AVL LLGG G ++ A QQN +EY +RCSLPQRA SL+
Sbjct: 92 VYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLD 151
Query: 169 RFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGSGTDQESGQDDSQAE 228
RFR+KR RC++KKVRYGVRQEVALRM RNKGQFTSSK DGA SGTDQ+S QDD+ E
Sbjct: 152 RFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPE 211
Query: 229 TSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSKRNQEHSLVQVEQVDG 288
SCTHCG SSK TPMMRRGPSGPR+LCNACGLFWANRG LRDLSK+ +E+ L ++ DG
Sbjct: 212 ISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDG 271
Query: 289 GNSAD 293
G+ AD
Sbjct: 272 GSVAD 276
>AT4G24470.3 | Symbols: TIFY1 | GATA-type zinc finger protein with
TIFY domain | chr4:12645785-12647734 FORWARD LENGTH=317
Length = 317
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 172/253 (67%), Gaps = 12/253 (4%)
Query: 52 HIQY---ESNPLEDGSGVAVEDVTSDAVYVSGHAGGGSDYSSLVPHCDDSSQLTLSFRGQ 108
HI Y E P D A D+ D + H GS+ P + ++QLT+SFRGQ
Sbjct: 33 HIPYDDMEEIPHPDSIYGAASDLIPDGSQLVAHRSDGSELLVSRP-PEGANQLTISFRGQ 91
Query: 109 VYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRGSMEYPARCSLPQRAASLN 168
VYVFD+V DKV AVL LLGG G ++ A QQN +EY +RCSLPQRA SL+
Sbjct: 92 VYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLD 151
Query: 169 RFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGSGTDQESGQDDSQAE 228
RFR+KR RC++KKVRYGVRQEVALRM RNKGQFTSSK DGA SGTDQ+S QDD+ E
Sbjct: 152 RFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPE 211
Query: 229 TSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSKRNQEHSLVQVEQV-- 286
SCTHCG SSK TPMMRRGPSGPR+LCNACGLFWANRG LRDLSK+ +E+ L ++ V
Sbjct: 212 ISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPVSS 271
Query: 287 ------DGGNSAD 293
DGG+ AD
Sbjct: 272 YKYHPDDGGSVAD 284
>AT1G51600.2 | Symbols: ZML2, TIFY2A, GATA28 | ZIM-LIKE 2 |
chr1:19133176-19135252 FORWARD LENGTH=302
Length = 302
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 157/246 (63%), Gaps = 25/246 (10%)
Query: 52 HIQYESNPLE---DGSGVAVEDVTSDA----------VYVSGHAGGGSDYSSLVPH--CD 96
H+Q+E + L +GSG+ V+D D + H G +D V +
Sbjct: 21 HVQFEHHALHHIHNGSGM-VDDQADDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSE 79
Query: 97 DSSQLTLSFRGQVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRGSME-YP 155
QLTLSF+GQVYVFDSV +KVQAVLLLLGG ELPQA P + + Q N+ S+ P
Sbjct: 80 QGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTP 139
Query: 156 ARCSLPQRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS- 214
R S+PQR ASL RFR+KRK R +DKK+RY VR+EVALRM RNKGQFTS+K + S
Sbjct: 140 QRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASA 199
Query: 215 ----GTDQESGQDDSQA---ETSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGA 267
G++Q + S+A E SC HCG KSTPMMRRGP+GPR+LCNACGL WAN+GA
Sbjct: 200 GSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGA 259
Query: 268 LRDLSK 273
RDLSK
Sbjct: 260 FRDLSK 265
>AT1G51600.1 | Symbols: ZML2, TIFY2A, GATA28 | ZIM-LIKE 2 |
chr1:19133176-19135252 FORWARD LENGTH=302
Length = 302
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 157/246 (63%), Gaps = 25/246 (10%)
Query: 52 HIQYESNPLE---DGSGVAVEDVTSDA----------VYVSGHAGGGSDYSSLVPH--CD 96
H+Q+E + L +GSG+ V+D D + H G +D V +
Sbjct: 21 HVQFEHHALHHIHNGSGM-VDDQADDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSE 79
Query: 97 DSSQLTLSFRGQVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRGSME-YP 155
QLTLSF+GQVYVFDSV +KVQAVLLLLGG ELPQA P + + Q N+ S+ P
Sbjct: 80 QGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTP 139
Query: 156 ARCSLPQRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS- 214
R S+PQR ASL RFR+KRK R +DKK+RY VR+EVALRM RNKGQFTS+K + S
Sbjct: 140 QRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASA 199
Query: 215 ----GTDQESGQDDSQA---ETSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGA 267
G++Q + S+A E SC HCG KSTPMMRRGP+GPR+LCNACGL WAN+GA
Sbjct: 200 GSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGA 259
Query: 268 LRDLSK 273
RDLSK
Sbjct: 260 FRDLSK 265
>AT3G21175.2 | Symbols: ZML1, GATA24 | ZIM-like 1 |
chr3:7422832-7424598 FORWARD LENGTH=295
Length = 295
Score = 220 bits (561), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 151/234 (64%), Gaps = 15/234 (6%)
Query: 51 HHIQYESNPLED-GSGVAVEDVTSDAVYVSGHAGGGSDYSSLVPH--CDDSSQLTLSFRG 107
HHI E++ ++D G E V +D + H G +D V ++ QLTLSF+G
Sbjct: 30 HHIDNENSMMDDHADGGMDEGVETD---IPSHPGNSADNRGEVVDRGIENGDQLTLSFQG 86
Query: 108 QVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRGSMEYPARCSLPQRAASL 167
QVYVFD V+ +KVQAVLLLLGG E+P P + QN RG P R S+PQR ASL
Sbjct: 87 QVYVFDRVSPEKVQAVLLLLGGREVPHT-LPTTLGSPHQNNRGLSGTPQRLSVPQRLASL 145
Query: 168 NRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS-GTDQES------ 220
RFR+KRK R +DK +RY VR+EVALRM R KGQFTS+K + +GS G+D S
Sbjct: 146 LRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAV 205
Query: 221 -GQDDSQAETSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSK 273
G + + E C HCGTS KSTPMMRRGP GPR+LCNACGL WAN+G LRDLSK
Sbjct: 206 EGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSK 259
>AT3G21175.1 | Symbols: ZML1, TIFY2B, GATA24 | ZIM-like 1 |
chr3:7422832-7424598 FORWARD LENGTH=297
Length = 297
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 151/236 (63%), Gaps = 17/236 (7%)
Query: 51 HHIQYESNPLED-GSGVAVEDVTSDAVYVSGHAGGGSDYSSLVPH--CDDSSQLTLSFRG 107
HHI E++ ++D G E V +D + H G +D V ++ QLTLSF+G
Sbjct: 30 HHIDNENSMMDDHADGGMDEGVETD---IPSHPGNSADNRGEVVDRGIENGDQLTLSFQG 86
Query: 108 QVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQR--GSMEYPARCSLPQRAA 165
QVYVFD V+ +KVQAVLLLLGG E+P P + QN R G P R S+PQR A
Sbjct: 87 QVYVFDRVSPEKVQAVLLLLGGREVPHT-LPTTLGSPHQNNRVLGLSGTPQRLSVPQRLA 145
Query: 166 SLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS-GTDQES---- 220
SL RFR+KRK R +DK +RY VR+EVALRM R KGQFTS+K + +GS G+D S
Sbjct: 146 SLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSW 205
Query: 221 ---GQDDSQAETSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSK 273
G + + E C HCGTS KSTPMMRRGP GPR+LCNACGL WAN+G LRDLSK
Sbjct: 206 AVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSK 261
>AT3G21175.3 | Symbols: ZML1, GATA24 | ZIM-like 1 |
chr3:7422832-7423765 FORWARD LENGTH=216
Length = 216
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 110/176 (62%), Gaps = 8/176 (4%)
Query: 51 HHIQYESNPLED-GSGVAVEDVTSDAVYVSGHAGGGSDYSSLVPH--CDDSSQLTLSFRG 107
HHI E++ ++D G E V +D + H G +D V ++ QLTLSF+G
Sbjct: 30 HHIDNENSMMDDHADGGMDEGVETD---IPSHPGNSADNRGEVVDRGIENGDQLTLSFQG 86
Query: 108 QVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRGSMEYPARCSLPQRAASL 167
QVYVFD V+ +KVQAVLLLLGG E+P P + QN RG P R S+PQR ASL
Sbjct: 87 QVYVFDRVSPEKVQAVLLLLGGREVPHT-LPTTLGSPHQNNRGLSGTPQRLSVPQRLASL 145
Query: 168 NRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS-GTDQESGQ 222
RFR+KRK R +DK +RY VR+EVALRM R KGQFTS+K + +GS G+D S Q
Sbjct: 146 LRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQ 201
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19233422-19234901 FORWARD LENGTH=351
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 102 TLSFRGQVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRG------SMEYP 155
++SFR QV + +VT K + + + E +A + V+ +Q G S E P
Sbjct: 229 SVSFRNQV-LQSTVTNQKQDSPIPVESNRE--KAASKEVEAGSQSTNEGIAGQSSSTEKP 285
Query: 156 A-------RCSLPQRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQ 208
R S QR A+L +FR KRK+RC+DKKVRY R+++A + R KGQF +
Sbjct: 286 KEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNS 345
Query: 209 DGANGS 214
D + S
Sbjct: 346 DASTKS 351
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19232874-19234901 FORWARD LENGTH=468
Length = 468
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 102 TLSFRGQVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRG------SMEYP 155
++SFR QV + +VT K + + + E +A + V+ +Q G S E P
Sbjct: 346 SVSFRNQV-LQSTVTNQKQDSPIPVESNRE--KAASKEVEAGSQSTNEGIAGQSSSTEKP 402
Query: 156 A-------RCSLPQRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQ 208
R S QR A+L +FR KRK+RC+DKKVRY R+++A + R KGQF +
Sbjct: 403 KEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNS 462
Query: 209 DGANGS 214
D + S
Sbjct: 463 DASTKS 468
>AT2G46670.1 | Symbols: | CCT motif family protein |
chr2:19164589-19165233 REVERSE LENGTH=183
Length = 183
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 102 TLSFRGQVYVFDSVTTDKVQAVLLLLGGCELPQAGTPCVDTAAQQNQRG------SMEYP 155
++SFR QV + +VT K + + + E +A + V+ +Q G S E P
Sbjct: 61 SVSFRNQV-LQSTVTNQKQDSPIPVESNRE--KAASKEVEAGSQSTNEGIAGQSSSTEKP 117
Query: 156 A-------RCSLPQRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQ 208
R S QR A+L +FR KRK+RC+DKKVRY R+++A + R KGQF +
Sbjct: 118 KEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNS 177
Query: 209 DGANGS 214
D + S
Sbjct: 178 DASTKS 183
>AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7 |
chr5:638283-641461 REVERSE LENGTH=727
Length = 727
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 160 LPQRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFT 203
+ QR A+L +FRQKRKERC+ KKVRY R+++A + R +GQF
Sbjct: 666 ISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFV 709
>AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5 |
chr5:8356204-8358873 REVERSE LENGTH=667
Length = 667
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 162 QRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFT 203
QR A+L +FR KRK+RCY+KKVRY R+++A + R KGQF
Sbjct: 617 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFV 658
>AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=522
Length = 522
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 162 QRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS 214
QR A+L +FR KRKERC++KKVRY R+++A + KGQF K+ D +GS
Sbjct: 468 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFI-RKRDDHKSGS 519
>AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 162 QRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS 214
QR A+L +FR KRKERC++KKVRY R+++A + KGQF K+ D +GS
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFI-RKRDDHKSGS 492
>AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 162 QRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGANGS 214
QR A+L +FR KRKERC++KKVRY R+++A + KGQF K+ D +GS
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFI-RKRDDHKSGS 492
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif
-containing response regulator protein |
chr5:24675540-24678176 FORWARD LENGTH=618
Length = 618
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 160 LPQRAASLNRFRQKRKERCYDKKVRYGVRQEVALRMHRNKGQFTSSKKQDGAN 212
L +R +L +FR+KR +RC+DKK+RY R+ +A R R KGQF +K +G N
Sbjct: 530 LDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFV--RKMNGVN 580
>AT4G26150.1 | Symbols: CGA1, GATA22, GNL | cytokinin-responsive
gata factor 1 | chr4:13253210-13254659 FORWARD
LENGTH=352
Length = 352
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 182 KVRYGVRQEVALRMHRNKGQFTSSKKQDGANGSGTDQESGQDDSQAETSCTHCGTSSKST 241
KVR +++ + + Q T++ + +N S +++++G ++ C+ C T+ T
Sbjct: 154 KVRLMKKKKAIITTSDSSKQHTNNDQ--SSNLSNSERQNGYNNDCVIRICSDCNTTK--T 209
Query: 242 PMMRRGPSGPRSLCNACGL 260
P+ R GP GP+SLCNACG+
Sbjct: 210 PLWRSGPRGPKSLCNACGI 228
>AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 |
chr3:2126658-2127265 FORWARD LENGTH=149
Length = 149
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 225 SQAETSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDL 271
S + SC CGTS TP+ R GP+GP+SLCNACG+ NR R L
Sbjct: 37 SNEKKSCAICGTSK--TPLWRGGPAGPKSLCNACGI--RNRKKRRTL 79