Miyakogusa Predicted Gene

Lj1g3v0130050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0130050.1 Non Chatacterized Hit- tr|I3SGG9|I3SGG9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,92.75,0,SUBFAMILY
NOT NAMED,NULL; HEXAPRENYLDIHYDROXYBENZOATE
METHYLTRANSFERASE,Ubiquinone biosynthesis
O-me,NODE_62283_length_945_cov_25.612698.path1.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30920.1 | Symbols: ATCOQ3, EMB3002, COQ3 | coenzyme Q 3 | ch...   417   e-117

>AT2G30920.1 | Symbols: ATCOQ3, EMB3002, COQ3 | coenzyme Q 3 |
           chr2:13157409-13159824 REVERSE LENGTH=322
          Length = 322

 Score =  417 bits (1073), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 189/242 (78%), Positives = 219/242 (90%)

Query: 32  LNRNELAKFAAIAETWWDSEGPFKPLHAMNPTRLAFVRSVLCRHFKKDPYSAKPLEGLKI 91
           LN +ELAKF+AIA+TWW SEGPFKPLH MNPTRLAF+RS LCRHF KDP SAKP EGLK 
Sbjct: 76  LNEDELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKF 135

Query: 92  ADVGCGGGILSEPLARLGATVTGVDAVEKNIKIARLHADLDPTTSTIEYCCTTAETLVEE 151
            D+GCGGG+LSEPLAR+GATVTGVDAV+KN+KIARLHAD+DP TSTIEY CTTAE L +E
Sbjct: 136 IDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADE 195

Query: 152 GRKFDAVMALEVIEHVADPAEFCKSLSALTISDGATVISTINRSMRAYATAIVAAEYILR 211
           GRKFDAV++LEVIEHVA+PAEFCKSLSALTI +GATV+STINR+MRAYA+ IV AEYILR
Sbjct: 196 GRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTMRAYASTIVGAEYILR 255

Query: 212 WLPRGTHDWSSFLTPGELVLILQRAGINVEEMAGFVYNPLTGQWSLSDDIGVNFIAFGTK 271
           WLP+GTH WSSF+TP E+ +ILQRA ++V+E+AGFVYNP+TG+W LSDDI VN+IA+GTK
Sbjct: 256 WLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYIAYGTK 315

Query: 272 TK 273
            K
Sbjct: 316 RK 317