Miyakogusa Predicted Gene

Lj1g3v0131230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0131230.1 tr|Q9MAI7|Q9MAI7_ARATH F12M16.4 OS=Arabidopsis
thaliana GN=At1g53165 PE=4 SV=1,44.25,2e-19,seg,NULL;
coiled-coil,NULL,NODE_41961_length_879_cov_52.515358.path1.1
         (130 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G15220.1 | Symbols:  | Protein kinase superfamily protein | c...   105   1e-23
AT1G53165.2 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfami...   101   1e-22
AT1G53165.1 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfami...   101   1e-22
AT1G53165.3 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfami...   101   1e-22

>AT3G15220.1 | Symbols:  | Protein kinase superfamily protein |
           chr3:5126899-5131752 REVERSE LENGTH=690
          Length = 690

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 76/112 (67%), Gaps = 7/112 (6%)

Query: 16  KEAIANDPEGSIAQTVINSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQI 75
           KEA+ +D + S  +TV  SLV MER  P SC+  +  L++ L SSKE+S+K+L ++A  +
Sbjct: 586 KEALGDDSKESTVRTVSRSLVMMEREKPGSCEAFVAKLIELLGSSKEASVKELHDMAVCV 645

Query: 76  FNKTNSAEETHRNAEPDNRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDV 127
           F KT     T  NAE  N+ KQ NK+  SN+++SPL RFLLSRW GQSSRD+
Sbjct: 646 FAKT-----TPDNAE--NKMKQANKEFSSNTNVSPLGRFLLSRWLGQSSRDL 690


>AT1G53165.2 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfamily
           protein | chr1:19814386-19819233 FORWARD LENGTH=680
          Length = 680

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 76/113 (67%), Gaps = 8/113 (7%)

Query: 17  EAIA-NDPEGSIAQTVINSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQI 75
           EA+  +D +G+I   V  SLV MER  P S +  I  L++QL S+KE S+K++Q++A ++
Sbjct: 573 EAVGGDDSKGTIGHRVSRSLVKMEREKPGSSEAFIAKLIEQLGSTKEVSVKEVQDMAIRV 632

Query: 76  FNKTNSAEETHRNAEPDNRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVN 128
           F KT        N + +N++KQ +K+  SN++ SPLARFL SRW GQ+SRD+N
Sbjct: 633 FAKT-------MNNDAENKRKQASKEFSSNANFSPLARFLFSRWLGQTSRDLN 678


>AT1G53165.1 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfamily
           protein | chr1:19814386-19819233 FORWARD LENGTH=680
          Length = 680

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 76/113 (67%), Gaps = 8/113 (7%)

Query: 17  EAIA-NDPEGSIAQTVINSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQI 75
           EA+  +D +G+I   V  SLV MER  P S +  I  L++QL S+KE S+K++Q++A ++
Sbjct: 573 EAVGGDDSKGTIGHRVSRSLVKMEREKPGSSEAFIAKLIEQLGSTKEVSVKEVQDMAIRV 632

Query: 76  FNKTNSAEETHRNAEPDNRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVN 128
           F KT        N + +N++KQ +K+  SN++ SPLARFL SRW GQ+SRD+N
Sbjct: 633 FAKT-------MNNDAENKRKQASKEFSSNANFSPLARFLFSRWLGQTSRDLN 678


>AT1G53165.3 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfamily
           protein | chr1:19814386-19819233 FORWARD LENGTH=688
          Length = 688

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 76/113 (67%), Gaps = 8/113 (7%)

Query: 17  EAIA-NDPEGSIAQTVINSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQI 75
           EA+  +D +G+I   V  SLV MER  P S +  I  L++QL S+KE S+K++Q++A ++
Sbjct: 581 EAVGGDDSKGTIGHRVSRSLVKMEREKPGSSEAFIAKLIEQLGSTKEVSVKEVQDMAIRV 640

Query: 76  FNKTNSAEETHRNAEPDNRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVN 128
           F KT        N + +N++KQ +K+  SN++ SPLARFL SRW GQ+SRD+N
Sbjct: 641 FAKT-------MNNDAENKRKQASKEFSSNANFSPLARFLFSRWLGQTSRDLN 686