Miyakogusa Predicted Gene

Lj1g3v0129780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0129780.1 Non Chatacterized Hit- tr|K4DDC0|K4DDC0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,63.01,4e-18,PARG_cat,Poly(ADP-ribose)
glycohydrolase,NODE_57825_length_377_cov_35.822281.path1.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31865.2 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2...    94   3e-20
AT2G31865.1 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2...    93   3e-20
AT2G31870.1 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase (P...    82   5e-17
AT2G31870.2 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase (P...    82   6e-17

>AT2G31865.2 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2 |
           chr2:13546790-13549472 REVERSE LENGTH=532
          Length = 532

 Score = 93.6 bits (231), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 51/70 (72%)

Query: 1   MPQGVVSFERKVLPLEDDYIHISYPNADVWSTSIIPLCRFEVHSSGLIEDQLSEAVEVDF 60
           MP G VSFERK+LPLE     +SYP AD W+ S+ PLC  E+H+SG IEDQ  EA+EVDF
Sbjct: 208 MPTGFVSFERKILPLEYHPHFVSYPKADSWANSVTPLCSIEIHTSGAIEDQPCEALEVDF 267

Query: 61  ANEYLGGGAL 70
           A+EY GG  L
Sbjct: 268 ADEYFGGLTL 277


>AT2G31865.1 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2 |
           chr2:13546790-13549472 REVERSE LENGTH=522
          Length = 522

 Score = 93.2 bits (230), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 51/70 (72%)

Query: 1   MPQGVVSFERKVLPLEDDYIHISYPNADVWSTSIIPLCRFEVHSSGLIEDQLSEAVEVDF 60
           MP G VSFERK+LPLE     +SYP AD W+ S+ PLC  E+H+SG IEDQ  EA+EVDF
Sbjct: 208 MPTGFVSFERKILPLEYHPHFVSYPKADSWANSVTPLCSIEIHTSGAIEDQPCEALEVDF 267

Query: 61  ANEYLGGGAL 70
           A+EY GG  L
Sbjct: 268 ADEYFGGLTL 277


>AT2G31870.1 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase
           (PARG) | chr2:13549999-13553756 REVERSE LENGTH=548
          Length = 548

 Score = 82.4 bits (202), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 9/73 (12%)

Query: 1   MPQGVVSFERKVLPLEDDYIHISYPNADVWSTSIIPLCRFEVHSSGLIEDQLSEAVEVDF 60
           +P G+VSFERK+          + P+AD WS S + LC F+VHS GLIEDQ   A+EVDF
Sbjct: 206 VPIGIVSFERKI---------TAAPDADFWSKSDVSLCAFKVHSFGLIEDQPDNALEVDF 256

Query: 61  ANEYLGGGALRRG 73
           AN+YLGGG+L RG
Sbjct: 257 ANKYLGGGSLSRG 269


>AT2G31870.2 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase
           (PARG) | chr2:13549999-13553756 REVERSE LENGTH=547
          Length = 547

 Score = 82.4 bits (202), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 9/73 (12%)

Query: 1   MPQGVVSFERKVLPLEDDYIHISYPNADVWSTSIIPLCRFEVHSSGLIEDQLSEAVEVDF 60
           +P G+VSFERK+          + P+AD WS S + LC F+VHS GLIEDQ   A+EVDF
Sbjct: 206 VPIGIVSFERKI---------TAAPDADFWSKSDVSLCAFKVHSFGLIEDQPDNALEVDF 256

Query: 61  ANEYLGGGALRRG 73
           AN+YLGGG+L RG
Sbjct: 257 ANKYLGGGSLSRG 269