Miyakogusa Predicted Gene
- Lj1g3v0116710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0116710.1 tr|Q5W964|Q5W964_9BRYO PpPPR_98 protein
OS=Physcomitrella patens GN=PpPPR_98 PE=2
SV=1,23.98,3e-18,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; TPR-like,NULL;
PPR_2,Pe,CUFF.25830.1
(550 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 650 0.0
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 1e-96
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 6e-96
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 341 9e-94
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 337 2e-92
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 7e-90
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 327 2e-89
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 326 3e-89
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 321 9e-88
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 9e-88
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 8e-87
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 4e-86
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 310 1e-84
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 3e-84
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 308 8e-84
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 9e-83
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 1e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 7e-81
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 292 5e-79
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 291 8e-79
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 9e-79
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 291 1e-78
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 291 1e-78
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 8e-78
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 286 3e-77
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 4e-77
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 285 6e-77
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 8e-77
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 8e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 281 1e-75
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 277 1e-74
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 276 3e-74
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 9e-74
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 2e-73
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 272 4e-73
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 270 3e-72
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 268 6e-72
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 265 7e-71
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 4e-68
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 255 6e-68
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 255 7e-68
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 254 1e-67
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 5e-67
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 251 8e-67
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 251 1e-66
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 246 4e-65
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 6e-64
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 241 1e-63
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 240 2e-63
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 7e-63
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 5e-62
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 7e-62
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 9e-62
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 3e-61
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 3e-60
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 228 6e-60
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 228 9e-60
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 227 2e-59
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 224 1e-58
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 4e-57
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 217 1e-56
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 6e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 4e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 5e-53
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 6e-53
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 9e-53
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 9e-51
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 192 5e-49
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 8e-46
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 170 2e-42
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 1e-41
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 1e-41
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 9e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 6e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 6e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 109 5e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 9e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 106 4e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 9e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 104 1e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 102 7e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 8e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 98 1e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 3e-20
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 91 1e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 90 4e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 87 3e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 5e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 5e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 80 4e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 5e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 4e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 8e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 2e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 4e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 62 7e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 62 8e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 59 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 56 8e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 2e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/553 (55%), Positives = 414/553 (74%), Gaps = 3/553 (0%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQR-MANGNKFIDNCILQMYCDCKS 59
MD+A +S+ SY+ LF+ C L +LS G+L H+R++ + N + + NC+LQMYC+C+S
Sbjct: 74 MDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRS 133
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A+++FDEM + + S T+ISAYAE+G + A+ LFS ML G KP SS++ TLL S
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+P AL+ G+Q+H+ +IR G ++ SIET + NMY+KCGWL GA+ ++M K VAC
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
TGLMVGYTQA R DAL LF ++ EGV+ D FVFS+VLKACA+L+++N G+QIH+ K
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK 313
Query: 240 LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET 299
LGLESEVSVGTPLVDFY KC FE+AC+AF+ IREPND SWSAII+GYCQ +F++A++T
Sbjct: 314 LGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKT 373
Query: 300 FKNIRSKGV-ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
FK++RSK ILNSF YT+IFQACS ++D G QVHADAIK+ L+ GESA+ITMYS
Sbjct: 374 FKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYS 433
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIG 417
KCG LD A + F +++ PD +AWTA I +AY+G SEA++LF KM+ G++PN+VTFI
Sbjct: 434 KCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIA 493
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
+L ACSH+GLV++GK LD+M KY V PTIDHY+CMI +Y+R+GLL EAL+ +++MPFE
Sbjct: 494 VLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFE 553
Query: 478 PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYR 537
PD +SWK L GCW+H+NLE IA ++ LDP D+A YV FNL+ AG W+EAA+
Sbjct: 554 PDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMM 613
Query: 538 KMMAERNLRKEVS 550
K+M ER L+KE+S
Sbjct: 614 KLMNERMLKKELS 626
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 301/543 (55%), Gaps = 4/543 (0%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRM--ANGNKFIDNCILQMYCDCKSFTAAERV 66
D + L C G L G+ H ++ A+ NK I+ +L +Y C A
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK-IEGALLNLYAKCADIETALDY 446
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
F E ++ W ++ AY + + R+F +M I P+ + ++L + L
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
ELG+Q+HSQ+I+ F + + + L +MY K G LD A + K+ V+ T ++ GY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
TQ AL F +M+ G++ DE + + ACA L+ + G+QIH+ + G S++
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
LV YS+CG+ E + AFE ++ +W+A+++G+ QSG ++AL F + +
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
G+ N+F + + +A S +++ G QVHA K G +A+I+MY+KCG + A
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
+ FL + + ++W AII AY+ HG SEA+ F +M+ S VRPN VT +G+L+ACSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
GLV +G + +SM+ +YG+ P +HY C++ + +RAGLL A E I+ MP +PD L W+T
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
LL C H+N+E AA + L+P DSATYV + NL+A++ WD R+ M E+ +
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926
Query: 546 RKE 548
+KE
Sbjct: 927 KKE 929
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 248/486 (51%), Gaps = 4/486 (0%)
Query: 10 PRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFD 68
P ++ + C + +L G+ H + ++ + + ++ N ++ +Y + +AE +F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
M RD ++ T+I+ ++ G+ A+ LF RM G++P S+ +L+ + + L
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
G+QLH+ ++GF ++ IE L N+Y KC ++ A + +N V ++V Y
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
++ +F +M E + +++ + +LK C L D+ G QIHS +K + V
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
+ L+D Y+K G+ + A + SW+ +I GY Q DKAL TF+ + +G+
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
+ TN AC+ + L G Q+HA A G L ++A++T+YS+CGK++ +Y
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 369 AFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
AF E D IAW A++ + G + EA+++F +M R G+ N TF + A S +
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
+K+GKQ + ++ K G D + N +I +Y++ G + +A + + + + +SW ++
Sbjct: 708 MKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAII 765
Query: 488 GGCWSH 493
H
Sbjct: 766 NAYSKH 771
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 225/457 (49%), Gaps = 11/457 (2%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N ++ +Y A RVFD + +D SW +IS ++ AIRLF M LGI
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P+ F ++L + +LE+G+QLH ++++GF++D + L ++Y G L AE
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
+ M+ ++AV L+ G +Q A+ LF +M +G++ D + ++ AC+A +
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
G+Q+H+Y+ KLG S + L++ Y+KC E A F N W+ ++ Y
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
+ F+ ++ + ++ N + Y +I + C + DL G Q+H+ IK
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYA-YHGKSEAVKLFHKMLRS 406
S +I MY+K GKLD A+ + D ++WT +I Y Y+ +A+ F +ML
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G+R + V ++AC+ +KEG+Q + + + G + N ++ +YSR G ++E
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 467 ALEMIRSMPFEP----DTLSWKTLLGGCWSHRNLETA 499
+ + FE D ++W L+ G N E A
Sbjct: 645 SY-----LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 226/471 (47%), Gaps = 9/471 (1%)
Query: 24 GALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATII 82
G+L +G+ H+++ ++ + N + + Y A +VFDEM +R +F+W +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 83 SAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS-ALELGKQLHSQLIRIGF 141
A + LF RM+ + P+ F +L + S A ++ +Q+H++++ G
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 142 TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAK 201
+ L ++Y + G++D A + + K+ + ++ G ++ +A+ LF
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR 261
M G+ + FS VL AC ++ + G Q+H +KLG S+ V LV Y G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 262 FEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA 321
+A F ++ + + +++ +I G Q G +KA+E FK + G+ +S ++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAW 381
CSA L G Q+HA K G E A++ +Y+KC ++ A FL E + + W
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 382 TAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
++ AY + ++F +M + PN T+ +L C G ++ G+Q + S +
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ-IHSQII 517
Query: 441 KYGVDPTIDHYNC--MIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
K + ++ Y C +I +Y++ G L A +++ + D +SW T++ G
Sbjct: 518 K--TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 191/409 (46%), Gaps = 6/409 (1%)
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL-GSFADPSALELGKQLHSQLIRIG 140
IS Y E R+ S + + GI+P+ LL G +L+ G++LHSQ++++G
Sbjct: 57 ISVYISEDESFQEKRIDS-VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG 115
Query: 141 FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA 200
++ + L + Y+ G L GA ++M + ++ + LF
Sbjct: 116 LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFV 175
Query: 201 KMIKEGVKLDEFVFSIVLKAC-AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKC 259
+M+ E V +E FS VL+AC + QIH+ + GL V PL+D YS+
Sbjct: 176 RMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRN 235
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIF 319
G + A + F+ +R + SW A+I+G ++ +A+ F ++ G++ + ++++
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 320 QACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTI 379
AC I L G Q+H +K G +A++++Y G L A F + + D +
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 380 AWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
+ +I + G E A++LF +M G+ P++ T L+ ACS G + G+Q L +
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAY 414
Query: 439 SVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
+ K G ++ +Y++ ++ AL+ E + + W +L
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 348 bits (892), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 287/505 (56%), Gaps = 3/505 (0%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ N ++ MYC + F A VFD M +RDL SW ++I+ A+ G + A+ LF ++L G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 106 IKPSSSIFCTLLGSFAD-PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
+KP ++L + + P L L KQ+H I+I +D + T L + Y + + A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
E+ + + VA +M GYTQ+ L LFA M K+G + D+F + V K C L
Sbjct: 472 EILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
IN G+Q+H+Y++K G + ++ V + ++D Y KCG AA AF+SI P+D +W+ +I
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+G ++G ++A F +R GV+ + F + +A S ++ L G Q+HA+A+K
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKM 403
++++ MY+KCG +D AY F IE + AW A++ A HG+ E ++LF +M
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
G++P+ VTFIG+L+ACSHSGLV E + + SM YG+ P I+HY+C+ RAGL
Sbjct: 711 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGL 770
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
+++A +I SM E ++TLL C + ET A K+ L+PLDS+ YV + N+
Sbjct: 771 VKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 830
Query: 524 HALAGNWDEAAQYRKMMAERNLRKE 548
+A A WDE R MM ++K+
Sbjct: 831 YAAASKWDEMKLARTMMKGHKVKKD 855
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 234/475 (49%), Gaps = 13/475 (2%)
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGF 141
+S Y G ++ F+ M++ ++ F +L + +L LG+Q+H +++G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 142 TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAK 201
+++ +L NMY K A + M+ ++ ++ ++ G Q +A+ LF +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 202 MIKEGVKLDEFVFSIVLKACAALKD-INTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
+++ G+K D++ + VLKA ++L + ++ +Q+H +++K+ S+ V T L+D YS+
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 261 RFEAACQAFESIREPNDF-SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIF 319
+ A FE R D +W+A++ GY QS K L+ F + +G + F +F
Sbjct: 467 CMKEAEILFE--RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 320 QACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTI 379
+ C + + G QVHA AIK G L S ++ MY KCG + A AF +I PD +
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 380 AWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF-LDS 437
AWT +I +G+ E A +F +M GV P+ T L A S +++G+Q ++
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 438 MSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH-RNL 496
+ + DP + ++ +Y++ G + +A + + + T +W +L G H
Sbjct: 645 LKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNIT-AWNAMLVGLAQHGEGK 701
Query: 497 ETASI-AAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQY-RKMMAERNLRKEV 549
ET + K + P D T++ + + + +G EA ++ R M + ++ E+
Sbjct: 702 ETLQLFKQMKSLGIKP-DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 25 ALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIIS 83
LS K H ++ N + F+ ++ Y + AE +F E + DL +W +++
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMA 490
Query: 84 AYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTA 143
Y + ++LF+ M G + T+ + A+ GKQ+H+ I+ G+
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 144 DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI 203
D+ + + + +MY+KCG + A+ A + + + VA T ++ G + A +F++M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 204 KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFE 263
GV DEF + + KA + L + GRQIH+ ++KL ++ VGT LVD Y+KCG +
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 264 AACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS 323
A F+ I N +W+A++ G Q G + L+ FK ++S G+ + + + ACS
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 324 AISDLVYGAQVH 335
S LV A H
Sbjct: 731 H-SGLVSEAYKH 741
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 201/470 (42%), Gaps = 45/470 (9%)
Query: 29 GKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE 87
GK H R L N +F+ N ++ MY C S T A RVFD+M DRDL SW +I++AYA+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 88 EGHMI-----GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFT 142
+ A LF + + S +L + + H +IG
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 143 ADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKM 202
D + L N+Y+K G + +V +M ++ V ++ Y + +A+ L +
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 203 IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRF 262
G+ +E ++ + D + Q+ S++ ++ S + ++ F +K
Sbjct: 238 HSSGLNPNEITLRLLARISG---DDSDAGQVKSFANG----NDASSVSEII-FRNKG--- 286
Query: 263 EAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQAC 322
++ Y SG++ L+ F ++ V + + +
Sbjct: 287 ---------------------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 323 SAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWT 382
+ L G QVH A+K GL L+ +++I MY K K +A F + + D I+W
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 383 AIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSH--SGLVKEGKQFLDSMS 439
++I A +G + EAV LF ++LR G++P+ T +L A S GL + + ++
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK 445
Query: 440 VKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ D + +I YSR ++EA + F D ++W ++ G
Sbjct: 446 INNVSDSFVS--TALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAG 491
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 5/293 (1%)
Query: 16 LFKMCGMLGALSDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
+FK CG L A++ GK H ++ + + ++ + IL MY C +AA+ FD + D
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
+W T+IS E G A +FS+M +G+ P TL + + +ALE G+Q+H+
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
+++ T D + T+L +MY KCG +D A ++ N A ++VG Q +
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLV 253
L LF +M G+K D+ F VL AC+ ++ + + S G++ E+ + L
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
D + G + A ES+ S + C R ET K + +K
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAAC---RVQGDTETGKRVATK 812
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 154/373 (41%), Gaps = 42/373 (11%)
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
S L LGK H++++ + + L +MY KCG L A +KM ++ V+ ++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 184 VGYTQALRHT-----DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
Y Q+ A LLF + ++ V S +LK C + H Y+
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
K+GL+ + V LV+ Y K G+ + FE + + W+ ++ Y + G ++A++
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ-YLSGESAMITMY 357
S G+ N L A++ D G V+ + +G A
Sbjct: 233 LSSAFHSSGLNPNEIT-------------LRLLARISGDDSDAGQVKSFANGNDA----- 274
Query: 358 SKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEA-VKLFHKMLRSGVRPNAVTFI 416
S ++ + + + Y + G+ A +K F M+ S V + VTFI
Sbjct: 275 SSVSEIIFRNKG---------------LSEYLHSGQYSALLKCFADMVESDVECDQVTFI 319
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF 476
+L + G+Q + M++K G+D + N +I +Y + A + +M
Sbjct: 320 LMLATAVKVDSLALGQQ-VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS- 377
Query: 477 EPDTLSWKTLLGG 489
E D +SW +++ G
Sbjct: 378 ERDLISWNSVIAG 390
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 326 SDLVYGAQVHADAI--KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
SDL+ G HA + ++ ++L +I+MYSKCG L YA + F + D ++W +
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINN--LISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 384 IICAYAYHGK------SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDS 437
I+ AYA + +A LF + + V + +T +L C HSG V + F
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF-HG 169
Query: 438 MSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLE 497
+ K G+D ++ +Y + G ++E + MP+ D + W +L + +
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA-YLEMGFK 227
Query: 498 TASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYR 537
+I FH L+ +T+ L ++G+ +A Q +
Sbjct: 228 EEAIDLSSAFHSSGLN-PNEITLRLLARISGDDSDAGQVK 266
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 341 bits (874), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 297/545 (54%), Gaps = 32/545 (5%)
Query: 36 LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAI 95
R+ N F N +L Y + E F+++ DRD +W +I Y+ G + A+
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 96 RLFSRML-DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNM 154
+ ++ M+ D + T+L + + LGKQ+H Q+I++GF + + + + L M
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 155 YIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLF----------AKMIK 204
Y G + A+ + +N V LM G DAL LF A MIK
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIK 243
Query: 205 --------------------EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
+G+K+D++ F VL AC L IN G+QIH+ ++ +
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD 303
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+ VG+ L+D Y KC A F+ +++ N SW+A++ GY Q+GR ++A++ F +++
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
G+ + + AC+ +S L G+Q H AI GL+ Y++ ++++T+Y KCG +D
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
+ + F + D ++WTA++ AYA G++ E ++LF KM++ G++P+ VT G+++ACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+GLV++G+++ M+ +YG+ P+I HY+CMI ++SR+G L+EA+ I MPF PD + W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 484 KTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
TLL C + NLE AA + LDP A Y + +++A G WD AQ R+ M E+
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 544 NLRKE 548
N++KE
Sbjct: 604 NVKKE 608
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 143/292 (48%), Gaps = 3/292 (1%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
+ +D + + CG LGA+++GK H + R + ++ + ++ MYC CK A+
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
VFD M +++ SW ++ Y + G A+++F M GI P + + A+ S
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+LE G Q H + I G V++ +L +Y KCG +D + N+M ++AV+ T ++
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG-RQIHSYSVKLGLE 243
Y Q R + + LF KM++ G+K D + V+ AC+ + G R + + G+
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPND-FSWSAIITGYCQSGRFD 294
+ + ++D +S+ GR E A + + P D W+ +++ G +
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 284/497 (57%), Gaps = 8/497 (1%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
SF A +VFD+M + ++ +W +I+ + G AIR F M+ G + ++
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC---GWLDGAEVATNKMTTK 174
+ A+ L LGKQLHS IR G DV E +L +MY KC G +D ++M
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 175 NAVACTGLMVGYTQALR-HTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQ 232
+ ++ T L+ GY + T+A+ LF++MI +G V+ + F FS KAC L D G+Q
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 233 IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
+ + K GL S SV ++ + K R E A +AFES+ E N S++ + G C++
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
F++A + I + + +++F + ++ + + + G Q+H+ +K GL +A
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPN 411
+I+MYSKCG +D A + F +E + I+WT++I +A HG + ++ F++M+ GV+PN
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
VT++ +L+ACSH GLV EG + +SM + + P ++HY CM+ + RAGLL +A E I
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 472 RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWD 531
+MPF+ D L W+T LG C H N E +AA KI LDP + A Y+ + N++A AG W+
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWE 694
Query: 532 EAAQYRKMMAERNLRKE 548
E+ + R+ M ERNL KE
Sbjct: 695 ESTEMRRKMKERNLVKE 711
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 257/507 (50%), Gaps = 20/507 (3%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRM-ANGNKFIDNCILQMYCDCKSFTAAERV 66
+D ++ L K C GKL H RL + + N ++ +Y AE V
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 67 FDEMV---DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
F+ M RD+ SW+ +++ Y G + AI++F L+LG+ P+ + ++ + ++
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 124 SALELGKQLHSQLIRIG-FTADVSIETTLSNMYIKC-GWLDGAEVATNKMTTKNAVACTG 181
+ +G+ L++ G F +DV + +L +M++K + A +KM+ N V T
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ Q +A+ F M+ G + D+F S V ACA L++++ G+Q+HS++++ G
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 242 LESEVSVGTPLVDFYSKC---GRFEAACQAFESIREPNDFSWSAIITGYCQSGRF-DKAL 297
L +V LVD Y+KC G + + F+ + + + SW+A+ITGY ++ +A+
Sbjct: 300 LVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 298 ETFKNIRSKG-VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITM 356
F + ++G V N F +++ F+AC +SD G QV A K+GL S +++I+M
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTF 415
+ K +++ A +AF ++ + + +++ + + E A KL ++ + +A TF
Sbjct: 418 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 477
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP 475
LL+ ++ G +++G+Q + S VK G+ N +I +YS+ G + A + M
Sbjct: 478 ASLLSGVANVGSIRKGEQ-IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 476 FEPDTLSWKTLLGGCWSH----RNLET 498
+ +SW +++ G H R LET
Sbjct: 537 -NRNVISWTSMITGFAKHGFAIRVLET 562
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 8 IDPR--SYKHLFKMCGMLGALSDGK-LFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAE 64
++P ++ FK CG L GK + +R N + N ++ M+ A+
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
R F+ + +++L S+ T + + A +L S + + + S+ F +LL A+
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
++ G+Q+HSQ++++G + + + L +MY KCG +D A N M +N ++ T ++
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG-RQIHSYSVKLGLE 243
G+ + L F +MI+EGVK +E + +L AC+ + ++ G R +S ++
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 244 SEVSVGTPLVDFYSKCG 260
++ +VD + G
Sbjct: 609 PKMEHYACMVDLLCRAG 625
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 150/311 (48%), Gaps = 16/311 (5%)
Query: 202 MIKEGVK-LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
M ++G++ +D FS +LK+C +D G+ +H+ ++ +E + + L+ YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 261 RFEAACQAFESIR---EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
A FE++R + + SWSA++ Y +GR A++ F G++ N + YT
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESAMITMYSKC-GKLDYAYQAFLTIEK 375
+ +ACS + G +K G + + ++I M+ K + AY+ F + +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 376 PDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
+ + WT +I G EA++ F M+ SG + T + +AC+ + GKQ
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ- 290
Query: 435 LDSMSVKYGVDPTIDHYNC-MIGVYSRA---GLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
L S +++ G+ +D C ++ +Y++ G + + ++ M + +SW L+ G
Sbjct: 291 LHSWAIRSGL---VDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGY 346
Query: 491 WSHRNLETASI 501
+ NL T +I
Sbjct: 347 MKNCNLATEAI 357
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 297/539 (55%), Gaps = 6/539 (1%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
+ ++C G G H L + +G N N ++ MYC C+ A +VFD M +R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
+ SW+ ++S + G + G++ LFS M GI P+ F T L + +ALE G Q+H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
++IGF V + +L +MY KCG ++ AE ++ ++ ++ ++ G+ A +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 195 ALLLFAKMIKEGVK--LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE--SEVSVGT 250
AL F M + +K DEF + +LKAC++ I G+QIH + V+ G S ++
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 251 PLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL 310
LVD Y KCG +A +AF+ I+E SWS++I GY Q G F +A+ FK ++ +
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 311 NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
+SF ++I + + L G Q+ A A+K S ++++ MY KCG +D A + F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 371 LTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVK 429
++ D I+WT +I Y HG ++V++F++MLR + P+ V ++ +L+ACSHSG++K
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
EG++ + +G+ P ++HY C++ + RAG L+EA +I +MP +P+ W+TLL
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491
Query: 490 CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
C H ++E + +D + A YV M NL+ AG W+E R++ + L+KE
Sbjct: 492 CRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 316 TNIFQACS--AISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI 373
+I + C+ +SD G QVH +K G L + +I MY KC + AY+ F ++
Sbjct: 10 VSILRVCTRKGLSD--QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 374 EKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
+ + ++W+A++ + +G + ++ LF +M R G+ PN TF L AC +++G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
Q + +K G + ++ N ++ +YS+ G + EA ++ R + + +SW ++ G
Sbjct: 128 Q-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 328 bits (840), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 277/504 (54%), Gaps = 2/504 (0%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
I N +L MY C F A ++F M D +W +IS Y + G M ++ F M+ G
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+ P + F +LL S + LE KQ+H ++R + D+ + + L + Y KC + A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
++ + + V T ++ GY + D+L +F ++K + +E +L L
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIIT 285
+ GR++H + +K G ++ ++G ++D Y+KCGR A + FE + + + SW+++IT
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
QS A++ F+ + G+ + + AC+ + +G +H IK L
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKML 404
+ ES +I MY+KCG L A F T+++ + ++W +II A HGK +++ LFH+M+
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 405 -RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
+SG+RP+ +TF+ ++++C H G V EG +F SM+ YG+ P +HY C++ ++ RAG
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
L EA E ++SMPF PD W TLLG C H+N+E A +A+ K+ LDP +S YV + N
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNA 755
Query: 524 HALAGNWDEAAQYRKMMAERNLRK 547
HA A W+ + R +M ER ++K
Sbjct: 756 HANAREWESVTKVRSLMKEREVQK 779
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 264/547 (48%), Gaps = 18/547 (3%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
+S D ++ L K C L + + + + N+F+ + +++ Y +
Sbjct: 134 VSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPS 193
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
++FD ++ +D W +++ YA+ G + I+ FS M I P++ F +L A
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
++LG QLH ++ G + SI+ +L +MY KCG D A M+ + V ++
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
GY Q+ ++L F +MI GV D FS +L + + +++ +QIH Y ++ +
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
++ + + L+D Y KC A F + ++A+I+GY +G + +LE F+ +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+ N +I + L G ++H IKKG + A+I MY+KCG+++
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 365 YAYQAFLTIEKPDTIAWTAII--CAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
AY+ F + K D ++W ++I CA + S A+ +F +M SG+ + V+ L+AC
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQS-DNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
++ GK M +K+ + + + +I +Y++ G L+ A+ + ++M E + +S
Sbjct: 553 ANLPSESFGKAIHGFM-IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVS 610
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFH-------LDPLDSATYVTMFNLHALAGNWDEAAQ 535
W +++ C +H L+ + +FH + P D T++ + + G+ DE +
Sbjct: 611 WNSIIAACGNHGKLKDSLC----LFHEMVEKSGIRP-DQITFLEIISSCCHVGDVDEGVR 665
Query: 536 YRKMMAE 542
+ + M E
Sbjct: 666 FFRSMTE 672
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/576 (24%), Positives = 256/576 (44%), Gaps = 42/576 (7%)
Query: 10 PRSYKHLFKMCGMLGALSDGKLFHNRL-QRMANGNKFIDNCILQMYCDCKSFTAAERVFD 68
PR L + C L GK H L +G+ + D IL MY C SF+ ++F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 69 EMVDR--DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
+ R + W +IIS++ G + A+ + +ML G+ P S F L+ +
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
+ L + +G + + ++L Y++ G +D +++ K+ V ++ GY
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ + F+ M + + + F VL CA+ I+ G Q+H V G++ E
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
S+ L+ YSKCGRF+ A + F + + +W+ +I+GY QSG +++L F + S
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
GV+ ++ ++++ + S +L Y Q+H ++ + + SA+I Y KC + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
F D + +TA+I Y ++G +++++F +++ + PN +T + +L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
+K G++ L +K G D + +I +Y++ G + A E+ + + D +SW +
Sbjct: 455 LALKLGRE-LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNS 512
Query: 486 LLGGCWSHRNLETA-----------------SIAA-------------GKIFH----LDP 511
++ C N A SI+A GK H
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHS 572
Query: 512 LDSATY--VTMFNLHALAGNWDEAAQYRKMMAERNL 545
L S Y T+ +++A GN A K M E+N+
Sbjct: 573 LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 291/547 (53%), Gaps = 10/547 (1%)
Query: 8 IDPRSYK--HLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
++P Y +L K+CG L GK H L + + + F + MY C+ A
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
+VFD M +RDL SW TI++ Y++ G A+ + M + +KPS F T++ S
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS---FITIVSVLPAVS 247
Query: 125 ALEL---GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
AL L GK++H +R GF + V+I T L +MY KCG L+ A + M +N V+
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ Y Q +A+L+F KM+ EGVK + L ACA L D+ GR IH SV+LG
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
L+ VSV L+ Y KC + A F ++ SW+A+I G+ Q+GR AL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+RS+ V ++F Y ++ A + +S + +H ++ L + + +A++ MY+KCG
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLN 420
+ A F + + W A+I Y HG + A++LF +M + ++PN VTF+ +++
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
ACSHSGLV+ G + M Y ++ ++DHY M+ + RAG L EA + I MP +P
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
+ +LG C H+N+ A AA ++F L+P D +V + N++ A W++ Q R M
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 541 AERNLRK 547
+ LRK
Sbjct: 668 LRQGLRK 674
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 232/450 (51%), Gaps = 3/450 (0%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
F ++ ++C S A RVF+ + + + T++ +A+ + A++ F RM
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
++P F LL D + L +GK++H L++ GF+ D+ T L NMY KC ++ A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
++M ++ V+ ++ GY+Q AL + M +E +K VL A +AL
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
+ I+ G++IH Y+++ G +S V++ T LVD Y+KCG E A Q F+ + E N SW+++I
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
Y Q+ +A+ F+ + +GV AC+ + DL G +H +++ GL
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKM 403
+ +S +++I+MY KC ++D A F ++ ++W A+I +A +G+ +A+ F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
V+P+ T++ ++ A + + K ++ + ++ +D + ++ +Y++ G
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAK-WIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
+ A +I M E +W ++ G +H
Sbjct: 489 IMIA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 190/368 (51%), Gaps = 5/368 (1%)
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
S+L+ +Q+ + + G + +T L +++ + G +D A + +K V ++
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
G+ + AL F +M + V+ + F+ +LK C ++ G++IH VK G
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
++ T L + Y+KC + A + F+ + E + SW+ I+ GY Q+G ALE K++
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
+ + + ++ A SA+ + G ++H A++ G ++ +A++ MY+KCG L
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 364 DYAYQAFLTIEKPDTIAWTAIICAYAYH-GKSEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
+ A Q F + + + ++W ++I AY + EA+ +F KML GV+P V+ +G L+AC
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL- 481
+ G ++ G+ F+ +SV+ G+D + N +I +Y + + A M + + TL
Sbjct: 348 ADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLV 404
Query: 482 SWKTLLGG 489
SW ++ G
Sbjct: 405 SWNAMILG 412
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 304/591 (51%), Gaps = 71/591 (12%)
Query: 25 ALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISA 84
AL KLF R A F N +L Y + FD++ RD SW T+I
Sbjct: 65 ALHARKLFDEMPLRTA----FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 85 YAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD 144
Y G AIR+ M+ GI+P+ +L S A +E GK++HS ++++G +
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 145 VSIETTLSNMYIKCG-------------------W------------LDGAEVATNKMTT 173
VS+ +L NMY KCG W +D A +M
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGV-KLDEFVFSIVLKACAALKDINTGRQ 232
++ V ++ G+ Q AL +F+KM+++ + D F + VL ACA L+ + G+Q
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 233 IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFE---------------------- 270
IHS+ V G + V L+ YS+CG E A + E
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 271 -----------SIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIF 319
S+++ + +W+A+I GY Q G + +A+ F+++ G NS+ +
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 320 QACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDT 378
S+++ L +G Q+H A+K G + +S +A+ITMY+K G + A +AF I + DT
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 379 IAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDS 437
++WT++I A A HG +E A++LF ML G+RP+ +T++G+ +AC+H+GLV +G+Q+ D
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 438 MSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLE 497
M + PT+ HY CM+ ++ RAGLLQEA E I MP EPD ++W +LL C H+N++
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 498 TASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
+AA ++ L+P +S Y + NL++ G W+EAA+ RK M + ++KE
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKE 651
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 44/243 (18%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEM-VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
+ N ++ MY + T+A R FD + +RD SW ++I A A+ GH A+ LF ML
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG-FTADVSIETTLSNMYIKCGWLDG 163
G++P + + + + G+Q + + +S + +++ + G L
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 164 AEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
A+ KM ++ D + +L AC
Sbjct: 570 AQEFIEKMP----------------------------------IEPDVVTWGSLLSACRV 595
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVG-TPLVDFYSKCGRFEAACQAFES-----IREPND 277
K+I+ G+ + L LE E S + L + YS CG++E A + +S +++
Sbjct: 596 HKNIDLGKV--AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQG 653
Query: 278 FSW 280
FSW
Sbjct: 654 FSW 656
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 107/234 (45%), Gaps = 11/234 (4%)
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG 349
+GRF L + I+S G++ + ++ N+ S ++ ++ + + +
Sbjct: 28 NGRFTAQLVHCRVIKS-GLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSW--- 83
Query: 350 ESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGV 408
+ +++ YSK G +D + F + + D+++WT +I Y G+ +A+++ M++ G+
Sbjct: 84 -NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI 142
Query: 409 RPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL 468
P T +L + + + ++ GK+ + S VK G+ + N ++ +Y++ G A
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKK-VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 469 EMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFN 522
+ M D SW ++ H + +A + + D T+ +M +
Sbjct: 202 FVFDRMVVR-DISSWNAMIA---LHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 284/501 (56%), Gaps = 5/501 (0%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATI-ISAYAEEGHMIGAIRLFSRMLDLGIKP 108
++ MY +E+VF+++ D + + I+++++ AIRLF+RML G++
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRT 451
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
C+LL L LGKQ+H ++ G D+++ ++L +Y KCG L+ +
Sbjct: 452 DEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLF 508
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
+ K+ ++ G+ + +A+ LF++M+ +G DE + VL C++ +
Sbjct: 509 QGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLP 568
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC 288
G++IH Y+++ G++ + +G+ LV+ YSKCG + A Q ++ + E + S S++I+GY
Sbjct: 569 RGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYS 628
Query: 289 QSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLS 348
Q G F+++ G ++SF ++I +A + + GAQVHA K GL S
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS 688
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSG 407
S+++TMYSK G +D +AF I PD IAWTA+I +YA HGK+ EA+++++ M G
Sbjct: 689 VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 408 VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
+P+ VTF+G+L+ACSH GLV+E L+SM YG++P HY CM+ R+G L+EA
Sbjct: 749 FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREA 808
Query: 468 LEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALA 527
I +M +PD L W TLL C H +E +AA K L+P D+ Y+++ N+ A
Sbjct: 809 ESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEV 868
Query: 528 GNWDEAAQYRKMMAERNLRKE 548
G WDE + RK+M ++KE
Sbjct: 869 GEWDEVEETRKLMKGTGVQKE 889
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 266/584 (45%), Gaps = 55/584 (9%)
Query: 3 EACISI---DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
E C+ D +Y + C L L GK+ R+ + + F+ I+ +Y C
Sbjct: 241 EMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGH 300
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A VF + + + SW ++S Y + A+ +F M G++ ++ +++ +
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
PS + Q+H+ + + GF D S+ L +MY K G +D +E +
Sbjct: 361 CGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 180 TGLMV-GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
+M+ ++Q+ + A+ LF +M++EG++ DEF +L + L +N G+Q+H Y++
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTL 477
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
K GL +++VG+ L YSKCG E + + F+ I ++ W+++I+G+ + G +A+
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG 537
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
F + G + + CS+ L G ++H ++ G+ + + SA++ MYS
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS 597
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIG 417
KCG L A Q + + + D ++ +++I Y+ HG + LF M+ SG ++
Sbjct: 598 KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISS 657
Query: 418 LLNACSHSGLVKEGKQF------------------LDSMSVKYG-VD-----------PT 447
+L A + S G Q L +M K+G +D P
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 448 IDHYNCMIGVYSRAGLLQEALE---MIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
+ + +I Y++ G EAL+ +++ F+PD +++ +L C SH L S
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC-SHGGLVEES---- 772
Query: 505 KIFHLDPL--------DSATYVTMFNLHALAGNWDEAAQYRKMM 540
FHL+ + ++ YV M + +G EA + M
Sbjct: 773 -YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNM 815
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 214/436 (49%), Gaps = 13/436 (2%)
Query: 17 FKMCGMLGAL---SDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVD 72
F +C +L L + GK H L+ + + + + +Y C S + ++F +
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 73 RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQL 132
+D WA++IS + E G++ AI LFS MLD G P S +L + +L GK++
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 133 HSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRH 192
H +R G + + + L NMY KCG L A +++ + V+C+ L+ GY+Q
Sbjct: 574 HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLI 633
Query: 193 TDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPL 252
D LLF M+ G +D F S +LKA A + + G Q+H+Y K+GL +E SVG+ L
Sbjct: 634 QDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSL 693
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
+ YSK G + C+AF I P+ +W+A+I Y Q G+ ++AL+ + ++ KG +
Sbjct: 694 LTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDK 753
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQAF 370
+ + ACS LV + H +++ K G+ M+ + G+L A ++F
Sbjct: 754 VTFVGVLSACSH-GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREA-ESF 811
Query: 371 LTIE--KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG-- 426
+ KPD + W ++ A HG+ E K+ K +A +I L N + G
Sbjct: 812 INNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEW 871
Query: 427 -LVKEGKQFLDSMSVK 441
V+E ++ + V+
Sbjct: 872 DEVEETRKLMKGTGVQ 887
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 223/449 (49%), Gaps = 12/449 (2%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
F+ +L Y + S A ++FD + D+ S +IS Y + ++R FS+M L
Sbjct: 85 FLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFL 144
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G + + + +++ + + A + + I++G+ +E+ L +++ K + A
Sbjct: 145 GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDA 204
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
+ N ++ G + + LF +M K D + +S VL ACA+L
Sbjct: 205 YKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL 264
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
+ + G+ + + +K G E +V V T +VD Y+KCG A + F I P+ SW+ ++
Sbjct: 265 EKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+GY +S ALE FK +R GV +N+ T++ AC S + +QVHA K G
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFL---TIEKPDTIAWTAIICAYAYHGKS-EAVKLF 400
S +A+I+MYSK G +D + Q F I++ + + +I +++ K +A++LF
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLF 441
Query: 401 HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSR 460
+ML+ G+R + + LL+ L GKQ + ++K G+ + + + +YS+
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQ-VHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 461 AGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
G L+E+ ++ + +PF+ D W +++ G
Sbjct: 498 CGSLEESYKLFQGIPFK-DNACWASMISG 525
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 4/339 (1%)
Query: 126 LELGKQLHSQLIRIGFTA-DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
L K L + L+R DV + +L + Y G + A + + + V+C ++
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
GY Q ++L F+KM G + +E + V+ AC+AL+ + +++K+G
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
V + L+D +SK RFE A + F N + W+ II G ++ + + F +
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+S+ Y+++ AC+++ L +G V A IK G +A++ +Y+KCG +
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC-TAIVDLYAKCGHMA 302
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A + F I P ++WT ++ Y + A+++F +M SGV N T +++AC
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
+V E Q + + K G +I +YS++G
Sbjct: 363 RPSMVCEASQ-VHAWVFKSGFYLDSSVAAALISMYSKSG 400
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 124/251 (49%), Gaps = 8/251 (3%)
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
L +V + L+ +YS G A + F++I +P+ S + +I+GY Q F+++L F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ G N Y ++ ACSA+ ++ V IK G Y ESA+I ++SK
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLRSGVRPNAVTFIGLLN 420
+ + AY+ F + W II + AV LFH+M +P++ T+ +L
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC--MIGVYSRAGLLQEALEMIRSMPFEP 478
AC+ ++ GK + + +K G + D + C ++ +Y++ G + EA+E+ +P P
Sbjct: 260 ACASLEKLRFGK-VVQARVIKCGAE---DVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NP 314
Query: 479 DTLSWKTLLGG 489
+SW +L G
Sbjct: 315 SVVSWTVMLSG 325
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 290/506 (57%), Gaps = 7/506 (1%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ N ++ +Y C + A +FD+ + + +W ++IS YA G + A+ +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC-GWLDGA 164
++ S S F +++ A+ L +QLH +++ GF D +I T L Y KC LD
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
+ N V+ T ++ G+ Q +A+ LF++M ++GV+ +EF +S++L A +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
+ ++H+ VK E +VGT L+D Y K G+ E A + F I + + +WSA++
Sbjct: 411 ----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI-SDLVYGAQVHADAIKKGL 343
GY Q+G + A++ F + G+ N F +++I C+A + + G Q H AIK L
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHK 402
L SA++TMY+K G ++ A + F + D ++W ++I YA HG++ +A+ +F +
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 403 MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
M + V+ + VTFIG+ AC+H+GLV+EG+++ D M + PT +H +CM+ +YSRAG
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 463 LLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFN 522
L++A+++I +MP + W+T+L C H+ E +AA KI + P DSA YV + N
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 706
Query: 523 LHALAGNWDEAAQYRKMMAERNLRKE 548
++A +G+W E A+ RK+M ERN++KE
Sbjct: 707 MYAESGDWQERAKVRKLMNERNVKKE 732
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 260/499 (52%), Gaps = 10/499 (2%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ ++ Y +F +VFDEM +R++ +W T+IS YA + LF RM + G
Sbjct: 130 VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+P+S F LG A+ G Q+H+ +++ G + + +L N+Y+KCG + A
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
+ +K K+ V ++ GY +AL +F M V+L E F+ V+K CA LK
Sbjct: 250 ILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLK 309
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAII 284
++ Q+H VK G + ++ T L+ YSKC A + F+ I N SW+A+I
Sbjct: 310 ELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMI 369
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+G+ Q+ ++A++ F ++ KGV N F Y+ I A IS ++VHA +K
Sbjct: 370 SGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYE 425
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKM 403
+ + +A++ Y K GK++ A + F I+ D +AW+A++ YA G++E A+K+F ++
Sbjct: 426 RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL 485
Query: 404 LRSGVRPNAVTFIGLLNACSHSGL-VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
+ G++PN TF +LN C+ + + +GKQF ++K +D ++ + ++ +Y++ G
Sbjct: 486 TKGGIKPNEFTFSSILNVCAATNASMGQGKQF-HGFAIKSRLDSSLCVSSALLTMYAKKG 544
Query: 463 LLQEALEMIRSMPFEPDTLSWKTLLGGCWSH-RNLETASIAAGKIFHLDPLDSATYVTMF 521
++ A E+ + E D +SW +++ G H + ++ + +D T++ +F
Sbjct: 545 NIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 522 NLHALAGNWDEAAQYRKMM 540
AG +E +Y +M
Sbjct: 604 AACTHAGLVEEGEKYFDIM 622
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 251/521 (48%), Gaps = 43/521 (8%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A +FD+ RD S+ +++ ++ +G A RLF + LG++ SIF ++L A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
G+QLH Q I+ GF DVS+ T+L + Y+K ++M +N V T L
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ GY + + + L LF +M EG + + F F+ L A G Q+H+ VK GL
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
+ + V L++ Y KCG A F+ + +W+++I+GY +G +AL F +
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+R V L+ + ++ + C+ + +L + Q+H +K G + + +A++ YSKC
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 363 LDYAYQAFLTIE-KPDTIAWTAIICAYAYH-GKSEAVKLFHKMLRSGVRPNAVTFIGLLN 420
+ A + F I + ++WTA+I + + GK EAV LF +M R GVRPN T+ +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 421 ACS-------HSGLVKE--------GKQFLDSMSVKYGV------------DPTIDHYNC 453
A H+ +VK G LD+ VK G D I ++
Sbjct: 406 ALPVISPSEVHAQVVKTNYERSSTVGTALLDAY-VKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 454 MIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH-- 508
M+ Y++ G + A++M + +P+ ++ ++L C + AS+ GK FH
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA----TNASMGQGKQFHGF 520
Query: 509 --LDPLDSATYVT--MFNLHALAGNWDEAAQYRKMMAERNL 545
LDS+ V+ + ++A GN + A + K E++L
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 285/546 (52%), Gaps = 6/546 (1%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAERVF 67
D +Y + K G L ++ G + H R+ R G +K++ N +L MY + A VF
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
D M +RD+ SW T+IS Y G+M A+ +F M++ + + ++L LE
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYT 187
+G+ +H + + ++ L NMY+KCG +D A ++M ++ + T ++ GYT
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 188 QALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVS 247
+ +AL L M EGV+ + + ++ C +N G+ +H ++V+ + S++
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
+ T L+ Y+KC R + + F + + WSAII G Q+ AL FK +R +
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
V N ++ A +A++DL +H K G + L + ++ +YSKCG L+ A+
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 368 QAFLTIEK----PDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNAC 422
+ F I++ D + W A+I Y HG A+++F +M+RSGV PN +TF LNAC
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
SHSGLV+EG M Y +HY C++ + RAG L EA +I ++PFEP +
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
W LL C +H N++ +AA K+F L+P ++ YV + N++A G W + + R MM
Sbjct: 596 WGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMEN 655
Query: 543 RNLRKE 548
LRK+
Sbjct: 656 VGLRKK 661
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 229/489 (46%), Gaps = 7/489 (1%)
Query: 11 RSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
+ Y+ L ++S K H + + I + + Y C T A ++F+EM
Sbjct: 16 KQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEM 75
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK--PSSSIFCTLLGSFADPSALEL 128
L S+ +I Y EG AI +F RM+ G+K P + + + + +++L
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
G +H +++R F D ++ L MY+ G ++ A + M ++ ++ ++ GY +
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
DAL++F M+ E V LD +L C LKD+ GR +H + L ++ V
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
LV+ Y KCGR + A F+ + + +W+ +I GY + G + ALE + ++ +GV
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
N+ ++ C + G +H A+++ + + E+++I+MY+KC ++D ++
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 369 AFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
F K T W+AII + S+A+ LF +M R V PN T LL A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWK 484
+++ + K G ++D ++ VYS+ G L+ A ++ I+ D + W
Sbjct: 436 LRQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 485 TLLGGCWSH 493
L+ G H
Sbjct: 495 ALISGYGMH 503
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 193/423 (45%), Gaps = 34/423 (8%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKS 59
M + +D + + +CG L L G+ H ++ G+K + N ++ MY C
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A VFD M RD+ +W +I+ Y E+G + A+ L M G++P++ +L+
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSV 328
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
D + GK LH +R +D+ IET+L +MY KC +D + + +
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
+ ++ G Q +DAL LF +M +E V+ + + +L A AAL D+ IH Y K
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 240 LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS----WSAIITGYCQSGRFDK 295
G S + T LV YSKCG E+A + F I+E + W A+I+GY G
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL-------- 347
AL+ F + GV N +T+ ACS H+ +++GL +
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACS-----------HSGLVEEGLTLFRFMLEHYKT 557
Query: 348 ----SGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYH-----GKSEAV 397
+ + ++ + + G+LD AY TI +P + W A++ A H G+ A
Sbjct: 558 LARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAAN 617
Query: 398 KLF 400
KLF
Sbjct: 618 KLF 620
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 290/542 (53%), Gaps = 4/542 (0%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFD 68
D + K C L L +GK H +L ++ + + + +L MY C +A +VF+
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFN 200
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
++ R++ W ++I+ Y + + LF+RM + + + + TL+ + SAL
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
GK H L++ G + T+L +MY+KCG + A N+ + + V T ++VGYT
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTH 320
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
+AL LF KM +K + + VL C ++++ GR +H S+K+G+ + +V
Sbjct: 321 NGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNV 379
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
LV Y+KC + A FE E + +W++II+G+ Q+G +AL F + S+ V
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE--SAMITMYSKCGKLDYA 366
N ++F AC+++ L G+ +HA ++K G + S +A++ Y+KCG A
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
F TIE+ +TI W+A+I Y G + +++LF +ML+ +PN TF +L+AC H+
Sbjct: 500 RLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHT 559
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
G+V EGK++ SM Y P+ HY CM+ + +RAG L++AL++I MP +PD +
Sbjct: 560 GMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGA 619
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
L GC H + I K+ L P D++ YV + NL+A G W++A + R +M +R L
Sbjct: 620 FLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGL 679
Query: 546 RK 547
K
Sbjct: 680 SK 681
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 212/430 (49%), Gaps = 7/430 (1%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A VFD++ + D + W ++ Y + ++L+ ++ G + +F L + +
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
L+ GK++H QL+++ + D + T L +MY KCG + A N +T +N V T +
Sbjct: 155 LQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ GY + + L+LF +M + V +E+ + ++ AC L ++ G+ H VK G+
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
E + T L+D Y KCG A + F + W+A+I GY +G ++AL F+
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
++ + N ++ C I +L G VH +IK G+ + +A++ MY+KC +
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQ 392
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
A F + D +AW +II ++ +G EA+ LFH+M V PN VT L +A
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 422 CSHSGLVKEGKQFLDSMSVKYG--VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
C+ G + G L + SVK G ++ ++ Y++ G Q A +I E +
Sbjct: 453 CASLGSLAVGSS-LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKN 510
Query: 480 TLSWKTLLGG 489
T++W ++GG
Sbjct: 511 TITWSAMIGG 520
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 186/363 (51%), Gaps = 9/363 (2%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
+Q H L G D+SI T L ++Y G+ A + +++ + ++ Y
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
+ + L+ ++K G + D+ VFS LKAC L+D++ G++IH VK+ V V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VL 179
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
T L+D Y+KCG ++A + F I N W+++I GY ++ ++ L F +R V+
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
N + Y + AC+ +S L G H +K G+ ++++ MY KCG + A +
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 370 FLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F D + WTA+I Y ++G +EA+ LF KM ++PN VT +L+ C GL+
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLI 356
Query: 429 K--EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
+ E + + +S+K G+ T + N ++ +Y++ ++A + + M E D ++W ++
Sbjct: 357 ENLELGRSVHGLSIKVGIWDT-NVANALVHMYAKCYQNRDA-KYVFEMESEKDIVAWNSI 414
Query: 487 LGG 489
+ G
Sbjct: 415 ISG 417
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 48/369 (13%)
Query: 216 IVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
++L C +I++ RQ H GL ++S+ T LV Y G + A F+ I EP
Sbjct: 49 LLLSKCT---NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
+ + W ++ YC + + ++ + + G + V++ +AC+ + DL G ++H
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 336 ADAIKKGLVQYLSGESAMIT----MYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
LV+ S ++ ++T MY+KCG++ A++ F I + + WT++I Y +
Sbjct: 166 CQ-----LVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 392 GK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPT--- 447
E + LF++M + V N T+ L+ AC+ + +GK F + VK G++ +
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL-VKSGIELSSCL 279
Query: 448 ----IDHY------------------------NCMIGVYSRAGLLQEALEMIRSMP---F 476
+D Y MI Y+ G + EAL + + M
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 477 EPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQY 536
+P+ ++ ++L GC NLE G + D+ + +++A +A
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYV 399
Query: 537 RKMMAERNL 545
+M +E+++
Sbjct: 400 FEMESEKDI 408
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 287/559 (51%), Gaps = 24/559 (4%)
Query: 13 YKHLFKMCGMLGALS-DGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMV 71
Y + + C L L G+L + L+ + + L MY C + A+ +FD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQ 131
+ + S+ +I+ Y++E H A+ LF R++ G+ + + A L G Q
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
++ I+ + DV + +MY KC L A ++M ++AV+ ++ + Q +
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
+ L LF M++ ++ DEF F +LKAC + G +IHS VK G+ S SVG
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 252 LVDFYSKCGRFEAACQ-------------AFESIREPND-------FSWSAIITGYCQSG 291
L+D YSKCG E A + E + + ++ SW++II+GY
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
+ + A F + G+ + F Y + C+ ++ G Q+HA IKK L + S
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICS 642
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRP 410
++ MYSKCG L + F + D + W A+IC YA+HGK EA++LF +M+ ++P
Sbjct: 643 TLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKP 702
Query: 411 NAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
N VTFI +L AC+H GL+ +G ++ M YG+DP + HY+ M+ + ++G ++ ALE+
Sbjct: 703 NHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 762
Query: 471 IRSMPFEPDTLSWKTLLGGCWSHR-NLETASIAAGKIFHLDPLDSATYVTMFNLHALAGN 529
IR MPFE D + W+TLLG C HR N+E A A + LDP DS+ Y + N++A AG
Sbjct: 763 IREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGM 822
Query: 530 WDEAAQYRKMMAERNLRKE 548
W++ + R+ M L+KE
Sbjct: 823 WEKVSDLRRNMRGFKLKKE 841
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/563 (26%), Positives = 267/563 (47%), Gaps = 26/563 (4%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFID-NCILQMYCDCKS 59
M I D R++ + K+C L S G H + R+ + + +L MY K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
F + RVF + +++ SW+ II+ + + A++ F M + S SI+ ++L S
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
A S L LG QLH+ ++ F AD + T +MY KC + A++ + N +
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
++ GY+Q ALLLF +++ G+ DE S V +ACA +K ++ G QI+ ++K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 240 LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET 299
L +V V +D Y KC A + F+ +R + SW+AII + Q+G+ + L
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 300 FKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSK 359
F ++ + + F + +I +AC+ S L YG ++H+ +K G+ S ++I MYSK
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 360 CGKLDYA---YQAFL-------TIEKPDT----------IAWTAIICAYAYHGKSE-AVK 398
CG ++ A + F T+E+ + ++W +II Y +SE A
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVY 458
LF +M+ G+ P+ T+ +L+ C++ GKQ + + +K + + + ++ +Y
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ-IHAQVIKKELQSDVYICSTLVDMY 648
Query: 459 SRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH-RNLETASIAAGKIFHLDPLDSATY 517
S+ G L ++ M D ++W ++ G H + E + I + T+
Sbjct: 649 SKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Query: 518 VTMFNLHALAGNWDEAAQYRKMM 540
+++ A G D+ +Y MM
Sbjct: 708 ISILRACAHMGLIDKGLEYFYMM 730
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/598 (26%), Positives = 276/598 (46%), Gaps = 59/598 (9%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNK---FIDNCILQMYCDCKSFTAA 63
S+ ++ +FK C GAL GK H + + +G + F+ NC+LQ+Y + + F +A
Sbjct: 45 SVSTTNFSFVFKECAKQGALELGKQAHAHM--IISGFRPTTFVLNCLLQVYTNSRDFVSA 102
Query: 64 ERVFDEMVDRDLFSWATII-------------------------------SAYAEEGHMI 92
VFD+M RD+ SW +I S Y + G +
Sbjct: 103 SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162
Query: 93 GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
+I +F M GI+ F +L + LG Q+H ++R+G DV + L
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALL 222
Query: 153 NMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEF 212
+MY K + + KN+V+ + ++ G Q + AL F +M K + +
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
+++ VL++CAAL ++ G Q+H++++K ++ V T +D Y+KC + A F++
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGA 332
N S++A+ITGY Q KAL F + S G+ + + +F+AC+ + L G
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 333 QVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG 392
Q++ AIK L + +A I MY KC L A++ F + + D ++W AII A+ +G
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 393 KS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY 451
K E + LF MLRS + P+ TF +L AC+ G + G + S+ VK G+
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASNSSVG 520
Query: 452 NCMIGVYSRAGLLQEA-------------------LEMIRSMPFEPDTLSWKTLLGGCWS 492
+I +YS+ G+++EA LE + + + +SW +++ G
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 493 HRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
E A + ++ + D TY T+ + A + Q + ++ L+ +V
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 638
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 200/425 (47%), Gaps = 36/425 (8%)
Query: 98 FSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTA-------------- 143
F+ L+ S++ F + A ALELGKQ H+ +I GF
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 144 -----------------DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
DV + N Y K + A N M ++ V+ ++ GY
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
Q ++ +F M +EG++ D F+I+LK C+ L+D + G QIH V++G +++V
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
+ L+D Y+K RF + + F+ I E N SWSAII G Q+ AL+ FK ++
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
++ +Y ++ ++C+A+S+L G Q+HA A+K +A + MY+KC + A
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 335
Query: 367 YQAFLTIEKPDTIAWTAIICAYAY--HGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
F E + ++ A+I Y+ HG +A+ LFH+++ SG+ + ++ G+ AC+
Sbjct: 336 QILFDNSENLNRQSYNAMITGYSQEEHG-FKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWK 484
+ EG Q +++K + + N I +Y + L EA + M D +SW
Sbjct: 395 VKGLSEGLQIY-GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWN 452
Query: 485 TLLGG 489
++
Sbjct: 453 AIIAA 457
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/526 (33%), Positives = 280/526 (53%), Gaps = 9/526 (1%)
Query: 30 KLFHNRLQRMANGNKFIDNCILQMYCDCKSF---TAAERVFDEMVDRDLFSWATIISAYA 86
K H RL + G +F I ++ SF T A +VFD++ +F W II Y+
Sbjct: 38 KQIHARL--LVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 87 EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVS 146
H A+ ++S M + P S F LL + + S L++G+ +H+Q+ R+GF ADV
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 147 IETTLSNMYIKCGWLDGAEVATN--KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK 204
++ L +Y KC L A + + V+ T ++ Y Q +AL +F++M K
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 205 EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEA 264
VK D VL A L+D+ GR IH+ VK+GLE E + L Y+KCG+
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 265 ACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSA 324
A F+ ++ PN W+A+I+GY ++G +A++ F + +K V ++ T+ AC+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 325 ISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAI 384
+ L ++ + + SA+I M++KCG ++ A F D + W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 385 ICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYG 443
I Y HG++ EA+ L+ M R GV PN VTF+GLL AC+HSG+V+EG F + M+ +
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHK 454
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAA 503
++P HY C+I + RAG L +A E+I+ MP +P W LL C HR++E AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 504 GKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
++F +DP ++ YV + NL+A A WD A+ R M E+ L K+V
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 198/409 (48%), Gaps = 9/409 (2%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
M A +S D ++ HL K C L L G+ H ++ R+ + + F+ N ++ +Y C+
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 60 FTAAERVFD--EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
+A VF+ + +R + SW I+SAYA+ G + A+ +FS+M + +KP ++L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV 177
+F L+ G+ +H+ ++++G + + +L+ MY KCG + A++ +KM + N +
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
++ GY + +A+ +F +MI + V+ D + + ACA + + R ++ Y
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL 297
+ +V + + L+D ++KCG E A F+ + + WSA+I GY GR +A+
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
++ + GV N + + AC+ + G + + +I +
Sbjct: 410 SLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLL 469
Query: 358 SKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYH-----GKSEAVKLF 400
+ G LD AY+ + +P W A++ A H G+ A +LF
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 298/548 (54%), Gaps = 6/548 (1%)
Query: 8 IDPRSYK--HLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAE 64
I P +Y +FK L + + G+ H + +M++ G+ ++D ++ MYC
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSS--IFCTLLGSFAD 122
+VF M +R+ ++W+T++S YA G + AI++F+ L + S S +F +L S A
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
+ LG+Q+H I+ G V++ L MY KC L+ A + +N++ + +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ GY+Q +A+ LF++M G+K E+ VL AC+ + + G+Q+HS+ +KLG
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
E + T LVD Y+K G A + F+ ++E + W+++I+GY Q+ ++AL ++
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+++ G+I N ++ +ACS+++ L G QVH IK G + SA+ TMYSKCG
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNA 421
L+ F D ++W A+I +++G+ EA++LF +ML G+ P+ VTF+ +++A
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL 481
CSH G V+ G + + MS + G+DP +DHY CM+ + SRAG L+EA E I S +
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLC 593
Query: 482 SWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
W+ LL C +H E A K+ L +S+TYV + ++ G + + K M
Sbjct: 594 LWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMR 653
Query: 542 ERNLRKEV 549
+ KEV
Sbjct: 654 ANGVSKEV 661
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 237/452 (52%), Gaps = 16/452 (3%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGA---IRLFSRMLDL 104
N ++ Y C A +F+ ++ +D+ SW ++I+ Y++ G + + ++LF M
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 105 GIKPSSSIFCTLLGSFADPSALE---LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL 161
I P++ TL G F S+L+ +G+Q H+ ++++ D+ ++T+L MY K G +
Sbjct: 113 DILPNAY---TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLV 169
Query: 162 DGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALL---LFAKMIKEGVKLDEFVFSIVL 218
+ M +N + ++ GY R +A+ LF + +EG D +VF+ VL
Sbjct: 170 EDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVL 228
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
+ AA + GRQIH ++K GL V++ LV YSKC AC+ F+S + N
Sbjct: 229 SSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
+WSA++TGY Q+G +A++ F + S G+ + + + ACS I L G Q+H+
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAV 397
+K G ++L +A++ MY+K G L A + F +++ D WT++I Y + + EA+
Sbjct: 349 LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL 408
Query: 398 KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGV 457
L+ +M +G+ PN T +L ACS ++ GKQ + ++K+G + + + +
Sbjct: 409 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTM 467
Query: 458 YSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
YS+ G L++ + R P D +SW ++ G
Sbjct: 468 YSKCGSLEDGNLVFRRTP-NKDVVSWNAMISG 498
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 214/402 (53%), Gaps = 8/402 (1%)
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+ P +S L + L G+ +H Q+IR G + + L N Y KCG L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDA---LLLFAKMIKEGVKLDEFVFSIVLKACA 222
N + K+ V+ L+ GY+Q + + + LF +M + + + + + + KA +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSA 282
+L+ GRQ H+ VK+ ++ V T LV Y K G E + F + E N ++WS
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 283 IITGYCQSGRFDKALETFK-NIRSKGVILNS-FVYTNIFQACSAISDLVYGAQVHADAIK 340
+++GY GR ++A++ F +R K +S +V+T + + +A + G Q+H IK
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 341 KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKL 399
GL+ +++ +A++TMYSKC L+ A + F + ++I W+A++ Y+ +G+S EAVKL
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 400 FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
F +M +G++P+ T +G+LNACS ++EGKQ L S +K G + + ++ +Y+
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQ-LHSFLLKLGFERHLFATTALVDMYA 368
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASI 501
+AG L +A + + E D W +L+ G + + E A I
Sbjct: 369 KAGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALI 409
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 280/504 (55%), Gaps = 2/504 (0%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ N +L+ YC+ + A +F+E+ ++D ++ T+I+ Y ++G +I LF +M G
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+PS F +L + LG+QLH+ + GF+ D S+ + + Y K +
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
+ ++M + V+ ++ Y+QA ++ +L F +M G F F+ +L A L
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIIT 285
+ GRQ+H ++ +S + VG LVD Y+KC FE A F+S+ + SW+A+I+
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
GY Q G L+ F +R + + + + +A ++ + L+ G Q+HA I+ G ++
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKML 404
+ S ++ MY+KCG + A Q F + + ++W A+I A+A +G E A+ F KM+
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL 464
SG++P++V+ +G+L ACSH G V++G ++ +MS YG+ P HY CM+ + R G
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 465 QEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPL-DSATYVTMFNL 523
EA +++ MPFEPD + W ++L C H+N A AA K+F ++ L D+A YV+M N+
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
Query: 524 HALAGNWDEAAQYRKMMAERNLRK 547
+A AG W++ +K M ER ++K
Sbjct: 666 YAAAGEWEKVRDVKKAMRERGIKK 689
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 248/510 (48%), Gaps = 10/510 (1%)
Query: 39 MANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLF 98
M + N N ++ + ++A +FD M DR + +W ++ YA H A +LF
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLF 133
Query: 99 SRMLDLG--IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD--VSIETTLSNM 154
+M P F TLL D Q+H+ +++GF + +++ L
Sbjct: 134 RQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKS 193
Query: 155 YIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
Y + LD A V ++ K++V L+ GY + +T+++ LF KM + G + +F F
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
S VLKA L D G+Q+H+ SV G + SVG ++DFYSK R F+ + E
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
+ S++ +I+ Y Q+ +++ +L F+ ++ G +F + + + +S L G Q+
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS 394
H A+ L ++++ MY+KC + A F ++ + T++WTA+I Y G
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 395 EA-VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
A +KLF KM S +R + TF +L A + + GKQ L + ++ G + +
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ-LHAFIIRSGNLENVFSGSG 492
Query: 454 MIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH--LDP 511
++ +Y++ G +++A+++ MP + + +SW L+ + + E A A K+ L P
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 512 LDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
DS + + + + G ++ +Y + M+
Sbjct: 552 -DSVSILGVLTACSHCGFVEQGTEYFQAMS 580
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 293/545 (53%), Gaps = 3/545 (0%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAE 64
+ +D ++ + K L ++ G+ H + + G + + N ++ Y + +A
Sbjct: 191 VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR 250
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
+VFDEM +RD+ SW +II+ Y G + +F +ML GI+ + ++ AD
Sbjct: 251 KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 310
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+ LG+ +HS ++ F+ + TL +MY KCG LD A+ +M+ ++ V+ T ++
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
GY + +A+ LF +M +EG+ D + + VL CA + ++ G+++H + + L
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK-NI 303
++ V L+D Y+KCG + A F +R + SW+ II GY ++ ++AL F +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
K + + AC+++S G ++H ++ G ++++ MY+KCG L
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 364 DYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
A+ F I D ++WT +I Y HG EA+ LF++M ++G+ + ++F+ LL AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
SHSGLV EG +F + M + ++PT++HY C++ + +R G L +A I +MP PD
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
W LL GC H +++ A A K+F L+P ++ YV M N++A A W++ + RK + +
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 543 RNLRK 547
R LRK
Sbjct: 731 RGLRK 735
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 242/501 (48%), Gaps = 19/501 (3%)
Query: 5 CIS----IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQ-----MYC 55
C+S IDPR+ + ++C +L DGK N ++ GN F+ + L MY
Sbjct: 85 CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR----GNGFVIDSNLGSKLSLMYT 140
Query: 56 DCKSFTAAERVFDEM-VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFC 114
+C A RVFDE+ +++ LF W +++ A+ G G+I LF +M+ G++ S F
Sbjct: 141 NCGDLKEASRVFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 199
Query: 115 TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK 174
+ SF+ ++ G+QLH +++ GF S+ +L Y+K +D A ++MT +
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 175 NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIH 234
+ ++ ++ GY L +F +M+ G+++D V CA + I+ GR +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 235 SYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFD 294
S VK E L+D YSKCG ++A F + + + S++++I GY + G
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 379
Query: 295 KALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMI 354
+A++ F+ + +G+ + + T + C+ L G +VH + L + +A++
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 355 TMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSG-VRPNA 412
MY+KCG + A F + D I+W II Y+ + +EA+ LF+ +L P+
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
T +L AC+ +G++ + ++ G N ++ +Y++ G L A M+
Sbjct: 500 RTVACVLPACASLSAFDKGRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA-HMLF 557
Query: 473 SMPFEPDTLSWKTLLGGCWSH 493
D +SW ++ G H
Sbjct: 558 DDIASKDLVSWTVMIAGYGMH 578
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 295/565 (52%), Gaps = 44/565 (7%)
Query: 24 GALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIIS 83
G+L DG+ +M N + N ++ A+ +F M +RD +W +++S
Sbjct: 69 GSLEDGR---QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 84 AYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTA 143
+A+ A+ F+ M G + F ++L + + + + G Q+HS + + F +
Sbjct: 126 GFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS 185
Query: 144 DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI 203
DV I + L +MY KCG ++ A+ ++M +N V+ L+ + Q +AL +F M+
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 204 KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG-LESEVSVGTPLVDFYSKCGRF 262
+ V+ DE + V+ ACA+L I G+++H VK L +++ + VD Y+KC R
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 263 EAACQAFESIR-------------------------------EPNDFSWSAIITGYCQSG 291
+ A F+S+ E N SW+A+I GY Q+G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE- 350
++AL F ++ + V + + NI +AC+ +++L G Q H +K G ++ SGE
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF-KFQSGEE 424
Query: 351 ------SAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKM 403
+++I MY KCG ++ Y F + + D ++W A+I +A +G +EA++LF +M
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
L SG +P+ +T IG+L+AC H+G V+EG+ + SM+ +GV P DHY CM+ + RAG
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
L+EA MI MP +PD++ W +LL C HRN+ A K+ ++P +S YV + N+
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNM 604
Query: 524 HALAGNWDEAAQYRKMMAERNLRKE 548
+A G W++ RK M + + K+
Sbjct: 605 YAELGKWEDVMNVRKSMRKEGVTKQ 629
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 208/458 (45%), Gaps = 73/458 (15%)
Query: 103 DLGIKPSSSIFCTLLGSF--ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW 160
DL SS F LL S + SA+ + + +H+ +I+ GF+ ++ I+ L + Y KCG
Sbjct: 12 DLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGS 70
Query: 161 LDGAEVATNKMTTKNAVA-----------------------------CT--GLMVGYTQA 189
L+ +KM +N CT ++ G+ Q
Sbjct: 71 LEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
R +AL FA M KEG L+E+ F+ VL AC+ L D+N G Q+HS K S+V +G
Sbjct: 131 DRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIG 190
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
+ LVD YSKCG A + F+ + + N SW+++IT + Q+G +AL+ F+ + V
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKG-LVQYLSGESAMITMYSKCGKLD---- 364
+ ++ AC+++S + G +VH +K L + +A + MY+KC ++
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 365 -------------------YAYQA--------FLTIEKPDTIAWTAIICAYAYHGKS-EA 396
YA A F + + + ++W A+I Y +G++ EA
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACS-----HSGLVKEGKQFLDSMSVKYGVDPTIDHY 451
+ LF + R V P +F +L AC+ H G+ + G + I
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 452 NCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
N +I +Y + G ++E + R M E D +SW ++ G
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 304 bits (779), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 246/444 (55%), Gaps = 2/444 (0%)
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
I + TLL L G+ +H+ +++ F D+ + TL NMY KCG L+ A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
KM ++ V T L+ GY+Q R DALL F +M++ G +EF S V+KA AA +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIIT 285
G Q+H + VK G +S V VG+ L+D Y++ G + A F+++ ND SW+A+I
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
G+ + +KALE F+ + G + F Y ++F ACS+ L G VHA IK G
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKML 404
+ ++ MY+K G + A + F + K D ++W +++ AYA HG EAV F +M
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL 464
R G+RPN ++F+ +L ACSHSGL+ EG + + M K G+ P HY ++ + RAG L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 465 QEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLH 524
AL I MP EP WK LL C H+N E + AA +F LDP D +V ++N++
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 525 ALAGNWDEAAQYRKMMAERNLRKE 548
A G W++AA+ RK M E ++KE
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKE 498
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 195/398 (48%), Gaps = 4/398 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKS 59
++ + I D R Y L K C + L G++ H LQ + + + N +L MY C S
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A +VF++M RD +W T+IS Y++ A+ F++ML G P+ +++ +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
A G QLH ++ GF ++V + + L ++Y + G +D A++ + + ++N V+
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
L+ G+ + AL LF M+++G + F ++ + AC++ + G+ +H+Y +K
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 240 LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET 299
G + G L+D Y+K G A + F+ + + + SW++++T Y Q G +A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 300 FKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSK 359
F+ +R G+ N + ++ ACS L G + K G+V ++ + +
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 360 CGKLDYAYQAF--LTIEKPDTIAWTAIICAYAYHGKSE 395
G L+ A + + IE P W A++ A H +E
Sbjct: 411 AGDLNRALRFIEEMPIE-PTAAIWKALLNACRMHKNTE 447
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 250/428 (58%), Gaps = 1/428 (0%)
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
A A+ K H ++IRI DV++ L N Y KCG+++ A + M ++ V+
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++ YT+ ++AL +F +M EG K EF S VL AC D +++H SVK
Sbjct: 132 TMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT 191
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
++ + VGT L+D Y+KCG + A Q FES+++ + +WS+++ GY Q+ +++AL +
Sbjct: 192 CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLY 251
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKC 360
+ + + N F +++ ACS ++ L+ G Q+HA K G + S+ + MY+KC
Sbjct: 252 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 311
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLL 419
G L +Y F +++ + W II +A H + E + LF KM + G+ PN VTF LL
Sbjct: 312 GSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 371
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
+ C H+GLV+EG++F M YG+ P + HY+CM+ + RAGLL EA E+I+S+PF+P
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPT 431
Query: 480 TLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
W +LL C ++NLE A +AA K+F L+P ++ +V + N++A W+E A+ RK+
Sbjct: 432 ASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKL 491
Query: 540 MAERNLRK 547
+ + +++K
Sbjct: 492 LRDCDVKK 499
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 181/375 (48%), Gaps = 7/375 (1%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRM-ANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
+ ++C GA+ + K H ++ R+ G+ + N ++ Y C A +VFD M++R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA-DPSALELGKQLH 133
L SW T+I Y A+ +F M + G K S ++L + + ALE K+LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLH 185
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
++ ++ + T L ++Y KCG + A M K++V + ++ GY Q +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+ALLL+ + + ++ ++F S V+ AC+ L + G+Q+H+ K G S V V + V
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
D Y+KCG + F ++E N W+ II+G+ + R + + F+ ++ G+ N
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQAFL 371
++++ C + LV + ++ GL + S M+ + + G L AY+
Sbjct: 366 TFSSLLSVCGH-TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 372 TIE-KPDTIAWTAII 385
+I P W +++
Sbjct: 425 SIPFDPTASIWGSLL 439
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 164/327 (50%), Gaps = 6/327 (1%)
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
+L+ CA + + H +++ LE +V++ L++ YSKCG E A Q F+ + E +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
SW+ +I Y ++ +AL+ F +R++G + F +++ AC D + ++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SE 395
++K + L +A++ +Y+KCG + A Q F +++ ++ W++++ Y + E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 396 AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMI 455
A+ L+ + R + N T ++ ACS+ + EGKQ + ++ K G + + +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAV 305
Query: 456 GVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH--LDPLD 513
+Y++ G L+E+ +I S E + W T++ G H + I K+ + P +
Sbjct: 306 DMYAKCGSLRESY-IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP-N 363
Query: 514 SATYVTMFNLHALAGNWDEAAQYRKMM 540
T+ ++ ++ G +E ++ K+M
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLM 390
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 284/543 (52%), Gaps = 3/543 (0%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERVF 67
D ++ ++ K G LG G++ H + + + + + ++ MY F + +VF
Sbjct: 106 DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVF 165
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
DEM +RD+ SW T+IS + + G A+ LF RM G +P+S + + + LE
Sbjct: 166 DEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE 225
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYT 187
GK++H + ++ GF D + + L +MY KC L+ A KM K+ VA ++ GY
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 188 QALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVS 247
+ + +MI EG + + + +L AC+ +++ G+ IH Y ++ + +++
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
V L+D Y KCG A F ++ SW+ +I+ Y G + KA+E + + S G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
V + +T++ ACS ++ L G Q+H + L SA++ MYSKCG A+
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
+ F +I K D ++WT +I AY HG+ EA+ F +M + G++P+ VT + +L+AC H+G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS-WKT 485
L+ EG +F M KYG++P I+HY+CMI + RAG L EA E+I+ P D T
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
L C H A + P D++TY+ +FNL+A +WD A + R M E L
Sbjct: 586 LFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGL 645
Query: 546 RKE 548
RK+
Sbjct: 646 RKK 648
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 251/521 (48%), Gaps = 11/521 (2%)
Query: 30 KLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEM-VDRDLFSWATIISAYAE 87
KL H R+ + + + ++ +Y CK +A VF+ + D++ W +++S Y++
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 88 EGHMIGAIRLFSRMLDLGI-KPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVS 146
+ +F R+L+ I P S F ++ ++ LG+ +H+ +++ G+ DV
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 147 IETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG 206
+ ++L MY K + + ++M ++ + ++ + Q+ AL LF +M G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 207 VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC 266
+ + ++ + AC+ L + G++IH VK G E + V + LVD Y KC E A
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS 326
+ F+ + + +W+++I GY G +E + +G + T+I ACS
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 327 DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIIC 386
+L++G +H I+ + + ++I +Y KCG+ + A F +K +W +I
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMIS 383
Query: 387 AYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMS-VKYGV 444
+Y G +AV+++ +M+ GV+P+ VTF +L ACS +++GKQ S+S +
Sbjct: 384 SYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLET 443
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
D + + ++ +YS+ G +EA + S+P + D +SW ++ SH A
Sbjct: 444 DELL--LSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 505 KI--FHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
++ F L P D T + + + AG DE ++ M +
Sbjct: 501 EMQKFGLKP-DGVTLLAVLSACGHAGLIDEGLKFFSQMRSK 540
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 144/279 (51%), Gaps = 10/279 (3%)
Query: 217 VLKACA-ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
+L+ C + K + + +H + LGL +V + L++ Y C +A FE+
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 276 ND-FSWSAIITGYCQSGRFDKALETFKNIRSKGV-ILNSFVYTNIFQACSAISDLVYGAQ 333
+D + W+++++GY ++ F LE FK + + + + +SF + N+ +A A+ G
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 334 VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK 393
+H +K G V + S+++ MY+K + + Q F + + D +W +I + G+
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 394 SE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY- 451
+E A++LF +M SG PN+V+ ++ACS ++ GK+ + VK G + +D Y
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKE-IHRKCVKKGFE--LDEYV 245
Query: 452 -NCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ ++ +Y + L+ A E+ + MP ++W +++ G
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKG 283
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/543 (28%), Positives = 284/543 (52%), Gaps = 2/543 (0%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERV 66
++P + K+ L H+ + ++ + N F+ ++ Y C S +A V
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
F+ ++ +D+ WA I+S Y E G+ +++L S M G P++ F T L + A
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
+ K +H Q+++ + D + L +Y + G + A N+M + V + ++ +
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
Q +A+ LF +M + V +EF S +L CA K G Q+H VK+G + ++
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
V L+D Y+KC + + A + F + N+ SW+ +I GY G KA F+
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
V + +++ AC++++ + G QVH AIK + ++ +++I MY+KCG + +A
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFA 503
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
F +E D +W A+I Y+ HG +A+++ M +PN +TF+G+L+ CS++
Sbjct: 504 QSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNA 563
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
GL+ +G++ +SM +G++P ++HY CM+ + R+G L +A+++I +P+EP + W+
Sbjct: 564 GLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRA 623
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
+L + N E A +A +I ++P D ATYV + N++A A W A RK M E +
Sbjct: 624 MLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGV 683
Query: 546 RKE 548
+KE
Sbjct: 684 KKE 686
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 222/494 (44%), Gaps = 8/494 (1%)
Query: 2 DEACISIDPRSYKHLFKMCGMLGALSDGKLFH-NRLQRMANGNKFIDNCILQMYCDCKSF 60
D +D +Y + + C K H + L++ + + F N +L Y
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 61 TAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSF 120
A +FDEM +R+ S+ T+ YA + I L+SR+ G + + +F + L F
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
E+ LHS ++++G+ ++ + L N Y CG +D A + K+ V
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
G++ Y + D+L L + M G + + F LKA L + + +H +K
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
+ VG L+ Y++ G A + F + + + WS +I +CQ+G ++A++ F
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKC 360
+R V+ N F ++I C+ G Q+H +K G + +A+I +Y+KC
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLL 419
K+D A + F + + ++W +I Y G+ +A +F + LR+ V VTF L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
AC+ + G Q + +++K + N +I +Y++ G ++ A + M D
Sbjct: 457 GACASLASMDLGVQ-VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TID 514
Query: 480 TLSWKTLLGGCWSH 493
SW L+ G +H
Sbjct: 515 VASWNALISGYSTH 528
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 293/558 (52%), Gaps = 18/558 (3%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRL-QRMANGNKFIDNCILQMYCDCKS 59
M + +ID ++ L C L G FH+ + ++ N F+ N ++ MY C +
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A ++F+ M DRD +W TII +Y ++ + A LF RM GI + + L +
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
L GKQ+H ++ G D+ ++L +MY KCG + A + + + V+
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
L+ GY+Q +A++LF +M+ GV E F+ +++AC + + G Q H K
Sbjct: 599 NALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Query: 240 LGLESEVS-VGTPLVDFYSKCGRFEAACQAFESIREPNDFS-WSAIITGYCQSGRFDKAL 297
G SE +G L+ Y AC F + P W+ +++G+ Q+G +++AL
Sbjct: 658 RGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL 717
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE------S 351
+ +K +R GV+ + + + + CS +S L G +H+ L+ +L+ + +
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS------LIFHLAHDLDELTSN 771
Query: 352 AMITMYSKCGKLDYAYQAFLTIEK-PDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVR 409
+I MY+KCG + + Q F + + + ++W ++I YA +G +E A+K+F M +S +
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
P+ +TF+G+L ACSH+G V +G++ + M +YG++ +DH CM+ + R G LQEA +
Sbjct: 832 PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD 891
Query: 470 MIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGN 529
I + +PD W +LLG C H + I+A K+ L+P +S+ YV + N++A G
Sbjct: 892 FIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGC 951
Query: 530 WDEAAQYRKMMAERNLRK 547
W++A RK+M +R ++K
Sbjct: 952 WEKANALRKVMRDRGVKK 969
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 236/475 (49%), Gaps = 40/475 (8%)
Query: 29 GKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE 87
G+ H + +M N + ++ MY C + A RVF+ +VD + W + S Y +
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238
Query: 88 EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSI 147
G A+ +F RM D G +P F T++
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDHLAFVTVI------------------------------ 268
Query: 148 ETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGV 207
N YI+ G L A + +M++ + VA ++ G+ + T A+ F M K V
Sbjct: 269 -----NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSV 323
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
K VL A + +++ G +H+ ++KLGL S + VG+ LV YSKC + EAA +
Sbjct: 324 KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAK 383
Query: 268 AFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD 327
FE++ E ND W+A+I GY +G K +E F +++S G ++ F +T++ C+A D
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHD 443
Query: 328 LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
L G+Q H+ IKK L + L +A++ MY+KCG L+ A Q F + D + W II +
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 388 YAY-HGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
Y +SEA LF +M G+ + L AC+H + +GKQ + +SVK G+D
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDR 562
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASI 501
+ + +I +YS+ G++++A ++ S+P E +S L+ G +S NLE A +
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG-YSQNNLEEAVV 615
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 144/531 (27%), Positives = 247/531 (46%), Gaps = 36/531 (6%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
++ Y A +F EM D+ +W +IS + + G AI F M +K +
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
S ++L + + L+LG +H++ I++G +++ + ++L +MY KC ++ A
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+ KN V ++ GY + LF M G +D+F F+ +L CAA D+
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
G Q HS +K L + VG LVD Y+KCG E A Q FE + + ++ +W+ II Y Q
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG 349
+A + FK + G++ + + +AC+ + L G QVH ++K GL + L
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 350 ESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVR 409
S++I MYSKCG + A + F ++ + ++ A+I Y+ + EAV LF +ML GV
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVN 626
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK--------YGVD---------------- 445
P+ +TF ++ AC + G QF ++ + G+
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 446 --------PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGGCWSHR 494
+I + M+ +S+ G +EAL+ + M + PD ++ T+L C
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 495 NLETASIAAGKIFHL-DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERN 544
+L IFHL LD T T+ +++A G+ ++Q M R+
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 253/532 (47%), Gaps = 21/532 (3%)
Query: 21 GMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWA 79
G++ L G + H ++ N ++ + ++ MY C+ AA +VF+ + +++ W
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 80 TIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRI 139
+I YA G + LF M G F +LL + A LE+G Q HS +I+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 140 GFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLF 199
++ + L +MY KCG L+ A +M ++ V ++ Y Q ++A LF
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 200 AKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKC 259
+M G+ D + LKAC + + G+Q+H SVK GL+ ++ G+ L+D YSKC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIF 319
G + A + F S+ E + S +A+I GY Q+ ++A+ F+ + ++GV + + I
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 320 QACSAISDLVYGAQVHADAIKKGLV---QYLSGESAMITMYSKCGKLDYAYQAFLTIEKP 376
+AC L G Q H K+G +YL +++ MY + A F + P
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSP 694
Query: 377 DTIA-WTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
+I WT ++ ++ +G EA+K + +M GV P+ TF+ +L CS ++EG+
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA- 753
Query: 435 LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR 494
+ S+ D N +I +Y++ G ++ + ++ M + +SW +L+ G +
Sbjct: 754 IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 495 NLETASIAAGKIF------HLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
E A KIF H+ P D T++ + + AG + + +MM
Sbjct: 814 YAEDAL----KIFDSMRQSHIMP-DEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 226/466 (48%), Gaps = 40/466 (8%)
Query: 25 ALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIIS 83
AL GK H++ L + + N I+ +Y C + AE+ FD +++D+ +W +++S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 84 AYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTA 143
Y+ G +R F + + I P+ F +L + A + +E G+Q+H +I++G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 144 DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI 203
+ L +MY KC + A + N V T L GY +A +A+L+F +M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 204 KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFE 263
EG + D F V INT Y + G+ +
Sbjct: 254 DEGHRPDHLAFVTV---------INT--------------------------YIRLGKLK 278
Query: 264 AACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS 323
A F + P+ +W+ +I+G+ + G A+E F N+R V ++ A
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 324 AISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
+++L G VHA+AIK GL + S++++MYSKC K++ A + F +E+ + + W A
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398
Query: 384 IICAYAYHGKSEAV-KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY 442
+I YA++G+S V +LF M SG + TF LL+ C+ S ++ G QF S+ +K
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF-HSIIIKK 457
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
+ + N ++ +Y++ G L++A ++ M + D ++W T++G
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMC-DRDNVTWNTIIG 502
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 193/430 (44%), Gaps = 46/430 (10%)
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
AL +GK +HS+ + +G ++ + + ++Y KC + AE + K+ A ++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
Y+ + L F + + + ++F FSIVL CA ++ GRQIH +K+GLE
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
G LVD Y+KC R A + FE I +PN W+ + +GY ++G ++A+ F+ +R
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+G + + + I Y + GKL
Sbjct: 254 DEGHRPDHLAFVTV-----------------------------------INTYIRLGKLK 278
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A F + PD +AW +I + G ++ A++ F M +S V+ T +L+A
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+ G + + ++K G+ I + ++ +YS+ ++ A ++ ++ E + + W
Sbjct: 339 IVANLDLG-LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDVFW 396
Query: 484 KTLLGG----CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
++ G SH+ +E +++D T+ ++ + A + + + +Q+ +
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF---TFTSLLSTCAASHDLEMGSQFHSI 453
Query: 540 MAERNLRKEV 549
+ ++ L K +
Sbjct: 454 IIKKKLAKNL 463
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 273/490 (55%), Gaps = 5/490 (1%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A +FDEM DRD+ +W +I+ YA + A F M+ G P+ ++L S +
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG-WLDGAEVATNKMTTKNAVACTG 181
L G +H ++++G + ++ + NMY C ++ A + + KN V T
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
L+ G+T L ++ +M+ E ++ + +I ++A A++ + TG+QIH+ +K G
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRG 243
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
+S + V ++D Y +CG A F + + + +W+ +I+ +S +AL F+
Sbjct: 244 FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQ 302
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
S+G + N + +T++ AC+ I+ L G Q+H ++G + + +A+I MY+KCG
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCG 362
Query: 362 KLDYAYQAFLTI-EKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLL 419
+ + + F I ++ + ++WT+++ Y HG +EAV+LF KM+ SG+RP+ + F+ +L
Sbjct: 363 NIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVL 422
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
+AC H+GLV++G ++ + M +YG++P D YNC++ + RAG + EA E++ MPF+PD
Sbjct: 423 SACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPD 482
Query: 480 TLSWKTLLGGCWSHR-NLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRK 538
+W +LG C +H+ N + +AA K+ L P TYV + ++A G W + A+ RK
Sbjct: 483 ESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRK 542
Query: 539 MMAERNLRKE 548
MM +KE
Sbjct: 543 MMRMMGNKKE 552
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 173/348 (49%), Gaps = 2/348 (0%)
Query: 147 IETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG 206
+ T L Y + G ++ A ++M ++ VA T ++ GY + + A F +M+K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 207 VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG-RFEAA 265
+EF S VLK+C +K + G +H VKLG+E + V +++ Y+ C EAA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 266 CQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI 325
C F I+ ND +W+ +ITG+ G L+ +K + + + + T +A ++I
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 326 SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
+ G Q+HA IK+G L ++++ +Y +CG L A F +E D I W +I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 386 CAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD 445
SEA+ +F + G PN TF L+ AC++ + G+Q L + G +
Sbjct: 287 SELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQ-LHGRIFRRGFN 345
Query: 446 PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
++ N +I +Y++ G + ++ + + + +SW +++ G SH
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 192/392 (48%), Gaps = 28/392 (7%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCK-SFTAAERVFDEMVDR 73
+ K C + L+ G L H + ++ G+ ++DN ++ MY C + AA +F ++ +
Sbjct: 117 VLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVK 176
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
+ +W T+I+ + G IG ++++ +ML + + + + A ++ GKQ+H
Sbjct: 177 NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
+ +I+ GF +++ + ++ ++Y +CG+L A+ ++M K+ + L+ ++ +
Sbjct: 237 ASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS-DSS 295
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+ALL+F + +G + + F+ ++ ACA + +N G+Q+H + G V + L+
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 254 DFYSKCGRFEAACQAF-ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
D Y+KCG + + F E + N SW++++ GY G +A+E F + S G+ +
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR 415
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA------------MITMYSKC 360
V+ + AC HA ++KGL + ES ++ + +
Sbjct: 416 IVFMAVLSACR-----------HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 361 GKLDYAYQAFLTIE-KPDTIAWTAIICAYAYH 391
GK+ AY+ + KPD W AI+ A H
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAH 496
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 294/553 (53%), Gaps = 12/553 (2%)
Query: 4 ACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTA 62
A + D +Y + K + +L +GK H + ++ + ++ N ++ +Y
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
AE+VF+EM +RD+ SW ++IS Y G ++ LF ML G KP + LG+ +
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 123 PSALELGKQLHSQLIRIGF-TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+ ++GK++H +R T DV + T++ +MY K G + AE N M +N VA
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ Y + R TDA L F KM ++ + + SI L +A+ + GR IH Y+++ G
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE---GRTIHGYAMRRG 360
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
+ + T L+D Y +CG+ ++A F+ + E N SW++II Y Q+G+ ALE F+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE---SAMITMYS 358
+ ++ +S +I A + L G ++HA +K +Y S ++++ MY+
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS---RYWSNTIILNSLVHMYA 477
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIG 417
CG L+ A + F I D ++W +II AYA HG +V LF +M+ S V PN TF
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
LL ACS SG+V EG ++ +SM +YG+DP I+HY CM+ + R G A + MPF
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 478 PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYR 537
P W +LL +H+++ A AA +IF ++ ++ YV + N++A AG W++ + +
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 538 KMMAERNLRKEVS 550
+M + + + S
Sbjct: 658 LLMESKGISRTSS 670
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 236/440 (53%), Gaps = 9/440 (2%)
Query: 51 LQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSS 110
L+ + D + A ++FDEM D F W +I + G I A++ +SRM+ G+K +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 111 SIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK 170
+ ++ S A S+LE GK++H+ +I++GF +DV + +L ++Y+K G AE +
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 171 MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG 230
M ++ V+ ++ GY +L+LF +M+K G K D F L AC+ + G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 231 RQIHSYSVKLGLES-EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
++IH ++V+ +E+ +V V T ++D YSK G A + F + + N +W+ +I Y +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 290 SGRFDKALETFKNIRSK-GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLS 348
+GR A F+ + + G+ + N+ A S ++ G +H A+++G + ++
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMV 366
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSG 407
E+A+I MY +CG+L A F + + + I+W +II AY +GK+ A++LF ++ S
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 408 VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
+ P++ T +L A + S + EG++ + + VK N ++ +Y+ G L++A
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGRE-IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 468 LEMIRSMPFEPDTLSWKTLL 487
+ + + D +SW +++
Sbjct: 486 RKCFNHILLK-DVVSWNSII 504
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 275/545 (50%), Gaps = 2/545 (0%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAE 64
+S D + K CG ++ G+ H + + + ++ + +L MY +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
RVF EM R+ +W II+ G + FS M + F L + A
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
++ GK +H+ +I GF + + +L+ MY +CG + M+ ++ V+ T L+V
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
Y + + A+ F KM V +E F+ + ACA+L + G Q+H + LGL
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+SV ++ YS CG +A F+ +R + SWS II GYCQ+G ++ + F +R
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
G F ++ ++ + G QVHA A+ GL Q + S++I MYSKCG +
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A F ++ D ++ TA+I YA HGKS EA+ LF K L+ G RP++VTFI +L AC+
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACT 523
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
HSG + G + + M Y + P +HY CM+ + RAG L +A +MI M ++ D + W
Sbjct: 524 HSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVW 583
Query: 484 KTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
TLL C + ++E AA +I LDP + VT+ N+++ GN +EAA RK M +
Sbjct: 584 TTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK 643
Query: 544 NLRKE 548
+ KE
Sbjct: 644 GVIKE 648
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 260/513 (50%), Gaps = 17/513 (3%)
Query: 44 KFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFS--RM 101
KF N L+ + + AA +VFD+M D+ SW +II Y + A+ LFS R+
Sbjct: 40 KFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRV 99
Query: 102 LDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL 161
+D + P +S+ +L + S + G+ LH+ ++ + V + ++L +MY + G +
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 162 DGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
D + ++M +NAV T ++ G A R+ + L F++M + D + F+I LKAC
Sbjct: 160 DKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Query: 222 AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWS 281
A L+ + G+ IH++ + G + + V L Y++CG + FE++ E + SW+
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 282 AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK 341
++I Y + G+ KA+ETF +R+ V N + ++F AC+++S LV+G Q+H + +
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL 339
Query: 342 GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLF 400
GL LS ++M+ MYS CG L A F + D I+W+ II Y G E K F
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF 399
Query: 401 HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSR 460
M +SG +P LL+ + +++ G+Q + ++++ +G++ + +I +YS+
Sbjct: 400 SWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSK 458
Query: 461 AGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA------SIAAGKIFHLDPLDS 514
G ++EA MI D +S ++ G H + A S+ G P DS
Sbjct: 459 CGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG----FRP-DS 512
Query: 515 ATYVTMFNLHALAGNWDEAAQYRKMMAER-NLR 546
T++++ +G D Y MM E N+R
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMR 545
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 254/486 (52%), Gaps = 2/486 (0%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A +VFDE+ R + + ++I Y+ + +RL+ +M+ I+P SS F + +
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS 128
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
LE G+ + + + G+ DV + +++ N+Y+KCG +D AEV KM ++ + T +
Sbjct: 129 GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTM 188
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ G+ QA + A+ + +M EG D V +L+A L D GR +H Y + GL
Sbjct: 189 VTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGL 248
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
V V T LVD Y+K G E A + F + SW ++I+G+ Q+G +KA E
Sbjct: 249 PMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVE 308
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
++S G + + ACS + L G VH +K+ ++ ++ +A++ MYSKCG
Sbjct: 309 MQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSKCGA 367
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
L + + F + + D + W +I Y HG E V LF KM S + P+ TF LL+A
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSA 427
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL 481
SHSGLV++G+ + M KY + P+ HY C+I + +RAG ++EAL+MI S +
Sbjct: 428 LSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALP 487
Query: 482 SWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
W LL GC +HRNL IAA KI L+P + N A A W E A+ RK+M
Sbjct: 488 IWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMR 547
Query: 542 ERNLRK 547
+ K
Sbjct: 548 NGAMEK 553
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 202/442 (45%), Gaps = 42/442 (9%)
Query: 131 QLHSQLIRIG-FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
Q+H+ +I G SI L + G + A +++ + ++V Y++
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
+ L L+ +MI E ++ D F++ +KAC + + G + +V G +++V V
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
+ +++ Y KCG+ + A F + + + W+ ++TG+ Q+G+ KA+E ++ ++++G
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
+ V + QA + D G VH + GL + E++++ MY+K G ++ A +
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 370 FLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F + ++W ++I +A +G ++A + +M G +P+ VT +G+L ACS G +
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 429 KEG---------KQFLDSMSVKYGVD------------PTIDH--------YNCMIGVYS 459
K G + LD ++ +D +H +N MI Y
Sbjct: 335 KTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYG 394
Query: 460 RAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETA-----SIAAGKIFHLDP 511
G QE + + M EPD ++ +LL SH L S+ K + + P
Sbjct: 395 IHGNGQEVVSLFLKMTESNIEPDHATFASLLSAL-SHSGLVEQGQHWFSVMINK-YKIQP 452
Query: 512 LDSATYVTMFNLHALAGNWDEA 533
YV + +L A AG +EA
Sbjct: 453 -SEKHYVCLIDLLARAGRVEEA 473
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 5/350 (1%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
F+ + +L +Y C AE +F +M RD+ W T+++ +A+ G + A+ + M +
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G + LL + D ++G+ +H L R G +V +ET+L +MY K G+++ A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
++M K AV+ L+ G+ Q A +M G + D VL AC+ +
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
+ TGR +H Y +K + V+ T L+D YSKCG ++ + FE + + W+ +I
Sbjct: 332 GSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMI 390
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+ Y G + + F + + + + ++ A S + G + I K +
Sbjct: 391 SCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKI 450
Query: 345 QYLSGESA-MITMYSKCGKLDYAYQAFLTIEKPDTI--AWTAIICAYAYH 391
Q +I + ++ G+++ A + EK D W A++ H
Sbjct: 451 QPSEKHYVCLIDLLARAGRVEEALD-MINSEKLDNALPIWVALLSGCINH 499
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 8/276 (2%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
L + G LG G+ H L R N ++ ++ MY A RVF M+ +
Sbjct: 223 LLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT 282
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
SW ++IS +A+ G A M LG +P +L + + +L+ G+ +H
Sbjct: 283 AVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC 342
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
+++ D T L +MY KCG L + + K+ V ++ Y +
Sbjct: 343 YILK-RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQE 401
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV---KLGLESEVSVGTP 251
+ LF KM + ++ D F+ +L A + + G+ H +SV K ++
Sbjct: 402 VVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQ--HWFSVMINKYKIQPSEKHYVC 459
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFS-WSAIITG 286
L+D ++ GR E A S + N W A+++G
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 283/538 (52%), Gaps = 10/538 (1%)
Query: 21 GMLGALSD------GKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR 73
G LGA S G+ H + +M + + ++ +L MY C AE VF +VD+
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK 336
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
L W +++AYAE + A+ LF M + P S ++ + GK +H
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
++L + + +IE+ L +Y KCG A + M K+ VA L+ G + +
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 194 DALLLFAKMIKE--GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
+AL +F M + +K D + + V ACA L+ + G Q+H +K GL V VG+
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILN 311
L+D YSKCG E A + F S+ N +W+++I+ Y ++ + +++ F + S+G+ +
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 312 SFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFL 371
S T++ A S+ + L+ G +H ++ G+ ++A+I MY KCG YA F
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 372 TIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKE 430
++ I W +I Y HG A+ LF +M ++G P+ VTF+ L++AC+HSG V+E
Sbjct: 637 KMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEE 696
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
GK + M YG++P ++HY M+ + RAGLL+EA I++MP E D+ W LL
Sbjct: 697 GKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSAS 756
Query: 491 WSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
+H N+E ++A K+ ++P +TYV + NL+ AG +EAA+ +M E+ L K+
Sbjct: 757 RTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ 814
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 248/508 (48%), Gaps = 25/508 (4%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDE- 69
++ L K C L LS GK H + + + FI ++ MY C A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 70 ------MVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKP---SSSIFCTLL--- 117
+ RD+ W ++I Y + + F RML G++P S SI +++
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW-LDGAEVATNKMTTKNA 176
G+F E GKQ+H ++R D ++T L +MY K G +D V N
Sbjct: 182 GNFRR----EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
V ++VG+ + +L L+ VKL F+ L AC+ ++ GRQIH
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD 297
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKA 296
VK+GL ++ V T L+ YSKCG A F + + W+A++ Y ++ A
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSA 357
Query: 297 LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITM 356
L+ F +R K V+ +SF +N+ CS + YG VHA+ K+ + + ESA++T+
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKML--RSGVRPNAV 413
YSKCG AY F ++E+ D +AW ++I +GK EA+K+F M ++P++
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 414 TFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRS 473
+ NAC+ ++ G Q SM +K G+ + + +I +YS+ GL + AL++ S
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 474 MPFEPDTLSWKTLLGGCWSHRNLETASI 501
M E + ++W +++ C+S NL SI
Sbjct: 537 MSTE-NMVAWNSMI-SCYSRNNLPELSI 562
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFES 271
F F +LKAC+AL +++ G+ IH V LG + + T LV+ Y KCG + A Q F+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 272 IREPN------DFS-WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSA 324
+ D + W+++I GY + RF + + F+ + GV ++F + +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 325 ISDLVY--GAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAW 381
+ G Q+H ++ L ++A+I MY K G A++ F+ IE K + + W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 382 TAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
+I + G E ++ L+ + V+ + +F G L ACS S G+Q + V
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQ-IHCDVV 299
Query: 441 KYGVDPTIDHYNC--MIGVYSRAGLLQEA 467
K G+ D Y C ++ +YS+ G++ EA
Sbjct: 300 KMGLHN--DPYVCTSLLSMYSKCGMVGEA 326
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 267/524 (50%), Gaps = 34/524 (6%)
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTLL 117
S A +VFDE+ + F+W T+I AYA + +I F M+ + P+ F L+
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV 177
+ A+ S+L LG+ LH ++ +DV + +L + Y CG LD A + K+ V
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
+ ++ G+ Q AL LF KM E VK VL ACA ++++ GRQ+ SY
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWS---------------- 281
+ + +++ ++D Y+KCG E A + F+++ E ++ +W+
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 282 ---------------AIITGYCQSGRFDKALETFKNIR-SKGVILNSFVYTNIFQACSAI 325
A+I+ Y Q+G+ ++AL F ++ K + LN + AC+ +
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 326 SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
L G +H+ K G+ SA+I MYSKCG L+ + + F ++EK D W+A+I
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 386 CAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
A HG +EAV +F+KM + V+PN VTF + ACSH+GLV E + M YG+
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 498
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
P HY C++ V R+G L++A++ I +MP P T W LLG C H NL A +A
Sbjct: 499 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 558
Query: 505 KIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
++ L+P + +V + N++A G W+ ++ RK M L+KE
Sbjct: 559 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 280/509 (55%), Gaps = 6/509 (1%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
I N ++ MY C S A RVF M D+D SW ++I+ + G I A+ + M
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
I P S + L S A +LG+Q+H + +++G +VS+ L +Y + G+L+
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRH-TDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
+ M + V+ ++ ++ R +A++ F + G KL+ FS VL A ++L
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND-FSWSAI 283
G+QIH ++K + E + L+ Y KCG + + F + E D +W+++
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 284 ITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL 343
I+GY + KAL+ + G L+SF+Y + A ++++ L G +VHA +++ L
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHK 402
+ SA++ MYSKCG+LDYA + F T+ ++ +W ++I YA HG+ EA+KLF
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 403 MLRSG-VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
M G P+ VTF+G+L+ACSH+GL++EG + +SMS YG+ P I+H++CM V RA
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 462 GLLQEALEMIRSMPFEPDTLSWKTLLGGCW--SHRNLETASIAAGKIFHLDPLDSATYVT 519
G L + + I MP +P+ L W+T+LG C + R E AA +F L+P ++ YV
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 830
Query: 520 MFNLHALAGNWDEAAQYRKMMAERNLRKE 548
+ N++A G W++ + RK M + +++KE
Sbjct: 831 LGNMYAAGGRWEDLVKARKKMKDADVKKE 859
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 245/496 (49%), Gaps = 23/496 (4%)
Query: 23 LGALSDGKLFHNRL-QRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATI 81
+G + FH+RL + + + ++ N ++ Y + +A +VFDEM R+ SWA I
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL--GKQLHSQLIRI 139
+S Y+ G A+ M+ GI + F ++L + + ++ + G+Q+H + ++
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 140 GFTADVSIETTLSNMYIKC-GWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLL 198
+ D + L +MY KC G + A A + KN+V+ ++ Y+QA A +
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 199 FAKMIKEGVKLDEFVF-SIVLKACAALK-DINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
F+ M +G + E+ F S+V AC+ + D+ QI K GL +++ VG+ LV +
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK--------GV 308
+K G A + F + N + + ++ G + ++A + F ++ S +
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI 313
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG-ESAMITMYSKCGKLDYAY 367
+L+SF ++ + L G +VH I GLV ++ G + ++ MY+KCG + A
Sbjct: 314 LLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
+ F + D+++W ++I +G EAV+ + M R + P + T I L++C+
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
K G+Q + S+K G+D + N ++ +Y+ G L E ++ SMP E D +SW ++
Sbjct: 430 WAKLGQQ-IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSI 487
Query: 487 LGG-CWSHRNLETASI 501
+G S R+L A +
Sbjct: 488 IGALARSERSLPEAVV 503
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 248/493 (50%), Gaps = 18/493 (3%)
Query: 12 SYKHLFKMCGMLGALSD--GKLFHNRLQRMANG-NKFIDNCILQMYCDC-KSFTAAERVF 67
++ + + C +G++ G+ H + +++ + + N ++ MY C S A F
Sbjct: 104 AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF 163
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG---SFADPS 124
++ ++ SW +IIS Y++ G A R+FS M G +P+ F +L+ S +P
Sbjct: 164 GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD 223
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+ L +Q+ + + G D+ + + L + + K G L A N+M T+NAV GLMV
Sbjct: 224 -VRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA-----CAALKDINTGRQIHSYSVK 239
G + +A LF M + + + I+L + A + GR++H + +
Sbjct: 283 GLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 240 LGL-ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
GL + V +G LV+ Y+KCG A + F + + + SW+++ITG Q+G F +A+E
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVE 401
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
+K++R ++ SF + +C+++ G Q+H +++K G+ +S +A++T+Y+
Sbjct: 402 RYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA 461
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS--EAVKLFHKMLRSGVRPNAVTFI 416
+ G L+ + F ++ + D ++W +II A A +S EAV F R+G + N +TF
Sbjct: 462 ETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFS 521
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF 476
+L+A S + GKQ + +++K + N +I Y + G + ++ M
Sbjct: 522 SVLSAVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE 580
Query: 477 EPDTLSWKTLLGG 489
D ++W +++ G
Sbjct: 581 RRDNVTWNSMISG 593
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 200/407 (49%), Gaps = 13/407 (3%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE-EGHMIGAIRLFSRM 101
N + N ++ +Y + ++F M + D SW +II A A E + A+ F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 102 LDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL 161
G K + F ++L + + S ELGKQ+H ++ + + E L Y KCG +
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 162 DGAEVATNKMTTK-NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA 220
DG E ++M + + V ++ GY AL L M++ G +LD F+++ VL A
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
Query: 221 CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSW 280
A++ + G ++H+ SV+ LES+V VG+ LVD YSKCGR + A + F ++ N +SW
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 281 SAIITGYCQSGRFDKALETFKNIRSKGVILNSFV-YTNIFQACSAISDLVYGAQVHADAI 339
+++I+GY + G+ ++AL+ F+ ++ G V + + ACS L G + H +++
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESM 747
Query: 340 KK--GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAII--CAYAYHGKS 394
GL + S M + + G+LD + KP+ + W ++ C A K+
Sbjct: 748 SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKA 807
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG----LVKEGKQFLDS 437
E K +ML NAV ++ L N + G LVK K+ D+
Sbjct: 808 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 280/515 (54%), Gaps = 20/515 (3%)
Query: 53 MYCDCKSFTAAER---------VFDEMVDR-DLFSWATIISAYAEEGHMIGAIRLFSRML 102
++C ER +F+ VD+ D+FSW ++I+ A G A+ FS M
Sbjct: 9 LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR 68
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
L + P+ S F + + + + GKQ H Q G+ +D+ + + L MY CG L+
Sbjct: 69 KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI------KEGVKLDEFVFSI 216
A +++ +N V+ T ++ GY DA+ LF ++ + + LD
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS 188
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR--FEAACQAFESIRE 274
V+ AC+ + IHS+ +K G + VSVG L+D Y+K G A + F+ I +
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKN-IRSKGVILNSFVYTNIFQACSAISDLVYGAQ 333
+ S+++I++ Y QSG ++A E F+ +++K V N+ + + A S L G
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 334 VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK 393
+H I+ GL + +++I MY KCG+++ A +AF ++ + +WTA+I Y HG
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 394 S-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYN 452
+ +A++LF M+ SGVRPN +TF+ +L ACSH+GL EG ++ ++M ++GV+P ++HY
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 453 CMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPL 512
CM+ + RAG LQ+A ++I+ M +PD++ W +LL C H+N+E A I+ ++F LD
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488
Query: 513 DSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+ Y+ + +++A AG W + + R +M R L K
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 523
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 192/401 (47%), Gaps = 14/401 (3%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
S+ K C L + GK H + + F+ + ++ MY C A +VFDE+
Sbjct: 78 SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE--- 127
R++ SW ++I Y G+ + A+ LF +L ++F +G + SA
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197
Query: 128 ---LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT---NKMTTKNAVACTG 181
L + +HS +I+ GF VS+ TL + Y K G G VA +++ K+ V+
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE-GGVAVARKIFDQIVDKDRVSYNS 256
Query: 182 LMVGYTQALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
+M Y Q+ +A +F +++K V + S VL A + + G+ IH +++
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
GLE +V VGT ++D Y KCGR E A +AF+ ++ N SW+A+I GY G KALE F
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQ-VHADAIKKGLVQYLSGESAMITMYSK 359
+ GV N + ++ ACS V G + +A + G+ L M+ + +
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 360 CGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKL 399
G L AY ++ KPD+I W++++ A H E ++
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 279/542 (51%), Gaps = 5/542 (0%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKSFTAAE 64
+ D ++ + + CG + L+ GK H + R + N ++ MY C +A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
+FD M RD+ SW +IS Y E G + LF M L + P +++ +
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
LG+ +H+ +I GF D+S+ +L+ MY+ G AE ++M K+ V+ T ++
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
GY A+ + M ++ VK DE + VL ACA L D++TG ++H ++K L S
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
V V L++ YSKC + A F +I N SW++II G + R +AL + ++
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+ N+ T AC+ I L+ G ++HA ++ G+ +A++ MY +CG+++
Sbjct: 492 MT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A+ F + +K D +W ++ Y+ G+ S V+LF +M++S VRP+ +TFI LL CS
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
S +V++G + M YGV P + HY C++ + RAG LQEA + I+ MP PD W
Sbjct: 610 KSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 484 KTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
LL C H ++ ++A IF LD Y+ + NL+A G W E A+ R+MM E
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728
Query: 544 NL 545
L
Sbjct: 729 GL 730
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 240/491 (48%), Gaps = 5/491 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M E +++D + L ++C A +G K++ L M++ + N L M+ +
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGN 144
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG-IKPSSSIFCTLLG 118
A VF +M +R+LFSW ++ YA++G+ A+ L+ RML +G +KP F +L
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+ L GK++H ++R G+ D+ + L MY+KCG + A + ++M ++ ++
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
++ GY + + L LF M V D + V+ AC L D GR IH+Y +
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
G ++SV L Y G + A + F + + SW+ +I+GY + DKA++
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
T++ + V + + AC+ + DL G ++H AIK L+ Y+ + +I MYS
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGL 418
KC +D A F I + + I+WT+II + + +F + ++ ++PNA+T
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAA 504
Query: 419 LNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEP 478
L AC+ G + GK+ + + ++ GV N ++ +Y R G + A S +
Sbjct: 505 LAACARIGALMCGKE-IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--KK 561
Query: 479 DTLSWKTLLGG 489
D SW LL G
Sbjct: 562 DVTSWNILLTG 572
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 201/403 (49%), Gaps = 4/403 (0%)
Query: 89 GHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIE 148
G + A++L + M +L + +F L+ A E G +++S + + V +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 149 TTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI-KEGV 207
M+++ G L A KM+ +N + L+ GY + +A+ L+ +M+ GV
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
K D + F VL+ C + D+ G+++H + V+ G E ++ V L+ Y KCG ++A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 268 AFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD 327
F+ + + SW+A+I+GY ++G + LE F +R V + T++ AC + D
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 328 LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
G +HA I G +S +++ MY G A + F +E+ D ++WT +I
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 388 YAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
Y Y+ +A+ + M + V+P+ +T +L+AC+ G + G + L +++K +
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKLAIKARLIS 431
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ N +I +YS+ + +AL++ ++P + +SW +++ G
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAG 473
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 165/356 (46%), Gaps = 7/356 (1%)
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+A+ L M + V +DE VF +++ C + G +++S ++ V +G +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF-KNIRSKGVILNS 312
+ + G A F + E N FSW+ ++ GY + G FD+A+ + + + GV +
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
+ + + + C I DL G +VH ++ G + +A+ITMY KCG + A F
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 373 IEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEG 431
+ + D I+W A+I Y +G E ++LF M V P+ +T +++AC G + G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 432 KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCW 491
+ + + + G I N + +Y AG +EA ++ M D +SW T++ G +
Sbjct: 317 RD-IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISG-Y 373
Query: 492 SHRNLETASIAAGKIFHLDPL--DSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
+ L +I ++ D + D T + + A G+ D + K+ + L
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 291 bits (744), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 285/542 (52%), Gaps = 7/542 (1%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQ-RMANGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
+Y + K C L A+ DGKL H+ + + ++ ++ Y C A +VFDEM
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL-GIKPSSSIFCTLLGSFADPSALELG 129
RD+ +W +IS ++ + I LF M + G+ P+ S + + AL G
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
K +H R+GF+ D+ ++T + ++Y K + A + KN V + ++ GY +
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 190 LRHTDALLLFAKM-IKEGVKL-DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVS 247
+A +F +M + + V + ++L CA D++ GR +H Y+VK G +++
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT 344
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
V ++ FY+K G A + F I + S++++ITG + R +++ F +R+ G
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+ + + ACS ++ L +G+ H + G S +A++ MY+KCGKLD A
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAK 464
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
+ F T+ K D ++W ++ + HG EA+ LF+ M +GV P+ VT + +L+ACSHSG
Sbjct: 465 RVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSG 524
Query: 427 LVKEGKQFLDSMSV-KYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
LV EGKQ +SMS + V P IDHYNCM + +RAG L EA + + MPFEPD T
Sbjct: 525 LVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGT 584
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
LL CW+++N E + + K+ L + + V + N ++ A W++AA+ R + +R L
Sbjct: 585 LLSACWTYKNAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGL 643
Query: 546 RK 547
K
Sbjct: 644 LK 645
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 222/451 (49%), Gaps = 10/451 (2%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDL--FSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
+ ++Y C A VFDE+ + +W +I AYA A+ L+ +ML+ G++
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P+ + +L + A A++ GK +HS + F D+ + T L + Y KCG L+ A
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKV 160
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKD 226
++M ++ VA ++ G++ TD + LF M + +G+ + + A
Sbjct: 161 FDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA 220
Query: 227 INTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITG 286
+ G+ +H Y ++G +++ V T ++D Y+K A + F+ + N+ +WSA+I G
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
Query: 287 YCQSGRFDKALETFKN--IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
Y ++ +A E F + ++ I C+ DL G VH A+K G +
Sbjct: 281 YVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKM 403
L+ ++ +I+ Y+K G L A++ F I D I++ ++I + + E+ +LFH+M
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM 400
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK-YGVDPTIDHYNCMIGVYSRAG 462
SG+RP+ T +G+L ACSH + G V Y V+ +I N ++ +Y++ G
Sbjct: 401 RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI--CNALMDMYTKCG 458
Query: 463 LLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
L A + +M + D +SW T+L G H
Sbjct: 459 KLDVAKRVFDTM-HKRDIVSWNTMLFGFGIH 488
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 184/388 (47%), Gaps = 13/388 (3%)
Query: 112 IFCTLLGSFADPSALELGKQLHSQLIRIGFTADVS-IETTLSNMYIKCGWLDGAEVATNK 170
+F +LL + L LG+ +H L++ T S + L+ +Y C ++ A ++
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 171 MTTK--NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
+ N +A ++ Y AL L+ KM+ GV+ ++ + VLKACA L+ I+
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC 288
G+ IHS+ +++ V T LVDFY+KCG E A + F+ + + + +W+A+I+G+
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 289 QSGRFDKALETFKNIRS-KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
+ F ++R G+ N +F A L G VH + G L
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRS 406
++ ++ +Y+K + YA + F K + + W+A+I Y + EA ++F +ML +
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 407 G----VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
V P A+ I L C+ G + G+ + +VK G + N +I Y++ G
Sbjct: 301 DNVAMVTPVAIGLI--LMGCARFGDLSGGR-CVHCYAVKAGFILDLTVQNTIISFYAKYG 357
Query: 463 LLQEALEMIRSMPFEPDTLSWKTLLGGC 490
L +A + + D +S+ +L+ GC
Sbjct: 358 SLCDAFRQFSEIGLK-DVISYNSLITGC 384
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/577 (30%), Positives = 292/577 (50%), Gaps = 37/577 (6%)
Query: 8 IDPRSYKHLFKM--CGMLGALSDGKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAE 64
I P Y F + C A +G H + +M F+ N ++ Y +C +A
Sbjct: 130 ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR 189
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSFADP 123
+VFDEM +R++ SW ++I YA A+ LF RM+ D + P+S ++ + A
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
LE G+++++ + G + + + L +MY+KC +D A+ ++ N C +
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
Y + +AL +F M+ GV+ D + +C+ L++I G+ H Y ++ G E
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF--- 300
S ++ L+D Y KC R + A + F+ + +W++I+ GY ++G D A ETF
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 301 --KNIRSKGVILNSFVYTNIF-QACSAISDLVYGAQVHADAI------------------ 339
KNI S I++ V ++F +A + V+AD +
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 340 --------KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
K G+ + + ++ M+S+CG + A F ++ D AWTA I A A
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 392 GKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G +E A++LF M+ G++P+ V F+G L ACSH GLV++GK+ SM +GV P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD 510
Y CM+ + RAGLL+EA+++I MP EP+ + W +LL C N+E A+ AA KI L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
P + +YV + N++A AG W++ A+ R M E+ LRK
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRK 706
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 232/518 (44%), Gaps = 48/518 (9%)
Query: 5 CISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFID-NCILQMYCDC---KSF 60
C P S K+ C + L K+FH L + N ++ C+ +S
Sbjct: 31 CTKATPSSLKN----CKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESL 83
Query: 61 TAAERVFDEMVDRDL-FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
+ A+ VF+ F + ++I YA G AI LF RM++ GI P F L +
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
A A G Q+H ++++G+ D+ ++ +L + Y +CG LD A ++M+ +N V+
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 180 TGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
T ++ GY + DA+ LF +M++ E V + V+ ACA L+D+ TG +++++
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
G+E + + LVD Y KC + A + F+ N +A+ + Y + G +AL
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
F + GV + + +CS + ++++G H ++ G + + +A+I MY
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK------------------------- 393
KC + D A++ F + + W +I+ Y +G+
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 394 -------SEAVKLFHKML-RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD 445
EA+++F M + GV + VT + + +AC H G + K + K G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQ 502
Query: 446 PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+ ++ ++SR G + A+ + S+ D +W
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAW 539
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 180/396 (45%), Gaps = 37/396 (9%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD----GAEVATNKMTTKNAVACTGLMVG 185
K H L + G DVS T L + G + EV N + L+ G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
Y + +A+LLF +M+ G+ D++ F L ACA + G QIH VK+G +
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET-FKNIR 304
+ V LV FY++CG ++A + F+ + E N SW+++I GY + A++ F+ +R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+ V NS + AC+ + DL G +V+A G+ SA++ MY KC +D
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A + F + A+ Y G + EA+ +F+ M+ SGVRP+ ++ + +++CS
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 424 -----------HSGLVKEGKQFLDSM--------------SVKYGV-----DPTIDHYNC 453
H +++ G + D++ + + + T+ +N
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 454 MIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
++ Y G + A E +MP E + +SW T++ G
Sbjct: 409 IVAGYVENGEVDAAWETFETMP-EKNIVSWNTIISG 443
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 290/587 (49%), Gaps = 72/587 (12%)
Query: 33 HNR-LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHM 91
H R L+ A + +I ++ Y + F A+ V + D ++S++++I A +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 92 IGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTL 151
+I +FSRM G+ P S + L A+ SA ++GKQ+H G D ++ ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 152 SNMYIKCGWLDGAEVATNKMTTKNAVACT------------------------------- 180
+MY++CG + A ++M+ K+ V C+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 181 ----GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
G++ G+ ++ H +A+++F K+ G D+ S VL + + +N GR IH Y
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 237 SVKLGLESEVSVGTPLVDFYSKCG----------RFE----AACQAF------------- 269
+K GL + V + ++D Y K G +FE C A+
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 270 --------ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA 321
E E N SW++II G Q+G+ +ALE F+ ++ GV N ++ A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAW 381
C I+ L +G H A++ L+ + SA+I MY+KCG+++ + F + + + W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 382 TAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
+++ ++ HGK+ E + +F ++R+ ++P+ ++F LL+AC GL EG ++ MS
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 441 KYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETAS 500
+YG+ P ++HY+CM+ + RAG LQEA ++I+ MPFEPD+ W LL C N++ A
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 501 IAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
IAA K+FHL+P + TYV + N++A G W E R M L+K
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 201/509 (39%), Gaps = 85/509 (16%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFH-NRLQRMANGNKFIDNCILQMYCDCKSFTAAERVF 67
D +LFK+C L A GK H + + F+ + MY C A +VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 68 DEMVDRD-----------------------------------LFSWATIISAYAEEGHMI 92
D M D+D + SW I+S + G+
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 93 GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
A+ +F ++ LG P ++L S D L +G+ +H +I+ G D + + +
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 153 NMYIKCGWLDG--------------------AEVATNKMTTK---------------NAV 177
+MY K G + G ++ N + K N V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
+ T ++ G Q + +AL LF +M GVK + +L AC + + GR H ++
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL 297
V++ L V VG+ L+D Y+KCGR + F + N W++++ G+ G+ + +
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYLSGESAMITM 356
F+++ + + +T++ AC + G + ++ G+ L S M+ +
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 357 YSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE-----AVKLFHKMLRSGVRP 410
+ GKL AY + +PD+ W A++ + + A KLFH + P
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFH------LEP 588
Query: 411 -NAVTFIGLLNACSHSGLVKEGKQFLDSM 438
N T++ L N + G+ E + M
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 199/485 (41%), Gaps = 74/485 (15%)
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
Q H+++++ G D I L Y + A++ + + + L+ T+A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
T ++ +F++M G+ D V + K CA L G+QIH S GL+ + V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 251 PLVDFYSKCGRFEAACQAF-------------------------ESIR----------EP 275
+ Y +CGR A + F E +R E
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N SW+ I++G+ +SG +A+ F+ I G + +++ + L G +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGK-------------------------------LD 364
IK+GL++ SAMI MY K G +D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 365 YAYQAFLTIEKP----DTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLL 419
A + F ++ + ++WT+II A +GK EA++LF +M +GV+PN VT +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
AC + + G+ +V+ + + + +I +Y++ G + + + MP + +
Sbjct: 396 PACGNIAALGHGRS-THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-N 453
Query: 480 TLSWKTLLGGCWSH-RNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRK 538
+ W +L+ G H + E SI + D ++ ++ + G DE +Y K
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 539 MMAER 543
MM+E
Sbjct: 514 MMSEE 518
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 292/577 (50%), Gaps = 35/577 (6%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAE 64
IS D ++ C A +G H + +M F+ N ++ Y +C +A
Sbjct: 130 ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR 189
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSFADP 123
+VFDEM +R++ SW ++I YA A+ LF RM+ D + P+S ++ + A
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
LE G+++++ + G + + + L +MY+KC +D A+ ++ N C +
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
Y + +AL +F M+ GV+ D + +C+ L++I G+ H Y ++ G E
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF--- 300
S ++ L+D Y KC R + A + F+ + +W++I+ GY ++G D A ETF
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 301 --KNIRSKGVILNSFVYTNIF-QACSAISDLVYGAQVHADAI------------------ 339
KNI S I++ V ++F +A + V+AD +
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 340 --------KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
K G+ + + ++ M+S+CG + A F ++ D AWTA I A A
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 392 GKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G +E A++LF M+ G++P+ V F+G L ACSH GLV++GK+ SM +GV P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD 510
Y CM+ + RAGLL+EA+++I MP EP+ + W +LL C N+E A+ AA KI L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
P + +YV + N++A AG W++ A+ R M E+ LRK
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRK 706
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 232/518 (44%), Gaps = 48/518 (9%)
Query: 5 CISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFID-NCILQMYCDC---KSF 60
C P S K+ C + L K+FH L + N ++ C+ +S
Sbjct: 31 CTKATPSSLKN----CKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESL 83
Query: 61 TAAERVFDEMVDRDL-FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
+ A+ VF+ F + ++I YA G AI LF RM++ GI P F L +
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
A A G Q+H ++++G+ D+ ++ +L + Y +CG LD A ++M+ +N V+
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 180 TGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
T ++ GY + DA+ LF +M++ E V + V+ ACA L+D+ TG +++++
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
G+E + + LVD Y KC + A + F+ N +A+ + Y + G +AL
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
F + GV + + +CS + ++++G H ++ G + + +A+I MY
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK------------------------- 393
KC + D A++ F + + W +I+ Y +G+
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 394 -------SEAVKLFHKML-RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD 445
EA+++F M + GV + VT + + +AC H G + K + K G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQ 502
Query: 446 PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+ ++ ++SR G + A+ + S+ D +W
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAW 539
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 178/401 (44%), Gaps = 47/401 (11%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD----GAEVATNKMTTKNAVACTGLMVG 185
K H L + G DVS T L + G + EV N + L+ G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
Y + +A+LLF +M+ G+ D++ F L ACA + G QIH VK+G +
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET-FKNIR 304
+ V LV FY++CG ++A + F+ + E N SW+++I GY + A++ F+ +R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+ V NS + AC+ + DL G +V+A G+ SA++ MY KC +D
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A + F + A+ Y G + EA+ +F+ M+ SGVRP+ ++ + +++CS
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 424 -----------HSGLVKEGKQ------------------------FLDSMSVKYGVDPTI 448
H +++ G + D MS K T+
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-----TV 403
Query: 449 DHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+N ++ Y G + A E +MP E + +SW T++ G
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIISG 443
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/592 (29%), Positives = 293/592 (49%), Gaps = 54/592 (9%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAERVF 67
D ++ +FK CG + ++ G+ H L N F+ N ++ MY C+S + A +VF
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSFADPSAL 126
DEM D+ SW +II +YA+ G A+ +FSRM + G +P + +L A
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
LGKQLH + ++ + L +MY KCG +D A + M+ K+ V+ ++ GY
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSI------------------------------ 216
+Q R DA+ LF KM +E +K+D +S
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 217 -----VLKACAALKDINTGRQIHSYSVKLGLE-------SEVSVGTPLVDFYSKCGRFEA 264
VL CA++ + G++IH Y++K ++ E V L+D Y+KC + +
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 265 ACQAFESI--REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL--NSFVYTNIFQ 320
A F+S+ +E + +W+ +I GY Q G +KALE + + N+F +
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 321 ACSAISDLVYGAQVHADAIKK---GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
AC++++ L G Q+HA A++ + ++S + +I MY+KCG + A F + +
Sbjct: 486 ACASLAALRIGKQIHAYALRNQQNAVPLFVS--NCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 378 TIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
+ WT+++ Y HG EA+ +F +M R G + + VT + +L ACSHSG++ +G ++ +
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNL 496
M +GV P +HY C++ + RAG L AL +I MP EP + W L C H +
Sbjct: 604 RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663
Query: 497 ETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
E AA KI L +Y + NL+A AG W + + R +M + ++K
Sbjct: 664 ELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 186/428 (43%), Gaps = 49/428 (11%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNA--VACTGLMVGYT 187
K +H +L+ G +++ + L + YI G L A + +A L+ Y
Sbjct: 45 KLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 188 QALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVS 247
L LF M D + F V KAC + + G H+ S+ G S V
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVF 163
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK- 306
VG LV YS+C A + F+ + + SW++II Y + G+ ALE F + ++
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
G ++ N+ C+++ G Q+H A+ ++Q + + ++ MY+KCG +D A
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHK----------------------- 402
F + D ++W A++ Y+ G+ E AV+LF K
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 403 ------------MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
ML SG++PN VT I +L+ C+ G + GK+ + ++KY +D +
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNG 402
Query: 451 Y-------NCMIGVYSRAGLLQEALEMIRSM-PFEPDTLSWKTLLGGCWSHRNLETASIA 502
+ N +I +Y++ + A M S+ P E D ++W ++GG H + A
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462
Query: 503 AGKIFHLD 510
++F D
Sbjct: 463 LSEMFEED 470
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 9/270 (3%)
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND---FSWS 281
K I+ + IH + G+ + +++ + L+ Y G A P+D + W+
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRF-PPSDAGVYHWN 96
Query: 282 AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK 341
++I Y +G +K L F + S +++ + +F+AC IS + G HA ++
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 342 GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLF 400
G + + +A++ MYS+C L A + F + D ++W +II +YA GK + A+++F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 401 HKMLRS-GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
+M G RP+ +T + +L C+ G GKQ L +V + + NC++ +Y+
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ G++ EA + +M + D +SW ++ G
Sbjct: 276 KCGMMDEANTVFSNMSVK-DVVSWNAMVAG 304
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 281/542 (51%), Gaps = 16/542 (2%)
Query: 17 FKMCGMLGALSDGKLFHNRLQR--MANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
K CG L ++ G++ H +++ + ++ + ++ MY C A R+FDE+ D
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRM-LDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
+ +W++++S + + G A+ F RM + + P TL+ + S LG+ +H
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
+IR GF+ D+S+ +L N Y K A + K+ ++ + ++ Y Q
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+ALL+F M+ +G + + VL+ACAA D+ GR+ H +++ GLE+EV V T LV
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF------KNIRSKG 307
D Y KC E A F I + SW A+I+G+ +G +++E F N R
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+++ + +CS + L H+ IK G ++++ +YS+CG L A
Sbjct: 367 ILM-----VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSG-VRPNAVTFIGLLNACSHS 425
+ F I DT+ WT++I Y HGK ++A++ F+ M++S V+PN VTF+ +L+ACSH+
Sbjct: 422 KVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 481
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
GL+ EG + M Y + P ++HY ++ + R G L A+E+ + MPF P T
Sbjct: 482 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGT 541
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
LLG C H+N E A A K+F L+ + Y+ M N++ + G W+ + R + +R +
Sbjct: 542 LLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 601
Query: 546 RK 547
+K
Sbjct: 602 KK 603
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 218/444 (49%), Gaps = 9/444 (2%)
Query: 57 CKSFTA---AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIF 113
C+ F++ A ++F EM R L+ W T++ + + E + FS M KP +
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 114 CTLLGSFADPSALELGKQLHSQLIR-IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT 172
L + + + G+ +H + + + +D+ + ++L MYIKCG + A +++
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 173 TKNAVACTGLMVGYTQALRHTDALLLFAKMI-KEGVKLDEFVFSIVLKACAALKDINTGR 231
+ V + ++ G+ + A+ F +M+ V D ++ AC L + GR
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSG 291
+H + ++ G +++S+ L++ Y+K F+ A F+ I E + SWS +I Y Q+G
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
+AL F ++ G N + QAC+A DL G + H AI+KGL + +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKM-LRSGVR 409
A++ MY KC + AY F I + D ++W A+I + +G + +++ F M L + R
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
P+A+ + +L +CS G +++ K F S +KYG D ++ +YSR G L A +
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCF-HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 470 MIRSMPFEPDTLSWKTLLGGCWSH 493
+ + + DT+ W +L+ G H
Sbjct: 423 VFNGIALK-DTVVWTSLITGYGIH 445
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 177/339 (52%), Gaps = 9/339 (2%)
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+MT ++ L+ ++ + + L F+ M ++ K D F + LKAC L+++N
Sbjct: 19 EMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNY 78
Query: 230 GRQIHSYSVK-LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC 288
G IH + K + L S++ VG+ L+ Y KCGR A + F+ + +P+ +WS++++G+
Sbjct: 79 GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 138
Query: 289 QSGRFDKALETFKN-IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
++G +A+E F+ + + V + + AC+ +S+ G VH I++G L
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 198
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRS 406
S ++++ Y+K A F I + D I+W+ +I Y +G +EA+ +F+ M+
Sbjct: 199 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G PN T + +L AC+ + +++G++ ++++ G++ + ++ +Y + +E
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRK-THELAIRKGLETEVKVSTALVDMYMKCFSPEE 317
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGC----WSHRNLETASI 501
A + +P D +SW L+ G +HR++E SI
Sbjct: 318 AYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEFSI 355
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 285/565 (50%), Gaps = 43/565 (7%)
Query: 13 YKHLFKMCGMLGALSDGKLFHNRL-QRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMV 71
Y + K CG++G + G L + R+ + G+ + N ++ MY A F E++
Sbjct: 110 YSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEIL 169
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD---PSALE- 127
SW T+IS Y + G M A+ LF RM +P+ + L+ F D P ALE
Sbjct: 170 RPSSTSWNTLISGYCKAGLMDEAVTLFHRM----PQPNVVSWNCLISGFVDKGSPRALEF 225
Query: 128 ------------------------------LGKQLHSQLIRIGFTADVSIETTLSNMYIK 157
+GKQLH +++ G + + L +MY
Sbjct: 226 LVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSN 285
Query: 158 CGWLD-GAEV-ATNKMTTKNAVAC-TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
CG L A+V K+ ++VA ++ G+ + AL L ++ + + D +
Sbjct: 286 CGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTL 345
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
S LK C ++ G Q+HS V G E + VG+ LVD ++ G + A + F +
Sbjct: 346 SGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN 405
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
+ ++S +I G +SG A F+ + G+ + F+ +NI + CS+++ L +G Q+
Sbjct: 406 KDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI 465
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK- 393
H IKKG +A++ MY KCG++D F + + D ++WT II + +G+
Sbjct: 466 HGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRV 525
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
EA + FHKM+ G+ PN VTF+GLL+AC HSGL++E + L++M +YG++P ++HY C
Sbjct: 526 EEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYC 585
Query: 454 MIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLD 513
++ + +AGL QEA E+I MP EPD W +LL C +H+N ++ A K+ P D
Sbjct: 586 VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDD 645
Query: 514 SATYVTMFNLHALAGNWDEAAQYRK 538
+ Y ++ N +A G WD+ ++ R+
Sbjct: 646 PSVYTSLSNAYATLGMWDQLSKVRE 670
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 238/520 (45%), Gaps = 40/520 (7%)
Query: 17 FKMCGMLGALSDGKLFH-NRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDL 75
+ CG + A G+ + +++ + N FI N ++ MY D + + A +VFDEM +R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 76 FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSS-IFCTLLGSFADPSALELGKQLHS 134
+W T++S Y +G AI L+ RMLD + ++ ++ +L + ++LG ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
++ + DV + ++ +MY+K G L A + ++ ++ + L+ GY +A +
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 195 ALLLF------------------------------AKMIKEGVKLDEFVFSIVLKACAAL 224
A+ LF +M +EG+ LD F LKAC+
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS---WS 281
+ G+Q+H VK GLES + L+D YS CG A F + + S W+
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 282 AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK 341
++++G+ + + AL I + +S+ + + C +L G QVH+ +
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 342 GL-VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKL 399
G + Y+ G S ++ +++ G + A++ F + D IA++ +I G S A L
Sbjct: 372 GYELDYIVG-SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 400 FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
F ++++ G+ + +L CS + GKQ + + +K G + ++ +Y
Sbjct: 431 FRELIKLGLDADQFIVSNILKVCSSLASLGWGKQ-IHGLCIKKGYESEPVTATALVDMYV 489
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA 499
+ G + + + M E D +SW ++ G + +E A
Sbjct: 490 KCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEA 528
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 145/327 (44%), Gaps = 35/327 (10%)
Query: 218 LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND 277
L+ C ++ G I ++ +K G+ V + ++ Y A + F+ + E N
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 278 FSWSAIITGYCQSGRFDKALETFKN-IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
+W+ +++GY G+ +KA+E ++ + S+ N F+Y+ + +AC + D+ G V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSE 395
K+ L + ++++ MY K G+L A +F I +P + +W +I Y G E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 396 AVKLFHKMLRSGV--------------RPNAVTFI------GL----------LNACSHS 425
AV LFH+M + V P A+ F+ GL L ACS
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI--RSMPFEPDTLSW 483
GL+ GKQ L VK G++ + + +I +YS G L A ++ + W
Sbjct: 252 GLLTMGKQ-LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 484 KTLLGGCWSHRNLETASIAAGKIFHLD 510
++L G + E A +I+ D
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSD 337
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 264/502 (52%), Gaps = 2/502 (0%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L +YC C A+ +FD+M RD+ SW T+IS YA G+M ++L RM G++
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P F L LE+G+ LH Q+++ GF D+ ++T L MY+KCG + +
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
+ K+ V T ++ G + R AL++F++M++ G L + V+ +CA L
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
+ G +H Y ++ G + L+ Y+KCG + + FE + E + SW+AII+GY
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGY 422
Query: 288 CQSGRFDKALETFKNIRSKGV-ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
Q+ KAL F+ ++ K V ++SF ++ QACS+ L G +H I+ +
Sbjct: 423 AQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPC 482
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLR 405
++A++ MYSKCG L+ A + F +I D ++W +I Y +HGK + A++++ + L
Sbjct: 483 SLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLH 542
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
SG+ PN V F+ +L++CSH+G+V++G + SM +GV+P +H C++ + RA ++
Sbjct: 543 SGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIE 602
Query: 466 EALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHA 525
+A + + P +L C ++ E I + L P D+ YV + + A
Sbjct: 603 DAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFA 662
Query: 526 LAGNWDEAAQYRKMMAERNLRK 547
WD+ ++ M L+K
Sbjct: 663 AMKRWDDVSESWNQMRSLGLKK 684
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 239/486 (49%), Gaps = 12/486 (2%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDCKSFTAAER 65
D ++ L K C L LS G H Q + NG + +I + ++ +Y A +
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQ--QVLVNGFSSDFYISSSLVNLYAKFGLLAHARK 102
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VF+EM +RD+ W +I Y+ G + A L + M GIKP +L + +
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
L+ LH + GF D+++ ++ N+Y KC + A+ ++M ++ V+ ++ G
Sbjct: 163 LQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
Y ++ L L +M +G++ D+ F L + D+ GR +H VK G + +
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
+ + T L+ Y KCG+ EA+ + E+I + W+ +I+G + GR +KAL F +
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDY 365
G L+S ++ +C+ + GA VH ++ G +++ITMY+KCG LD
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 366 AYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKM-LRSGVRPNAVTFIGLLNACS 423
+ F + + D ++W AII YA + +A+ LF +M ++ + ++ T + LL ACS
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+G + GK + + ++ + P ++ +YS+ G L+ A S+ ++ D +SW
Sbjct: 460 SAGALPVGK-LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSW 517
Query: 484 KTLLGG 489
L+ G
Sbjct: 518 GILIAG 523
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 212/450 (47%), Gaps = 8/450 (1%)
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGF 141
I+ + G + FS ML + P + F +LL + A L G +H Q++ GF
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 142 TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAK 201
++D I ++L N+Y K G L A +M ++ V T ++ Y++A +A L +
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR 261
M +G+K +L+ + + +I + +H ++V G + +++V +++ Y KC
Sbjct: 138 MRFQGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 262 FEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA 321
A F+ + + + SW+ +I+GY G + L+ +R G+ + +
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAW 381
+ DL G +H +K G + ++A+ITMY KCGK + +Y+ TI D + W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 382 TAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
T +I G++E A+ +F +ML+SG ++ ++ +C+ G G + +
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS-VHGYVL 373
Query: 441 KYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETAS 500
++G N +I +Y++ G L ++L + M E D +SW ++ G + +L A
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYAQNVDLCKAL 432
Query: 501 I--AAGKIFHLDPLDSATYVTMFNLHALAG 528
+ K + +DS T V++ + AG
Sbjct: 433 LLFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQR-MANGNKFIDNCILQMYCDCKSFTAAERV 66
+D + L + C GAL GKL H + R +D ++ MY C AA+R
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
FD + +D+ SW +I+ Y G A+ ++S L G++P+ IF +L S + +
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMV 565
Query: 127 ELGKQLHSQLIR 138
+ G ++ S ++R
Sbjct: 566 QQGLKIFSSMVR 577
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/572 (29%), Positives = 280/572 (48%), Gaps = 37/572 (6%)
Query: 14 KHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR 73
K L K + + S K H + R + + + ++ +Y + K A +F +
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
+ +W ++I + ++ A+ F M G P ++F ++L S L G+ +H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 134 SQLIRIGFTADVSIETTLSNMYIKC----------------------------------- 158
++R+G D+ L NMY K
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 159 -GWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIV 217
+D M K+ V+ ++ GY Q+ + DAL + +M +K D F S V
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 218 LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND 277
L + D+ G++IH Y ++ G++S+V +G+ LVD Y+K R E + + F + +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
SW++++ GY Q+GR+++AL F+ + + V + ++++ AC+ ++ L G Q+H
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EA 396
++ G + SA++ MYSKCG + A + F + D ++WTAII +A HG EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
V LF +M R GV+PN V F+ +L ACSH GLV E + +SM+ YG++ ++HY +
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
Query: 457 VYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSAT 516
+ RAG L+EA I M EP W TLL C H+NLE A A KIF +D +
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGA 548
Query: 517 YVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
YV M N++A G W E A+ R M ++ LRK+
Sbjct: 549 YVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 195/418 (46%), Gaps = 40/418 (9%)
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
S ++ TL+ + + KQLH+Q IR + S +S +Y L A +
Sbjct: 4 SKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVIS-IYTNLKLLHEALLLF 62
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
+ + +A ++ +T + AL F +M G D VF VLK+C + D+
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSK---------CGR------------------ 261
G +H + V+LG++ ++ G L++ Y+K G
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 262 ---------FEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
++ + FE + + S++ II GY QSG ++ AL + + + + +S
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
F +++ S D++ G ++H I+KG+ + S+++ MY+K +++ + + F
Sbjct: 243 FTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 373 IEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEG 431
+ D I+W +++ Y +G+ +EA++LF +M+ + V+P AV F ++ AC+H + G
Sbjct: 303 LYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 362
Query: 432 KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
KQ L ++ G I + ++ +YS+ G ++ A ++ M D +SW ++ G
Sbjct: 363 KQ-LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMG 418
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 279/536 (52%), Gaps = 10/536 (1%)
Query: 20 CGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
C +L L GK H + R + + N ++ Y C AA ++F+ M ++++ SW
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISW 318
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
T++S Y + A+ LF+ M G+KP ++L S A AL G Q+H+ I+
Sbjct: 319 TTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK 378
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY----TQALRHTD 194
D + +L +MY KC L A + + V ++ GY TQ H +
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH-E 437
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVD 254
AL +F M ++ F +L+A A+L + +QIH K GL ++ G+ L+D
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 255 FYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFV 314
YS C + + F+ ++ + W+++ GY Q ++AL F ++ + F
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE 374
+ N+ A ++ + G + H +K+GL +A++ MY+KCG + A++AF +
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 375 KPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEG-K 432
D + W ++I +YA HG+ +A+++ KM+ G+ PN +TF+G+L+ACSH+GLV++G K
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWS 492
QF + +++G++P +HY CM+ + RAG L +A E+I MP +P + W++LL GC
Sbjct: 678 QF--ELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 493 HRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
N+E A AA DP DS ++ + N++A G W EA + R+ M + KE
Sbjct: 736 AGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 234/457 (51%), Gaps = 15/457 (3%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
+ ++ N ++ +Y A +VF++M +R+L SW+T++SA G ++ +F L
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF---L 134
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGK------QLHSQLIRIGFTADVSIETTLSNMYI 156
+ S +L SF + G+ QL S L++ GF DV + T L + Y+
Sbjct: 135 EFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYL 194
Query: 157 KCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSI 216
K G +D A + + + K+ V T ++ G + R +L LF +++++ V D ++ S
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
VL AC+ L + G+QIH++ ++ GLE + S+ L+D Y KCGR AA + F + N
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
SW+ +++GY Q+ +A+E F ++ G+ + + ++I +C+++ L +G QVHA
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-- 394
IK L +++I MY+KC L A + F D + + A+I Y+ G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 395 --EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYN 452
EA+ +F M +RP+ +TF+ LL A + + KQ + + KYG++ I +
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ-IHGLMFKYGLNLDIFAGS 493
Query: 453 CMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+I VYS L+++ + M + D + W ++ G
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 200/438 (45%), Gaps = 46/438 (10%)
Query: 113 FCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT 172
F LL A L +H Q+I G D + L N+Y + G + A KM
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 173 TKNAVACTGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTGR 231
+N V+ + ++ + ++L++F + + +E++ S ++AC+ L GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGR 164
Query: 232 ----QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
Q+ S+ VK G + +V VGT L+DFY K G + A F+++ E + +W+ +I+G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
+ GR +L+ F + V+ + ++ + + ACS + L G Q+HA ++ GL
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRS 406
S + +I Y KCG++ A++ F + + I+WT ++ Y + EA++LF M +
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK-------YGVDPTIDHY-------- 451
G++P+ +L +C+ + G Q + + ++K Y + ID Y
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQ-VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 452 ----------------NCMIGVYSRAGL---LQEALEMIRSMPF---EPDTLSWKTLLGG 489
N MI YSR G L EAL + R M F P L++ +LL
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 490 CWSHRNLETASIAAGKIF 507
S +L + G +F
Sbjct: 464 SASLTSLGLSKQIHGLMF 481
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 249/445 (55%), Gaps = 6/445 (1%)
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G+ S+ + L+ A+ G + L G + + L NMY+K L+ A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
++M +N ++ T ++ Y++ H AL L M+++ V+ + + +S VL++C +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
D+ R +H +K GLES+V V + L+D ++K G E A F+ + + W++II
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
G+ Q+ R D ALE FK ++ G I T++ +AC+ ++ L G Q H +K
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD-- 290
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKM 403
Q L +A++ MY KCG L+ A + F +++ D I W+ +I A +G S EA+KLF +M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
SG +PN +T +G+L ACSH+GL+++G + SM YG+DP +HY CMI + +AG
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
L +A++++ M EPD ++W+TLLG C RN+ A AA K+ LDP D+ TY + N+
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNI 470
Query: 524 HALAGNWDEAAQYRKMMAERNLRKE 548
+A + WD + R M +R ++KE
Sbjct: 471 YANSQKWDSVEEIRTRMRDRGIKKE 495
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 190/385 (49%), Gaps = 14/385 (3%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNK---FIDNCILQMYCDCKSFTAAER 65
D +Y L K C A+ +G L L NG++ F+ N ++ MY A +
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHL--YFNGHRPMMFLVNVLINMYVKFNLLNDAHQ 117
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
+FD+M R++ SW T+ISAY++ A+ L ML ++P+ + ++L S S
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
+ + LH +I+ G +DV + + L +++ K G + A ++M T +A+ ++ G
Sbjct: 178 VRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 234
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
+ Q R AL LF +M + G ++ + VL+AC L + G Q H + VK + +
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQD 292
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
+ + LVD Y KCG E A + F ++E + +WS +I+G Q+G +AL+ F+ ++S
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK--GLVQYLSGESAMITMYSKCGKL 363
G N + ACS + L+ + ++KK G+ MI + K GKL
Sbjct: 353 SGTKPNYITIVGVLFACSH-AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 364 DYAYQAFLTIE-KPDTIAWTAIICA 387
D A + +E +PD + W ++ A
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 9/284 (3%)
Query: 12 SYKHLFKMCGMLGALSDGKLFH-NRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
+Y + + C +SD ++ H ++ + F+ + ++ ++ A VFDEM
Sbjct: 164 TYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
V D W +II +A+ A+ LF RM G + ++L + + LELG
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
Q H +++ + D+ + L +MY KCG L+ A N+M ++ + + ++ G Q
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL-GLESEVSVG 249
+AL LF +M G K + VL AC+ + G KL G++
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 250 TPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGR 292
++D K G+ + A + + EP+ +W ++ G C+ R
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQR 441
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 275/542 (50%), Gaps = 5/542 (0%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAERVF 67
+PR+ + F+ C LGAL +G+ H ++ +KF+ + + Y + + A F
Sbjct: 229 NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
E+ D D+FSW +II++ A G M + +F M + G+ P + L+ +
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK-NAVACTGLMVGY 186
GK H +IR F+ D ++ +L +MY K L AE +++ + N A ++ GY
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ H + LF K+ G+++D + V+ +C+ + + G+ +H Y VK L+ +
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
SV L+D Y K G A + F + N +W+A+I Y + +KA+ F + S+
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSE 527
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
+S + AC L G +H + LS +A+I MY+KCG L+ +
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
+ F + D + W +I Y HG E A+ LF +M S V+P TF+ LL+AC+H+
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
GLV++GK+ M +Y V P + HY+C++ + SR+G L+EA + SMPF PD + W T
Sbjct: 648 GLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGT 706
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
LL C +H E A + DP + Y+ + N+++ AG W+EA + R+MM E +
Sbjct: 707 LLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
Query: 546 RK 547
K
Sbjct: 767 GK 768
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 222/462 (48%), Gaps = 8/462 (1%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
N + + Y C A VFDEM DRD+ +W IIS + + G G + +M
Sbjct: 160 NTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMH 219
Query: 103 DLGI---KPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG 159
G KP+ + ++ AL+ G+ LH ++ G + +++++ + Y K G
Sbjct: 220 SAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSG 279
Query: 160 WLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
A ++ ++ ++ + T ++ ++ ++ +F +M +G+ D V S ++
Sbjct: 280 NPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN 339
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP-NDF 278
+ + G+ H + ++ + +V L+ Y K A + F I E N
Sbjct: 340 ELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE 399
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
+W+ ++ GY + K +E F+ I++ G+ ++S T++ +CS I ++ G +H
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AV 397
+K L +S +++I +Y K G L A++ F + + I W A+I +Y + +SE A+
Sbjct: 460 VKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAI 518
Query: 398 KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGV 457
LF +M+ +P+++T + LL AC ++G ++ G Q + + + + +I +
Sbjct: 519 ALFDRMVSENFKPSSITLVTLLMACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDM 577
Query: 458 YSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA 499
Y++ G L+++ E+ + + D + W ++ G H ++E+A
Sbjct: 578 YAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVESA 618
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 208/453 (45%), Gaps = 13/453 (2%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
N F+ + ++ Y + RVF + RD+F W +II A+ G ++ F ML
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRI-GFTADVSIETTLSNMYIKCGWL 161
G P ++ + A+ +G +H +++ GF + ++ + Y KCG+L
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 162 DGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDE---FVFSIVL 218
A + ++M ++ VA T ++ G+ Q L KM G +D+
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF 237
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
+AC+ L + GR +H ++VK GL S V + + FYSK G A +F + + + F
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
SW++II +SG +++ + F +++KG+ + V + + + + G H
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI-EKPDTIAWTAIICAYA-YHGKSEA 396
I+ + +++++MY K L A + F I E+ + AW ++ Y +
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
++LF K+ G+ ++ + ++++CSH G V GK L VK +D TI N +I
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS-LHCYVVKTSLDLTISVVNSLID 476
Query: 457 VYSRAGLLQEALEMIRSMPFEPDT--LSWKTLL 487
+Y + G L A M E DT ++W ++
Sbjct: 477 LYGKMGDLTVAWRMF----CEADTNVITWNAMI 505
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 10/372 (2%)
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+LE ++ ++ +I G + ++ + + L + Y G + + + +T ++ ++
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG-LE 243
+ + +L F M+ G D F +V+ ACA L + G +H +K G +
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
+VG V FYSKCG + AC F+ + + + +W+AII+G+ Q+G + L +
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 304 RSKGVIL---NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKC 360
S G + N FQACS + L G +H A+K GL +S+M + YSK
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLL 419
G AY +F + D +WT+II + A G E+ +F +M G+ P+ V L+
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 420 NACSHSGLVKEGKQFLDSMSVK--YGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
N LV +GK F ++ + +D T+ N ++ +Y + LL A ++ + E
Sbjct: 339 NELGKMMLVPQGKAF-HGFVIRHCFSLDSTV--CNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 478 PDTLSWKTLLGG 489
+ +W T+L G
Sbjct: 396 GNKEAWNTMLKG 407
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
S++L C + + R+ ++ + GL + V + L+ Y+ G+ + + F +
Sbjct: 30 SVIL--CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR 87
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
+ F W++II + +G + ++L F ++ G + F + AC+ + G V
Sbjct: 88 RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFV 147
Query: 335 HADAIKKGLVQYLSGESA-MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK 393
H +K G + A + YSKCG L A F + D +AWTAII + +G+
Sbjct: 148 HGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 394 SE-AVKLFHKMLRSGV---RPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
SE + KM +G +PN T ACS+ G +KEG+ L +VK G+ +
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGR-CLHGFAVKNGLASSKF 266
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
+ M YS++G EA R + E D SW +++
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDE-DMFSWTSII 303
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 272/509 (53%), Gaps = 9/509 (1%)
Query: 41 NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSR 100
+G+K +D + C A +VFD M +R + +W ++I+ + A+ ++
Sbjct: 101 SGSKLVDASL-----KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRL 155
Query: 101 MLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGF-TADVSIETTLSNMYIKCG 159
M+ + P ++ +F+D S + ++ H + +G ++V + + L +MY+K G
Sbjct: 156 MITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFG 215
Query: 160 WLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
A++ +++ K+ V T L+VGY+Q T+A+ F M+ E V+ +E+ ++ VL
Sbjct: 216 KTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLI 275
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS 279
+C LKDI G+ IH VK G ES ++ T L+ Y +C + + + F+ I PN S
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAI 339
W+++I+G Q+GR + AL F+ + + NSF ++ + CS ++ G Q+H
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 340 KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVK 398
K G + S +I +Y KCG D A F T+ + D I+ +I +YA +G EA+
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVY 458
LF +M+ G++PN VT + +L AC++S LV+EG + DS K + T DHY CM+ +
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLL 514
Query: 459 SRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYV 518
RAG L+EA EM+ + PD + W+TLL C HR +E A KI ++P D T +
Sbjct: 515 GRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573
Query: 519 TMFNLHALAGNWDEAAQYRKMMAERNLRK 547
M NL+A G W+ + + M + L+K
Sbjct: 574 LMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 2/282 (0%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNC-ILQMYCDCKSFTAAERVFDEM 70
+Y + CG L + +GKL H + + + +L MY C + RVF +
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
+ SW ++IS + G A+ F +M+ IKP+S + L ++ + E G+
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
Q+H + + GF D + L ++Y KCG D A + + ++ + ++ ++ Y Q
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
+AL LF +MI G++ ++ VL AC + + G ++ K +
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYA 508
Query: 251 PLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
+VD + GR E A + P+ W +++ C+ R
Sbjct: 509 CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA-CKVHR 549
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 274/513 (53%), Gaps = 9/513 (1%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
N F N I++ Y A ++FDE+ D S+ T+IS YA+ A+ LF RM
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL- 161
LG + L+ + D ++L KQLH + GF + S+ Y K G L
Sbjct: 133 KLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 162 DGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
+ V ++ V+ ++V Y Q AL L+ +MI +G K+D F + VL A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 222 AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEA---ACQAFESIREPNDF 278
+L + GRQ H +K G VG+ L+DFYSKCG + + + F+ I P+
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 279 SWSAIITGYCQSGRF-DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
W+ +I+GY + ++A+++F+ ++ G + + + ACS +S Q+H
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 338 AIKKGLV-QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SE 395
AIK + +S +A+I++Y K G L A F + + + +++ +I YA HG +E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 396 AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMI 455
A+ L+ +ML SG+ PN +TF+ +L+AC+H G V EG+++ ++M + ++P +HY+CMI
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 456 GVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSA 515
+ RAG L+EA I +MP++P +++W LLG C H+N+ A AA ++ + PL +
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 516 TYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
YV + N++A A W+E A RK M + +RK+
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKK 583
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 211/467 (45%), Gaps = 46/467 (9%)
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA-------- 167
LL S A+ L GK LH+ ++ + + N+Y KCG L A A
Sbjct: 15 LLKSVAERD-LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 168 -----------------------TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK 204
+++ + V+ L+ GY A A++LF +M K
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 205 EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEA 264
G ++D F S ++ AC D+ +Q+H +SV G +S SV V +YSK G
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 265 ACQAFESIREPND-FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS 323
A F + E D SW+++I Y Q KAL +K + KG ++ F ++ A +
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 324 AISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY---QAFLTIEKPDTIA 380
++ L+ G Q H IK G Q S +I YSKCG D Y + F I PD +
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 381 WTAIICAYAYHGK--SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
W +I Y+ + + EAVK F +M R G RP+ +F+ + +ACS+ + KQ + +
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ-IHGL 370
Query: 439 SVKYGVDPT-IDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLE 497
++K + I N +I +Y ++G LQ+A + MP E + +S+ ++ G H +
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGT 429
Query: 498 TASIAAGKIFH--LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
A + ++ + P + T+V + + A G DE +Y M E
Sbjct: 430 EALLLYQRMLDSGIAP-NKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 38/312 (12%)
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
F +L A +D+ TG+ +H+ VK + S + V+ YSKCGR A AF S
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 273 REPNDFSWSAIITGYCQSGR-------FDK------------------------ALETFK 301
EPN FS++ I+ Y + + FD+ A+ FK
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+R G ++ F + + AC DL+ Q+H ++ G Y S +A +T YSK G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 362 KLDYAYQAFLTIEK-PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLL 419
L A F +++ D ++W ++I AY H + ++A+ L+ +M+ G + + T +L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL--EMIRSMPFE 477
NA + + G+QF + +K G + +I YS+ G E +
Sbjct: 248 NALTSLDHLIGGRQFHGKL-IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 478 PDTLSWKTLLGG 489
PD + W T++ G
Sbjct: 307 PDLVVWNTMISG 318
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 281/539 (52%), Gaps = 36/539 (6%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
+K I+ CIL + + A VF + + +L W T+ +A + A++L+ M+
Sbjct: 69 SKLIEFCILSPHFE--GLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI 126
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG--- 159
LG+ P+S F +L S A A + G+Q+H ++++G D+ + T+L +MY++ G
Sbjct: 127 SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLE 186
Query: 160 ----------------------------WLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
+++ A+ +++ K+ V+ ++ GY +
Sbjct: 187 DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN 246
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
+ +AL LF M+K V+ DE V+ ACA I GRQ+H + G S + +
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNA 306
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILN 311
L+D YSKCG E AC FE + + SW+ +I GY + +AL F+ + G N
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366
Query: 312 SFVYTNIFQACSAISDLVYGAQVHA--DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
+I AC+ + + G +H D KG+ S +++I MY+KCG ++ A+Q
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 370 FLTIEKPDTIAWTAIICAYAYHGKSEA-VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F +I +W A+I +A HG+++A LF +M + G++P+ +TF+GLL+ACSHSG++
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
G+ +M+ Y + P ++HY CMI + +GL +EA EMI M EPD + W +LL
Sbjct: 487 DLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLK 546
Query: 489 GCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
C H N+E A + ++P + +YV + N++A AG W+E A+ R ++ ++ ++K
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK 605
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 158/318 (49%), Gaps = 47/318 (14%)
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEA---ACQAFESIR 273
+L C L+ + R IH+ +K+GL + + L++F FE A F++I+
Sbjct: 39 LLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 274 EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQ 333
EPN W+ + G+ S AL+ + + S G++ NS+ + + ++C+ G Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 334 VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF----------------------- 370
+H +K G L +++I+MY + G+L+ A++ F
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 371 ------LTIEKP--DTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
L E P D ++W A+I YA G EA++LF M+++ VRP+ T + +++A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 422 CSHSGLVKEGKQ---FLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEP 478
C+ SG ++ G+Q ++D +G + N +I +YS+ G L+ A + +P++
Sbjct: 276 CAQSGSIELGRQVHLWIDD----HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK- 330
Query: 479 DTLSWKTLLGGCWSHRNL 496
D +SW TL+GG ++H NL
Sbjct: 331 DVISWNTLIGG-YTHMNL 347
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 334 VHADAIKKGLVQYLSGESAMI---TMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY 390
+HA IK GL S +I + L YA F TI++P+ + W + +A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 391 HGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
A+KL+ M+ G+ PN+ TF +L +C+ S KEG+Q + +K G D +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ-IHGHVLKLGCDLDLY 170
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL 509
+ +I +Y + G L++A ++ P D +S+ L+ G S +E A K+F
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHR-DVVSYTALIKGYASRGYIENAQ----KLFDE 225
Query: 510 DPL-DSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEVS 550
P+ D ++ M + +A GN+ EA + K M + N+R + S
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 171/590 (28%), Positives = 282/590 (47%), Gaps = 80/590 (13%)
Query: 36 LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDE--MVDRDLFSWATIISAYAEEGHMIG 93
++ +K ++ YC T A VF++ + RD + +I+ ++
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS 131
Query: 94 AIRLFSRMLDLGIKPSSSIFCTLLGSFA-------------------------------- 121
AI LF +M G KP + F ++L A
Sbjct: 132 AINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 122 --------DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD-GAEVATNKMT 172
PS L +++ +++ D TT+ Y+K G+ D G E+
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILE----KDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 173 TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQ 232
VA ++ GY + +AL + +M+ G++LDEF + V++ACA + G+Q
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 233 IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
+H+Y ++ + LV Y KCG+F+ A FE + + SW+A+++GY SG
Sbjct: 308 VHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 293 FDKALETFKNIRSK----------GVILNSF---------------------VYTNIFQA 321
+A FK ++ K G+ N F ++ ++
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAW 381
C+ + G Q HA +K G LS +A+ITMY+KCG ++ A Q F T+ D+++W
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 382 TAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
A+I A HG +EAV ++ +ML+ G+RP+ +T + +L ACSH+GLV +G+++ DSM
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 441 KYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETAS 500
Y + P DHY +I + R+G +A +I S+PF+P W+ LL GC H N+E
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 501 IAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEVS 550
IAA K+F L P TY+ + N+HA G W+E A+ RK+M +R ++KEV+
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVA 656
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 199/464 (42%), Gaps = 78/464 (16%)
Query: 101 MLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW 160
++ G +P + I L+ + S L +QL ++ D TT+ + Y G
Sbjct: 40 IITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISE----PDKIARTTMVSGYCASGD 95
Query: 161 LDGAEVATNK--MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVL 218
+ A K + ++ V ++ G++ A+ LF KM EG K D F F+ VL
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 219 KACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFYSKCGR----FEAACQAFESIR 273
A + D Q H+ ++K G SV LV YSKC +A + F+ I
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 274 EPNDFSWSAIITGYCQSGRFD--------------------------------KALETFK 301
E ++ SW+ ++TGY ++G FD +ALE +
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ S G+ L+ F Y ++ +AC+ L G QVHA +++ + +++++++Y KCG
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYYKCG 334
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK---------------------------- 393
K D A F + D ++W A++ Y G
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAE 394
Query: 394 ----SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
E +KLF M R G P F G + +C+ G G+Q+ + +K G D ++
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL-LKIGFDSSLS 453
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
N +I +Y++ G+++EA ++ R+MP D++SW L+ H
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQH 496
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 140/324 (43%), Gaps = 53/324 (16%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAER 65
I +D +Y + + C G L GK H + R + + DN ++ +Y C F A
Sbjct: 282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARA 341
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGA------------------------------- 94
+F++M +DL SW ++S Y GH+ A
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 95 IRLFSRMLDLGIKPSSSIF------CTLLGSFADPSALELGKQLHSQLIRIGFTADVSIE 148
++LFS M G +P F C +LG++ + G+Q H+QL++IGF + +S
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN------GQQYHAQLLKIGFDSSLSAG 455
Query: 149 TTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVK 208
L MY KCG ++ A M ++V+ L+ Q +A+ ++ +M+K+G++
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHS-----YSVKLGLESEVSVGTPLVDFYSKCGRFE 263
D VL AC+ ++ GR+ Y + G + L+D + G+F
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR----LIDLLCRSGKFS 571
Query: 264 AACQAFESIR-EPNDFSWSAIITG 286
A ES+ +P W A+++G
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSG 595
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 139/345 (40%), Gaps = 76/345 (22%)
Query: 218 LKACAALK--DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
L+ C L+ + R +H + G + + L+D Y K A Q F+ I EP
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 276 NDFSWSAIITGYCQSGR-------FDK--------------------------ALETFKN 302
+ + + +++GYC SG F+K A+ F
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 303 IRSKGVILNSFVYTNIFQACSAIS-DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
++ +G ++F + ++ + ++ D Q HA A+K G S +A++++YSKC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 362 K----LDYAYQAFLTIEKPDTIAWTAIICAYAYHG------------------------- 392
L A + F I + D +WT ++ Y +G
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 393 --------KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
EA+++ +M+ SG+ + T+ ++ AC+ +GL++ GKQ V
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV--HAYVLRRE 316
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
D + N ++ +Y + G EA + MP + D +SW LL G
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/553 (30%), Positives = 291/553 (52%), Gaps = 11/553 (1%)
Query: 1 MDEACISIDPRSYKHLFKMC-GMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M A + D +Y C G G L +L ++ + + N + MY S
Sbjct: 165 MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHM-IGAIRLFSRMLDLGIKPSSSIFCTLLG 118
F A RVFDEM +D+ SW +++S ++EG A+ +F M+ G++ F +++
Sbjct: 225 FRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVIT 284
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+ + L+L +Q+H I+ G+ + + + L + Y KCG L+ + ++M+ +N V+
Sbjct: 285 TCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVS 344
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
T ++ + DA+ +F M +GV +E F ++ A + I G +IH +
Sbjct: 345 WTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCI 399
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
K G SE SVG + Y+K E A +AFE I SW+A+I+G+ Q+G +AL+
Sbjct: 400 KTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALK 459
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVY--GAQVHADAIKKGLVQYLSGESAMITM 356
F + ++ + N + + ++ A + D+ G + HA +K GL SA++ M
Sbjct: 460 MFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLRSGVRPNAVTF 415
Y+K G +D + + F + + + WT+II AY+ HG E V LFHKM++ V P+ VTF
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP 475
+ +L AC+ G+V +G + + M Y ++P+ +HY+CM+ + RAG L+EA E++ +P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 476 FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQ 535
P +++LG C H N++ + A + P S +YV M+N++A WD+AA+
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAE 698
Query: 536 YRKMMAERNLRKE 548
RK M ++N+ KE
Sbjct: 699 IRKAMRKKNVSKE 711
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 241/503 (47%), Gaps = 18/503 (3%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ N ++ MY F A +F+ +VD D+ SW TI+S + + A+ RM G
Sbjct: 113 VSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAG 169
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+ + + T L LG QL S +++ G +D+ + + MY + G GA
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 166 VATNKMTTKNAVACTGLMVGYTQ-ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
++M+ K+ ++ L+ G +Q +A+++F M++EGV+LD F+ V+ C
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
D+ RQIH +K G ES + VG L+ YSKCG EA F + E N SW+ +I
Sbjct: 290 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI 349
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
S D A+ F N+R GV N + + A + G ++H IK G V
Sbjct: 350 -----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV 404
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKM 403
S ++ IT+Y+K L+ A +AF I + I+W A+I +A +G S EA+K+F
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 404 LRSGVRPNAVTFIGLLNACSHSG--LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
+ PN TF +LNA + + VK+G Q + +K G++ + ++ +Y++
Sbjct: 465 -AAETMPNEYTFGSVLNAIAFAEDISVKQG-QRCHAHLLKLGLNSCPVVSSALLDMYAKR 522
Query: 462 GLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIF--HLDPLDSATYVT 519
G + E+ ++ M + + W +++ SH + ET K+ ++ P D T+++
Sbjct: 523 GNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAP-DLVTFLS 580
Query: 520 MFNLHALAGNWDEAAQYRKMMAE 542
+ G D+ + MM E
Sbjct: 581 VLTACNRKGMVDKGYEIFNMMIE 603
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 183/367 (49%), Gaps = 14/367 (3%)
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
L+ G Q+H GFT+ V + + MY K G D A + + V+ ++ G
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 151
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
+ + AL +M GV D F +S L C + G Q+ S VK GLES+
Sbjct: 152 FDD---NQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFD-KALETFKNIR 304
+ VG + YS+ G F A + F+ + + SW+++++G Q G F +A+ F+++
Sbjct: 209 LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMM 268
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+GV L+ +T++ C +DL Q+H IK+G L + +++ YSKCG L+
Sbjct: 269 REGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLE 328
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
F + + + ++WT +I + K +AV +F M GV PN VTF+GL+NA
Sbjct: 329 AVKSVFHQMSERNVVSWTTMISS----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKC 384
Query: 425 SGLVKEGKQFLDSMSVKYGV--DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
+ +KEG + + + +K G +P++ N I +Y++ L++A + + F + +S
Sbjct: 385 NEQIKEGLK-IHGLCIKTGFVSEPSVG--NSFITLYAKFEALEDAKKAFEDITFR-EIIS 440
Query: 483 WKTLLGG 489
W ++ G
Sbjct: 441 WNAMISG 447
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 277/543 (51%), Gaps = 4/543 (0%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFI-DNCILQMYCDCKSFTAAERVF 67
D ++ + K C + GK H ++ ++ + + I N ++ MY + A RVF
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI-KPSSSIFCTLLGSFADPSAL 126
+ +DL SW++II+ +++ G A+ ML G+ P+ IF + L + +
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
+ G Q+H I+ + +L +MY +CG+L+ A +++ + + ++ G
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+A+ +F++M G D +L A ++ G QIHSY +K G +++
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADL 406
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPND-FSWSAIITGYCQSGRFDKALETFKNIRS 305
+V L+ Y+ C FE R D SW+ I+T Q + + L FK +
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLV 466
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDY 365
+ N+ + C IS L G+QVH ++K GL ++ +I MY+KCG L
Sbjct: 467 SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQ 526
Query: 366 AYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
A + F +++ D ++W+ +I YA G EA+ LF +M +G+ PN VTF+G+L ACSH
Sbjct: 527 ARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSH 586
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWK 484
GLV+EG + +M ++G+ PT +H +C++ + +RAG L EA I M EPD + WK
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 485 TLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERN 544
TLL C + N+ A AA I +DP +S +V + ++HA +GNW+ AA R M + +
Sbjct: 647 TLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHD 706
Query: 545 LRK 547
++K
Sbjct: 707 VKK 709
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 246/486 (50%), Gaps = 6/486 (1%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAAERV 66
I R+Y L C +L+ G+ H+ L + ++N IL MY C S A V
Sbjct: 65 IRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREV 124
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
FD M +R+L S+ ++I+ Y++ G AIRL+ +ML + P F +++ + A S +
Sbjct: 125 FDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
LGKQLH+Q+I++ ++ + + L MY++ + A + K+ ++ + ++ G+
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 187 TQALRHTDALLLFAKMIKEGV-KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
+Q +AL +M+ GV +E++F LKAC++L + G QIH +K L
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
G L D Y++CG +A + F+ I P+ SW+ II G +G D+A+ F +RS
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDY 365
G I ++ ++ A + L G Q+H+ IK G + L+ ++++TMY+ C L
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 366 AYQAFLTIE-KPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
+ F D+++W I+ A H + E ++LF ML S P+ +T LL C
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+K G Q + S+K G+ P N +I +Y++ G L +A + SM D +SW
Sbjct: 485 EISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSW 542
Query: 484 KTLLGG 489
TL+ G
Sbjct: 543 STLIVG 548
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 197/385 (51%), Gaps = 3/385 (0%)
Query: 113 FCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT 172
+ +L+ + + +L G+++H ++ D + + +MY KCG L A + M
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 173 TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQ 232
+N V+ T ++ GY+Q + +A+ L+ KM++E + D+F F ++KACA+ D+ G+Q
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 233 IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
+H+ +KL S + L+ Y + + A + F I + SWS+II G+ Q G
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 293 FDKALETFKNIRSKGVI-LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
+AL K + S GV N +++ + +ACS++ YG+Q+H IK L
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRP 410
++ MY++CG L+ A + F IE+PDT +W II A +G + EAV +F +M SG P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 411 NAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
+A++ LL A + + +G Q + S +K+G + N ++ +Y+ L +
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQ-IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 471 IRSMPFEPDTLSWKTLLGGCWSHRN 495
D++SW T+L C H
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQ 453
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 286/547 (52%), Gaps = 7/547 (1%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERV 66
+D S+ L K + G+ H + + N ++ + ++ MY C+ A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM-LDLGIKPSSSIFCTLLGSFADPSA 125
F E+ + + SW +I+ + + + A L M + + + F LL DP
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL-DGAEVATNKMTTKNAVACTGLMV 184
L KQ+H++++++G +++I + + Y CG + D V +K+ ++ ++
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
G+++ A LF +M + V+ D + ++ +L AC+ + G+ +H +K GLE
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 245 EVSVGTPLVDFYSK--CGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
S L+ Y + G E A FES++ + SW++IITG+ Q G + A++ F
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSY 398
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+RS + ++ + ++ + ++CS ++ L G Q+HA A K G V S++I MYSKCG
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 363 LDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLN 420
++ A + F I K T+AW A+I YA HG + ++ LF +M V+ + VTF +L
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
ACSH+GL++EG + L+ M Y + P ++HY + + RAGL+ +A E+I SMP PD
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDP 578
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
+ KT LG C + +E A+ A + ++P D TYV++ ++++ W+E A +KMM
Sbjct: 579 MVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMM 638
Query: 541 AERNLRK 547
ER ++K
Sbjct: 639 KERGVKK 645
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 226/454 (49%), Gaps = 6/454 (1%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
++ N IL Y A +FDEM RD SW T+IS Y G + A LF+ M
Sbjct: 36 YVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRS 95
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G F LL A +LG+Q+H +I+ G+ +V + ++L +MY KC ++ A
Sbjct: 96 GSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA 155
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKM-IKEGVKLDEFVFSIVLKACAA 223
A +++ N+V+ L+ G+ Q A L M +K V +D F+ +L
Sbjct: 156 FEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDD 215
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF-SWSA 282
N +Q+H+ +KLGL+ E+++ ++ Y+ CG A + F+ + D SW++
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
+I G+ + + A E F ++ V + + YT + ACS ++G +H IKKG
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Query: 343 LVQYLSGESAMITMYSK--CGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKL 399
L Q S +A+I+MY + G ++ A F +++ D I+W +II +A G SE AVK
Sbjct: 336 LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKF 395
Query: 400 FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
F + S ++ + F LL +CS ++ G+Q + +++ K G + +I +YS
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ-IHALATKSGFVSNEFVISSLIVMYS 454
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
+ G+++ A + + + + T++W ++ G H
Sbjct: 455 KCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 190/365 (52%), Gaps = 13/365 (3%)
Query: 133 HSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRH 192
H I+ G +D+ + + + YIK G+L A + ++M +++V+ ++ GYT +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 193 TDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPL 252
DA LF M + G +D + FS +LK A++K + G Q+H +K G E V VG+ L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK-GVILN 311
VD Y+KC R E A +AF+ I EPN SW+A+I G+ Q A + K V ++
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 312 SFVYTNIFQACSAISDLVYG---AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
+ + + + + D ++ QVHA +K GL ++ +AMI+ Y+ CG + A +
Sbjct: 203 AGTFAPLL---TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 369 AFLTI-EKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
F + D I+W ++I ++ H K A +LF +M R V + T+ GLL+ACS
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSR--AGLLQEALEMIRSMPFEPDTLSWK 484
GK L M +K G++ N +I +Y + G +++AL + S+ D +SW
Sbjct: 320 HQIFGKS-LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWN 377
Query: 485 TLLGG 489
+++ G
Sbjct: 378 SIITG 382
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 277/552 (50%), Gaps = 19/552 (3%)
Query: 9 DPRSYKHLF--KMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAER 65
+P ++ F K C L + ++ H L + + F+ + M+ C S A +
Sbjct: 49 EPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAK 108
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VF+ M +RD +W ++S + + GH A LF M I P S TL+ S + +
Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKS 168
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT--TKNAVACTGLM 183
L+L + +H+ IR+G V++ T + Y KCG LD A++ + + V+ +
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
Y+ DA L+ M++E K D F + +C + + GR IHS+++ LG +
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQA---FESIREPNDFSWSAIITGYCQSGRFDKALETF 300
++ + YSK E C A F+ + SW+ +I+GY + G D+AL F
Sbjct: 289 QDIEAINTFISMYSKS---EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA----IKKGLVQYLSGESAMITM 356
+ G + ++ C L G + A A K+ V + A+I M
Sbjct: 346 HAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICN---ALIDM 402
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTF 415
YSKCG + A F + + WT +I YA +G EA+KLF KM+ +PN +TF
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF 462
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP 475
+ +L AC+HSG +++G ++ M Y + P +DHY+CM+ + R G L+EALE+IR+M
Sbjct: 463 LAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMS 522
Query: 476 FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQ 535
+PD W LL C HRN++ A AA +F+L+P +A YV M N++A AG WD A+
Sbjct: 523 AKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFAR 582
Query: 536 YRKMMAERNLRK 547
R +M +RN++K
Sbjct: 583 IRSIMKQRNIKK 594
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 38/344 (11%)
Query: 193 TDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPL 252
++LLLF +M + G + + F F V KACA L D+ +H++ +K S+V VGT
Sbjct: 34 VESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
VD + KC + A + FE + E + +W+A+++G+CQSG DKA F+ +R + +S
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
+ Q+ S L +HA I+ G+ ++ + I+ Y KCG LD A F
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 373 IEKPD--TIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVK 429
I++ D ++W ++ AY+ G++ +A L+ MLR +P+ TFI L +C + +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA---------------------------- 461
+G+ + S ++ G D I+ N I +YS++
Sbjct: 274 QGR-LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGY 332
Query: 462 ---GLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETA 499
G + EAL + +M +PD ++ +L+ GC +LET
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 199/418 (47%), Gaps = 8/418 (1%)
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
+W I + ++ LF M G +P++ F + + A + + + +H+ L
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 137 IRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD-A 195
I+ F +DV + T +M++KC +D A +M ++A ++ G+ Q+ HTD A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS-GHTDKA 137
Query: 196 LLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDF 255
LF +M + D ++++ + K + +H+ ++LG++ +V+V +
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 256 YSKCGRFEAACQAFESIREPND--FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
Y KCG ++A FE+I + SW+++ Y G A + + + +
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI 373
+ N+ +C L G +H+ AI G Q + + I+MYSK A F +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 374 EKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
++WT +I YA G EA+ LFH M++SG +P+ VT + L++ C G ++ GK
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 433 QFLDSMSVKYGVD-PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
++D+ + YG + N +I +YS+ G + EA ++ + P E ++W T++ G
Sbjct: 378 -WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAG 433
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 276/542 (50%), Gaps = 15/542 (2%)
Query: 22 MLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATI 81
M L GK H R N FI N ++ MY +++ + RDL +W T+
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGF 141
+S+ + ++ A+ M+ G++P ++L + + L GK+LH+ ++ G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 142 TADVS-IETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA 200
+ S + + L +MY C + + M + ++ GY+Q +ALLLF
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 201 KMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKC 259
M + G+ + + V+ AC + IH + VK GL+ + V L+D YS+
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL------ETFKNIRSKG-----V 308
G+ + A + F + + + +W+ +ITGY S + AL + + SKG +
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
NS I +C+A+S L G ++HA AIK L ++ SA++ MY+KCG L + +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 369 AFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
F I + + I W II AY HG EA+ L M+ GV+PN VTFI + ACSHSG+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL-SWKTL 486
V EG + M YGV+P+ DHY C++ + RAG ++EA +++ MP + + +W +L
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 487 LGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
LG H NLE IAA + L+P ++ YV + N+++ AG WD+A + R+ M E+ +R
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 547 KE 548
KE
Sbjct: 754 KE 755
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 255/520 (49%), Gaps = 24/520 (4%)
Query: 1 MDEACISIDPRSY--KHLFKMCGMLGALSDGKLFHNRLQRMANG--NKFIDNCILQMYCD 56
+D + I P +Y L K L + GK H + + G + + N ++ +Y
Sbjct: 86 VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRK 145
Query: 57 CKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTL 116
C F A +VFD + +R+ SW ++IS+ A+ F MLD ++PSS ++
Sbjct: 146 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 205
Query: 117 LGSFAD---PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
+ + ++ P L +GKQ+H+ +R G + I TL MY K G L ++V
Sbjct: 206 VTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
++ V ++ Q + +AL +M+ EGV+ DEF S VL AC+ L+ + TG+++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 234 HSYSVKLG-LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
H+Y++K G L+ VG+ LVD Y C + + + F+ + + W+A+I GY Q+
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 293 FDKALETFKNI-RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
+AL F + S G++ NS + AC +H +K+GL + ++
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKML------ 404
++ MYS+ GK+D A + F +E D + W +I Y + E A+ L HKM
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 405 -----RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
R ++PN++T + +L +C+ + +GK+ + + ++K + + + ++ +Y+
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYA 563
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA 499
+ G LQ + ++ +P + + ++W ++ H N + A
Sbjct: 564 KCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA 602
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 216/453 (47%), Gaps = 23/453 (5%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG----NKFIDNCILQMYCDCKSFT 61
+ D + + C L L GK H + NG N F+ + ++ MYC+CK
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELH--AYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD-LGIKPSSSIFCTLLGSF 120
+ RVFD M DR + W +I+ Y++ H A+ LF M + G+ +S+ ++ +
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
A + +H +++ G D ++ TL +MY + G +D A KM ++ V
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 181 GLMVGYTQALRHTDALLLFAKM------IKEG-----VKLDEFVFSIVLKACAALKDINT 229
++ GY + H DALLL KM + +G +K + +L +CAAL +
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
G++IH+Y++K L ++V+VG+ LVD Y+KCG + + + F+ I + N +W+ II Y
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV-HADAIKKGLVQYLS 348
G +A++ + + +GV N + ++F ACS + G ++ + G+
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 655
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKP--DTIAWTAIICAYAYHGKSEAVKLFHKMLRS 406
+ ++ + + G++ AYQ + + AW++++ A H E ++ + L
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 715
Query: 407 GVRPNAVT-FIGLLNACSHSGLVKEGKQFLDSM 438
+ PN + ++ L N S +GL + + +M
Sbjct: 716 -LEPNVASHYVLLANIYSSAGLWDKATEVRRNM 747
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 207/420 (49%), Gaps = 12/420 (2%)
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
W ++ + + A+ + M+ LGIKP + F LL + AD +ELGKQ+H+ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 138 RIGFTAD-VSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDAL 196
+ G+ D V++ TL N+Y KCG ++++ +N V+ L+ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAAL---KDINTGRQIHSYSVKLGLESEVSVGTPLV 253
F M+ E V+ F V+ AC+ L + + G+Q+H+Y ++ G + + T LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LV 243
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
Y K G+ ++ S + +W+ +++ CQ+ + +ALE + + +GV + F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLS-GESAMITMYSKCGKLDYAYQAFLT 372
+++ ACS + L G ++HA A+K G + S SA++ MY C ++ + F
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 373 IEKPDTIAWTAIICAYAY--HGKSEAVKLFHKMLRS-GVRPNAVTFIGLLNACSHSGLVK 429
+ W A+I Y+ H K EA+ LF M S G+ N+ T G++ AC SG
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDK-EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
K+ + VK G+D N ++ +YSR G + A+ + M + D ++W T++ G
Sbjct: 423 R-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/501 (31%), Positives = 259/501 (51%), Gaps = 23/501 (4%)
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL--------GIKPSSS 111
F A R+ ++ + W ++I GH G I L R+ L G+ PS
Sbjct: 52 FRYARRLLCQLQTLSIQLWDSLI------GHFSGGITLNRRLSFLAYRHMRRNGVIPSRH 105
Query: 112 IFCTLLGS---FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
F LL + D + Q H+ +++ G +D + +L + Y G D A
Sbjct: 106 TFPPLLKAVFKLRDSNPF----QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLF 161
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
+ K+ V T ++ G+ + ++A++ F +M K GV +E VLKA ++D+
Sbjct: 162 DGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVR 221
Query: 229 TGRQIHSYSVKLG-LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
GR +H ++ G ++ +V +G+ LVD Y KC ++ A + F+ + N +W+A+I GY
Sbjct: 222 FGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGY 281
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
QS FDK + F+ + V N +++ AC+ + L G +VH IK +
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRS 406
+ + +I +Y KCG L+ A F + + + WTA+I +A HG + +A LF+ ML S
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS 401
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
V PN VTF+ +L+AC+H GLV+EG++ SM ++ ++P DHY CM+ ++ R GLL+E
Sbjct: 402 HVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEE 461
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHAL 526
A +I MP EP + W L G C H++ E AA ++ L P S Y + NL++
Sbjct: 462 AKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSE 521
Query: 527 AGNWDEAAQYRKMMAERNLRK 547
+ NWDE A+ RK M ++ + K
Sbjct: 522 SQNWDEVARVRKQMKDQQVVK 542
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 174/382 (45%), Gaps = 32/382 (8%)
Query: 32 FHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGH 90
FH + + + + F+ N ++ Y F A R+FD D+D+ +W +I + G
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 91 MIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG-FTADVSIET 149
A+ F M G+ + ++L + + G+ +H + G DV I +
Sbjct: 185 ASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGS 244
Query: 150 TLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
+L +MY KC D A+ ++M ++N V T L+ GY Q+ +L+F +M+K V
Sbjct: 245 SLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF 269
+E S VL ACA + ++ GR++H Y +K +E + GT L+D Y KCG E A F
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
E + E N ++W+A+I G+ G A + F + S V N + + AC+
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA------ 418
Query: 330 YGAQVHADAIKKGLVQYLSGE------------SAMITMYSKCGKLDYAYQAFLTIEK-- 375
H +++G +LS + + M+ ++ + G L+ +A IE+
Sbjct: 419 -----HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLE---EAKALIERMP 470
Query: 376 --PDTIAWTAIICAYAYHGKSE 395
P + W A+ + H E
Sbjct: 471 MEPTNVVWGALFGSCLLHKDYE 492
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/625 (28%), Positives = 297/625 (47%), Gaps = 95/625 (15%)
Query: 14 KHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR 73
HL +M G + + N M + N F N +++ Y + + R FD M +R
Sbjct: 66 NHLLQMYSRSGKMG---IARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER 122
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLD----------------------------LG 105
D +SW ++S +A+ G + A RLF+ M + L
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN 182
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+ T+L + A+ AL+ GKQ+H+Q++ G D + ++L N+Y KCG L A
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 166 VATNKMTTKNAVACTGLMVGYTQALR-------------------------------HTD 194
++ + + + L+ GY R +
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVD 254
AL+LF +M E + D + V+ AC L + TG+Q+H ++ K GL ++ V + L+D
Sbjct: 303 ALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 255 FYSKCG-------------------------------RFEAACQAFESIREPNDFSWSAI 283
YSKCG R + A + FE I + SW+++
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 284 ITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL 343
G+ Q+G + LE F + + + +++ AC++IS L G QV A A GL
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHK 402
S++I +Y KCG +++ + F T+ K D + W ++I YA +G+ EA+ LF K
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 403 MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
M +G+RP +TF+ +L AC++ GLV+EG++ +SM V +G P +H++CM+ + +RAG
Sbjct: 542 MSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAG 601
Query: 463 LLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFN 522
++EA+ ++ MPF+ D W ++L GC ++ AA KI L+P +S YV +
Sbjct: 602 YVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSA 661
Query: 523 LHALAGNWDEAAQYRKMMAERNLRK 547
+ A +G+W+ +A RK+M E N+ K
Sbjct: 662 IFATSGDWESSALVRKLMRENNVTK 686
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 211/506 (41%), Gaps = 106/506 (20%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ N +LQMY A +FDEM DR+ FSW T+I Y G ++R F M +
Sbjct: 64 VANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE-- 121
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
R G++ +V + + K G L A
Sbjct: 122 --------------------------------RDGYSWNVVVSG-----FAKAGELSVAR 144
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
N M K+ V L+ GY +AL LF ++ D + VLKACA L+
Sbjct: 145 RLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELE 201
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIIT 285
+ G+QIH+ + G+E + + + LV+ Y+KCG A E IREP+D S SA+I+
Sbjct: 202 ALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALIS 261
Query: 286 GYCQSGRFDKALETFKNIRSKGVIL-----NSFVYTN----------------------- 317
GY GR +++ F ++ VIL + ++ N
Sbjct: 262 GYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTL 321
Query: 318 --IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSK---------------- 359
+ AC + L G Q+H A K GL+ + S ++ MYSK
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 360 ---------------CGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKM 403
CG++D A + F IE I+W ++ ++ +G + E ++ FH+M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
+ + + V+ +++AC+ ++ G+Q ++ G+D + +I +Y + G
Sbjct: 442 HKLDLPTDEVSLSSVISACASISSLELGEQVFARATI-VGLDSDQVVSSSLIDLYCKCGF 500
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGG 489
++ + +M + D + W +++ G
Sbjct: 501 VEHGRRVFDTM-VKSDEVPWNSMISG 525
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 137/346 (39%), Gaps = 94/346 (27%)
Query: 217 VLKACAALKDINTGRQIHSYSVKLG-LESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
+L++C++ RQ + +K G L S V V L+ YS+ G+ A F+ + +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 276 NDFSWSAIITGYCQSGRFDKALETFK----------NIRSKG------------------ 307
N FSW+ +I GY SG +L F N+ G
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 308 ----VILNSFVY---------------------------TNIFQACSAISDLVYGAQVHA 336
V LNS ++ T + +AC+ + L G Q+HA
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG---- 392
+ G+ S+++ +Y+KCG L A I +PD + +A+I YA G
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 393 ----------------------------KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
K EA+ LF++M R+ R ++ T ++NAC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIG 330
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
G ++ GKQ + + K+G+ I + ++ +YS+ G EA ++
Sbjct: 331 LGFLETGKQ-MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/551 (30%), Positives = 271/551 (49%), Gaps = 20/551 (3%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNC---------ILQMYCDCK 58
+ P S + F + G D R R+ +G +D C I++MY
Sbjct: 115 LKPNSSTYAFAISAASGFRDD------RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFW 168
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG-IKPSSSIFCTLL 117
A +VFD M ++D W T+IS Y + + +I++F +++ + ++ +L
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV 177
+ A+ L LG Q+HS + G + + T ++Y KCG + + + V
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
A ++ GYT +L LF +++ G +L ++ L I IH Y
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYC 345
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL 297
+K S SV T L YSK E+A + F+ E + SW+A+I+GY Q+G + A+
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
F+ ++ N T I AC+ + L G VH + +A+I MY
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 358 SKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFI 416
+KCG + A + F + K + + W +I Y HG+ EA+ +F++ML SG+ P VTF+
Sbjct: 466 AKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF 476
+L ACSH+GLVKEG + +SM +YG +P++ HY CM+ + RAG LQ AL+ I +M
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 477 EPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQY 536
EP + W+TLLG C H++ A + K+F LDP + +V + N+H+ N+ +AA
Sbjct: 586 EPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATV 645
Query: 537 RKMMAERNLRK 547
R+ +R L K
Sbjct: 646 RQTAKKRKLAK 656
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 218/469 (46%), Gaps = 44/469 (9%)
Query: 115 TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK 174
T L F +++ Q H+Q+I GF D+S+ T L+ G + A +
Sbjct: 22 TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81
Query: 175 NAVACTGLMVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQI 233
+ LM G++ +L +FA + K +K + ++ + A + +D GR I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 234 HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRF 293
H +V G +SE+ +G+ +V Y K R E A + F+ + E + W+ +I+GY ++ +
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 294 DKALETFKNIRSKGVI-LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
++++ F+++ ++ L++ +I A + + +L G Q+H+ A K G + +
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPN 411
I++YSKCGK+ F KPD +A+ A+I Y +G++E ++ LF +++ SG R
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 412 AVTFIGLLNACSHSGLVKE------GKQFLDSMSVKYGV--------------------- 444
+ T + L+ H L+ FL SV +
Sbjct: 322 SSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASI 501
+ ++ +N MI Y++ GL ++A+ + R M F P+ ++ +L C + ++
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC-----AQLGAL 436
Query: 502 AAGKIFH----LDPLDSATYVT--MFNLHALAGNWDEAAQYRKMMAERN 544
+ GK H +S+ YV+ + ++A G+ EA + +M ++N
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+ +++ Y + F+ ++IS L AQ HA I G +S + + S G +
Sbjct: 13 TTAALISKNTYLDFFKRSTSISHL---AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIY 69
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYH-GKSEAVKLFHKMLRS-GVRPNAVTFIGLLNAC 422
YA FL++++PD + ++ ++ + ++ +F + +S ++PN+ T+ ++A
Sbjct: 70 YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA 129
Query: 423 S-----HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
S +G V G+ +D G D + + ++ +Y + +++A ++ MP E
Sbjct: 130 SGFRDDRAGRVIHGQAVVD------GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP-E 182
Query: 478 PDTLSWKTLLGG 489
DT+ W T++ G
Sbjct: 183 KDTILWNTMISG 194
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 283/558 (50%), Gaps = 14/558 (2%)
Query: 3 EACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDCKS 59
EA + +D +Y CG L G+L H + + NG F+ N ++ MY C
Sbjct: 141 EANLKLDKFTYAGALGFCGERCDLDLGELLHGLV--VVNGLSQQVFLINVLIDMYSKCGK 198
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A +FD +RD SW ++IS Y G + L ++M G+ ++ ++L +
Sbjct: 199 LDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKA 258
Query: 120 FA---DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNA 176
+ +E G +H ++G D+ + T L +MY K G L A + M +KN
Sbjct: 259 CCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV 318
Query: 177 VACTGLMVGYTQALRHTD-----ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
V ++ G+ Q TD A LF M + G++ FS+VLKAC+A K + GR
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSG 291
QIH+ K +S+ +G+ L++ Y+ G E Q F S + + SW+++I + Q+
Sbjct: 379 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE 438
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
+ + A + F+ + S + + + + AC+ + L G Q+ AIK G+ + S ++
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRP 410
+ I+MY+K G + A Q F+ ++ PD ++A+I + A HG + EA+ +F M G++P
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Query: 411 NAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
N F+G+L AC H GLV +G ++ M Y ++P H+ C++ + R G L +A +
Sbjct: 559 NQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Query: 471 IRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNW 530
I S F+ ++W+ LL C +++ A ++ L+P S +YV + N++ +G
Sbjct: 619 ILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVN 678
Query: 531 DEAAQYRKMMAERNLRKE 548
A + R++M +R ++KE
Sbjct: 679 SSAEEVRELMRDRGVKKE 696
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 241/497 (48%), Gaps = 12/497 (2%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQ-MYCDCKSFTAAER 65
++D YK LF+ G++ GKL H + + + L MYC C+ A +
Sbjct: 44 ALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
+FD M +R++ S+ ++IS Y + G A+ LF + +K + LG +
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
L+LG+ LH ++ G + V + L +MY KCG LD A ++ ++ V+ L+ G
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKD---INTGRQIHSYSVKLGL 242
Y + + L L AKM ++G+ L + VLKAC + I G IH Y+ KLG+
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRF-----DKAL 297
E ++ V T L+D Y+K G + A + F + N +++A+I+G+ Q +A
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
+ F +++ +G+ + ++ + +ACSA L YG Q+HA K SA+I +Y
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
Query: 358 SKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFI 416
+ G + Q F + K D +WT++I + + + E A LF ++ S +RP T
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVS 463
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF 476
+++AC+ + G+Q + ++K G+D I +Y+++G + A ++ +
Sbjct: 464 LMMSACADFAALSSGEQ-IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ- 521
Query: 477 EPDTLSWKTLLGGCWSH 493
PD ++ ++ H
Sbjct: 522 NPDVATYSAMISSLAQH 538
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 193/407 (47%), Gaps = 13/407 (3%)
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L + A ++ LGK H +I+ + + L NMY KC L A ++M +N
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
++ L+ GYTQ + A+ LF + + +KLD+F ++ L C D++ G +H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
V GL +V + L+D YSKCG+ + A F+ E + SW+++I+GY + G ++
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISD---LVYGAQVHADAIKKGLVQYLSGESA 352
L + G+ L ++ ++ +AC + + G +H K G+ + +A
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY------HGKSEAVKLFHKMLRS 406
++ MY+K G L A + F + + + + A+I + SEA KLF M R
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G+ P+ TF +L ACS + ++ G+Q + ++ K + +I +Y+ G ++
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQ-IHALICKNNFQSDEFIGSALIELYALMGSTED 411
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIF--HLDP 511
++ S + D SW +++ + LE+A ++F H+ P
Sbjct: 412 GMQCFASTS-KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP 457
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA 268
LD + I+ + A + G+ H + +K L + + L++ Y KC A Q
Sbjct: 45 LDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQL 104
Query: 269 FESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDL 328
F+ + E N S++++I+GY Q G +++A+E F R + L+ F Y C DL
Sbjct: 105 FDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDL 164
Query: 329 VYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAY 388
G +H + GL Q + + +I MYSKCGKLD A F ++ D ++W ++I Y
Sbjct: 165 DLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGY 224
Query: 389 AYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS---HSGLVKEGKQFLDSMSVKYGV 444
G + E + L KM R G+ +L AC + G +++G + + K G+
Sbjct: 225 VRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGM 283
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNL-ETASIAA 503
+ I ++ +Y++ G L+EA+++ MP + +++ ++ G + + AS A
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 504 GKIF 507
K+F
Sbjct: 343 FKLF 346
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 4/231 (1%)
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
+ K L+S Y +FQ + +V G H IK L L + ++ MY KC +L
Sbjct: 39 QPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCREL 98
Query: 364 DYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
+A Q F + + + I++ ++I Y G +A++LF + + ++ + T+ G L C
Sbjct: 99 GFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
+ G + L + V G+ + N +I +YS+ G L +A+ + E D +S
Sbjct: 159 GERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVS 216
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA 533
W +L+ G E K+ H D L+ TY L A N +E
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEG 266
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 262/504 (51%), Gaps = 20/504 (3%)
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
+ + A VF+ + ++ W ++I Y+ + A+ + ML G P F +L
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+ + ++ G +H +++ GF ++ + T L +MY+ CG ++ + N VA
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
L+ G+ R +DA+ F +M GVK +E + +L AC KDI TG+ H +
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 239 KLGLES--------EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQS 290
LG + V + T L+D Y+KCG A F+ + E SW++IITGY Q+
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 291 GRFDKALETFKNIRSKGVILN-----SFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
G ++AL F ++ G+ + S + ++ Q CS + G +HA K G V+
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL-----GQSIHAYVSKTGFVK 350
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKML 404
+ A++ MY+K G + A +AF +EK DTIAWT +I A HG +EA+ +F +M
Sbjct: 351 DAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQ 410
Query: 405 RSG-VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
G P+ +T++G+L ACSH GLV+EG+++ M +G++PT++HY CM+ + SRAG
Sbjct: 411 EKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGR 470
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
+EA ++++MP +P+ W LL GC H NLE + + L S YV + N+
Sbjct: 471 FEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNI 530
Query: 524 HALAGNWDEAAQYRKMMAERNLRK 547
+A AG W + R+ M + + K
Sbjct: 531 YAKAGRWADVKLIRESMKSKRVDK 554
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 201/456 (44%), Gaps = 13/456 (2%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAER 65
S D ++ ++ K C L + G H + + N ++ C+L MY C R
Sbjct: 104 SPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLR 163
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VF+++ ++ +W ++IS + AI F M G+K + +I LL +
Sbjct: 164 VFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKD 223
Query: 126 LELGKQLHSQLIRIGFTA--------DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV 177
+ GK H L +GF +V + T+L +MY KCG L A + M + V
Sbjct: 224 IVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLV 283
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
+ ++ GY+Q +AL +F M+ G+ D+ F V++A G+ IH+Y
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL 297
K G + ++ LV+ Y+K G E+A +AFE + + + +W+ +I G G ++AL
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEAL 403
Query: 298 ETFKNIRSKG-VILNSFVYTNIFQACSAISDLVYGAQVHADAIK-KGLVQYLSGESAMIT 355
F+ ++ KG + Y + ACS I + G + A+ GL + M+
Sbjct: 404 SIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVD 463
Query: 356 MYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVT 414
+ S+ G+ + A + T+ KP+ W A++ H E M+ +
Sbjct: 464 ILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGI 523
Query: 415 FIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
++ L N + +G + K +SM K VD + H
Sbjct: 524 YVLLSNIYAKAGRWADVKLIRESMKSKR-VDKVLGH 558
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 20/357 (5%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMA---------NGNKFIDNCILQMYCDCKSFTAAERV 66
L CG + GK FH LQ + N + ++ MY C A +
Sbjct: 214 LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
FD M +R L SW +II+ Y++ G A+ +F MLDLGI P F +++ +
Sbjct: 274 FDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS 333
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
+LG+ +H+ + + GF D +I L NMY K G + A+ A + K+ +A T +++G
Sbjct: 334 QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGL 393
Query: 187 TQALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL-GLES 244
+AL +F +M ++G D + VL AC+ + + G++ + L GLE
Sbjct: 394 ASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEP 453
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKALETFKNI 303
V +VD S+ GRFE A + +++ +PN W A++ G C + + +++
Sbjct: 454 TVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG-CDIHENLELTDRIRSM 512
Query: 304 RSKGVILNSFVY---TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
++ L S +Y +NI+ +D+ ++ +++K V + G S++ TM+
Sbjct: 513 VAEPEELGSGIYVLLSNIYAKAGRWADV----KLIRESMKSKRVDKVLGHSSVETMF 565
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK---LDYAYQAFL 371
Y I LV Q+H IK +++ + S +I + C + L YA F
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 372 TIEKPDTIAWTAIICAYAYHGKSEAVKLFHK-MLRSGVRPNAVTFIGLLNACSHSGLVKE 430
+I+ P W ++I Y+ + +F++ MLR G P+ TF +L ACS ++
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
G + VK G + + C++ +Y G + L + +P + + ++W +L+ G
Sbjct: 126 G-SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLISG 182
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/503 (31%), Positives = 260/503 (51%), Gaps = 4/503 (0%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L +Y C A ++FDEM RD+ S + + L RML G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 108 PSSSIFCTLLGSFAD-PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEV 166
+++ T++ S D P + K +H+ I G+ ++S+ L Y KCG
Sbjct: 154 DHATL--TIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 167 ATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKD 226
+ M+ +N + T ++ G + H D L LF+ M + V + + L AC+ +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 227 INTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITG 286
I G+QIH+ K G+ESE+ + + L+D YSKCG E A FES E ++ S + I+ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
Q+G ++A++ F + GV +++ V + + + L G Q+H+ IK+
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLR 405
+ +I MYSKCG L + F + K + ++W ++I A+A HG A+KL+ +M
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
V+P VTF+ LL+ACSH GL+ +G++ L+ M +G++P +HY C+I + RAGLL+
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 466 EALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHA 525
EA I S+P +PD W+ LLG C H + E AA ++F P S+ ++ + N+++
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYS 571
Query: 526 LAGNWDEAAQYRKMMAERNLRKE 548
G W E A+ K M + KE
Sbjct: 572 SRGKWKERAKTIKRMKAMGVTKE 594
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 185/404 (45%), Gaps = 7/404 (1%)
Query: 37 QRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIR 96
+ ++ GNK I + Y C + VFD M R++ + +IS E +R
Sbjct: 188 KEISVGNKLITS-----YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLR 242
Query: 97 LFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYI 156
LFS M + P+S + + L + + + G+Q+H+ L + G +++ IE+ L +MY
Sbjct: 243 LFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYS 302
Query: 157 KCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSI 216
KCG ++ A T + V+ T ++VG Q +A+ F +M++ GV++D V S
Sbjct: 303 KCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSA 362
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
VL + G+Q+HS +K V L++ YSKCG + F + + N
Sbjct: 363 VLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN 422
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
SW+++I + + G AL+ ++ + + V + ++ ACS + + G ++
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLN 482
Query: 337 DAIK-KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKS 394
+ + G+ + +I M + G L A ++ KPD W A++ A ++HG +
Sbjct: 483 EMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDT 542
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
E + + L ++ I + N S G KE + + M
Sbjct: 543 EVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRM 586
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKS 59
M +A + ID + + + +L GK H+ ++R +GN F++N ++ MY C
Sbjct: 348 MLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGD 407
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
T ++ VF M R+ SW ++I+A+A GH + A++L+ M L +KP+ F +LL +
Sbjct: 408 LTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA 467
Query: 120 FADPSALELGKQLHSQLIRI-GFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK 174
+ ++ G++L +++ + G T + +M + G L A+ + + K
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLK 523
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
V L+ Y+KCG+ A + F+ + + S + + G+ ++ + K + G
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+ T + C + +HA AI G + +S + +IT Y KCG
Sbjct: 152 G-FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
F + + I TA+I + E ++LF M R V PN+VT++ L ACS S
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
+ EG+Q + ++ KYG++ + + ++ +YS+ G +++A + S E D +S +
Sbjct: 271 RIVEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT-EVDEVSMTVI 328
Query: 487 LGGCWSHRNLETA 499
L G + + E A
Sbjct: 329 LVGLAQNGSEEEA 341
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 277/572 (48%), Gaps = 76/572 (13%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
L ++C ++G+ H + R+ N + N ++ MY + +VF+ M DR+
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 75 LFSWATIISAYAEEGHM---IG--------------------------------AIRLFS 99
L SW +I+S+Y + G++ IG AI +
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 100 RMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG 159
RM G+KPS+S +LL + A+P L+LGK +H ++R DV +ETTL +MYIK G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 160 WLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
+L A + + M KN VA L+ G + A DA L +M KEG+K D ++
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN---- 330
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----P 275
L Y+ G+ E A ++E P
Sbjct: 331 -------------------------------SLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N SW+AI +G ++G F AL+ F ++ +GV N+ + + + +S L G +VH
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-S 394
++K L+ +A++ MY K G L A + F I+ +W ++ YA G+
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE 479
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCM 454
E + F ML +G+ P+A+TF +L+ C +SGLV+EG ++ D M +YG+ PTI+H +CM
Sbjct: 480 EGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539
Query: 455 IGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDS 514
+ + R+G L EA + I++M +PD W L C HR+LE A IA ++ L+P +S
Sbjct: 540 VDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNS 599
Query: 515 ATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
A Y+ M NL++ W++ + R +M +R
Sbjct: 600 ANYMMMINLYSNLNRWEDVERIRNLMRNNRVR 631
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 182/407 (44%), Gaps = 43/407 (10%)
Query: 128 LGKQLHSQLIRIGF-TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
LG +H LI+ G +D + + Y +C L A ++M ++ +A +++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
++ A+ LF +M G K + +L+ C+ + GRQIH Y ++LGLES V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIRE-------------------------------- 274
S+ L+ YS+ G+ E + + F S+++
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 275 ---PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
P+ +W+++++GY G A+ K ++ G+ ++ +++ QA + L G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
+H ++ L + E+ +I MY K G L YA F ++ + +AW +++ +Y
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 392 G-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
+A L +M + G++P+A+T+ L + + G ++ + M K GV P +
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVS 363
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLG--GCWS 492
+ + S+ G + AL++ M E P+ + TLL GC S
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 256/474 (54%), Gaps = 11/474 (2%)
Query: 81 IISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG 140
+I + +EG + AIR+ S+ PS + L+ S+L ++H ++ G
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 141 FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA 200
D + T L MY G +D A +K + L T A + L L+
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 201 KMIKEGVKLDEFVFSIVLKACAA----LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
KM + GV+ D F ++ VLKAC A + + G++IH++ + G S V + T LVD Y
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI--RSKGVILNSFV 314
++ G + A F + N SWSA+I Y ++G+ +AL TF+ + +K NS
Sbjct: 228 ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVT 287
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE 374
++ QAC++++ L G +H +++GL L SA++TMY +CGKL+ + F +
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 375 KPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ 433
D ++W ++I +Y HG +A+++F +ML +G P VTF+ +L ACSH GLV+EGK+
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 434 FLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
++M +G+ P I+HY CM+ + RA L EA +M++ M EP W +LLG C H
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467
Query: 494 RNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
N+E A A+ ++F L+P ++ YV + +++A A WDE + +K++ R L+K
Sbjct: 468 GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 209/442 (47%), Gaps = 12/442 (2%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAAER 65
S ++Y+ L CG +LSD H L ++ + F+ ++ MY D S A +
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL----GSFA 121
VFD+ R ++ W + A GH + L+ +M +G++ + +L S
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+ L GK++H+ L R G+++ V I TTL +MY + G +D A M +N V+ +
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 182 LMVGYTQALRHTDALLLFAKMIKE--GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
++ Y + + +AL F +M++E + VL+ACA+L + G+ IH Y ++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 240 LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET 299
GL+S + V + LV Y +CG+ E + F+ + + + SW+++I+ Y G KA++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 300 FKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIK-KGLVQYLSGESAMITMYS 358
F+ + + G + ++ ACS + G ++ + G+ + + M+ +
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 359 KCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIG 417
+ +LD A + + +P W +++ + HG E + + L + NA ++
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 418 LLNACSHSGL---VKEGKQFLD 436
L + + + + VK K+ L+
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLE 515
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 10/298 (3%)
Query: 1 MDEACISIDPRSYKHLFKMC----GMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYC 55
M+ + D +Y ++ K C + L GK H L R + + +I ++ MY
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA 228
Query: 56 DCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML--DLGIKPSSSIF 113
A VF M R++ SW+ +I+ YA+ G A+R F M+ P+S
Sbjct: 229 RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
Query: 114 CTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
++L + A +ALE GK +H ++R G + + + + L MY +CG L+ + ++M
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
++ V+ L+ Y A+ +F +M+ G F VL AC+ + G+++
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 234 HSYSVK-LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQ 289
+ G++ ++ +VD + R + A + + +R EP W +++ G C+
Sbjct: 409 FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSCR 465
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 273/531 (51%), Gaps = 6/531 (1%)
Query: 20 CGMLGALSDGKLFHNRLQR-MANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
C LG L + H ++ R M + ++ + N +L MY C ++ER+F+++ ++ SW
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
+IS+Y A+R FS M+ GI+P+ ++L S + GK +H +R
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 139 IGFTADV-SIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALL 197
+ S+ L +Y +CG L E ++ +N VA L+ Y AL
Sbjct: 332 RELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALG 391
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
LF +M+ + +K D F + + AC + G+QIH + ++ + E V L+D YS
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYS 450
Query: 258 KCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
K G ++A F I+ + +W++++ G+ Q+G +A+ F + + +N +
Sbjct: 451 KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLA 510
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
+ QACS+I L G VH I GL + L ++A+I MY+KCG L+ A F +
Sbjct: 511 VIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRS 569
Query: 378 TIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
++W+++I AY HG+ A+ F++M+ SG +PN V F+ +L+AC HSG V+EGK + +
Sbjct: 570 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN 629
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNL 496
M +GV P +H+ C I + SR+G L+EA I+ MPF D W +L+ GC H+ +
Sbjct: 630 LMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKM 688
Query: 497 ETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+ + + D+ Y + N++A G W+E + R M NL+K
Sbjct: 689 DIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKK 739
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 233/452 (51%), Gaps = 6/452 (1%)
Query: 26 LSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISA 84
LS G H R+ + + + I+ +L MY + + AE+VFD M RDL +W+T++S+
Sbjct: 117 LSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 85 YAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD 144
E G ++ A+R+F M+D G++P + +++ A+ L + + +H Q+ R F D
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 145 VSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK 204
++ +L MY KCG L +E K+ KNAV+ T ++ Y + AL F++MIK
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
Query: 205 EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV-SVGTPLVDFYSKCGRFE 263
G++ + VL +C + I G+ +H ++V+ L+ S+ LV+ Y++CG+
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 356
Query: 264 AACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS 323
+ + N +W+++I+ Y G +AL F+ + ++ + ++F + AC
Sbjct: 357 DCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE 416
Query: 324 AISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
+ G Q+H I+ + ++++I MYSK G +D A F I+ + W +
Sbjct: 417 NAGLVPLGKQIHGHVIRTDVSDEFV-QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS 475
Query: 384 IICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY 442
++C ++ +G S EA+ LF M S + N VTF+ ++ ACS G +++GK + +
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG 535
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
D D +I +Y++ G L A + R+M
Sbjct: 536 LKDLFTD--TALIDMYAKCGDLNAAETVFRAM 565
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 214/465 (46%), Gaps = 41/465 (8%)
Query: 120 FADPSALELGKQLHSQLIRIG-FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
F S+L L QLH+ L+ G D T L Y G D + + ++
Sbjct: 8 FRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFM 67
Query: 179 CTGLMVGYTQALRHTDALL-LFAKMIKEGVKLDEFVFSIVLKACAALKD-INTGRQIHSY 236
G+++ DA + L+ +++ E ++ +FVF VL+ACA ++ ++ G ++H
Sbjct: 68 -YGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKA 296
+K G++ + + T L+ Y + G A + F+ + + +WS +++ ++G KA
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 297 LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITM 356
L FK + GV ++ ++ + C+ + L VH +K + ++++TM
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTF 415
YSKCG L + + F I K + ++WTA+I +Y SE A++ F +M++SG+ PN VT
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDP----------------------------- 446
+L++C GL++EGK + +V+ +DP
Sbjct: 307 YSVLSSCGLIGLIREGKS-VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV 365
Query: 447 ---TIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETAS 500
I +N +I +Y+ G++ +AL + R M +PD + + + C + +
Sbjct: 366 SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK 425
Query: 501 IAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
G + D D ++ ++++ +G+ D A+ + R++
Sbjct: 426 QIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSF 60
M + + ++ ++ + + C +G+L GK H++L + F D ++ MY C
Sbjct: 496 MYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDL 555
Query: 61 TAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSF 120
AAE VF M R + SW+++I+AY G + AI F++M++ G KP+ +F +L +
Sbjct: 556 NAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 615
Query: 121 ADPSALELGK 130
++E GK
Sbjct: 616 GHSGSVEEGK 625
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 260/532 (48%), Gaps = 9/532 (1%)
Query: 15 HLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR 73
+L CG G +S G+ H + + + N ++ Y C +AE +F EM D+
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK 215
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
SW T+I AY++ G AI +F M + ++ S LL + + LH
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLH 269
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
+++ G D+S+ T+L Y +CG L AE + V T ++ Y +
Sbjct: 270 CLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
A++ F+K + +K+D +L C I+ G +H Y++K GL ++ V L+
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI 389
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR-SKGVILNS 312
YSK E FE ++E SW+++I+G QSGR A E F + + G++ ++
Sbjct: 390 TMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA 449
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
++ CS + L G ++H ++ +A+I MY+KCG A F +
Sbjct: 450 ITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS 509
Query: 373 IEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEG 431
I+ P T W ++I Y+ G + A+ + +M G++P+ +TF+G+L+AC+H G V EG
Sbjct: 510 IKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEG 569
Query: 432 KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCW 491
K +M ++G+ PT+ HY M+G+ RA L EAL +I M +PD+ W LL C
Sbjct: 570 KICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACI 629
Query: 492 SHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
HR LE A K+F LD + YV M NL+A WD+ + R MM +
Sbjct: 630 IHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDN 681
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 214/481 (44%), Gaps = 41/481 (8%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
++ +L +Y T+A+ +FDEM +RD W +I Y+ G+ A +LF ML
Sbjct: 86 YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G PS++ LL + G+ +H + G D ++ L + Y KC L A
Sbjct: 146 GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
EV +M K+ V+ ++ Y+Q+ +A+ +F M ++ V++ +L A
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHV-- 263
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
+ +H VK G+ +++SV T LV YS+CG +A + + S ++ + ++I+
Sbjct: 264 ----SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIV 319
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+ Y + G D A+ F R + +++ I C S + G +H AIK GL
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHK- 402
+ +ITMYSK ++ F +++ I+W ++I G+ S A ++FH+
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 403 MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF------------------LDSMSVKYGV 444
ML G+ P+A+T LL CS + GK+ L M K G
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 445 D------------PTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWKTLLGG 489
+ P +N MI YS +GL AL +R +PD +++ +L
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 490 C 490
C
Sbjct: 560 C 560
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 201/418 (48%), Gaps = 17/418 (4%)
Query: 95 IRLFSRMLDLGIKPSS---SIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTL 151
I +F +L + P+ SIF + + L++ +Q+ + L + G V ++T+L
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQV-EQVQTHLTKSGLDRFVYVKTSL 91
Query: 152 SNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDE 211
N+Y+K G + A++ ++M ++ V L+ GY++ DA LF M+++G
Sbjct: 92 LNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSA 151
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFES 271
+L C ++ GR +H + K GLE + V L+ FYSKC +A F
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 272 IREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
+++ + SW+ +I Y QSG ++A+ FKN+ K V ++ N+ A V
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA------HVSH 265
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
+H +K G+V +S ++++ YS+CG L A + + + ++ + T+I+ YA
Sbjct: 266 EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 325
Query: 392 GKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G + AV F K + ++ +AV +G+L+ C S + G L ++K G+
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS-LHGYAIKSGLCTKTLV 384
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH 508
N +I +YS+ ++ L + + P +SW +++ GC TA ++FH
Sbjct: 385 VNGLITMYSKFDDVETVLFLFEQLQETP-LISWNSVISGCVQSGRASTAF----EVFH 437
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 278/549 (50%), Gaps = 9/549 (1%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDC-KSFTAA 63
I P+ Y L + C + + G FH + + ++ + N +L +Y
Sbjct: 57 IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 64 ERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
RVFD +D SW +++S Y + A+ +F M+ G+ + + + + ++
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL 176
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
+ LG+ H +I GF + I +TL+ +Y A ++M + + T ++
Sbjct: 177 GEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVL 236
Query: 184 VGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+++ + +AL LF M + +G+ D F VL AC L+ + G++IH + G+
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
S V V + L+D Y KCG A Q F + + N SWSA++ GYCQ+G +KA+E F+
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+ K + + + + +AC+ ++ + G ++H +++G + ESA+I +Y K G
Sbjct: 357 MEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGC 412
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
+D A + + + + I W A++ A A +G+ EAV F+ M++ G++P+ ++FI +L A
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL 481
C H+G+V EG+ + M+ YG+ P +HY+CMI + RAGL +EA ++ D
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDAS 532
Query: 482 SWKTLLGGCWSHRNL-ETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
W LLG C ++ + A A ++ L+P +YV + N++ G +A RK+M
Sbjct: 533 LWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLM 592
Query: 541 AERNLRKEV 549
R + K V
Sbjct: 593 VRRGVAKTV 601
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 212/458 (46%), Gaps = 10/458 (2%)
Query: 89 GHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIE 148
G + AIR+ + I + ++ +LL + + G Q H+ +++ G D ++
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 149 TTLSNMYIKCG-WLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGV 207
+L ++Y K G + + K+A++ T +M GY H AL +F +M+ G+
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
+EF S +KAC+ L ++ GR H + G E + + L Y A +
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 268 AFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI-RSKGVILNSFVYTNIFQACSAIS 326
F+ + EP+ W+A+++ + ++ +++AL F + R KG++ + + + AC +
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 327 DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIIC 386
L G ++H I G+ + ES+++ MY KCG + A Q F + K ++++W+A++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 387 AYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD 445
Y +G+ E A+++F +M + F +L AC+ V+ GK+ + V+ G
Sbjct: 340 GYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKE-IHGQYVRRGCF 394
Query: 446 PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH-RNLETASIAAG 504
+ + +I +Y ++G + A + M + ++W +L + R E S
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFND 453
Query: 505 KIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
+ D +++ + G DE Y +MA+
Sbjct: 454 MVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 132/296 (44%), Gaps = 41/296 (13%)
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
C+ G+ +A+ + S + +Y ++ Q C+ + ++G Q HA +K GL
Sbjct: 37 CKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR 96
Query: 348 SGESAMITMYSKCGK-LDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS--EAVKLFHKML 404
+ ++++++Y K G + + F D I+WT+++ Y GK +A+++F +M+
Sbjct: 97 NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVT-GKEHVKALEVFVEMV 155
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGK--------------QFLDS-MSVKYGV----- 444
G+ N T + ACS G V+ G+ F+ S ++ YGV
Sbjct: 156 SFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPV 215
Query: 445 ----------DPTIDHYNCMIGVYSRAGLLQEAL----EMIRSMPFEPDTLSWKTLLGGC 490
+P + + ++ +S+ L +EAL M R PD ++ T+L C
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 491 WSHRNLETASIAAGKIFHLDPLDSATYV--TMFNLHALAGNWDEAAQYRKMMAERN 544
+ R L+ GK+ + + S V ++ +++ G+ EA Q M+++N
Sbjct: 276 GNLRRLKQGKEIHGKLI-TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 275/547 (50%), Gaps = 41/547 (7%)
Query: 8 IDPRSYK--HLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
I P Y + +MC L L G+ H + + + + N +L MY CK + AE
Sbjct: 121 IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180
Query: 65 RVFDEMV-DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
+F+ M +++ +W ++++ Y++ G AI F + G + + F ++L + A
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV 240
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
SA +G Q+H +++ GF ++ +++ L +MY KC ++ A M + V+ ++
Sbjct: 241 SACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI 300
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK--DINTGRQIHSYSVKLG 241
VG + +AL +F +M + +K+D+F +L C AL ++ H VK G
Sbjct: 301 VGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTG 359
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
+ V LVD Y+K G ++A + FE + E + SW+A++TG +G +D+AL+ F
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
N+R G+ + V ++ A + ++ L +G QVH + IK G LS ++++TMY+KCG
Sbjct: 420 NMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCG 479
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
L+ A F ++E D I WT +I YA
Sbjct: 480 SLEDANVIFNSMEIRDLITWTCLIVGYA-------------------------------- 507
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL 481
+GL+++ +++ DSM YG+ P +HY CMI ++ R+G + +++ M EPD
Sbjct: 508 --KNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDAT 565
Query: 482 SWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
WK +L H N+E AA + L+P ++ YV + N+++ AG DEAA R++M
Sbjct: 566 VWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMK 625
Query: 542 ERNLRKE 548
RN+ KE
Sbjct: 626 SRNISKE 632
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 257/529 (48%), Gaps = 14/529 (2%)
Query: 22 MLGALS-DGKLFHNR--LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
+LG LS G++ R +M ++F N ++ Y + + + AE++F ++ SW
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISW 93
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
+IS Y + G + A LF M GIKP+ ++L L G+Q+H I+
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT-TKNAVACTGLMVGYTQALRHTDALL 197
GF DV++ L MY +C + AE M KN V T ++ GY+Q A+
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
F + +EG + +++ F VL ACA++ G Q+H VK G ++ + V + L+D Y+
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 258 KCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
KC E+A E + + SW+++I G + G +AL F + + + ++ F +
Sbjct: 274 KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPS 333
Query: 318 IFQACSAIS--DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK 375
I C A+S ++ + H +K G Y +A++ MY+K G +D A + F + +
Sbjct: 334 ILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 376 PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
D I+WTA++ ++G EA+KLF M G+ P+ + +L+A + L++ G+Q
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQ- 451
Query: 435 LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR 494
+ +K G ++ N ++ +Y++ G L++A + SM D ++W L+ G +
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNG 510
Query: 495 NLETASI---AAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
LE A + ++ + P Y M +L +G++ + Q M
Sbjct: 511 LLEDAQRYFDSMRTVYGITP-GPEHYACMIDLFGRSGDFVKVEQLLHQM 558
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/562 (29%), Positives = 276/562 (49%), Gaps = 26/562 (4%)
Query: 6 ISIDPRSYKH--------LFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNC------IL 51
I +P+ Y+H + C G+ H + R F+D+ ++
Sbjct: 48 IEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKG----FLDDSPRAGTSLV 103
Query: 52 QMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSS 111
MY C A VF +RD+F + +IS + G + A+ + M GI P
Sbjct: 104 NMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKY 162
Query: 112 IFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM 171
F +LL +D L K++H ++GF +D + + L Y K ++ A+ +++
Sbjct: 163 TFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDEL 221
Query: 172 TTKN-AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG 230
++ +V L+ GY+Q R DALL+F+KM +EGV + + VL A DI+ G
Sbjct: 222 PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG 281
Query: 231 RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQS 290
R IH +VK G S++ V L+D Y K E A FE++ E + F+W++++ +
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 291 GRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG- 349
G D L F+ + G+ + T + C ++ L G ++H I GL+ S
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSN 401
Query: 350 ---ESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLR 405
++++ MY KCG L A F ++ D+ +W +I Y E A+ +F M R
Sbjct: 402 EFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCR 461
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
+GV+P+ +TF+GLL ACSHSG + EG+ FL M Y + PT DHY C+I + RA L+
Sbjct: 462 AGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLE 521
Query: 466 EALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHA 525
EA E+ S P + + W+++L C H N + A +A ++ L+P YV M N++
Sbjct: 522 EAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYV 581
Query: 526 LAGNWDEAAQYRKMMAERNLRK 547
AG ++E R M ++N++K
Sbjct: 582 EAGKYEEVLDVRDAMRQQNVKK 603
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 246/474 (51%), Gaps = 3/474 (0%)
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
W + A + +I L+ ML G P + F +L S A S G+QLH +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 138 RIGFTADVSIETTLSNMYIKCGWLDGAE--VATNKMTTKNAVACTGLMVGYTQALRHTDA 195
+ G + + T L +MY KCG + A N +++ +V L+ GYT + TDA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 196 LLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDF 255
+F +M + GV +D ++ C + + GR +H VK GL+SEV+V +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY 315
Y KCG EA + F+ + +W+A+I+GY Q+G LE ++ ++S GV + F
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 316 TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK 375
++ +C+ + G +V G V + +A I+MY++CG L A F +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 376 PDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
++WTA+I Y HG E + LF M++ G+RP+ F+ +L+ACSHSGL +G +
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 435 LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR 494
+M +Y ++P +HY+C++ + RAG L EA+E I SMP EPD W LLG C H+
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 495 NLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
N++ A +A K+ +P + YV M N+++ + N + + R MM ER RK+
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK 494
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 16/424 (3%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAER 65
S D S+ + K C L G+ H + + F+ ++ MYC C A +
Sbjct: 50 SPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARK 109
Query: 66 VFDEMVDRDLFS--WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
VF+E S + +IS Y + A +F RM + G+ S L+ P
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVP 169
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
L LG+ LH Q ++ G ++V++ + MY+KCG ++ ++M K + ++
Sbjct: 170 EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
GY+Q D L L+ +M GV D F VL +CA L G ++ G
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
V V + Y++CG A F+ + + SW+A+I Y G + L F ++
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 304 RSKGVILNSFVYTNIFQAC--SAISDL---VYGAQVHADAIKKGLVQYLSGESAMITMYS 358
+G+ + V+ + AC S ++D ++ A ++ G Y S ++ +
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY----SCLVDLLG 405
Query: 359 KCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKL-FHKMLRSGVRPNAVTFI 416
+ G+LD A + ++ +PD W A++ A H + +L F K++ PN + +
Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYY 463
Query: 417 GLLN 420
L++
Sbjct: 464 VLMS 467
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 4/292 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
M E +S+D + L +C + L G+ H + + + + N + MY C S
Sbjct: 147 MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGS 206
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A R+FDEM + L +W +IS Y++ G + L+ +M G+ P ++L S
Sbjct: 207 VEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS 266
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
A A ++G ++ + GF +V + +MY +CG L A + M K+ V+
Sbjct: 267 CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSW 326
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-HSYSV 238
T ++ Y L+LF MIK G++ D VF +VL AC+ + G ++ +
Sbjct: 327 TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQ 289
+ LE + LVD + GR + A + ES+ EP+ W A++ G C+
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL-GACK 437
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/507 (30%), Positives = 261/507 (51%), Gaps = 4/507 (0%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
++N ++ MY C T A+ +F ++++ SW T++ ++ EG G + +ML G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 106 --IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
+K + S L K+LH ++ F + + Y KCG L
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 164 AEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
A+ + + +K + L+ G+ Q+ +L +M G+ D F +L AC+
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAI 283
LK + G+++H + ++ LE ++ V ++ Y CG F+++ + + SW+ +
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 284 ITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL 343
ITGY Q+G D+AL F+ + G+ L +F ACS + L G + HA A+K L
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHK 402
++I MY+K G + + + F +++ T +W A+I Y HG EA+KLF +
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 403 MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
M R+G P+ +TF+G+L AC+HSGL+ EG ++LD M +G+ P + HY C+I + RAG
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 463 LLQEALEMI-RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMF 521
L +AL ++ M E D WK+LL C H+NLE A K+F L+P YV +
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 522 NLHALAGNWDEAAQYRKMMAERNLRKE 548
NL+A G W++ + R+ M E +LRK+
Sbjct: 809 NLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 223/493 (45%), Gaps = 10/493 (2%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVF 67
D +Y + K C + + G H + + + F+ N ++ Y T A ++F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML----DLGIKPSSSIFCTLLGSFADP 123
D M +R+L SW ++I +++ G + L M+ D P + T+L A
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
+ LGK +H +++ ++ + L +MY KCG + A++ KN V+ ++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 184 VGYTQALRHTDALLLFAKMIK--EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
G++ + +M+ E VK DE + C + + +++H YS+K
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
V V Y+KCG A + F IR SW+A+I G+ QS +L+
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
++ G++ +SF ++ ACS + L G +VH I+ L + L +++++Y CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLN 420
+L F +E ++W +I Y +G A+ +F +M+ G++ ++ + +
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
ACS ++ G++ + ++K+ ++ +I +Y++ G + ++ ++ + E T
Sbjct: 606 ACSLLPSLRLGRE-AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKST 663
Query: 481 LSWKTLLGGCWSH 493
SW ++ G H
Sbjct: 664 ASWNAMIMGYGIH 676
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 214/460 (46%), Gaps = 23/460 (5%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
N+ + N + Y C S + A+RVF + + + SW +I +A+ ++ +M
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
G+ P S C+LL + + +L LGK++H +IR D+ + ++ ++YI CG L
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
+ + M K+ V+ ++ GY Q AL +F +M+ G++L V AC+
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSA 282
L + GR+ H+Y++K LE + + L+D Y+K G + + F ++E + SW+A
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK- 341
+I GY G +A++ F+ ++ G + + + AC+ S L++ + D +K
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH-SGLIHEGLRYLDQMKSS 727
Query: 342 -GLVQYLSGESAMITMYSKCGKLDYAYQ--AFLTIEKPDTIAWTAIICAYAYH-----GK 393
GL L + +I M + G+LD A + A E+ D W +++ + H G+
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYG-----VDPTI 448
A KLF L N V L V++ +Q ++ MS++ ++
Sbjct: 788 KVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 449 DHYNCMIGVYSRAGL-----LQEALEM-IRSMPFEPDTLS 482
++ ++G G L LEM I M + PDT+S
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMS 885
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 199/448 (44%), Gaps = 10/448 (2%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD-LGIKP 108
I+ MY C S + VFD + ++LF W +IS+Y+ + F M+ + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
+ ++ + A S + +G +H +++ G DV + L + Y G++ A
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE----GVKLDEFVFSIVLKACAAL 224
+ M +N V+ ++ ++ ++ LL +M++E D VL CA
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
++I G+ +H ++VKL L+ E+ + L+D YSKCG A F+ N SW+ ++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 285 TGYCQSGRFDKALETFKNIRSKG--VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
G+ G + + + + G V + N C S L ++H ++K+
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFH- 401
V +A + Y+KCG L YA + F I +W A+I +A H
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 402 KMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
+M SG+ P++ T LL+ACS ++ GK+ + ++ ++ + Y ++ +Y
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKE-VHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 462 GLLQEALEMIRSMPFEPDTLSWKTLLGG 489
G L + +M + +SW T++ G
Sbjct: 545 GELCTVQALFDAME-DKSLVSWNTVITG 571
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 149/283 (52%), Gaps = 9/283 (3%)
Query: 214 FSIVLKACAALKDINTGRQIHSY-SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
++L+A KDI GR+IH S L ++ + T ++ Y+ CG + + F+++
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETF-KNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
R N F W+A+I+ Y ++ +D+ LETF + I + ++ + F Y + +AC+ +SD+ G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
VH +K GLV+ + +A+++ Y G + A Q F + + + ++W ++I ++ +
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 392 GKS-EAVKLFHKMLRS----GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
G S E+ L +M+ P+ T + +L C+ + GK + +VK +D
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG-VHGWAVKLRLDK 325
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ N ++ +YS+ G + A +MI M + +SW T++GG
Sbjct: 326 ELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 367
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 168/387 (43%), Gaps = 19/387 (4%)
Query: 116 LLGSFADPSALELGKQLHSQLIR--IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
LL + +E+G+++H QL+ D + T + MY CG D + + + +
Sbjct: 90 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL-DEFVFSIVLKACAALKDINTGRQ 232
KN ++ Y++ + + L F +MI L D F + V+KACA + D+ G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 233 IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
+H VK GL +V VG LV FY G A Q F+ + E N SW+++I + +G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 293 FDKAL----ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLS 348
+++ E + + + + C+ ++ G VH A+K L + L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLRSG 407
+A++ MYSKCG + A F + ++W ++ ++ G + + +ML G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 408 --VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL- 464
V+ + VT + + C H + K+ L S+K N + Y++ G L
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKE-LHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 465 --QEALEMIRSMPFEPDTLSWKTLLGG 489
Q IRS SW L+GG
Sbjct: 448 YAQRVFHGIRSKTVN----SWNALIGG 470
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 284 ITGYCQSGRFDKALETFKNI------RSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
I+ +C++G DK+ T + S +L + QA D+ G ++H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH-- 107
Query: 338 AIKKGLVQYLSGESAM----------ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
Q +SG + + ITMY+ CG D + F + + W A+I +
Sbjct: 108 -------QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISS 160
Query: 388 YAYHG-KSEAVKLFHKMLR-SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD 445
Y+ + E ++ F +M+ + + P+ T+ ++ AC+ V G + + VK G+
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA-VHGLVVKTGLV 219
Query: 446 PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
+ N ++ Y G + +AL++ MP E + +SW +++
Sbjct: 220 EDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI 260
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 216/374 (57%), Gaps = 1/374 (0%)
Query: 171 MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG 230
M+ + V + GY++ + LF +++++G+ D + F +LKACA K + G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 231 RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQS 290
RQ+H S+KLGL+ V V L++ Y++C ++A F+ I EP ++A+ITGY +
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 291 GRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE 350
R ++AL F+ ++ K + N ++ +C+ + L G +H A K +Y+
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 351 SAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVR 409
+A+I M++KCG LD A F + DT AW+A+I AYA HGK+E ++ +F +M V+
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
P+ +TF+GLLNACSH+G V+EG+++ M K+G+ P+I HY M+ + SRAG L++A E
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 470 MIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGN 529
I +P P + W+ LL C SH NL+ A + +IF LD YV + NL+A
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
Query: 530 WDEAAQYRKMMAER 543
W+ RK+M +R
Sbjct: 449 WEYVDSLRKVMKDR 462
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 169/336 (50%), Gaps = 2/336 (0%)
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
S + A +F+ M + D+ + ++ Y+ + + LF +L+ GI P + F +LL
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+ A ALE G+QLH +++G +V + TL NMY +C +D A +++ V
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
++ GY + R +AL LF +M + +K +E VL +CA L ++ G+ IH Y+
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
K V V T L+D ++KCG + A FE +R + +WSA+I Y G+ +K++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYLSGESAMITMY 357
F+ +RS+ V + + + ACS + G + + + K G+V + +M+ +
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 358 SKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHG 392
S+ G L+ AY+ + P + W ++ A + H
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 3/304 (0%)
Query: 3 EACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFT 61
E I D ++ L K C + AL +G+ H ++ + N ++ ++ MY +C+
Sbjct: 122 EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVD 181
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
+A VFD +V+ + + +I+ YA A+ LF M +KP+ ++L S A
Sbjct: 182 SARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCA 241
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+L+LGK +H + F V + T L +M+ KCG LD A KM K+ A +
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSA 301
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV-KL 240
++V Y + ++L+F +M E V+ DE F +L AC+ + GR+ S V K
Sbjct: 302 MIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKF 361
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKALET 299
G+ + +VD S+ G E A + + + P W ++ D A +
Sbjct: 362 GIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKV 421
Query: 300 FKNI 303
+ I
Sbjct: 422 SERI 425
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 271 bits (693), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 261/486 (53%), Gaps = 33/486 (6%)
Query: 95 IRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNM 154
+R ++L KP +S +C L+ + ALE GK++H + GF + I L M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 155 YIKCG-------------------W------------LDGAEVATNKMTTKNAVACTGLM 183
Y KCG W L+ A ++MT K++ + T ++
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 184 VGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
GY + + +AL+L++ M + + + F SI + A AA+K I G++IH + V+ GL
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
+S+ + + L+D Y KCG + A F+ I E + SW+++I Y +S R+ + F
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+ N + + + AC+ ++ G QVH + G Y S+++ MY+KCG
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNA 421
++ A KPD ++WT++I A +G+ EA+K F +L+SG +P+ VTF+ +L+A
Sbjct: 370 IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL 481
C+H+GLV++G +F S++ K+ + T DHY C++ + +R+G ++ +I MP +P
Sbjct: 430 CTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF 489
Query: 482 SWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
W ++LGGC ++ N++ A AA ++F ++P + TYVTM N++A AG W+E + RK M
Sbjct: 490 LWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Query: 542 ERNLRK 547
E + K
Sbjct: 550 EIGVTK 555
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 213/462 (46%), Gaps = 35/462 (7%)
Query: 12 SYKHLFKMCGMLGALSDGKLFH---------------NRLQRM-------ANGNKFID-- 47
+Y +L ++C AL +GK H NRL RM + K D
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 48 --------NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFS 99
N ++ Y + A ++FDEM ++D +SW +++ Y ++ A+ L+S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 100 RMLDL-GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC 158
M + +P+ + + A + GK++H ++R G +D + ++L +MY KC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 159 GWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVL 218
G +D A +K+ K+ V+ T ++ Y ++ R + LF++++ + +E+ F+ VL
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
ACA L G+Q+H Y ++G + + LVD Y+KCG E+A + +P+
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
SW+++I G Q+G+ D+AL+ F + G + + N+ AC+ + G +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 339 IKKGLVQYLSGE-SAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEA 396
+K + + S + ++ + ++ G+ + + KP W +++ + +G +
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
+ + L N VT++ + N + +G +E + M
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 263/539 (48%), Gaps = 6/539 (1%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMANGNKFID----NCILQMYCDCKSFTAAERVFDEMV 71
L K+C L G+ H L ++ D N ++ +Y C+ A ++FD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG-IKPSSSIFCTLLGSFADPSALELGK 130
+R++ SW ++ Y G ++LF M G +P+ + + S ++ +E GK
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
Q H ++ G + + TL MY C A + + + + + GY +
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
+ L + K E + + L+ + L+D+N Q+HS V+ G +EV
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 251 PLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL 310
L++ Y KCG+ A + F+ N F + I+ Y Q F++AL F + +K V
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 311 NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
N + + + + + +S L G +H +K G ++ +A++ MY+K G ++ A +AF
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 371 LTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVK 429
+ D + W +I ++HG EA++ F +M+ +G PN +TFIG+L ACSH G V+
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+G + + + K+ V P I HY C++G+ S+AG+ ++A + +R+ P E D ++W+TLL
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Query: 490 CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
C+ RN A P DS YV + N+HA + W+ A+ R +M R ++KE
Sbjct: 517 CYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 237/436 (54%), Gaps = 3/436 (0%)
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
LL + D AL G+++H+ +I+ + + T L Y KC L+ A ++M KN
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
V+ T ++ Y+Q ++AL +FA+M++ K +EF F+ VL +C + G+QIH
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
VK +S + VG+ L+D Y+K G+ + A + FE + E + S +AII GY Q G ++
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMIT 355
ALE F + S+G+ N Y ++ A S ++ L +G Q H +++ L Y ++++I
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 356 MYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLR--SGVRPNAV 413
MYSKCG L YA + F + + I+W A++ Y+ HG V +++R V+P+AV
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 414 TFIGLLNACSHSGLVKEGKQFLDSMSV-KYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
T + +L+ CSH + G D M +YG P +HY C++ + RAG + EA E I+
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 473 SMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDE 532
MP +P +LLG C H +++ ++ ++P ++ YV + NL+A AG W +
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 533 AAQYRKMMAERNLRKE 548
R MM ++ + KE
Sbjct: 478 VNNVRAMMMQKAVTKE 493
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 177/364 (48%), Gaps = 12/364 (3%)
Query: 13 YKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERVFDEMV 71
Y L C AL DG+ H + + ++ +L Y C A +V DEM
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQ 131
++++ SW +IS Y++ GH A+ +F+ M+ KP+ F T+L S S L LGKQ
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
+H +++ + + + + ++L +MY K G + A + ++ V+CT ++ GY Q
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
+AL +F ++ EG+ + ++ +L A + L ++ G+Q H + ++ L +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR-SKGVIL 310
L+D YSKCG A + F+++ E SW+A++ GY + G + LE F+ +R K V
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 311 NSFVYTNIFQACS--AISDL---VYGAQVHAD-AIKKGLVQYLSGESAMITMYSKCGKLD 364
++ + CS + D ++ V + K G Y ++ M + G++D
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY----GCIVDMLGRAGRID 410
Query: 365 YAYQ 368
A++
Sbjct: 411 EAFE 414
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 180/394 (45%), Gaps = 47/394 (11%)
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
R +ALL A + G ++ + +L AC + + G+++H++ +K + T
Sbjct: 35 RLQEALLEMAML---GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRT 91
Query: 251 PLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL 310
L+ FY KC E A + + + E N SW+A+I+ Y Q+G +AL F +
Sbjct: 92 RLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP 151
Query: 311 NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
N F + + +C S L G Q+H +K ++ S+++ MY+K G++ A + F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 371 LTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVK 429
+ + D ++ TAII YA G EA+++FH++ G+ PN VT+ LL A S L+
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 430 EGKQF------------------LDSMSVKYG------------VDPTIDHYNCMIGVYS 459
GKQ L M K G + T +N M+ YS
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYS 331
Query: 460 RAGLLQEALEMIRSMPFE----PDTLSWKTLLGGCWSHRNLETASI------AAGKIFHL 509
+ GL +E LE+ R M E PD ++ +L GC SH +E + AG+ +
Sbjct: 332 KHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC-SHGRMEDTGLNIFDGMVAGE-YGT 389
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
P + Y + ++ AG DEA ++ K M +
Sbjct: 390 KP-GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 280/547 (51%), Gaps = 13/547 (2%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
++ D R++ + K C + DG H + + ++ ++ +Y K+ A
Sbjct: 149 LTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSI-FCTLLGSFADP 123
+FDEM RD+ SW +IS Y + G+ A+ L + G++ S+ +LL + +
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEA 260
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
G +HS I+ G +++ + L ++Y + G L + ++M ++ ++ ++
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG-L 242
Y + A+ LF +M ++ D + + L DI R + ++++ G
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
++++G +V Y+K G ++A F + + SW+ II+GY Q+G +A+E +
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 303 IRSKGVIL-NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ +G I N + ++ ACS L G ++H +K GL + +++ MY KCG
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLN 420
+L+ A F I + +++ W +I + +HG E AV LF +ML GV+P+ +TF+ LL+
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
ACSHSGLV EG+ + M YG+ P++ HY CM+ +Y RAG L+ AL+ I+SM +PD
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
W LL C H N++ IA+ +F ++P +V + N++A AG W+ + R +
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 541 AERNLRK 547
+ LRK
Sbjct: 681 HGKGLRK 687
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 260/533 (48%), Gaps = 22/533 (4%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
LF+ C L K H RL N I ++ +YC + A FD + +RD
Sbjct: 60 LFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSR-MLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
+++W +IS Y G+ IR FS ML G+ P F ++L A + ++ G ++H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK--ACRTVID-GNKIH 173
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
++ GF DV + +L ++Y + + A + ++M ++ + ++ GY Q+
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 194 DALLLFAKMIKEGVK-LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPL 252
+AL L G++ +D +L AC D N G IHSYS+K GLESE+ V L
Sbjct: 234 EALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
+D Y++ GR + F+ + + SW++II Y + + +A+ F+ +R + +
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKG-LVQYLSGESAMITMYSKCGKLDYAYQAFL 371
++ S + D+ V ++KG ++ ++ +A++ MY+K G +D A F
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 372 TIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSG-VRPNAVTFIGLLNACSHSGLVK 429
+ D I+W II YA +G SEA+++++ M G + N T++ +L ACS +G ++
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+G + L +K G+ + + +Y + G L++AL + +P +++ W TL+
Sbjct: 469 QGMK-LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIAC 526
Query: 490 CWSHRNLETASIAAGKIFH--LDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
H + E A + ++ + P D T+VT+ + + +G DE +MM
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKP-DHITFVTLLSACSHSGLVDEGQWCFEMM 578
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 2 DEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDCK 58
+E I+ + ++ + C GAL G H RL + NG + F+ + MY C
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL--LKNGLYLDVFVVTSLADMYGKCG 500
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
A +F ++ + W T+I+ + GH A+ LF MLD G+KP F TLL
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 119 SFADPSALELGKQLHSQL-IRIGFTADVSIETTLSNMYIKCGWLDGA 164
+ + ++ G+ + G T + + +MY + G L+ A
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 247/503 (49%), Gaps = 2/503 (0%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L+MY A VF +M +DL SW ++++++ +G + A+ L M+ G
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
+ F + L + P E G+ LH ++ G + I L +MY K G + +
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
+M ++ VA L+ GY + AL F M EGV + VL AC D+
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 228 -NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITG 286
G+ +H+Y V G ES+ V L+ Y+KCG ++ F + N +W+A++
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
G ++ L+ +RS GV L+ F ++ A + ++ L G Q+H A+K G
Sbjct: 523 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 582
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLR 405
+A MYSKCG++ + +W +I A HG E V FH+ML
Sbjct: 583 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 642
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
G++P VTF+ LL ACSH GLV +G + D ++ +G++P I+H C+I + R+G L
Sbjct: 643 MGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLA 702
Query: 466 EALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHA 525
EA I MP +P+ L W++LL C H NL+ AA + L+P D + YV N+ A
Sbjct: 703 EAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFA 762
Query: 526 LAGNWDEAAQYRKMMAERNLRKE 548
G W++ RK M +N++K+
Sbjct: 763 TTGRWEDVENVRKQMGFKNIKKK 785
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 247/531 (46%), Gaps = 16/531 (3%)
Query: 20 CGMLGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
CG+L S G+ ++ + +K ++N ++ M + A +FD+M +RD SW
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
+I +AYA+ GH+ + R+FS M + +S+ TLL + G+ +H +++
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLL 198
+GF + V + TL MY G A + +M TK+ ++ LM + R DAL L
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 332
Query: 199 FAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSK 258
MI G ++ F+ L AC GR +H V GL +G LV Y K
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 392
Query: 259 CGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNI 318
G + + + + +W+A+I GY + DKAL F+ +R +GV N ++
Sbjct: 393 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 319 FQACSAISDLV-YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
AC DL+ G +HA + G ++++ITMY+KCG L + F ++ +
Sbjct: 453 LSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN 512
Query: 378 TIAWTAIICAYAYHGKSEAV-KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
I W A++ A A+HG E V KL KM GV + +F L+A + +++EG+Q L
Sbjct: 513 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LH 571
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI-----RSMPFEPDTLSWKTLLGGCW 491
++VK G + +N +YS+ G + E ++M+ RS+P SW L+
Sbjct: 572 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP------SWNILISALG 625
Query: 492 SHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
H E ++ + T+V++ + G D+ Y M+A
Sbjct: 626 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 676
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 221/456 (48%), Gaps = 6/456 (1%)
Query: 70 MVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA-DPSALEL 128
M R+ SW T++S G + + F +M DLGIKPSS + +L+ + S
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
G Q+H + + G +DV + T + ++Y G + + +M +N V+ T LMVGY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
+ + ++ M EGV +E S+V+ +C LKD + GRQI VK GLES+++V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
L+ G + A F+ + E + SW++I Y Q+G +++ F +R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
+NS + + + +G +H +K G + + ++ MY+ G+ A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 369 AFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
F + D I+W +++ ++ G+S +A+ L M+ SG N VTF L AC
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
++G+ L + V G+ N ++ +Y + G + E+ ++ MP D ++W L+
Sbjct: 361 FEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418
Query: 488 GGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
GG + + A +AA + ++ + S+ Y+T+ ++
Sbjct: 419 GGYAEDEDPDKA-LAAFQTMRVEGV-SSNYITVVSV 452
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 228/496 (45%), Gaps = 12/496 (2%)
Query: 6 ISIDPRSY--KHLFKMCGMLGAL-SDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFT 61
+ I P S+ L CG G++ +G H + + + ++ IL +Y +
Sbjct: 35 LGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS 94
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI---KPSSSIFCTLLG 118
+ +VF+EM DR++ SW +++ Y+++G I ++ M G+ + S S+ + G
Sbjct: 95 CSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG 154
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
D S LG+Q+ Q+++ G + +++E +L +M G +D A ++M+ ++ ++
Sbjct: 155 LLKDES---LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 211
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
+ Y Q ++ +F+ M + +++ S +L + GR IH V
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
K+G +S V V L+ Y+ GR A F+ + + SW++++ + GR AL
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
++ S G +N +T+ AC G +H + GL +A+++MY
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY-HGKSEAVKLFHKMLRSGVRPNAVTFIG 417
K G++ + + L + + D +AW A+I YA +A+ F M GV N +T +
Sbjct: 392 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 451
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
+L+AC G + E + L + V G + N +I +Y++ G L + ++ +
Sbjct: 452 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-N 510
Query: 478 PDTLSWKTLLGGCWSH 493
+ ++W +L H
Sbjct: 511 RNIITWNAMLAANAHH 526
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
+S+D S+ L L +G+ H ++ + FI N MY C
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 603
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
++ V+R L SW +ISA G+ F ML++GIKP F +LL + +
Sbjct: 604 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLS--NMYIKCGWLDGAEVATNKMTTK 174
++ G + + R F + +IE + ++ + G L AE +KM K
Sbjct: 664 LVDKGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 714
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 263/498 (52%), Gaps = 3/498 (0%)
Query: 23 LGALSDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATI 81
+G L G H+ +Q+ G+ + ++ MY C AE++F + DRD+ SW+ +
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGF 141
I++Y + G AI LF M+ + IKP++ ++L A +A LGK +H I+
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI 432
Query: 142 TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAK 201
+++ T + +MY KCG A A ++ K+AVA L GYTQ A ++
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR 261
M GV D +L+ CA D G ++ +K G +SE V L++ ++KC
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDA 552
Query: 262 FEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQ 320
AA F+ E + SW+ ++ GY G+ ++A+ TF+ ++ + N+ + NI +
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVR 612
Query: 321 ACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIA 380
A + +S L G VH+ I+ G ++++ MY+KCG ++ + + F+ I ++
Sbjct: 613 AAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS 672
Query: 381 WTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMS 439
W ++ AYA HG S AV LF M + ++P++V+F+ +L+AC H+GLV+EGK+ + M
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMG 732
Query: 440 VKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA 499
++ ++ ++HY CM+ + +AGL EA+EM+R M + W LL H NL +
Sbjct: 733 ERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLS 792
Query: 500 SIAAGKIFHLDPLDSATY 517
+ A ++ L+PL+ + Y
Sbjct: 793 NAALCQLVKLEPLNPSHY 810
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 258/501 (51%), Gaps = 11/501 (2%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
++ MYC+C AAE VF+E+ +D SW T+++AYA G + LF M + ++ +
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
+ L + A L G +H ++ G DVS+ T+L +MY KCG L+ AE
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+ ++ V+ + ++ Y QA +H +A+ LF M++ +K + + VL+ CA +
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
G+ IH Y++K +ESE+ T ++ Y+KCGRF A +AFE + + +++A+ GY Q
Sbjct: 420 GKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQ 479
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG 349
G +KA + +KN++ GV +S + Q C+ SD G+ V+ IK G
Sbjct: 480 IGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHV 539
Query: 350 ESAMITMYSKCGKLDYAYQAF--LTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRS 406
A+I M++KC L A F EK T++W ++ Y HG++ EAV F +M
Sbjct: 540 AHALINMFTKCDALAAAIVLFDKCGFEK-STVSWNIMMNGYLLHGQAEEAVATFRQMKVE 598
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
+PNAVTF+ ++ A + ++ G S+ ++ G N ++ +Y++ G+++
Sbjct: 599 KFQPNAVTFVNIVRAAAELSALRVGMSVHSSL-IQCGFCSQTPVGNSLVDMYAKCGMIES 657
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIA---AGKIFHLDPLDSATYVTMFNL 523
+ + + +SW T+L +H L + +++ + + L P DS +++++ +
Sbjct: 658 SEKCFIEIS-NKYIVSWNTMLSAYAAH-GLASCAVSLFLSMQENELKP-DSVSFLSVLSA 714
Query: 524 HALAGNWDEAAQYRKMMAERN 544
AG +E + + M ER+
Sbjct: 715 CRHAGLVEEGKRIFEEMGERH 735
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 250/519 (48%), Gaps = 10/519 (1%)
Query: 8 IDPRSYKHLFKMCGMLGALS--DGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
IDP Y F + G++ G H+ + M + +I +++MYC + +A
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
+VFD+M +D+ +W T++S A+ G A+ LF M + L+ + +
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
++ + LH +I+ GF + + L +MY C L AE ++ K+ + +M
Sbjct: 216 KSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMA 273
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
Y + L LF M V++++ + L+A A + D+ G IH Y+V+ GL
Sbjct: 274 AYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG 333
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+VSV T L+ YSKCG E A Q F +I + + SWSA+I Y Q+G+ D+A+ F+++
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+ N+ T++ Q C+ ++ G +H AIK + L +A+I+MY+KCG+
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFS 453
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A +AF + D +A+ A+ Y G + +A ++ M GV P++ T +G+L C+
Sbjct: 454 PALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
G + +K+G D + +I ++++ L A+ + FE T+SW
Sbjct: 514 FCSDYARGSCVYGQI-IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 484 KTLLGGCWSHRNLE--TASIAAGKIFHLDPLDSATYVTM 520
++ G H E A+ K+ P ++ T+V +
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQP-NAVTFVNI 610
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 210/426 (49%), Gaps = 6/426 (1%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD-LGIKPSSSIFCTLLGSFADPS 124
+FD + D + W ++I Y G A+ F M + GI P F L + A
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+ G ++H + +G +DV I T L MY K L A +KM K+ V ++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
G Q + ALLLF M V +D ++ A + L+ + R +H +K G
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
S G L+D Y C AA FE + ++ SW ++ Y +G F++ LE F +R
Sbjct: 235 AFSSG--LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
+ V +N + QA + + DLV G +H A+++GL+ +S +++++MYSKCG+L+
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A Q F+ IE D ++W+A+I +Y G+ EA+ LF M+R ++PNAVT +L C+
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+ GK + ++K ++ ++ +I +Y++ G AL+ +P + D +++
Sbjct: 413 GVAASRLGKS-IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAF 470
Query: 484 KTLLGG 489
L G
Sbjct: 471 NALAQG 476
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 171/360 (47%), Gaps = 10/360 (2%)
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
Q+H LI G L N Y D + V + + V ++ GYT+A
Sbjct: 23 QVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 191 RHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
H +AL F M +E G+ D++ F+ LKACA D G +IH ++GLES+V +G
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
T LV+ Y K +A Q F+ + + +W+ +++G Q+G AL F ++RS V
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
++ N+ A S + +H IKKG + S S +I MY C L A
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESV 256
Query: 370 FLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F + + D +W ++ AYA++G E ++LF M VR N V L A ++ G +
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
+G D +V+ G+ + ++ +YS+ G L+ A ++ ++ + D +SW ++
Sbjct: 317 VKGIAIHD-YAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIA 374
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 247/503 (49%), Gaps = 2/503 (0%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L+MY A VF +M +DL SW ++++++ +G + A+ L M+ G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
+ F + L + P E G+ LH ++ G + I L +MY K G + +
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
+M ++ VA L+ GY + AL F M EGV + VL AC D+
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 228 -NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITG 286
G+ +H+Y V G ES+ V L+ Y+KCG ++ F + N +W+A++
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
G ++ L+ +RS GV L+ F ++ A + ++ L G Q+H A+K G
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 599
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLR 405
+A MYSKCG++ + +W +I A HG E V FH+ML
Sbjct: 600 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 659
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
G++P VTF+ LL ACSH GLV +G + D ++ +G++P I+H C+I + R+G L
Sbjct: 660 MGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLA 719
Query: 466 EALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHA 525
EA I MP +P+ L W++LL C H NL+ AA + L+P D + YV N+ A
Sbjct: 720 EAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFA 779
Query: 526 LAGNWDEAAQYRKMMAERNLRKE 548
G W++ RK M +N++K+
Sbjct: 780 TTGRWEDVENVRKQMGFKNIKKK 802
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 247/531 (46%), Gaps = 16/531 (3%)
Query: 20 CGMLGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
CG+L S G+ ++ + +K ++N ++ M + A +FD+M +RD SW
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 229
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
+I +AYA+ GH+ + R+FS M + +S+ TLL + G+ +H +++
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 289
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLL 198
+GF + V + TL MY G A + +M TK+ ++ LM + R DAL L
Sbjct: 290 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 349
Query: 199 FAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSK 258
MI G ++ F+ L AC GR +H V GL +G LV Y K
Sbjct: 350 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 409
Query: 259 CGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNI 318
G + + + + +W+A+I GY + DKAL F+ +R +GV N ++
Sbjct: 410 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 469
Query: 319 FQACSAISDLV-YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
AC DL+ G +HA + G ++++ITMY+KCG L + F ++ +
Sbjct: 470 LSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN 529
Query: 378 TIAWTAIICAYAYHGKSEAV-KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
I W A++ A A+HG E V KL KM GV + +F L+A + +++EG+Q L
Sbjct: 530 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LH 588
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI-----RSMPFEPDTLSWKTLLGGCW 491
++VK G + +N +YS+ G + E ++M+ RS+P SW L+
Sbjct: 589 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP------SWNILISALG 642
Query: 492 SHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
H E ++ + T+V++ + G D+ Y M+A
Sbjct: 643 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 227/473 (47%), Gaps = 6/473 (1%)
Query: 53 MYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSI 112
MY A +FD M R+ SW T++S G + + F +M DLGIKPSS +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 113 FCTLLGSFADP-SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM 171
+L+ + S G Q+H + + G +DV + T + ++Y G + + +M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 172 TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
+N V+ T LMVGY+ + + ++ M EGV +E S+V+ +C LKD + GR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSG 291
QI VK GLES+++V L+ G + A F+ + E + SW++I Y Q+G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
+++ F +R +NS + + + +G +H +K G + +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRP 410
++ MY+ G+ A F + D I+W +++ ++ G+S +A+ L M+ SG
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 411 NAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
N VTF L AC ++G+ L + V G+ N ++ +Y + G + E+ +
Sbjct: 361 NYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 471 IRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
+ MP D ++W L+GG + + A +AA + ++ + S+ Y+T+ ++
Sbjct: 420 LLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGV-SSNYITVVSV 469
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 228/496 (45%), Gaps = 12/496 (2%)
Query: 6 ISIDPRSY--KHLFKMCGMLGAL-SDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFT 61
+ I P S+ L CG G++ +G H + + + ++ IL +Y +
Sbjct: 52 LGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS 111
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI---KPSSSIFCTLLG 118
+ +VF+EM DR++ SW +++ Y+++G I ++ M G+ + S S+ + G
Sbjct: 112 CSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG 171
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
D S LG+Q+ Q+++ G + +++E +L +M G +D A ++M+ ++ ++
Sbjct: 172 LLKDES---LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 228
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
+ Y Q ++ +F+ M + +++ S +L + GR IH V
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
K+G +S V V L+ Y+ GR A F+ + + SW++++ + GR AL
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
++ S G +N +T+ AC G +H + GL +A+++MY
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY-HGKSEAVKLFHKMLRSGVRPNAVTFIG 417
K G++ + + L + + D +AW A+I YA +A+ F M GV N +T +
Sbjct: 409 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 468
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
+L+AC G + E + L + V G + N +I +Y++ G L + ++ +
Sbjct: 469 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-N 527
Query: 478 PDTLSWKTLLGGCWSH 493
+ ++W +L H
Sbjct: 528 RNIITWNAMLAANAHH 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
+S+D S+ L L +G+ H ++ + FI N MY C
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 620
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
++ V+R L SW +ISA G+ F ML++GIKP F +LL + +
Sbjct: 621 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 680
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLS--NMYIKCGWLDGAEVATNKMTTK 174
++ G + + R F + +IE + ++ + G L AE +KM K
Sbjct: 681 LVDKGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 731
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 281/537 (52%), Gaps = 7/537 (1%)
Query: 8 IDPRS--YKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
+ P S + L ++C +L + G ++++ ++ + N + +L MY C +A
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
R+FD + +RD +W T+I + + + F ML G+ P+ + +L +
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+ LGK +H+++I AD+ ++ L +MY CG + A ++ N V+ ++
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS 374
Query: 185 GYTQALRHTDALLLFAKMIKEGV-KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
G ++ A+L++ ++++ + DE+ FS + A A + G+ +H KLG E
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE 434
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
V VGT L+ Y K E+A + F+ ++E + W+ +I G+ + G + A++ F +
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
+ + F +++ ACS ++ L G H AI+ G +S A++ MY K GK
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 364 DYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNAC 422
+ A F PD W +++ AY+ HG E A+ F ++L +G P+AVT++ LL AC
Sbjct: 555 ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC 614
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI-RSMPFEPDTL 481
SH G +GK FL + + G+ HY+CM+ + S+AGL+ EALE+I +S P
Sbjct: 615 SHRGSTLQGK-FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAE 673
Query: 482 SWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRK 538
W+TLL C + RNL+ AA +I LDP D+AT++ + NL+A+ G W++ A+ R+
Sbjct: 674 LWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 259/539 (48%), Gaps = 49/539 (9%)
Query: 40 ANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIG-AIRLF 98
A + + +N ++ MY C S A +VFD+M R++ S+ + SAY+ A L
Sbjct: 128 ATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLT 187
Query: 99 SRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC 158
+ M +KP+SS F +L+ A + +G L+SQ+I++G++ +V ++T++ MY C
Sbjct: 188 THMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC 247
Query: 159 GWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVL 218
G L+ A + + ++AVA ++VG + + D L+ F M+ GV +F +SIVL
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
C+ L + G+ IH+ + +++ + L+D Y CG A F I PN
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Query: 279 SWSAIITGYCQSGRFDKALETFKN-IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
SW++II+G ++G ++A+ ++ +R + + ++ A + V+G +H
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-A 396
K G + + + +++MY K + + A + F +++ D + WT +I ++ G SE A
Sbjct: 428 VTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD----------- 445
V+ F +M R R + + ++ ACS ++++G+ F ++++ G D
Sbjct: 488 VQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVF-HCLAIRTGFDCVMSVCGALVD 546
Query: 446 --------------------PTIDHYNCMIGVYSRAGLLQEAL---EMIRSMPFEPDTLS 482
P + +N M+G YS+ G++++AL E I F PD ++
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSAT------YVTMFNLHALAGNWDEAAQ 535
+ +LL C SHR S GK + Y M NL + AG DEA +
Sbjct: 607 YLSLLAAC-SHR----GSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALE 660
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 236/512 (46%), Gaps = 31/512 (6%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRD---LFSWATIISAYAEEGHMIGA--IRL-- 97
+ +N ++ MY C S A +VFD+M R+ LF + + Y G + + I+L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE-YVSMGSSLHSQIIKLGS 81
Query: 98 FSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN---- 153
F + + + +S L + L+ +Q+H+ ++ G A + E+ +N
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAG--AGAATESPYANNNLI 139
Query: 154 -MYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD----ALLLFAKMIKEGVK 208
MY++CG L+ A +KM +N V+ L Y+ R+ D A L M E VK
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS---RNPDFASYAFPLTTHMAFEYVK 196
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA 268
+ F+ +++ CA L+D+ G ++S +KLG V V T ++ YS CG E+A +
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 269 FESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDL 328
F+ + + +W+ +I G ++ + + L F+N+ GV F Y+ + CS +
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 329 VYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAY 388
G +HA I + L ++A++ MY CG + A+ F I P+ ++W +II
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 389 AYHGKSE-AVKLFHKMLR-SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
+ +G E A+ ++ ++LR S RP+ TF ++A + GK L K G +
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK-LLHGQVTKLGYER 435
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKI 506
++ ++ +Y + + A ++ M E D + W ++ G H L + +A
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVG---HSRLGNSELAVQ-- 489
Query: 507 FHLDPLDSATYVTMFNLHALAGNWDEAAQYRK 538
F ++ F+L ++ G + A R+
Sbjct: 490 FFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/499 (29%), Positives = 263/499 (52%), Gaps = 2/499 (0%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
++ MY + T A RVFDEM RD S+ T+I Y + + ++R+F LD KP
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPD 306
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
++L + L L K +++ +++ GF + ++ L ++Y KCG + A N
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
M K+ V+ ++ GY Q+ +A+ LF M+ + D + +++ L D+
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
G+ +HS +K G+ ++SV L+D Y+KCG + + F S+ + +W+ +I+ +
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG 349
G F L+ +R V+ + + C++++ G ++H ++ G L
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 350 ESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGV 408
+A+I MYSKCG L+ + + F + + D + WT +I AY +G+ E A++ F M +SG+
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 409 RPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL 468
P++V FI ++ ACSHSGLV EG + M Y +DP I+HY C++ + SR+ + +A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 469 EMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAG 528
E I++MP +PD W ++L C + ++ETA + +I L+P D + N +A
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 529 NWDEAAQYRKMMAERNLRK 547
WD+ + RK + ++++ K
Sbjct: 727 KWDKVSLIRKSLKDKHITK 745
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 249/489 (50%), Gaps = 5/489 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
+ E+ +S D ++ + K C L G L + ++ M + F+ N ++ MY
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGL 156
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
T A +VFDEM RDL SW ++IS Y+ G+ A+ ++ + + I P S ++L +
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
F + ++ G+ LH ++ G + V + L MY+K A ++M +++V+
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
++ GY + +++ +F + + + K D S VL+AC L+D++ + I++Y +K
Sbjct: 277 NTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 240 LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET 299
G E +V L+D Y+KCG A F S+ + SW++II+GY QSG +A++
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Query: 300 FKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSK 359
FK + + Y + + ++DL +G +H++ IK G+ LS +A+I MY+K
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAK 455
Query: 360 CGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGL 418
CG++ + + F ++ DT+ W +I A G + +++ +M +S V P+ TF+
Sbjct: 456 CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 419 LNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEP 478
L C+ + GK+ + +++G + + N +I +YS+ G L+ + + M
Sbjct: 516 LPMCASLAAKRLGKE-IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RR 573
Query: 479 DTLSWKTLL 487
D ++W ++
Sbjct: 574 DVVTWTGMI 582
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 181/397 (45%), Gaps = 25/397 (6%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
+ + CG L LS K +N + + + N ++ +Y C A VF+ M +D
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
SW +IIS Y + G ++ A++LF M+ + + + L+ + L+ GK LHS
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
I+ G D+S+ L +MY KCG + + + M T + V ++ +
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVD 254
L + +M K V D F + L CA+L G++IH ++ G ESE+ +G L++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 255 FYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFV 314
YSKCG E + + FE + + +W+ +I Y G +KALETF ++ G++ +S V
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQY------------LSGESAMITMYSKCGK 362
+ I ACS H+ + +GL + + + ++ + S+ K
Sbjct: 613 FIAIIYACS-----------HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK 661
Query: 363 LDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVK 398
+ A + + KPD W +++ A G E +
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 215/420 (51%), Gaps = 6/420 (1%)
Query: 73 RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQL 132
++++ W +II A+++ G A+ + ++ + + P F +++ + A E+G +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 133 HSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRH 192
+ Q++ +GF +D+ + L +MY + G L A ++M ++ V+ L+ GY+ +
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 193 TDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPL 252
+AL ++ ++ + D F S VL A L + G+ +H +++K G+ S V V L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF-KNIRSKGVILN 311
V Y K R A + F+ + + S++ +I GY + ++++ F +N+ L
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL- 307
Query: 312 SFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFL 371
+++ +AC + DL ++ +K G V + + +I +Y+KCG + A F
Sbjct: 308 -LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 372 TIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKE 430
++E DT++W +II Y G EA+KLF M+ + + +T++ L++ + +K
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
GK L S +K G+ + N +I +Y++ G + ++L++ SM DT++W T++ C
Sbjct: 427 GKG-LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISAC 484
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 147/320 (45%), Gaps = 44/320 (13%)
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE-PND 277
+A ++ ++N R+IH+ + LGL+S L+D YS ++ F + N
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
+ W++II + ++G F +ALE + +R V + + + ++ +AC+ + D G V+
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEA 396
+ G L +A++ MYS+ G L A Q F + D ++W ++I Y+ HG EA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEG------------------------- 431
++++H++ S + P++ T +L A + +VK+G
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 432 ----------KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM--PFEPD 479
++ D M V+ V YN MI Y + +++E++ M F+PD
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVS-----YNTMICGYLKLEMVEESVRMFLENLDQFKPD 306
Query: 480 TLSWKTLLGGCWSHRNLETA 499
L+ ++L C R+L A
Sbjct: 307 LLTVSSVLRACGHLRDLSLA 326
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 263/504 (52%), Gaps = 2/504 (0%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
++ N ++ MY C AER+ +M + D+ +W ++I Y + A+ FS M+
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G K +++ + S L G +LH+ +I+ G+ +++ + TL +MY KC
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
A +M K+ ++ T ++ GY Q H +AL LF + K+ +++DE + +L+A + L
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
K + ++IH + ++ GL V + LVD Y KC A + FESI+ + SW+++I
Sbjct: 501 KSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 559
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+ +G +A+E F+ + G+ +S I A +++S L G ++H ++KG
Sbjct: 560 SSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFC 619
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKM 403
S A++ MY+ CG L A F IE+ + +T++I AY HG AV+LF KM
Sbjct: 620 LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
V P+ ++F+ LL ACSH+GL+ EG+ FL M +Y ++P +HY C++ + RA
Sbjct: 680 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 739
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
+ EA E ++ M EP W LL C SH E IAA ++ L+P + V + N+
Sbjct: 740 VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNV 799
Query: 524 HALAGNWDEAAQYRKMMAERNLRK 547
A G W++ + R M + K
Sbjct: 800 FAEQGRWNDVEKVRAKMKASGMEK 823
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 279/573 (48%), Gaps = 50/573 (8%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
S+ L K C L + G H+ L ++ + FI N ++ MY +AA R+FD
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 71 VDR-DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELG 129
++ D W +I+S+Y+ G + + LF M G P+S + L + S +LG
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 130 KQLHSQLIRIG-FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
K++H+ +++ ++++ + L MY +CG + AE +M + V L+ GY Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
L + +AL F+ MI G K DE + ++ A L ++ G ++H+Y +K G +S + V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
G L+D YSKC +AF + + + SW+ +I GY Q+ +ALE F+++ K +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
++ + +I +A S + ++ ++H ++KGL+ + ++ ++ +Y KC + YA +
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVI-QNELVDVYGKCRNMGYATR 542
Query: 369 AFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
F +I+ D ++WT++I + A +G +SEAV+LF +M+ +G+ ++V + +L+A +
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSA 602
Query: 428 VKEGKQ---------FLDSMSVKYGVDPTIDHYNC------------------------M 454
+ +G++ F S+ V +D Y C M
Sbjct: 603 LNKGREIHCYLLRKGFCLEGSIAVAV---VDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 455 IGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKI----F 507
I Y G + A+E+ M E PD +S+ LL C SH L KI +
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC-SHAGLLDEGRGFLKIMEHEY 718
Query: 508 HLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
L+P YV + ++ A EA ++ KMM
Sbjct: 719 ELEPWPE-HYVCLVDMLGRANCVVEAFEFVKMM 750
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 248/540 (45%), Gaps = 44/540 (8%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMANGNK--FIDNCILQMYCDCKSFTAAERVFDE 69
++ ++ ++CG A+S G+ H+R+ + + F+ ++ MY C S AE+VFDE
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 70 MVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELG 129
M DR F+W T+I AY G A+ L+ M G+ S F LL + A + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK-NAVACTGLMVGYTQ 188
+LHS L+++G+ + I L +MY K L A + K +AV ++ Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE-SEVS 247
+ + + L LF +M G + + L AC G++IH+ +K SE+
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
V L+ Y++CG+ A + + + +W+++I GY Q+ + +ALE F ++ + G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+ T+I A +S+L+ G ++HA IK G L + +I MYSKC Y
Sbjct: 382 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG 441
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
+AFL + D I+WT +I YA + EA++LF + + + + + +L A S
Sbjct: 442 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS--- 498
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
L SM + + +C I R GLL DT+ L
Sbjct: 499 -------VLKSMLI-------VKEIHCHI---LRKGLL--------------DTVIQNEL 527
Query: 487 LGGCWSHRNLETASIAAGKIFH-LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
+ RN+ A+ ++F + D ++ +M + AL GN EA + + M E L
Sbjct: 528 VDVYGKCRNMGYAT----RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 17/294 (5%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAER 65
+ ID + + +L ++ K H + R + I N ++ +Y C++ A R
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATR 542
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VF+ + +D+ SW ++IS+ A G+ A+ LF RM++ G+ S +L + A SA
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSA 602
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
L G+++H L+R GF + SI + +MY CG L A+ +++ K + T ++
Sbjct: 603 LNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 662
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-----HSYSVKL 240
Y A+ LF KM E V D F +L AC+ ++ GR H Y ++
Sbjct: 663 YGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEP 722
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQS 290
E V LVD GR +AFE ++ EP W A++ C+S
Sbjct: 723 WPEHYVC----LVDML---GRANCVVEAFEFVKMMKTEPTAEVWCALLAA-CRS 768
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 239/473 (50%), Gaps = 37/473 (7%)
Query: 112 IFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW-LDG-AEVATN 169
+ +L+ D L KQ+H ++R G I T L K G +D A
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+ +N T ++ GY + +A+ ++ M KE + F FS +LKAC +KD+N
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKC------------------------------ 259
GRQ H+ + +L V VG ++D Y KC
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 260 -GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNI 318
G E A + FES+ + +W+A++TG+ Q+ + +ALE F + G+ +
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 319 FQACSAISDLVYGAQVHADAIKKGLV--QYLSGESAMITMYSKCGKLDYAYQAFLTIEKP 376
AC+ + Y + A K G ++ SA+I MYSKCG ++ A F+++
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 377 DTIAWTAIICAYAYHGKS-EAVKLFHKML-RSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
+ ++++I A HG++ EA+ LFH M+ ++ ++PN VTF+G L ACSHSGLV +G+Q
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 435 LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR 494
DSM +GV PT DHY CM+ + R G LQEALE+I++M EP W LLG C H
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 495 NLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
N E A IAA +F L+P Y+ + N++A AG+W + RK++ E+ L+K
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKK 520
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 197/470 (41%), Gaps = 55/470 (11%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A RV + + R+ F W +I YA EG AI ++ M I P S F LL +
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----------- 171
L LG+Q H+Q R+ V + T+ +MY+KC +D A ++M
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 172 --------------------TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDE 211
TK+ VA T ++ G+ Q + +AL F +M K G++ DE
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLES--EVSVGTPLVDFYSKCGRFEAACQAF 269
+ + ACA L + + K G V +G+ L+D YSKCG E A F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI-LNSFVYTNIFQACSAISDL 328
S+ N F++S++I G GR +AL F + ++ I N+ + ACS +
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 329 VYGAQVHADAIKKGLVQYLSGE-SAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIIC 386
G QV + VQ + M+ + + G+L A + T+ +P W A++
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 387 AYAYHGKSEAVKLFHKMLRSGVRPNAV-TFIGLLNACSHSG----------LVKEGKQFL 435
A H E ++ + L + P+ + +I L N + +G L+KE K
Sbjct: 462 ACRIHNNPEIAEIAAEHLFE-LEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKE-KGLK 519
Query: 436 DSMSVKYGVDPTIDHYNCMIGVYSRA------GLLQEALEMIRSMPFEPD 479
+ +V + VD + G + L+E +E + + ++PD
Sbjct: 520 KTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPD 569
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 38/315 (12%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERVFDEM 70
++ L K CG + L+ G+ FH + R+ ++ N ++ MY C+S A +VFDEM
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFS------------------------------- 99
+RD+ SW +I+AYA G+M A LF
Sbjct: 211 PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFD 270
Query: 100 RMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD--VSIETTLSNMYIK 157
RM GI+ + + A A + + + G++ V I + L +MY K
Sbjct: 271 RMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 158 CGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG-VKLDEFVFSI 216
CG ++ A M KN + +++G R +AL LF M+ + +K + F
Sbjct: 331 CGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVG 390
Query: 217 VLKACAALKDINTGRQI-HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-E 274
L AC+ ++ GRQ+ S G++ T +VD + GR + A + +++ E
Sbjct: 391 ALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVE 450
Query: 275 PNDFSWSAIITGYCQ 289
P+ W A++ G C+
Sbjct: 451 PHGGVWGALL-GACR 464
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 266/518 (51%), Gaps = 33/518 (6%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA- 121
A ++F ++ + D+ W +I +++ +RL+ ML G+ P S F LL
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
D AL GK+LH +++ G +++ ++ L MY CG +D A ++ ++ +
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ GY + + +++ L +M + V +VL AC+ +KD + +++H Y +
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR--------- 292
E + + LV+ Y+ CG + A + F S++ + SW++I+ GY + G
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 293 ----------------------FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVY 330
F+++LE F+ ++S G+I + F ++ AC+ + L
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 331 GAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY 390
G + K + + +A+I MY KCG + A + F +++ D WTA++ A
Sbjct: 387 GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLAN 446
Query: 391 HGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
+G+ EA+K+F +M ++P+ +T++G+L+AC+HSG+V + ++F M + ++P++
Sbjct: 447 NGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLV 506
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL 509
HY CM+ + RAGL++EA E++R MP P+++ W LLG H + A +AA KI L
Sbjct: 507 HYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+P + A Y + N++A W + + R+ + + ++K
Sbjct: 567 EPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 206/478 (43%), Gaps = 48/478 (10%)
Query: 8 IDPRSYKHLFKMCGML---GALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAA 63
+ P S+ F + G+ GAL+ GK H + + G N ++ N +++MY C A
Sbjct: 130 VTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMA 189
Query: 64 ERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
VFD D+FSW +IS Y +I L M + P+S +L + +
Sbjct: 190 RGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKV 249
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
+L K++H + + +E L N Y CG +D A M ++ ++ T ++
Sbjct: 250 KDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 309
Query: 184 VGYTQA----------------------------LR---HTDALLLFAKMIKEGVKLDEF 212
GY + LR ++L +F +M G+ DEF
Sbjct: 310 KGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
VL ACA L + G I +Y K ++++V VG L+D Y KCG E A + F +
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQAC--SAISDLV- 329
+ + F+W+A++ G +G+ +A++ F ++ + + Y + AC S + D
Sbjct: 430 DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR 489
Query: 330 -YGAQVHAD-AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIIC 386
+ A++ +D I+ LV Y M+ M + G + AY+ + P++I W A++
Sbjct: 490 KFFAKMRSDHRIEPSLVHY----GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLG 545
Query: 387 AYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLN---ACSHSGLVKEGKQFLDSMSVK 441
A H +L K + N + L N C ++E ++ + +++K
Sbjct: 546 ASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIK 603
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 159/353 (45%), Gaps = 21/353 (5%)
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
L I E + D F +L C K + +Q+HS S+ G+ + L F+
Sbjct: 21 LLMSTITESISNDYSRFISILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWC 77
Query: 258 K--CGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY 315
G A + F I EP+ W+ +I G+ + + + + N+ +GV +S +
Sbjct: 78 SRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTF 137
Query: 316 TNIFQACSAISD-LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE 374
+ L G ++H +K GL L ++A++ MYS CG +D A F
Sbjct: 138 PFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRC 197
Query: 375 KPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSH---SGLVKE 430
K D +W +I Y + E+++L +M R+ V P +VT + +L+ACS L K
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
+++ +P++ N ++ Y+ G + A+ + RSM D +SW +++ G
Sbjct: 258 VHEYVSECK----TEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGY 312
Query: 491 WSHRNLETASIAAGKIFHLDPL-DSATYVTMFNLHALAGNWDEAAQ-YRKMMA 541
NL+ A F P+ D ++ M + + AG ++E+ + +R+M +
Sbjct: 313 VERGNLKLART----YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/527 (29%), Positives = 282/527 (53%), Gaps = 13/527 (2%)
Query: 28 DGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYA 86
DG+ H + R G + N IL MY D S +A ++FDEM +RD+ SW+ +I +Y
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSA-RKLFDEMSERDVISWSVVIRSYV 201
Query: 87 EEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFT-AD 144
+ + ++LF M+ + +P ++L + +++G+ +H IR GF AD
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 145 VSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK 204
V + +L +MY K +D A ++ T +N V+ ++ G+ R+ +AL +F M++
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 205 EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEA 264
E V++DE +L+ C + + IH ++ G ES + L+D Y+ C +
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 265 ACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSA 324
A +S+ + S S +I+G +GR D+A+ F ++R N+ ++ ACS
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSV 438
Query: 325 ISDLVYGAQVHADAIKKGL-VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
+DL H AI++ L + +S ++++ Y+KCG ++ A + F I + + I+WT
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 384 IICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY 442
II AYA +G +A+ LF +M + G PNAVT++ L+AC+H GLVK+G SM V+
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEE 557
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP--FEPDTLSWKTLLGGCWSH-RNLETA 499
P++ HY+C++ + SRAG + A+E+I+++P + +W +L GC + + L
Sbjct: 558 DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 500 SIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
S ++ L+PL S+ Y+ + A +W++ A R+++ ER +R
Sbjct: 618 SEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVR 664
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 226/485 (46%), Gaps = 30/485 (6%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFD 68
DP + +FK C L L G N I Y C + R FD
Sbjct: 44 DPFVFPIVFKACAKLSWLFQG------------------NSIADFYMKCGDLCSGLREFD 85
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
M RD SW I+ + G + FS++ G +P++S ++ A S
Sbjct: 86 CMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVI--HACRSLWFD 143
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
G+++H +IR GF S++ ++ MY L ++ ++M+ ++ ++ + ++ Y Q
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKL-FDEMSERDVISWSVVIRSYVQ 202
Query: 189 ALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE-SEV 246
+ L LF +M+ E + D + VLKAC ++DI+ GR +H +S++ G + ++V
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
V L+D YSK ++A + F+ N SW++I+ G+ + R+D+ALE F + +
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
V ++ ++ + C + +H I++G S++I Y+ C +D A
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
++ D ++ + +I A+ G+S EA+ +F M + PNA+T I LLNACS S
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVS 439
Query: 426 GLVKEGKQFLDSMSVKYGVDPT-IDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWK 484
++ K + ++++ + I ++ Y++ G ++ A + E + +SW
Sbjct: 440 ADLRTSK-WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWT 497
Query: 485 TLLGG 489
++
Sbjct: 498 VIISA 502
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 186/403 (46%), Gaps = 37/403 (9%)
Query: 3 EACISIDPRSYKHLFKMCGMLGALSDGKLFHN-RLQRMAN-GNKFIDNCILQMYCDCKSF 60
EA D + + K C ++ + G+ H ++R + + F+ N ++ MY
Sbjct: 219 EAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDV 278
Query: 61 TAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS- 119
+A RVFDE R++ SW +I++ + A+ +F M+ ++ +LL
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 120 --FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV 177
F P K +H +IR G+ ++ ++L + Y C +D A + MT K+ V
Sbjct: 339 KFFEQPLPC---KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
+C+ ++ G A R +A+ +F M + V S+ L AC+ D+ T + H +
Sbjct: 396 SCSTMISGLAHAGRSDEAISIFCHMRDTPNAIT--VISL-LNACSVSADLRTSKWAHGIA 452
Query: 238 VKLGLE-SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKA 296
++ L +++SVGT +VD Y+KCG E A + F+ I E N SW+ II+ Y +G DKA
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKA 512
Query: 297 LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY---------- 346
L F ++ KG N+ Y AC+ H +KKGL+ +
Sbjct: 513 LALFDEMKQKGYTPNAVTYLAALSACN-----------HGGLVKKGLMIFKSMVEEDHKP 561
Query: 347 -LSGESAMITMYSKCGKLDYAYQAFLTIE---KPDTIAWTAII 385
L S ++ M S+ G++D A + + K AW AI+
Sbjct: 562 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 604
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 220/400 (55%), Gaps = 2/400 (0%)
Query: 151 LSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLD 210
L N Y++ G L A ++M + ++ G Q + + L LF +M G D
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 211 EFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFE 270
E+ V A L+ ++ G+QIH Y++K GLE ++ V + L Y + G+ +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 271 SIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVY 330
S+ N +W+ +I G Q+G + L +K ++ G N + + +CS ++
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 331 GAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY 390
G Q+HA+AIK G ++ S++I+MYSKCG L A +AF E D + W+++I AY +
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 391 HGK-SEAVKLFHKML-RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTI 448
HG+ EA++LF+ M ++ + N V F+ LL ACSHSGL +G + D M KYG P +
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 449 DHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH 508
HY C++ + RAG L +A +IRSMP + D + WKTLL C H+N E A +I
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 509 LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
+DP DSA YV + N+HA A W + ++ RK M ++N++KE
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 185/387 (47%), Gaps = 24/387 (6%)
Query: 38 RMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISA-----YAEEGHMI 92
RM N N ++ Y A +VFDEM DR L +W +I+ + EEG
Sbjct: 19 RMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG--- 75
Query: 93 GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
+ LF M LG P ++ A ++ +G+Q+H I+ G D+ + ++L+
Sbjct: 76 --LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLA 133
Query: 153 NMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEF 212
+MY++ G L E+ M +N VA L++G Q L L+ M G + ++
Sbjct: 134 HMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKI 193
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
F VL +C+ L G+QIH+ ++K+G S V+V + L+ YSKCG A +AF
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSK-GVILNSFVYTNIFQAC--SAISDL- 328
+ ++ WS++I+ Y G+ D+A+E F + + + +N + N+ AC S + D
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Query: 329 --VYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAII 385
++ V K GL Y + ++ + + G LD A ++ K D + W ++
Sbjct: 314 LELFDMMVEKYGFKPGLKHY----TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 369
Query: 386 CAYAYHGKSE-AVKLFHKMLRSGVRPN 411
A H +E A ++F ++L+ + PN
Sbjct: 370 SACNIHKNAEMAQRVFKEILQ--IDPN 394
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 256/475 (53%), Gaps = 1/475 (0%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
++F + ++I+ + + LF + G+ F +L + S+ +LG LH
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
S +++ GF DV+ T+L ++Y G L+ A +++ ++ V T L GYT + RH
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+A+ LF KM++ GVK D + VL AC + D+++G I Y ++ ++ V T LV
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
+ Y+KCG+ E A F+S+ E + +WS +I GY + + +E F + + + + F
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI 373
+C+++ L G + + + L +A+I MY+KCG + ++ F +
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 374 EKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
++ D + A I A +G + + +F + + G+ P+ TF+GLL C H+GL+++G
Sbjct: 375 KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGL 434
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWS 492
+F +++S Y + T++HY CM+ ++ RAG+L +A +I MP P+ + W LL GC
Sbjct: 435 RFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL 494
Query: 493 HRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
++ + A ++ L+P ++ YV + N++++ G WDEAA+ R MM ++ ++K
Sbjct: 495 VKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 5/286 (1%)
Query: 6 ISIDPRSY--KHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTA 62
+ + P SY + C +G L G+ ++ M N F+ ++ +Y C
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A VFD MV++D+ +W+T+I YA I LF +ML +KP L S A
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCAS 325
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
AL+LG+ S + R F ++ + L +MY KCG + +M K+ V
Sbjct: 326 LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAA 385
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG-RQIHSYSVKLG 241
+ G + + +F + K G+ D F +L C I G R ++ S
Sbjct: 386 ISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYA 445
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAF-ESIREPNDFSWSAIITG 286
L+ V +VD + + G + A + + PN W A+++G
Sbjct: 446 LKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 243/458 (53%), Gaps = 35/458 (7%)
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
L K LH+ ++++G + TL N+Y KCG A ++M ++ +A ++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 186 YTQA-LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
QA L + + G++ D+FVFS ++KACA L I+ GRQ+H + + +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF---- 300
+ V + LVD Y+KCG +A F+SIR N SW+A+++GY +SGR ++ALE F
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 301 -KNIRS------------KGV---------------ILNSFVYTNIFQACSAISDLVYGA 332
KN+ S KG+ IL+ V ++I AC+ ++ + G
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 333 QVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG 392
QVH I G + +A+I MY+KC + A F + D ++WT++I A HG
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 393 KSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY 451
++E A+ L+ M+ GV+PN VTF+GL+ ACSH G V++G++ SM+ YG+ P++ HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 452 NCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH-RNLETASIAAGKIFHLD 510
C++ + R+GLL EA +I +MPF PD +W LL C R IA +
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
D +TY+ + N++A A W + ++ R+ + E +RK+
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKD 476
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 44/475 (9%)
Query: 13 YKHLFKMCGMLGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKSFTAAERVFDEMV 71
Y H ++C L+ K H + ++ + N ++ +Y C + + A +VFDEM
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 72 DRDLFSWATIISAYAEEGHMIGAI--RLFSRMLDLGIKPSSSIFCTLLGSFADPSALELG 129
RD +WA++++A + ++ G S G++P +F L+ + A+ +++ G
Sbjct: 66 HRDHIAWASVLTAL-NQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
+Q+H I + D ++++L +MY KCG L+ A+ + + KN ++ T ++ GY ++
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKS 184
Query: 190 LRHTDALLL-------------------------------FAKMIKEGVK-LDEFVFSIV 217
R +AL L F +M +E V LD V S +
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 218 LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND 277
+ ACA L GRQ+H + LG +S V + L+D Y+KC AA F +R +
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
SW+++I G Q G+ +KAL + ++ S GV N + + ACS + + G ++
Sbjct: 305 VSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 338 AIKK-GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
K G+ L + ++ + + G LD A T+ PD W A++ A G+ +
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQ 424
Query: 396 -AVKLFHKMLRSGVRPNAVTFIGLLN---ACSHSGLVKEGKQFLDSMSVKYGVDP 446
+++ ++ S + T+I L N + S G V E ++ L M V+ DP
Sbjct: 425 MGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRK--DP 477
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 281/543 (51%), Gaps = 10/543 (1%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDCKSFTAAE 64
+ P Y K+C L H + NG N + + ++ +Y A
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLLLIHG--NSITNGFCSNLQLKDMLIDLYLKQGDVKHAR 67
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
++FD + RD+ SW +IS ++ G+ A+ LF M +K + + ++L S D
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
L+ G Q+H + + ++ + + L ++Y +CG ++ A + + M ++ V+ ++
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
GYT + LF M+ EG K D F F +L+A +K + ++H ++KLG
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR-FDKALETFKNI 303
++ LV+ Y KCG A + E ++ + S +A+ITG+ Q A + FK++
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESAMITMYSKCGK 362
++ V +++ + C+ I+ + G Q+H A+K +++ ++ +++I MY+K G+
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNA 421
++ A AF +++ D +WT++I Y HG E A+ L+++M ++PN VTF+ LL+A
Sbjct: 368 IEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP--FEPD 479
CSH+G + G + D+M K+G++ +H +C+I + +R+G L+EA +IRS
Sbjct: 428 CSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLS 487
Query: 480 TLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
+ +W L C H N++ + +AA ++ ++P Y+ + +++A G WD A RK+
Sbjct: 488 SSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKL 547
Query: 540 MAE 542
M E
Sbjct: 548 MKE 550
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 266/523 (50%), Gaps = 39/523 (7%)
Query: 29 GKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE 87
GK H R+ G+ ++N +L++Y K AE +F EM + ++ SW +I + +
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 88 EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSI 147
E ++ +RM D G +P+ ++LG+ +E G+++ S + + +A
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSA---- 383
Query: 148 ETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGV 207
W ++ GY+ + +A+ F +M + +
Sbjct: 384 ------------W-------------------NAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFE-AAC 266
K D+ S++L +CA L+ + G+QIH ++ + + + L+ YS+C + E + C
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL-NSFVYTNIFQACSAI 325
+ I E + W+++I+G+ + KAL F+ + V+ N + + +CS +
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 326 SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
L++G Q H +K G V E+A+ MY KCG++D A Q F + + +T+ W +I
Sbjct: 533 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592
Query: 386 CAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
Y ++G+ EAV L+ KM+ SG +P+ +TF+ +L ACSHSGLV+ G + L SM +G+
Sbjct: 593 HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
+P +DHY C++ RAG L++A ++ + P++ ++ W+ LL C H ++ A A
Sbjct: 653 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE 712
Query: 505 KIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
K+ LDP SA YV + N ++ WD++A + +M + + K
Sbjct: 713 KLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHK 755
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 224/501 (44%), Gaps = 53/501 (10%)
Query: 43 NKFIDNCILQMYCDCKSFTA-AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM 101
N F+ N +L MY C RVF+ + + S+ +I A E ++ A+++F M
Sbjct: 172 NIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
Query: 102 LDLGIKPSSSIFCTLLG---------SFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
+ G++ S +L S ++ ELGKQ+H +R+GF D+ + +L
Sbjct: 232 CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLL 291
Query: 153 NMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEF 212
+Y K ++GAE+ +M N V+ ++VG+ Q R ++ +M G + +E
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
VL AC D+ TGR+I F SI
Sbjct: 352 TCISVLGACFRSGDVETGRRI-----------------------------------FSSI 376
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGA 332
+P+ +W+A+++GY +++A+ F+ ++ + + + + I +C+ + L G
Sbjct: 377 PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
Query: 333 QVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT-IEKPDTIAWTAIICAYAYH 391
Q+H I+ + + S +I +YS+C K++ + F I + D W ++I + ++
Sbjct: 437 QIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 496
Query: 392 G-KSEAVKLFHKMLRSGVR-PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
++A+ LF +M ++ V PN +F +L++CS + G+QF + VK G
Sbjct: 497 MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF-HGLVVKSGYVSDSF 555
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH--RNLETASIAAGKIF 507
+ +Y + G + A + ++ +T+ W ++ G + H R E + I
Sbjct: 556 VETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHG-YGHNGRGDEAVGLYRKMIS 613
Query: 508 HLDPLDSATYVTMFNLHALAG 528
+ D T+V++ + +G
Sbjct: 614 SGEKPDGITFVSVLTACSHSG 634
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 209/492 (42%), Gaps = 48/492 (9%)
Query: 28 DGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE 87
DG M+ + + N L C A VFD M +RD+ SW +IS
Sbjct: 56 DGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVR 115
Query: 88 EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSI 147
+G A+ ++ RM+ G PS ++L + + G + H ++ G ++ +
Sbjct: 116 KGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFV 175
Query: 148 ETTLSNMYIKCGWL-DGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG 206
L +MY KCG++ D ++ N V+ T ++ G + + +A+ +F M ++G
Sbjct: 176 GNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKG 235
Query: 207 VKLDEFVFSIVL------KACAALKDI---NTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
V++D S +L + C +L +I G+QIH +++LG ++ + L++ Y+
Sbjct: 236 VQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYA 295
Query: 258 KCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
K A F + E N SW+ +I G+ Q R DK++E +R G N +
Sbjct: 296 KNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCIS 355
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
+ AC D+ G ++ F +I +P
Sbjct: 356 VLGACFRSGDVETGRRI-----------------------------------FSSIPQPS 380
Query: 378 TIAWTAIICAYA-YHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
AW A++ Y+ Y EA+ F +M ++P+ T +L++C+ ++ GKQ +
Sbjct: 381 VSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ-IH 439
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNL 496
+ ++ + + +I VYS ++ + + E D W +++ G + H L
Sbjct: 440 GVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG-FRHNML 498
Query: 497 ETASIAAGKIFH 508
+T ++ + H
Sbjct: 499 DTKALILFRRMH 510
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 148/303 (48%), Gaps = 44/303 (14%)
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC 288
+G+ IH + V++G++S+ + L+D Y +CG + A + F+ + + +SW+A +T C
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 289 QSGRF-------------------------------DKALETFKNIRSKGVILNSFVYTN 317
+ G +KAL +K + G + + F +
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG-KLDYAYQAFLTIEKP 376
+ ACS + D V+G + H A+K GL + + +A+++MY+KCG +DY + F ++ +P
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 377 DTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLN------ACSHSGLV- 428
+ +++TA+I A K EAV++F M GV+ ++V +L+ C +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 429 --KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
+ GKQ + ++++ G + N ++ +Y++ + A + MP E + +SW +
Sbjct: 264 GNELGKQ-IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIM 321
Query: 487 LGG 489
+ G
Sbjct: 322 IVG 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 4 ACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTA 62
A + + S+ + C L +L G+ FH + + + F++ + MYC C +
Sbjct: 513 AVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A + FD ++ ++ W +I Y G A+ L+ +M+ G KP F ++L + +
Sbjct: 573 ARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 123 PSALELGKQLHSQLIRI-GFTADVSIETTLSNMYIKCGWLDGAE 165
+E G ++ S + RI G ++ + + + G L+ AE
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAE 676
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 260/534 (48%), Gaps = 65/534 (12%)
Query: 80 TIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRI 139
+ +S +A + + A+ + GI+ + +LL D +L+ GK +H L
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 140 GFT-ADVSIETTLSNMYIKCG-------------------W------------LDGAEVA 167
GF + + L MY+KCG W L A V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
+ M ++ V+ +++GY Q +AL + + + G+K +EF F+ +L AC + +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-------------- 273
RQ H + G S V + ++D Y+KCG+ E+A + F+ +
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 274 -----------------EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
E N SW+A+I GY + G ++AL+ F+ + + GV F ++
Sbjct: 256 AKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 317 NIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF-LTIEK 375
+ A ++I+ L +G ++H I+ + S++I MYSK G L+ + + F + +K
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK 375
Query: 376 PDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
D + W +I A A HG +A+++ M++ V+PN T + +LNACSHSGLV+EG ++
Sbjct: 376 HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRW 435
Query: 435 LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR 494
+SM+V++G+ P +HY C+I + RAG +E + I MPFEPD W +LG C H
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHG 495
Query: 495 NLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
N E AA ++ LDP SA Y+ + +++A G W+ + R +M +R + KE
Sbjct: 496 NEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKE 549
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 183/447 (40%), Gaps = 67/447 (14%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQ--RMANGNKFIDNCILQMYCDCKS-------------- 59
L + CG +L GK H L+ N + N ++ MY C
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 60 -----------------FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
A VFD M +RD+ SW T++ YA++G++ A+ +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
GIK + F LL + L+L +Q H Q++ GF ++V + ++ + Y KCG ++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 163 GAEVATNKMTTK-------------------------------NAVACTGLMVGYTQALR 191
A+ ++MT K N V+ T L+ GY +
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
AL LF KMI GVK ++F FS L A A++ + G++IH Y ++ + V +
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 252 LVDFYSKCGRFEAACQAFESIREPND-FSWSAIITGYCQSGRFDKALETFKNIRSKGVIL 310
L+D YSK G EA+ + F + +D W+ +I+ Q G KAL ++ V
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 311 NSFVYTNIFQACSAISDLVYGAQ-VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
N I ACS + G + + ++ G+V + +I + + G +
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRK 471
Query: 370 FLTIE-KPDTIAWTAIICAYAYHGKSE 395
+ +PD W AI+ HG E
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHGNEE 498
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/552 (28%), Positives = 285/552 (51%), Gaps = 15/552 (2%)
Query: 10 PRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN---GNKFIDNCILQMYCDCKSFTAAERV 66
P S+ ++F + ++ +F+ + ++ + + F+ + + MY + ++ RV
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
FD V+R++ W T+I Y + ++ +I LF + +G K S T L + + SAL
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 127 ---ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
ELG+Q H + + + I +L MY +CG + + M ++ V+ ++
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
+ Q + L+L +M K+G K+D + +L A + L++ G+Q H++ ++ G++
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ 451
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFES--IREPNDFSWSAIITGYCQSGRFDKALETFK 301
E + + L+D YSK G + + FE E + +W+++I+GY Q+G +K F+
Sbjct: 452 FE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ + + N+ +I ACS I + G Q+H +I++ L Q + SA++ MYSK G
Sbjct: 511 KMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAG 570
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLN 420
+ YA F ++ +++ +T +I Y HG E A+ LF M SG++P+A+TF+ +L+
Sbjct: 571 AIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
ACS+SGL+ EG + + M Y + P+ +HY C+ + R G + EA E ++ + E +
Sbjct: 631 ACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNI 690
Query: 481 LS-WKTLLGGCWSHRNLETASIAAGKIFHLDPLD--SATYVTMFNLHALAGNWDEAAQYR 537
W +LLG C H LE A + ++ D S V + N++A W + R
Sbjct: 691 AELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVR 750
Query: 538 KMMAERNLRKEV 549
+ M E+ L+KEV
Sbjct: 751 RGMREKGLKKEV 762
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 264/550 (48%), Gaps = 21/550 (3%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQR-MANGNKFIDNCILQMYC------DCKSFT 61
D +Y K C L GK H L R + N ++ + N ++ MY DC +
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
+VFD M +++ +W T+IS Y + G A R F M+ + +KPS F + + +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 122 DPSALELGKQLHSQLIRIG--FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+++ + ++++G + D+ + ++ +MY + G ++ + + +N
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 180 TGLMVGYTQALRHTDALLLFAKMI--KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
++ Y Q +++ LF + I KE V DE + + A +AL+ + GRQ H +
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVS-DEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL 297
K E + + L+ YS+CG + F S+RE + SW+ +I+ + Q+G D+ L
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
++ +G ++ T + A S + + G Q HA I++G +Q+ S +I MY
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMY 463
Query: 358 SKCGKLDYAYQAF--LTIEKPDTIAWTAIICAYAYHGKSEAVKL-FHKMLRSGVRPNAVT 414
SK G + + + F + D W ++I Y +G +E L F KML +RPNAVT
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 415 FIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
+L ACS G V GKQ L S++ +D + + ++ +YS+AG ++ A +M S
Sbjct: 524 VASILPACSQIGSVDLGKQ-LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF-SQ 581
Query: 475 PFEPDTLSWKTLLGGCWSHRNLETAS--IAAGKIFHLDPLDSATYVTMFNLHALAGNWDE 532
E +++++ T++ G H E A + + + P D+ T+V + + + +G DE
Sbjct: 582 TKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP-DAITFVAVLSACSYSGLIDE 640
Query: 533 AAQYRKMMAE 542
+ + M E
Sbjct: 641 GLKIFEEMRE 650
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 13/240 (5%)
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILN--SFVYTN 317
G + A Q F++I +P W+ II G+ + +AL + ++ N ++ Y++
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY------SKCGKLDYAYQAFL 371
+AC+ +L G VH I+ ++++ MY C + D + F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 372 TIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKE 430
+ + + +AW +I Y G+ +EA + F M+R V+P+ V+F+ + A S S +K+
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 431 GKQFLDSMSVKYGVDPTIDHY--NCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
F M +K G + D + + I +Y+ G ++ + + S E + W T++G
Sbjct: 233 ANVFYGLM-LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VERNIEVWNTMIG 290
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 250/458 (54%), Gaps = 9/458 (1%)
Query: 94 AIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN 153
A+ L+ RM G+KP + + + A + +G+ +HS L ++G DV I +L
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 154 MYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFV 213
MY KCG + A +++T ++ V+ ++ GY++A DA+ LF KM +EG + DE
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 214 FSIVLKACAALKDINTGRQIHSYSV--KLGLESEVSVGTPLVDFYSKCGRFEAACQAFES 271
+L AC+ L D+ TGR + ++ K+GL + +G+ L+ Y KCG ++A + F
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLST--FLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 272 IREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
+ + + +W+A+IT Y Q+G+ +A + F + GV ++ + + AC ++ L G
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
Q+ A + L + + ++ MY KCG+++ A + F + + W A+I AYA+
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 392 GKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G + EA+ LF +M V P+ +TFIG+L+AC H+GLV +G ++ MS +G+ P I+H
Sbjct: 414 GHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL- 509
Y +I + SRAG+L EA E + P +PD + +LG C +++ A + +
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMK 530
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+ ++ YV N+ A WDE+A+ R +M +R + K
Sbjct: 531 EAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVK 568
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 191/382 (50%), Gaps = 6/382 (1%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVF 67
D +Y +F C L + G+ H+ L ++ + I++ ++ MY C A ++F
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
DE+ +RD SW ++IS Y+E G+ A+ LF +M + G +P ++LG+ + L
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR 250
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYT 187
G+ L I + + L +MY KCG LD A N+M K+ VA T ++ Y+
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS 310
Query: 188 QALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVS 247
Q + ++A LF +M K GV D S VL AC ++ + G+QI +++ +L L+ +
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
V T LVD Y KCGR E A + FE++ N+ +W+A+IT Y G +AL F +
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---S 427
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQ-VHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
V + + + AC + G + H + GLV + + +I + S+ G LD A
Sbjct: 428 VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Query: 367 YQAFLTIE-KPDTIAWTAIICA 387
++ KPD I AI+ A
Sbjct: 488 WEFMERFPGKPDEIMLAAILGA 509
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 173/299 (57%), Gaps = 7/299 (2%)
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
H AL L+ +M G+K D+F ++ V ACA L++I GR +HS K+GLE +V +
Sbjct: 113 HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHS 172
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILN 311
L+ Y+KCG+ A + F+ I E + SW+++I+GY ++G A++ F+ + +G +
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 232
Query: 312 SFVYTNIFQACSAISDLVYGAQVHADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQA 369
++ ACS + DL G + AI K GL +L S +I+MY KCG LD A +
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLG--SKLISMYGKCGDLDSARRV 290
Query: 370 FLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F + K D +AWTA+I Y+ +GK SEA KLF +M ++GV P+A T +L+AC G +
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 350
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
+ GKQ +++ + + + I ++ +Y + G ++EAL + +MP + + +W ++
Sbjct: 351 ELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA-TWNAMI 407
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
M++ +S D + + CG +GAL GK ++ N ++ ++ MY C
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A RVF+ M ++ +W +I+AYA +GH A+ LF RM + PS F +L +
Sbjct: 385 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA 441
Query: 120 FADPSALELG-KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
+ G + H G + T + ++ + G LD A
Sbjct: 442 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 258/524 (49%), Gaps = 5/524 (0%)
Query: 29 GKLFHNRLQRMANGNK--FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYA 86
G++ H R+ + + F+ N ++ MY +A V R++ SW ++IS A
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 87 EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVS 146
+ GH A+ F M G+ P+ F + A GKQ+H+ ++ G DV
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 147 IETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG 206
+ + +MY K D A +++ +N + R +A+ F + +
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204
Query: 207 VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC 266
+ F L AC+ +N G Q+H ++ G +++VSV L+DFY KC + ++
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSE 264
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS 326
F + N SW +++ Y Q+ +KA + R V + F+ +++ AC+ ++
Sbjct: 265 IIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMA 324
Query: 327 DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIIC 386
L G +HA A+K + + + SA++ MY KCG ++ + QAF + + + + ++I
Sbjct: 325 GLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIG 384
Query: 387 AYAYHGKSE-AVKLFHKMLRSGV--RPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYG 443
YA+ G+ + A+ LF +M G PN +TF+ LL+ACS +G V+ G + DSM YG
Sbjct: 385 GYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG 444
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAA 503
++P +HY+C++ + RAG+++ A E I+ MP +P W L C H + +AA
Sbjct: 445 IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAA 504
Query: 504 GKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+F LDP DS +V + N A AG W EA R+ + ++K
Sbjct: 505 ENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 20 CGMLGALSDGKLFH-NRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
C + L G+ H + ++ F+ + ++ MY C +E+ FDEM +++L +
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 379
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSS--IFCTLLGSFADPSALELG-KQLHSQ 135
++I YA +G + A+ LF M G P+ + F +LL + + A+E G K S
Sbjct: 380 NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Query: 136 LIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
G + + +M + G ++ A KM + ++ G +
Sbjct: 440 RSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 240/437 (54%), Gaps = 2/437 (0%)
Query: 114 CTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
C LL S A + G QLH +++ G + + L N Y K + A
Sbjct: 19 CDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ 78
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
K++ + ++ + Q +L KM+ ++ D+ V K+CA L + GR +
Sbjct: 79 KSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 234 HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRF 293
H S+K G +++V VG+ LVD Y+KCG A + F+ + + N +WS ++ GY Q G
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
++AL FK + + +N + ++++ C+ + L G Q+H +IK S++
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLRSGVRPNA 412
+++YSKCG + AYQ F + + W A++ AYA H ++ V +LF +M SG++PN
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
+TF+ +LNACSH+GLV EG+ + D M + ++PT HY ++ + RAG LQEALE+I
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 473 SMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDE 532
+MP +P W LL C H+N E A+ AA K+F L P+ S ++++ N +A G +++
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 533 AAQYRKMMAERNLRKEV 549
AA+ RK++ +R +KE
Sbjct: 438 AAKARKLLRDRGEKKET 454
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 174/353 (49%), Gaps = 3/353 (0%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
+ N ++ Y + + R F++ + +W++IIS +A+ ++ +M+
Sbjct: 51 LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
++P + + S A S ++G+ +H ++ G+ ADV + ++L +MY KCG + A
Sbjct: 111 NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
++M +N V +G+M GY Q + +AL LF + + E + ++++ FS V+ CA
Sbjct: 171 RKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
+ GRQIH S+K +S VG+ LV YSKCG E A Q F + N W+A++
Sbjct: 231 TLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAML 290
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
Y Q K +E FK ++ G+ N + N+ ACS + LV + + D +K+ +
Sbjct: 291 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH-AGLVDEGRYYFDQMKESRI 349
Query: 345 QYLSGESA-MITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
+ A ++ M + G+L A + + P W A++ + H +E
Sbjct: 350 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTE 402
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 18 KMCGMLGALSDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLF 76
K C +L G+ H ++ + + F+ + ++ MY C A ++FDEM R++
Sbjct: 124 KSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVV 183
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
+W+ ++ YA+ G A+ LF L + + F +++ A+ + LELG+Q+H
Sbjct: 184 TWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLS 243
Query: 137 IRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDAL 196
I+ F + + ++L ++Y KCG +GA N++ KN ++ Y Q +
Sbjct: 244 IKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVI 303
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
LF +M G+K + F VL AC+ ++ GR + +E LVD
Sbjct: 304 ELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDML 363
Query: 257 SKCGRFEAACQAFESIR-EPNDFSWSAIIT 285
+ GR + A + ++ +P + W A++T
Sbjct: 364 GRAGRLQEALEVITNMPIDPTESVWGALLT 393
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 273/544 (50%), Gaps = 14/544 (2%)
Query: 17 FKMCGMLGA-----LSDGKLFH-NRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
F +LGA L GK H N + R N + ++ Y A RV +
Sbjct: 226 FTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSS 285
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
++D+F W +++S + A+ F M LG++P++ + +L + +L+ GK
Sbjct: 286 GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK----MTTKNAVACTGLMVGY 186
Q+HSQ I++GF + L +MY+KC +EV ++ M + N V+ T L++G
Sbjct: 346 QIHSQTIKVGFEDSTDVGNALVDMYMKC---SASEVEASRVFGAMVSPNVVSWTTLILGL 402
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
D L +M+K V+ + S VL+AC+ L+ + +IH+Y ++ ++ E+
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
VG LVD Y+ + + A S++ ++ ++++++T + + G+ + AL +
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
G+ ++ A + + L G +H ++K G S ++++ MYSKCG L+ A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
+ F I PD ++W ++ A +G S A+ F +M P++VTF+ LL+ACS+
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
L G ++ M Y ++P ++HY ++G+ RAG L+EA ++ +M +P+ + +KT
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 702
Query: 486 LLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
LL C NL A K L P D A Y+ + +L+ +G + A + R +M E+ L
Sbjct: 703 LLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762
Query: 546 RKEV 549
K++
Sbjct: 763 SKKL 766
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 229/445 (51%), Gaps = 11/445 (2%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L +Y A ++FDEM R +F+W +ISA+ + A+ LF M+ G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P+ F +++ S A + G ++H +I+ GF + + ++LS++Y KCG A
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
+ + + ++ T ++ A + +AL +++M+K GV +EF F +L A + L +
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GL 240
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
G+ IHS + G+ V + T LVDFYS+ + E A + S E + F W+++++G+
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
++ R +A+ TF +RS G+ N+F Y+ I CSA+ L +G Q+H+ IK G
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST 360
Query: 348 SGESAMITMYSKCGKLDY-AYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLR 405
+A++ MY KC + A + F + P+ ++WT +I HG + L +M++
Sbjct: 361 DVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 406 SGVRPNAVTFIGLLNACS---HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
V PN VT G+L ACS H V E +L ++ VD + N ++ Y+ +
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL----LRRHVDGEMVVGNSLVDAYASSR 476
Query: 463 LLQEALEMIRSMPFEPDTLSWKTLL 487
+ A +IRSM D +++ +L+
Sbjct: 477 KVDYAWNVIRSMK-RRDNITYTSLV 500
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 256/516 (49%), Gaps = 9/516 (1%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
++ + + C L +S G H + + GN + + + +Y C F A +F +
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL 185
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
+ D SW +IS+ A++ +S M+ G+ P+ F LLG+ + LE GK
Sbjct: 186 QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGK 244
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
+HS +I G +V ++T+L + Y + ++ A N ++ T ++ G+ + L
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
R +A+ F +M G++ + F +S +L C+A++ ++ G+QIHS ++K+G E VG
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 251 PLVDFYSKCGRFEA-ACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
LVD Y KC E A + F ++ PN SW+ +I G G + + V
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
N + + +ACS + + ++HA +++ + + ++++ Y+ K+DYA+
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV 484
Query: 370 FLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
++++ D I +T+++ + GK E A+ + + M G+R + ++ G ++A ++ G +
Sbjct: 485 IRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL 544
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
+ GK L SVK G N ++ +YS+ G L++A ++ + PD +SW L+
Sbjct: 545 ETGKH-LHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVS 602
Query: 489 GCWSHRNLETA--SIAAGKIFHLDPLDSATYVTMFN 522
G S+ + +A + ++ +P DS T++ + +
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEP-DSVTFLILLS 637
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 208/398 (52%), Gaps = 6/398 (1%)
Query: 97 LFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYI 156
SR +LG S C + SF + ++ +G +H +I+ G ++ + L ++Y+
Sbjct: 13 FLSRTNELGNLQKS---CIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYL 69
Query: 157 KCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSI 216
K + A ++M+ + A T ++ +T++ AL LF +M+ G +EF FS
Sbjct: 70 KTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSS 129
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
V+++CA L+DI+ G ++H +K G E VG+ L D YSKCG+F+ AC+ F S++ +
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
SW+ +I+ + ++ +AL+ + + GV N F + + A S + L +G +H+
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHS 248
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-E 395
+ I +G+ + +++++ YS+ K++ A + + + D WT+++ + + ++ E
Sbjct: 249 NIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE 308
Query: 396 AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMI 455
AV F +M G++PN T+ +L+ CS + GKQ + S ++K G + + D N ++
Sbjct: 309 AVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQ-IHSQTIKVGFEDSTDVGNALV 367
Query: 456 GVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
+Y + + + P+ +SW TL+ G H
Sbjct: 368 DMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDH 405
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 255/518 (49%), Gaps = 35/518 (6%)
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI---KPSSSIFCTLLGSFA 121
++ + + ++FSW I ++E + + L+ +ML G +P + L A
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
D LG + ++++ + +M+ CG ++ A ++ ++ V+
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
L+ GY + A+ ++ M EGVK D+ ++ +C+ L D+N G++ + Y + G
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
L + + L+D +SKCG A + F+++ + SW+ +I+GY + G D + + F
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 302 NIRSKGVIL-------------------------------NSFVYTNIFQACSAISDLVY 330
++ K V+L + + ACS + L
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 331 GAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY 390
G +H K L ++ ++++ MY+KCG + A F I+ +++ +TAII A
Sbjct: 408 GIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 391 HGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
HG S A+ F++M+ +G+ P+ +TFIGLL+AC H G+++ G+ + M ++ ++P +
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLK 527
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL 509
HY+ M+ + RAGLL+EA ++ SMP E D W LL GC H N+E AA K+ L
Sbjct: 528 HYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
DP DS YV + ++ A W++A + R+MM ER + K
Sbjct: 588 DPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEK 625
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 259/531 (48%), Gaps = 35/531 (6%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
S+ + K CG++ L + H + + +GN ++ I+ +Y C+ + A RVFDE+
Sbjct: 164 SFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI 223
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
V+ SW I+ Y E G A+ +F +ML+L ++P + +++ + + ALE+GK
Sbjct: 224 VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGK 283
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK-------------------- 170
+H+ +++ AD + T++ +MY+KC L+ A ++
Sbjct: 284 VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSG 343
Query: 171 -----------MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
M +N V+ ++ GY A +AL M +E +D +L
Sbjct: 344 LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILN 403
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND-F 278
C+ + D+ G+Q H + + G ++ V V L+D Y KCG ++A F + E D
Sbjct: 404 VCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
SW+A++TG + GR ++AL F+ ++ + + + + C+ I L G +H
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQVEAKP-SKYTLATLLAGCANIPALNLGKAIHGFL 522
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAV 397
I+ G + AM+ MYSKC DYA + F D I W +II +G+S E
Sbjct: 523 IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVF 582
Query: 398 KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGV 457
+LF + GV+P+ VTF+G+L AC G V+ G Q+ SMS KY + P ++HY+CMI +
Sbjct: 583 ELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIEL 642
Query: 458 YSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH 508
Y + G L + E + MPF+P + C +R + + AA ++ +
Sbjct: 643 YCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMN 693
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 237/511 (46%), Gaps = 35/511 (6%)
Query: 13 YKHLFKMCGMLGALSDGKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAERVFDEMV 71
Y+ LF+ C + + + L + F+ N ++ Y C A +F+EM
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQ 131
+RD SW +I+A A+ G R+F RM G++ + + F +L S L L +Q
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
LH +++ G++ +V +ET++ ++Y KC + A +++ + V+ ++ Y +
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
+ +A+++F KM++ V+ S V+ AC+ + G+ IH+ +VKL + ++ V T
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF-----KNIRSK 306
+ D Y KC R E+A + F+ R + SW++ ++GY SG +A E F +NI S
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 307 GVILNSFVYTN--------------------------IFQACSAISDLVYGAQVHADAIK 340
+L +V+ + I CS ISD+ G Q H +
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 341 KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI-EKPDTIAWTAIICAYAYHGKSEAVKL 399
G + +A++ MY KCG L A F + E D ++W A++ A G+SE
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 400 FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
F + ++ +P+ T LL C++ + GK + ++ G + M+ +YS
Sbjct: 484 FFEGMQVEAKPSKYTLATLLAGCANIPALNLGKA-IHGFLIRDGYKIDVVIRGAMVDMYS 542
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
+ A+E+ + D + W +++ GC
Sbjct: 543 KCRCFDYAIEVFKEAATR-DLILWNSIIRGC 572
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 35/345 (10%)
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFES 271
+++ + ++C++ + R++ S+ V + + ++ Y KCG + A + FE
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 272 IREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
+ E + SW+A+IT Q+G D+ F+ + GV + + ++C I DL
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
Q+H +K G + E++++ +Y KC + A + F I P ++W I+ Y
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 392 G-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV------ 444
G EAV +F KML VRP T ++ ACS S ++ GK + +++VK V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGK-VIHAIAVKLSVVADTVV 300
Query: 445 ---------------------DPT----IDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
D T + + + Y+ +GL +EA E+ MP E +
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP-ERN 359
Query: 480 TLSWKTLLGG-CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNL 523
+SW +LGG +H E ++ +D+ T V + N+
Sbjct: 360 IVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
M + +ID + + +C + + GK H + R + N + N +L MY C +
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 60 FTAAERVFDEMVD-RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
+A F +M + RD SW +++ A G A+ F M + KPS TLL
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLA 504
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
A+ AL LGK +H LIR G+ DV I + +MY KC D A + T++ +
Sbjct: 505 GCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLIL 564
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQ-IHSYS 237
++ G + R + LF + EGVK D F +L+AC + G Q S S
Sbjct: 565 WNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMS 624
Query: 238 VKLGLESEVSVGTPLVDFYSKCG 260
K + +V +++ Y K G
Sbjct: 625 TKYHISPQVEHYDCMIELYCKYG 647
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 208/345 (60%), Gaps = 3/345 (0%)
Query: 204 KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFE 263
++G D + S +++C +D TG H ++K G S+V +G+ LV Y G E
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 264 AACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS 323
A + FE + E N SW+A+I+G+ Q R D L+ + +R N + +T + AC+
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 324 AISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
L G VH + GL YL +++I+MY KCG L A++ F D ++W +
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 384 IICAYAYHGKS-EAVKLFHKML-RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
+I YA HG + +A++LF M+ +SG +P+A+T++G+L++C H+GLVKEG++F + M+ +
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-E 351
Query: 442 YGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASI 501
+G+ P ++HY+C++ + R GLLQEALE+I +MP +P+++ W +LL C H ++ T
Sbjct: 352 HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR 411
Query: 502 AAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
AA + L+P +AT+V + NL+A G W EAA RK+M ++ L+
Sbjct: 412 AAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLK 456
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 129/266 (48%), Gaps = 2/266 (0%)
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
G H ++ GF +DV + ++L +Y G ++ A +M +N V+ T ++ G+ Q
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
R L L++KM K +++ F+ +L AC + GR +H ++ +GL+S + +
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI 258
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK-G 307
L+ Y KCG + A + F+ + SW+++I GY Q G +A+E F+ + K G
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
++ Y + +C + G + + GL L+ S ++ + + G L A
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 368 QAFLTIE-KPDTIAWTAIICAYAYHG 392
+ + KP+++ W +++ + HG
Sbjct: 379 ELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 3/281 (1%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAER 65
S D + CG+ G FH L+ + ++ + ++ +Y D A +
Sbjct: 117 SFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYK 176
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VF+EM +R++ SW +IS +A+E + ++L+S+M P+ F LL + A
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGA 236
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
L G+ +H Q + +G + + I +L +MY KCG L A ++ + K+ V+ ++ G
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 186 YTQALRHTDALLLFAKMI-KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
Y Q A+ LF M+ K G K D + VL +C + GR+ + + GL+
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESI-REPNDFSWSAII 284
E++ + LVD + G + A + E++ +PN W +++
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
++ +++ G +++ ++ ++C D G+ H A+K G + + S+++ +Y
Sbjct: 106 DSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY 165
Query: 358 SKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFI 416
G+++ AY+ F + + + ++WTA+I +A + + +KL+ KM +S PN TF
Sbjct: 166 RDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFT 225
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF 476
LL+AC+ SG + +G+ + ++ G+ + N +I +Y + G L++A +
Sbjct: 226 ALLSACTGSGALGQGRS-VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS- 283
Query: 477 EPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL------DPLDSATYVTMFNLHALAGNW 530
D +SW +++ G H ++ A ++F L D+ TY+ + + AG
Sbjct: 284 NKDVVSWNSMIAGYAQH----GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 339
Query: 531 DEAAQYRKMMAERNLRKEVS 550
E ++ +MAE L+ E++
Sbjct: 340 KEGRKFFNLMAEHGLKPELN 359
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 266/530 (50%), Gaps = 14/530 (2%)
Query: 18 KMCGMLGALSDGKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAERVFDEMVDRDLF 76
K+ L LSD K H + + N F+ N +LQ Y + F A+++FDEM R++
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 77 SWATIISAYAE-EGHMIGAIRL----FSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQ 131
+W +I + +G L SR+L + F L+ D + ++ G Q
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
LH +++ G + T+L + Y KCG + A + ++ V L+ Y
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 192 HTDALLLFAKM--IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
+A L M K + D F FS +L AC I G+QIH+ K+ + ++ V
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVA 279
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
T L++ Y+K A + FES+ N SW+A+I G+ Q+G +A+ F + + +
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
+ + ++ +C+ S + QV A KKG +LS +++I+ YS+ G L A
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 370 FLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F +I +PD ++WT++I A A HG E++++F ML+ ++P+ +TF+ +L+ACSH GLV
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLV 458
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
+EG + M+ Y ++ +HY C+I + RAG + EA +++ SMP EP T + G
Sbjct: 459 QEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
Query: 489 GCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRK 538
GC H E+ A K+ ++P Y + N + G+W++AA RK
Sbjct: 519 GCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK 568
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 239/451 (52%), Gaps = 33/451 (7%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
K++++ +I G + + T + + K +D A N+++ N ++ YT
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 190 LRHTDALLLFAKMIKEGVKL-DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
+ D + ++ +++++ +L D F F + K+CA+L G+Q+H + K G V
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKA------------ 296
L+D Y K A + F+ + E + SW+++++GY + G+ KA
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 297 -------------------LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
++ F+ ++ G+ + ++ +C+ + L G +H
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-A 396
A ++G ++ +A+I MYSKCG + A Q F +E D I+W+ +I YAYHG + A
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
++ F++M R+ V+PN +TF+GLL+ACSH G+ +EG ++ D M Y ++P I+HY C+I
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 457 VYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSAT 516
V +RAG L+ A+E+ ++MP +PD+ W +LL C + NL+ A +A + L+P D
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 517 YVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
YV + N++A G W++ ++ RKM+ N++K
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKK 477
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 163/373 (43%), Gaps = 43/373 (11%)
Query: 54 YCD-CKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK-PSSS 111
+CD + A R+F+++ + ++F + +II AY IR++ ++L + P
Sbjct: 51 FCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRF 110
Query: 112 IFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIK-------------- 157
F + S A + LGKQ+H L + G V E L +MY+K
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 158 -----------------CGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA 200
G + A+ + M K V+ T ++ GYT + +A+ F
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 201 KMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
+M G++ DE VL +CA L + G+ IH Y+ + G + V L++ YSKCG
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 261 RFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQ 320
A Q F + + SWS +I+GY G A+ETF ++ V N + +
Sbjct: 291 VISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLS 350
Query: 321 ACSAI----SDLVYGAQVHAD-AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE- 374
ACS + L Y + D I+ + Y +I + ++ GKL+ A + T+
Sbjct: 351 ACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY----GCLIDVLARAGKLERAVEITKTMPM 406
Query: 375 KPDTIAWTAIICA 387
KPD+ W +++ +
Sbjct: 407 KPDSKIWGSLLSS 419
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 161/359 (44%), Gaps = 48/359 (13%)
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAI 283
+K N ++I++ + GL + T +VDF K + A + F + PN F +++I
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSI 79
Query: 284 ITGYCQSGRFDKALETFKNIRSKGVIL-NSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
I Y + + + +K + K L + F + +F++C+++ G QVH K G
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK--------- 393
++ E+A+I MY K L A++ F + + D I+W +++ YA G+
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 394 -----------------------SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKE 430
EA+ F +M +G+ P+ ++ I +L +C+ G ++
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
GK ++ + + G N +I +YS+ G++ +A+++ M + D +SW T++ G
Sbjct: 260 GK-WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGY 317
Query: 491 WSHRNLETASIAAGKIFHLDPLDSA-------TYVTMFNLHALAGNWDEAAQYRKMMAE 542
H N A G I + + A T++ + + + G W E +Y MM +
Sbjct: 318 AYHGN------AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 138/325 (42%), Gaps = 38/325 (11%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKF---IDNCILQMYCDCKSFTAAER 65
D ++ +FK C LG+ GK H L + G +F +N ++ MY A +
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKF--GPRFHVVTENALIDMYMKFDDLVDAHK 165
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD---------------------- 103
VFDEM +RD+ SW +++S YA G M A LF MLD
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 104 ---------LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNM 154
GI+P ++L S A +LELGK +H R GF + L M
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 155 YIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
Y KCG + A +M K+ ++ + ++ GY A+ F +M + VK + F
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Query: 215 SIVLKACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR 273
+L AC+ + G R +E ++ L+D ++ G+ E A + +++
Sbjct: 346 LGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP 405
Query: 274 -EPNDFSWSAIITGYCQSGRFDKAL 297
+P+ W ++++ G D AL
Sbjct: 406 MKPDSKIWGSLLSSCRTPGNLDVAL 430
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/578 (26%), Positives = 275/578 (47%), Gaps = 76/578 (13%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
F+ + + MY C A +VFDE+ DR+ +W ++ Y + G AIRLFS M
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G++P+ T L + A+ +E GKQ H+ I G D + T+L N Y K G ++ A
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
E+ ++M K+ V ++ GY Q DA+ + M E +K D + ++ A A
Sbjct: 329 EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAART 388
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE---------- 274
+++ G+++ Y ++ ES++ + + ++D Y+KCG A + F+S E
Sbjct: 389 ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 448
Query: 275 -------------------------PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
PN +W+ II ++G+ D+A + F ++S G+I
Sbjct: 449 AAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII 508
Query: 310 LN-----------------------------------SFVYTNIFQACSAISDLVYGAQV 334
N +F T AC+ ++ L G +
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 335 HADAIKKGLVQY---LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
H I+ +Q+ +S E++++ MY+KCG ++ A + F + + A+I AYA +
Sbjct: 569 HGYIIRN--LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALY 626
Query: 392 GK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G EA+ L+ + G++P+ +T +L+AC+H+G + + + + K + P ++H
Sbjct: 627 GNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEH 686
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD 510
Y M+ + + AG ++AL +I MPF+PD ++L+ C R E + K+ +
Sbjct: 687 YGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESE 746
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
P +S YVT+ N +A+ G+WDE + R+MM + L+K+
Sbjct: 747 PENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKK 784
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 251/517 (48%), Gaps = 17/517 (3%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG-----NKFIDNCILQMYC 55
MD + I P Y + + C LS GK H R+ + NG N++I+ ++ Y
Sbjct: 61 MDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI--LKNGDFYARNEYIETKLVIFYA 118
Query: 56 DCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
C + AE +F ++ R++FSWA II G GA+ F ML+ I P + +
Sbjct: 119 KCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPN 178
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
+ + G+ +H +++ G V + ++L++MY KCG LD A +++ +N
Sbjct: 179 VCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRN 238
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
AVA LMVGY Q ++ +A+ LF+ M K+GV+ S L A A + + G+Q H+
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA 298
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
++ G+E + +GT L++FY K G E A F+ + E + +W+ II+GY Q G +
Sbjct: 299 IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVED 358
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMIT 355
A+ + +R + + + + A + +L G +V I+ + S ++
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMD 418
Query: 356 MYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVT 414
MY+KCG + A + F + + D I W ++ AYA G S EA++LF+ M GV PN +T
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 415 FIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
+ ++ + +G V E K M G+ P + + M+ + G +EA+ +R M
Sbjct: 479 WNLIILSLLRNGQVDEAKDMFLQMQ-SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Query: 475 P---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH 508
P+ S L C +H AS+ G+ H
Sbjct: 538 QESGLRPNAFSITVALSAC-AH----LASLHIGRTIH 569
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 233/508 (45%), Gaps = 49/508 (9%)
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG- 140
+S+ + G + A+ L + M ++ I+ +L L GKQ+H+++++ G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 141 -FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLF 199
+ + IET L Y KC L+ AEV +K+ +N + ++ + AL+ F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 200 AKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKC 259
+M++ + D FV V KAC ALK GR +H Y VK GLE V V + L D Y KC
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIF 319
G + A + F+ I + N +W+A++ GY Q+G+ ++A+ F ++R +GV +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 320 QACSAISDLVYGAQVHADAIKKGL-VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDT 378
A + + + G Q HA AI G+ + + G S ++ Y K G ++YA F + + D
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTS-LLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 379 IAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF--- 434
+ W II Y G E A+ + M ++ + VT L++A + + +K GK+
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY 400
Query: 435 ---------------LDSMSVKYG--------VDPTIDH----YNCMIGVYSRAGLLQEA 467
+ M K G D T++ +N ++ Y+ +GL EA
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 468 LEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETAS------IAAGKIFHLDPLDSATYV 518
L + M E P+ ++W ++ + ++ A ++G I +L ++
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL-----ISWT 515
Query: 519 TMFNLHALAGNWDEAAQYRKMMAERNLR 546
TM N G +EA + + M E LR
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLR 543
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
E P+ S+ ++ C++G +AL + + + + +Y I Q C DL
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 330 YGAQVHADAIKKG----LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
G Q+HA +K G +Y+ E+ ++ Y+KC L+ A F + + +W AII
Sbjct: 88 TGKQIHARILKNGDFYARNEYI--ETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 386 CAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
G E A+ F +ML + + P+ + AC + G+ + VK G+
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRG-VHGYVVKSGL 204
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ + + + +Y + G+L +A ++ +P + + ++W L+ G
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVG 248
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/506 (29%), Positives = 247/506 (48%), Gaps = 27/506 (5%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L Y A VFD M +++ SW ++SAY + M A LF + +
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL- 219
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
S C LLG F + +Q + DV T+ Y + G +D A
Sbjct: 220 --VSWNC-LLGGFVKKKKIVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKM-----IKEGVKLDEFVFSIVLKACA 222
++ ++ T ++ GY Q +A LF KM + L +V ++
Sbjct: 273 FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSA 282
L D+ R + +++ ++ Y++CG+ A F+ + + + SW+A
Sbjct: 333 ELFDVMPCRNVSTWNT-------------MITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
+I GY QSG +AL F + +G LN +++ C+ + L G Q+H +K G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFH 401
+A++ MY KCG ++ A F + D ++W +I Y+ HG E A++ F
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 402 KMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
M R G++P+ T + +L+ACSH+GLV +G+Q+ +M+ YGV P HY CM+ + RA
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 462 GLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMF 521
GLL++A ++++MPFEPD W TLLG H N E A AA KIF ++P +S YV +
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619
Query: 522 NLHALAGNWDEAAQYRKMMAERNLRK 547
NL+A +G W + + R M ++ ++K
Sbjct: 620 NLYASSGRWGDVGKLRVRMRDKGVKK 645
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 218/497 (43%), Gaps = 40/497 (8%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N + Y A RVF M S+ +IS Y G A +LF M + +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL- 126
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
S + G + + LGK +L I DV T+ + Y + G +D A
Sbjct: 127 --VSWNVMIKGYVRNRN---LGKA--RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
++M KN V+ L+ Y Q + +A +LF +E L ++ +L K I
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS--RENWAL--VSWNCLLGGFVKKKKI 235
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
RQ + + VS T ++ Y++ G+ + A Q F+ + F+W+A+++GY
Sbjct: 236 VEARQFFD---SMNVRDVVSWNT-IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGY 291
Query: 288 CQSGRFDKALETF-----KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
Q+ ++A E F +N S +L +V + + D++ V
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV-------- 343
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFH 401
S + MIT Y++CGK+ A F + K D ++W A+I Y+ G S EA++LF
Sbjct: 344 -----STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 402 KMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
+M R G R N +F L+ C+ ++ GKQ L VK G + N ++ +Y +
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQ-LHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 462 GLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA--SIAAGKIFHLDPLDSATYVT 519
G ++EA ++ + M + D +SW T++ G H E A + K L P D AT V
Sbjct: 458 GSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKP-DDATMVA 515
Query: 520 MFNLHALAGNWDEAAQY 536
+ + + G D+ QY
Sbjct: 516 VLSACSHTGLVDKGRQY 532
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 166/377 (44%), Gaps = 38/377 (10%)
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
S + ++ K L++ G +D+ + Y++ G + A +M ++V+
Sbjct: 39 SLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS 97
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
G++ GY LR+ + L K+ E + D +++++K +++ R++
Sbjct: 98 YNGMISGY---LRNGE-FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAREL----F 149
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
++ E +V ++ Y++ G + A F+ + E ND SW+A+++ Y Q+ + ++A
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 299 TFKN-----IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
FK+ + S +L FV +V Q + +V + + +
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKK---------KKIVEARQFFDSMNVRDVVSW----NTI 256
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNA 412
IT Y++ GK+D A Q F D WTA++ Y + EA +LF KM N
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NE 312
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
V++ +L ++ K+ D M + + +N MI Y++ G + EA +
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 473 SMPFEPDTLSWKTLLGG 489
MP + D +SW ++ G
Sbjct: 368 KMP-KRDPVSWAAMIAG 383
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
M+ ++ S+ C + AL GK H RL + F+ N +L MYC C S
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A +F EM +D+ SW T+I+ Y+ G A+R F M G+KP + +L +
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 120 FADPSALELGKQ-LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+ ++ G+Q ++ G + + ++ + G L+ A M + A
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 179 CTGLMVGYTQALRHTD 194
G ++G ++ +T+
Sbjct: 580 IWGTLLGASRVHGNTE 595
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 237/439 (53%), Gaps = 13/439 (2%)
Query: 115 TLLGSFADPSALELGKQLHSQLI-----RIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
+L+ + ++EL + LH +++ R GF D L Y++ G AE +
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGD-----QLVGCYLRLGHDVCAEKLFD 90
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI--KEGVKLDEFVFSIVLKACAALKDI 227
+M ++ V+ L+ GY+ + ++M+ + G + +E F ++ AC
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
GR IH +K G+ EV V +++Y K G ++C+ FE + N SW+ +I +
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
Q+G +K L F R G + + + ++C + + +H + G
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNK 270
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRS 406
+A++ +YSK G+L+ + F I PD++AWTA++ AYA HG +A+K F M+
Sbjct: 271 CITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHY 330
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G+ P+ VTF LLNACSHSGLV+EGK + ++MS +Y +DP +DHY+CM+ + R+GLLQ+
Sbjct: 331 GISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQD 390
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHAL 526
A +I+ MP EP + W LLG C +++ + + AA ++F L+P D YV + N+++
Sbjct: 391 AYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSA 450
Query: 527 AGNWDEAAQYRKMMAERNL 545
+G W +A++ R +M ++ L
Sbjct: 451 SGLWKDASRIRNLMKQKGL 469
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 185/407 (45%), Gaps = 16/407 (3%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-- 102
FI + ++ Y AE++FDEM +RDL SW ++IS Y+ G++ + SRM+
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
++G +P+ F +++ + + E G+ +H +++ G +V + N Y K G L
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
+ ++ KN V+ ++V + Q L F + G + D+ F VL++C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSA 282
+ + + IH + G + T L+D YSK GR E + F I P+ +W+A
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK- 341
++ Y G A++ F+ + G+ + +T++ ACS S LV + + + + K
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSH-SGLVEEGKHYFETMSKR 365
Query: 342 -GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYH-----GKS 394
+ L S M+ + + G L AY + +P + W A++ A + G
Sbjct: 366 YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 425
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
A +LF R G ++ L N S SGL K+ + + M K
Sbjct: 426 AAERLFELEPRDG-----RNYVMLSNIYSASGLWKDASRIRNLMKQK 467
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 150/342 (43%), Gaps = 13/342 (3%)
Query: 209 LDEFVFSIV--LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC 266
LD V S++ +K+C + I R +H VK +G LV Y + G A
Sbjct: 30 LDANVSSLIAAVKSCVS---IELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAE 86
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN--IRSKGVILNSFVYTNIFQACSA 324
+ F+ + E + SW+++I+GY G K E I G N + ++ AC
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 325 ISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAI 384
G +H +K G+++ + +A I Y K G L + + F + + ++W +
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 385 ICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYG 443
I + +G +E + F+ R G P+ TF+ +L +C G+V+ Q + + + G
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA-QGIHGLIMFGG 265
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAA 503
++ +YS+ G L+++ + + PD+++W +L +H A
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 504 GKIFH--LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
+ H + P D T+ + N + +G +E Y + M++R
Sbjct: 325 ELMVHYGISP-DHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 41 NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSR 100
+GNK I +L +Y + VF E+ D +W +++AYA G AI+ F
Sbjct: 267 SGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 101 MLDLGIKPSSSIFCTLLGSFADPSALELGKQ 131
M+ GI P F LL + + +E GK
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 250/499 (50%), Gaps = 14/499 (2%)
Query: 54 YCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSI- 112
Y A +FDEM RD+ SW ++IS E G M A++LF M P S+
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVV 129
Query: 113 -FCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM 171
+ ++ ++ ++L Q+ D + ++ + Y++ G +D A +M
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Query: 172 TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
KN ++ T ++ G Q R +AL LF M++ +K F+ V+ ACA + G
Sbjct: 186 PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSG 291
Q+H +KLG E V L+ FY+ C R + + F+ W+A+++GY +
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
+ + AL F + ++ N + + +CSA+ L +G ++H A+K GL +
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRP 410
+++ MYS G ++ A F+ I K ++W +II A HG+ + A +F +M+R P
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 411 NAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYG-VDPTIDHYNCMIGVYSRAGLLQEALE 469
+ +TF GLL+ACSH G +++G++ MS +D I HY CM+ + R G L+EA E
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 470 MIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGN 529
+I M +P+ + W LL C H +++ AA IF+LD SA YV + N++A AG
Sbjct: 486 LIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGR 545
Query: 530 WDEAAQYRKMMAERNLRKE 548
W ++ R M + + K+
Sbjct: 546 WSNVSKLRVKMKKNGIMKK 564
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 171/366 (46%), Gaps = 16/366 (4%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N ++ Y A ++F +M +++ SW T+I + A+ LF ML IK
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
+S F ++ + A+ A +G Q+H +I++GF + + +L Y C + +
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
++ + T L+ GY+ +H DAL +F+ M++ + ++ F+ L +C+AL +
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
+ G+++H +VKLGLE++ VG LV YS G A F I + + SW++II G
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGC 402
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH------ADAIKK 341
Q GR A F + + +T + ACS L G ++ + I +
Sbjct: 403 AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDR 462
Query: 342 GLVQYLSGESAMITMYSKCGKLDYAYQAF-LTIEKPDTIAWTAIICAYAYH-----GKSE 395
+ Y + M+ + +CGKL A + + KP+ + W A++ A H G+
Sbjct: 463 KIQHY----TCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKA 518
Query: 396 AVKLFH 401
A +F+
Sbjct: 519 AAAIFN 524
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 176/378 (46%), Gaps = 34/378 (8%)
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA 220
+D A N++ + + T ++ GYT++ R DAL LF +M D ++ ++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMISG 106
Query: 221 CAALKDINTG---------RQIHSYSV---------KLGLESEVSVGTPLVDF------- 255
C D+NT R + S++ K+ + P+ D
Sbjct: 107 CVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMV 166
Query: 256 --YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
Y + G+ + A + F+ + N SW+ +I G Q+ R +AL+ FKN+ + S
Sbjct: 167 HGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSR 226
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI 373
+T + AC+ G QVH IK G + +++IT Y+ C ++ + + F
Sbjct: 227 PFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEK 286
Query: 374 EKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
WTA++ Y+ + K E A+ +F MLR+ + PN TF LN+CS G + GK
Sbjct: 287 VHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWS 492
+ + ++VK G++ N ++ +YS +G + +A+ + + F+ +SW +++ GC
Sbjct: 347 E-MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQ 404
Query: 493 HRNLETASIAAGKIFHLD 510
H + A + G++ L+
Sbjct: 405 HGRGKWAFVIFGQMIRLN 422
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 7/313 (2%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKS 59
M CI R + + C A G H + ++ +++ ++ Y +CK
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
+ +VFDE V + W ++S Y+ A+ +FS ML I P+ S F + L S
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+ L+ GK++H +++G D + +L MY G ++ A K+ K+ V+
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY--S 237
++VG Q R A ++F +MI+ + DE F+ +L AC+ + GR++ Y S
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFES-IREPNDFSWSAIITG---YCQSGRF 293
++ ++ T +VD +CG+ + A + E + +PN+ W A+++ + R
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRG 515
Query: 294 DKALETFKNIRSK 306
+KA N+ SK
Sbjct: 516 EKAAAAIFNLDSK 528
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 241/437 (55%), Gaps = 8/437 (1%)
Query: 112 IFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM 171
IF +LL + A++ G ++H + ++ I + L +Y CG+ + A ++M
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 172 TTKNA--VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+ +++ A L+ GY + ++ DA+ L+ +M ++GVK D F F VLKAC + +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
G IH VK G +V V LV Y+KCG A F+ I + SW++++TGY
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG 349
G +AL+ F+ + G+ + +++ + + +G Q+H I++G+ LS
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 350 ESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVR 409
+A+I +YSK G+L A F + + DT++W AII A++ S +K F +M R+ +
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS--KNSNGLKYFEQMHRANAK 388
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
P+ +TF+ +L+ C+++G+V++G++ MS +YG+DP ++HY CM+ +Y RAG+++EA
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 470 MI-RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAG 528
MI + M E W LL C+ H N + +AA ++F L+P + + + +++ A
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 529 NWDEAAQYRKMMAERNL 545
++ + R+MM +R L
Sbjct: 509 RAEDVERVRQMMVDRGL 525
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 193/394 (48%), Gaps = 14/394 (3%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQR-MANGNKFIDNCILQMYCDCKSFTAAERVF 67
+P + L + C L A+ G H+ + + N I + ++++Y C A VF
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 68 DEMVDRD--LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
D M RD F+W ++IS YAE G A+ L+ +M + G+KP F +L + +
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
+++G+ +H L++ GF DV + L MY KCG + A + + K+ V+ ++ G
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTG 270
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
Y +AL +F M++ G++ D+ S VL + K GRQ+H + ++ G+E E
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWE 327
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
+SV L+ YSK G+ AC F+ + E + SW+AII+ + ++ L+ F+ +
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHR 384
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYLSGESAMITMYSKCGKLD 364
+ + ++ C+ + G ++ + K+ G+ + + M+ +Y + G ++
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 365 YAYQAFLT---IEKPDTIAWTAIICAYAYHGKSE 395
AY + +E T+ W A++ A HG ++
Sbjct: 445 EAYSMIVQEMGLEAGPTV-WGALLYACYLHGNTD 477
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/556 (28%), Positives = 263/556 (47%), Gaps = 70/556 (12%)
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
+A +VFD M + D +W T++++Y+ G AI LF+++ KP F +L + A
Sbjct: 22 SARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCA 81
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM--TTKNAVAC 179
++ G+++ S +IR GF A + + +L +MY KC A M ++N V
Sbjct: 82 SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTW 141
Query: 180 TGLMVGYTQALRHTDA-------------------------------LLLFAKMIKEGVK 208
L+ Y A + A L LF +M++ K
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK 201
Query: 209 LDEFVFSIVLKACAA-LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
D + FS ++ AC+A ++ GR +H+ +K G S V ++ FY+K G + A +
Sbjct: 202 PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 268 AFESIR-------------------------------EPNDFSWSAIITGYCQSGRFDKA 296
ESI E N +W+ +ITGY ++G ++A
Sbjct: 262 ELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQA 321
Query: 297 LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITM 356
L F + GV + F Y + ACS ++ L +G +H I G Y +A++ +
Sbjct: 322 LRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNL 381
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTF 415
Y+KCG + A +AF I D ++W ++ A+ HG +A+KL+ M+ SG++P+ VTF
Sbjct: 382 YAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTF 441
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRS-- 473
IGLL CSHSGLV+EG +SM Y + +DH CMI ++ R G L EA ++ +
Sbjct: 442 IGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYS 501
Query: 474 --MPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWD 531
+ + SW+TLLG C +H + E + + +P + ++V + NL+ G W
Sbjct: 502 SLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWK 561
Query: 532 EAAQYRKMMAERNLRK 547
E R+ M ER ++K
Sbjct: 562 EGEDVRREMVERGMKK 577
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 217/516 (42%), Gaps = 83/516 (16%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKF-----IDNCILQMYCDC------ 57
D S+ + C LG + G+ ++Q + + F ++N ++ MY C
Sbjct: 69 DDYSFTAILSTCASLGNVKFGR----KIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 58 ---------------------------KSFTAAERVFDEMVDRDLFSWATIISAYAEEGH 90
+ F AA VF EM R F+W +IS +A G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 91 MIGAIRLFSRMLDLGIKPSSSIFCTLLGS-FADPSALELGKQLHSQLIRIGFTADVSIET 149
+ + LF ML+ KP F +L+ + AD S + G+ +H+ +++ G+++ V +
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 150 TLSNMYIKCGWLDGA-----------EVATNKM--------------------TTKNAVA 178
++ + Y K G D A +V+ N + KN V
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
T ++ GY + AL F +M+K GV D F + VL AC+ L + G+ IH +
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
G + VG LV+ Y+KCG + A +AF I + SW+ ++ + G D+AL+
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESAMITMY 357
+ N+ + G+ ++ + + CS + G + +K + + + MI M+
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 358 SKCGKLDYA------YQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPN 411
+ G L A Y + +T + + +W ++ A + H +E + K+L+
Sbjct: 485 GRGGHLAEAKDLATTYSSLVT-DSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSE 543
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPT 447
++F+ L N +G KEG+ M V+ G+ T
Sbjct: 544 EMSFVLLSNLYCSTGRWKEGEDVRREM-VERGMKKT 578
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 173/397 (43%), Gaps = 68/397 (17%)
Query: 157 KCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSI 216
K G + A + M + VA ++ Y++ H +A+ LF ++ K D++ F+
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG---------------- 260
+L CA+L ++ GR+I S ++ G + + V L+D Y KC
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 261 -----------------RFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
+FEAA F + + F+W+ +I+G+ G+ + L FK +
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 304 RSKGVILNSFVYTNIFQACSA-ISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+ + ++++ ACSA S++VYG VHA +K G + ++++++ Y+K G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 363 LDYAYQAFLTIE-------------------------------KPDTIAWTAIICAYAYH 391
D A + +IE + + + WT +I Y +
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 392 GKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G E A++ F +M++SGV + + +L+ACS L+ GK + + G
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-IHCGFQGYAYV 374
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
N ++ +Y++ G ++EA + D +SW T+L
Sbjct: 375 GNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTML 410
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 40/315 (12%)
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
+K GR +A Q F+ + E + +W+ ++T Y + G +A+ F +R + + +T
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 317 NIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG--------------- 361
I C+++ ++ +G ++ + I+ G L +++I MY KC
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 362 ------------------KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEA-VKLFHK 402
+ + A F+ + K AW +I +A+ GK E+ + LF +
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 403 MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
ML S +P+ TF L+NACS + + ++ +K G ++ N ++ Y++ G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 463 LLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDS-ATYVTMF 521
+A+ + S+ +SW +++ C E A ++FHL P + T+ TM
Sbjct: 255 SRDDAMRELESIEVLTQ-VSWNSIIDACMKIGETEKAL----EVFHLAPEKNIVTWTTMI 309
Query: 522 NLHALAGNWDEAAQY 536
+ G+ ++A ++
Sbjct: 310 TGYGRNGDGEQALRF 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 11/266 (4%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
M ++ + D +Y + C L L GK+ H L G ++ N ++ +Y C
Sbjct: 328 MMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGD 387
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A+R F ++ ++DL SW T++ A+ G A++L+ M+ GIKP + F LL +
Sbjct: 388 IKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTT 447
Query: 120 FADPSALELGKQLHSQLIR-IGFTADVSIETTLSNMYIKCGWL----DGAEVATNKMTTK 174
+ +E G + +++ +V T + +M+ + G L D A ++ +T
Sbjct: 448 CSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDS 507
Query: 175 NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIH 234
+ + ++G HT+ +K++K +E F ++ + G +
Sbjct: 508 SNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVR 567
Query: 235 SYSVKLGLE-----SEVSVGTPLVDF 255
V+ G++ S + VG + F
Sbjct: 568 REMVERGMKKTPGCSWIEVGNQVSTF 593
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 351 SAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVR 409
++ I +K G++ A Q F + + DT+AW ++ +Y+ G EA+ LF ++ S +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
P+ +F +L+ C+ G VK G++ + S+ ++ G ++ N +I +Y + A +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRK-IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 470 MIRSMPFEP-DTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAG 528
+ R M + + ++W +LL +++ N E A + + + M + HA G
Sbjct: 127 VFRDMCCDSRNEVTWCSLL---FAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 529 NWDEAAQYRKMMAERNLRKE 548
+ K M E + +
Sbjct: 184 KLESCLSLFKEMLESEFKPD 203
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 230/459 (50%), Gaps = 35/459 (7%)
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC---GWLDGAEVATNKMTTKNAVACT 180
S E KQ+H+++++ G D T + I +L A++ + +
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++ G++ + +LLL+ +M+ + + F +LKAC+ L QIH+ KL
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
G E++V L++ Y+ G F+ A F+ I EP+D SW+++I GY ++G+ D AL F
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 301 KNIRSKGVI-----LNSFV--------------------------YTNIFQACSAISDLV 329
+ + K I ++ +V N AC+ + L
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYA 389
G +H+ K + +I MY+KCG+++ A + F I+K AWTA+I YA
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 390 YHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTI 448
YHG EA+ F +M + G++PN +TF +L ACS++GLV+EGK SM Y + PTI
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 449 DHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH 508
+HY C++ + RAGLL EA I+ MP +P+ + W LL C H+N+E +
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 509 LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+DP YV N+HA+ WD+AA+ R++M E+ + K
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 175/389 (44%), Gaps = 43/389 (11%)
Query: 44 KFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
KF+ CI D + A+ VFD D F W +I ++ ++ L+ RML
Sbjct: 51 KFLSFCISSTSSDFLPY--AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLC 108
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMY-------- 155
++ F +LL + ++ SA E Q+H+Q+ ++G+ DV +L N Y
Sbjct: 109 SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 168
Query: 156 -----------------------IKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRH 192
+K G +D A KM KNA++ T ++ GY QA +
Sbjct: 169 AHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMN 228
Query: 193 TDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPL 252
+AL LF +M V+ D + L ACA L + G+ IHSY K + + +G L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
+D Y+KCG E A + F++I++ + +W+A+I+GY G +A+ F ++ G+ N
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 313 FVYTNIFQACSAI-----SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+T + ACS L++ + +K + Y ++ + + G LD A
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY----GCIVDLLGRAGLLDEAK 404
Query: 368 QAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
+ + KP+ + W A++ A H E
Sbjct: 405 RFIQEMPLKPNAVIWGALLKACRIHKNIE 433
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 143/315 (45%), Gaps = 48/315 (15%)
Query: 218 LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDF--YSKCGRFEAACQ-AFESIRE 274
L+ C+ +++ +QIH+ +K GL + T + F S F Q F+
Sbjct: 21 LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P+ F W+ +I G+ S +++L ++ + N++ + ++ +ACS +S Q+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK- 393
HA K G + +++I Y+ G A+ F I +PD ++W ++I Y GK
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 394 -------------------------------SEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
EA++LFH+M S V P+ V+ L+AC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 423 SHSGLVKEGK---QFLDSMSVKYGVDPTIDHYNC-MIGVYSRAGLLQEALEMIRSMPFEP 478
+ G +++GK +L+ ++ +D + C +I +Y++ G ++EALE+ +++ +
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIR--MDSVL---GCVLIDMYAKCGEMEEALEVFKNIK-KK 311
Query: 479 DTLSWKTLLGGCWSH 493
+W L+ G H
Sbjct: 312 SVQAWTALISGYAYH 326
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 6/276 (2%)
Query: 30 KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEG 89
KL H R+ + N +++ Y A +F +M +++ SW T+IS Y +
Sbjct: 167 KLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQAD 226
Query: 90 HMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIET 149
A++LF M + ++P + L + A ALE GK +HS L + D +
Sbjct: 227 MNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC 286
Query: 150 TLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
L +MY KCG ++ A + K+ A T L+ GY +A+ F +M K G+K
Sbjct: 287 VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 346
Query: 210 DEFVFSIVLKACAALKDINTGRQI-HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA 268
+ F+ VL AC+ + G+ I +S L+ + +VD + G + A +
Sbjct: 347 NVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
Query: 269 FESIR-EPNDFSWSAIITGYCQSGRFDKALETFKNI 303
+ + +PN W A++ ++ R K +E + I
Sbjct: 407 IQEMPLKPNAVIWGALL----KACRIHKNIELGEEI 438
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 100/245 (40%), Gaps = 30/245 (12%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCIL-QMYCDCKS 59
M + + D S + C LGAL GK H+ L + + C+L MY C
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A VF + + + +W +IS YA GH AI F M +GIKP+ F +L +
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLS------NMYIKCGWLDGAEVATNKMTT 173
+ +E GK LI D +++ T+ ++ + G LD A+ +M
Sbjct: 358 CSYTGLVEEGK-----LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL 412
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
K G LL A I + ++L E + I++ A+ + GR +
Sbjct: 413 KPNAVIWG--------------ALLKACRIHKNIELGEEIGEILI----AIDPYHGGRYV 454
Query: 234 HSYSV 238
H ++
Sbjct: 455 HKANI 459
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 270/520 (51%), Gaps = 12/520 (2%)
Query: 36 LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAI 95
L+ A+ + + N ++ MY A +VFDEM+ RD S+ +II++ ++G + A+
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 96 RLFSRMLDLGIKPSSSIFCTLLGSFAD-PSALELGKQLHS-QLIRIGFTADVSIETTLSN 153
+L M G P S + +LL S+ ++ + H+ L+ V + T L +
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 154 MYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFV 213
MY+K A ++M KN V+ T ++ G + + LF M +E ++ +
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 214 FSIVLKACAALKDINTG----RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF 269
VL AC ++N G ++IH +S + G ++ + + Y +CG + F
Sbjct: 254 LLSVLPACV---ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLF 310
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
E+ + + WS++I+GY ++G + + +R +G+ NS I AC+ + L
Sbjct: 311 ETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS 370
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYA 389
+ + VH+ +K G + ++ +A+I MY+KCG L A + F + + D ++W+++I AY
Sbjct: 371 FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYG 430
Query: 390 YHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTI 448
HG SEA+++F M++ G + + F+ +L+AC+H+GLV+E Q + + + KY + T+
Sbjct: 431 LHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEA-QTIFTQAGKYHMPVTL 489
Query: 449 DHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA-SIAAGKIF 507
+HY C I + R G + +A E+ +MP +P W +LL C +H L+ A I A ++
Sbjct: 490 EHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELM 549
Query: 508 HLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+P + A YV + +H +GN+ A + R++M R L K
Sbjct: 550 KSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNK 589
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 190/424 (44%), Gaps = 20/424 (4%)
Query: 16 LFKMCGMLGALSD-GKLFHNRL---QRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMV 71
L +C +G+ S ++FH + +RM + + ++ MY AA VFD+M
Sbjct: 154 LLALCTRMGSSSKVARMFHALVLVDERMQE-SVLLSTALVDMYLKFDDHAAAFHVFDQME 212
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELG-- 129
++ SW +IS + + LF M ++P+ ++L P+ +EL
Sbjct: 213 VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVL-----PACVELNYG 267
Query: 130 ----KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
K++H R G AD + MY +CG + + V ++ V + ++ G
Sbjct: 268 SSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISG 327
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
Y + ++ + L +M KEG++ + ++ AC ++ +HS +K G S
Sbjct: 328 YAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSH 387
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
+ +G L+D Y+KCG AA + F + E + SWS++I Y G +ALE FK +
Sbjct: 388 ILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQ-VHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
G ++ + I AC+ + LV AQ + A K + L + I + + GK+D
Sbjct: 448 GGHEVDDMAFLAILSACNH-AGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKID 506
Query: 365 YAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNAC 422
A++ + + KP W++++ A HG+ + A K+ L N ++ L
Sbjct: 507 DAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIH 566
Query: 423 SHSG 426
+ SG
Sbjct: 567 TESG 570
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 206/455 (45%), Gaps = 25/455 (5%)
Query: 94 AIRLFS-RMLDLGIKPSSSIFCTLLGSFA-DPSALELGKQLHSQLIRIGFTADVSIETTL 151
A+RL+ ++ LG ++I +++ + A LG QLH ++ G D + +L
Sbjct: 29 ALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSL 88
Query: 152 SNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA-KMIKEG---- 206
+MY K ++M ++ V+ ++ Q D LL A K+IKE
Sbjct: 89 ISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ-----DGLLYEAMKLIKEMYFYG 143
Query: 207 -VKLDEFVFSIVLKACAALKDINTGRQIHSYS-VKLGLESEVSVGTPLVDFYSKCGRFEA 264
+ E V S++ R H+ V ++ V + T LVD Y K A
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA 203
Query: 265 ACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSA 324
A F+ + N+ SW+A+I+G + ++ ++ F+ ++ + + N ++ AC
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC-- 261
Query: 325 ISDLVYGA----QVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIA 380
+L YG+ ++H + + G +A +TMY +CG + + F T + D +
Sbjct: 262 -VELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM 320
Query: 381 WTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMS 439
W+++I YA G SE + L ++M + G+ N+VT + +++AC++S L+ + S
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST-VHSQI 379
Query: 440 VKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH-RNLET 498
+K G I N +I +Y++ G L A E+ + E D +SW +++ H E
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGHGSEA 438
Query: 499 ASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA 533
I G I +D ++ + + AG +EA
Sbjct: 439 LEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEA 473
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 241/488 (49%), Gaps = 42/488 (8%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG-IKPSSSIFCTLLGSFA 121
A R+ + D F + T++ Y+E ++ +F M+ G + P S F ++ +
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+ +L G Q+H Q ++ G + + + TTL MY CG ++ A ++M N VA
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA--- 174
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ V+ AC D+ R+I K+
Sbjct: 175 --------------------------------WNAVITACFRGNDVAGAREIFD---KML 199
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
+ + S L Y K G E+A + F + +D SWS +I G +G F+++ F+
Sbjct: 200 VRNHTSWNVMLAG-YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFR 258
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
++ G+ N T + ACS +G +H K G +S +A+I MYS+CG
Sbjct: 259 ELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 362 KLDYAYQAFLTI-EKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLL 419
+ A F + EK ++WT++I A HG+ EAV+LF++M GV P+ ++FI LL
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLL 378
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
+ACSH+GL++EG+ + M Y ++P I+HY CM+ +Y R+G LQ+A + I MP P
Sbjct: 379 HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPT 438
Query: 480 TLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
+ W+TLLG C SH N+E A ++ LDP +S V + N +A AG W + A RK
Sbjct: 439 AIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKS 498
Query: 540 MAERNLRK 547
M + ++K
Sbjct: 499 MIVQRIKK 506
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 10/249 (4%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L Y +A+R+F EM RD SW+T+I A G + F + G+
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P+ +L + + + E GK LH + + G++ VS+ L +MY +CG + A +
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 168 TNKMTTKNA-VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKD 226
M K V+ T ++ G + +A+ LF +M GV D F +L AC+
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 227 INTGRQIHSYSVKL-GLESEVSVGTPLVDFYSKCGRFEAA----CQAFESIREPNDFSWS 281
I G S ++ +E E+ +VD Y + G+ + A CQ P W
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQM---PIPPTAIVWR 443
Query: 282 AIITGYCQS 290
++ G C S
Sbjct: 444 TLL-GACSS 451
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 116/282 (41%), Gaps = 47/282 (16%)
Query: 215 SIVLKACAAL----KDINTGRQIHSYSVKLGLESEVSVGTPLVDF--YSKCGRFEAACQA 268
+I + C +L K++ QIH +K G++++ L+ S A +
Sbjct: 2 TIAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRL 61
Query: 269 FESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL-NSFVYTNIFQACSAISD 327
EP+ F ++ ++ GY +S ++ F + KG + +SF + + +A
Sbjct: 62 LLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRS 121
Query: 328 LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
L G Q+H A+K GL +L + +I MY CG +++A + F + +P+ +AW A+I
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI-- 179
Query: 388 YAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPT 447
AC V ++ D M V+
Sbjct: 180 --------------------------------TACFRGNDVAGAREIFDKMLVRNHTS-- 205
Query: 448 IDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+N M+ Y +AG L+ A + MP D +SW T++ G
Sbjct: 206 ---WNVMLAGYIKAGELESAKRIFSEMPHR-DDVSWSTMIVG 243
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFI---DNCILQMYCDC 57
+ A +S + S + C G+ GK+ H +++ G +I +N ++ MY C
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA--GYSWIVSVNNALIDMYSRC 317
Query: 58 KSFTAAERVFDEMVD-RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTL 116
+ A VF+ M + R + SW ++I+ A G A+RLF+ M G+ P F +L
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 117 LGSFADPSALELGKQLHSQLIRI 139
L + + +E G+ S++ R+
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRV 400
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 257/550 (46%), Gaps = 54/550 (9%)
Query: 4 ACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCIL--QMYCDCKSFT 61
A +S+ P + K + K C S KL + L M +C L Q C SF
Sbjct: 767 ASLSLAPPNLKKIIKQC------STPKLLESALAAMIK-TSLNQDCRLMNQFITACTSFK 819
Query: 62 A---AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
A +M + ++F + + + H I ++ L+ RML + PSS + +L+
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 879
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
A A G+ L + + + GF V I+TTL + Y G + A ++M ++ +A
Sbjct: 880 --ASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIA 937
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
T ++ Y + L A L +M
Sbjct: 938 WTTMVSAYRRVLDMDSANSLANQMS----------------------------------- 962
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
E + L++ Y G E A F + + SW+ +I GY Q+ R+ +A+
Sbjct: 963 ----EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIA 1018
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
F + +G+I + + + AC+ + L G +VH ++ G V + SA++ MYS
Sbjct: 1019 VFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYS 1078
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIG 417
KCG L+ A F + K + W +II A HG EA+K+F KM V+PNAVTF+
Sbjct: 1079 KCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVS 1138
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
+ AC+H+GLV EG++ SM Y + ++HY M+ ++S+AGL+ EALE+I +M FE
Sbjct: 1139 VFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE 1198
Query: 478 PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYR 537
P+ + W LL GC H+NL A IA K+ L+P++S Y + +++A W + A+ R
Sbjct: 1199 PNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIR 1258
Query: 538 KMMAERNLRK 547
M E + K
Sbjct: 1259 GRMRELGIEK 1268
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 243/488 (49%), Gaps = 32/488 (6%)
Query: 93 GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
I + R+ +G + F +L + + SAL G +LH +I D +ET
Sbjct: 94 ATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFM 153
Query: 153 NMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEF 212
+MY CG ++ A ++M+ ++ V ++ Y + +A LF +M V DE
Sbjct: 154 DMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEM 213
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
+ ++ AC ++ R I+ + ++ + + + T LV Y+ G + A + F +
Sbjct: 214 ILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI-----LNSFVYTN---------- 317
N F +A+++GY + GR D A F K ++ ++++V ++
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 318 ----------------IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ AC+ + L VH+ GL LS +A+I MY+KCG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLN 420
LD F + + + ++W+++I A + HG+ S+A+ LF +M + V PN VTF+G+L
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
CSHSGLV+EGK+ SM+ +Y + P ++HY CM+ ++ RA LL+EALE+I SMP +
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
+ W +L+ C H LE AA +I L+P V M N++A W++ R++M
Sbjct: 514 VIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVM 573
Query: 541 AERNLRKE 548
E+N+ KE
Sbjct: 574 EEKNVFKE 581
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 180/431 (41%), Gaps = 34/431 (7%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERV 66
+D S+ + K + AL +G H ++A + F++ + MY C A V
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
FDEM RD+ +W T+I Y G + A +LF M D + P I C ++ + +
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYI------------------------------ 156
+ ++ LI D + T L MY
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 157 -KCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFS 215
KCG LD A+V ++ K+ V T ++ Y ++ +AL +F +M G+K D
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 216 IVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
V+ ACA L ++ + +HS GLESE+S+ L++ Y+KCG +A FE +
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N SWS++I G AL F ++ + V N + + CS + G ++
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 336 ADAIKK-GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGK 393
A + + L M+ ++ + L A + ++ + + W +++ A HG+
Sbjct: 469 ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
Query: 394 SEAVKLFHKML 404
E K K +
Sbjct: 529 LELGKFAAKRI 539
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 261/547 (47%), Gaps = 42/547 (7%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
+ F+ + ++ Y F A VFDE+ R+ FS+ ++ AY A LF +
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 103 -------DLGIKPSSSIFCTL--LGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN 153
D S SI C L L D L +Q+H +IR GF +DV + +
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMIT 175
Query: 154 MYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEF 212
Y KC ++ A ++M+ ++ V+ ++ GY+Q+ D ++ M+ K +
Sbjct: 176 YYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV 235
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
V +AC D+ G ++H ++ ++ ++S+ ++ FY+KCG + A F+ +
Sbjct: 236 TVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM 295
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV------------------ILNSF- 313
E + ++ AII+GY G +A+ F + S G+ ++NSF
Sbjct: 296 SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
Query: 314 ------------VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+++ + + S+L G ++HA AI+ G + +++I Y+K G
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLN 420
L A + F + IAWTAII AYA HG S+ A LF +M G +P+ VT +L+
Sbjct: 416 FLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS 475
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
A +HSG + DSM KY ++P ++HY CM+ V SRAG L +A+E I MP +P
Sbjct: 476 AFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIA 535
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
W LL G +LE A A ++F ++P ++ Y M NL+ AG W+EA R M
Sbjct: 536 KVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKM 595
Query: 541 AERNLRK 547
L+K
Sbjct: 596 KRIGLKK 602
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 196/416 (47%), Gaps = 54/416 (12%)
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
QLH++++ D + + L + Y + A +++T +NA + L++ YT
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 191 RHTDALLLFAKMI------KEGVKLDEFVFSIVLKACAALKDINTG---RQIHSYSVKLG 241
+ DA LF I + + D S VLKA + D G RQ+H + ++ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFD------K 295
+S+V VG ++ +Y+KC E+A + F+ + E + SW+++I+GY QSG F+ K
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMIT 355
A+ + + GV + S +FQAC SDL++G +VH I+ + LS +A+I
Sbjct: 223 AMLACSDFKPNGVTVIS-----VFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 356 MYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG----------------------- 392
Y+KCG LDYA F + + D++ + AII Y HG
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 393 ---------KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYG 443
E + F +M+R G RPN VT LL + ++S +K GK+ + + +++ G
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE-IHAFAIRNG 396
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA 499
D I +I Y++ G L A + + + ++W ++ H + ++A
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGDSDSA 451
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 26 LSDGKLFHN-RLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISA 84
L GK H ++ A+ N ++ I+ Y A+RVFD DR L +W II+A
Sbjct: 382 LKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITA 441
Query: 85 YAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
YA G A LF +M LG KP +L +FA ++ + + ++
Sbjct: 442 YAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSML 494
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 247/483 (51%), Gaps = 40/483 (8%)
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+ P+ I L P A + GK++H+ +I+ GF D++I L +++KCG L A
Sbjct: 31 LSPAKYIAGALQEHINSP-APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYAR 89
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA-- 223
+++ A ++ GY + + LLL +M G K D + S+VLKA +
Sbjct: 90 QVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG 149
Query: 224 ---LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSW 280
+ + R +H+ +K +E + + T LVD Y K G+ E+A FE++++ N
Sbjct: 150 STMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCC 209
Query: 281 SAIITGYCQSGRFDKALETFKNIRSKGVIL------------------------------ 310
+++I+GY G + A E F + K +++
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 311 --NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
N + ++ ACS ++ G QVHA +K G+ ++ S+++ MY+KCG ++ A +
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARR 329
Query: 369 AFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
F +++ + +WT++I Y +G EA++LF +M + PN VTF+G L+ACSHSGL
Sbjct: 330 VFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
V +G + +SM Y + P ++HY C++ + RAG L +A E R+MP PD+ W LL
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALL 449
Query: 488 GGCWSHRNLETASIAAGKIFHLDP-LDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
C H N+E ASIAA ++F L+ Y+ + N++A WD ++ R++M R +
Sbjct: 450 SSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRIS 509
Query: 547 KEV 549
K +
Sbjct: 510 KTI 512
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 183/411 (44%), Gaps = 56/411 (13%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
IL + C C S+ A +VFDE+ L ++ +IS Y + G + + L RM G K
Sbjct: 77 ILHLKCGCLSY--ARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKAD 134
Query: 110 SSIFCTLL-GSFADPSALELGKQL----HSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
+L S + S + L + L H+++I+ D + T L + Y+K G L+ A
Sbjct: 135 GYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESA 194
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA------------------------ 200
M +N V CT ++ GY DA +F
Sbjct: 195 RTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETA 254
Query: 201 --------KMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPL 252
M + G + F+ V+ AC+ L G+Q+H+ +K G+ + + +G+ L
Sbjct: 255 KRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSL 314
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
+D Y+KCG A + F+ ++E N FSW+++I GY ++G ++ALE F ++ + N
Sbjct: 315 LDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNY 374
Query: 313 FVYTNIFQACSAISDLVYGAQVHAD-----AIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+ ACS + G ++ ++K + Y + ++ + + G L+ A+
Sbjct: 375 VTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY----ACIVDLMGRAGDLNKAF 430
Query: 368 Q-AFLTIEKPDTIAWTAIICAYAYHGKSE-----AVKLFHKMLRSGVRPNA 412
+ A E+PD+ W A++ + HG E A +LF L + RP A
Sbjct: 431 EFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK--LNADKRPGA 479
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKS 59
M A + ++ + C +L + G+ H ++ + + + +L MY C
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A RVFD+M ++++FSW ++I Y + G+ A+ LF+RM + I+P+ + T LG+
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPN---YVTFLGA 380
Query: 120 FADPSALELGKQLHSQLIRIGF 141
+ S HS L+ G+
Sbjct: 381 LSACS--------HSGLVDKGY 394
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 249/497 (50%), Gaps = 41/497 (8%)
Query: 54 YCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG-IKPSSSI 112
YC A +FD M +R++ +W +I Y + G LF RM G +K +S+
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 113 FCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT 172
+ + D G Q+H + R+ D+ + +L +MY K G++ A+ M
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 173 TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQ 232
K++V+ L+ G Q + ++A LF KM G+
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKM--------------------------PGKD 371
Query: 233 IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
+ S+ T ++ +S G + F + E ++ +W+A+I+ + +G
Sbjct: 372 MVSW-------------TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGY 418
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
+++AL F + K V NS+ ++++ A ++++DL+ G Q+H +K +V LS +++
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPN 411
+++MY KCG + AY+ F I +P+ +++ +I Y+Y+G +A+KLF + SG PN
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
VTF+ LL+AC H G V G ++ SM Y ++P DHY CM+ + R+GLL +A +I
Sbjct: 539 GVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLI 598
Query: 472 RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWD 531
+MP +P + W +LL +H ++ A +AA K+ L+P + YV + L+++ G
Sbjct: 599 STMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNR 658
Query: 532 EAAQYRKMMAERNLRKE 548
+ + + + ++K+
Sbjct: 659 DCDRIMNIKKSKRIKKD 675
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 207/489 (42%), Gaps = 106/489 (21%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM-------------------LD 103
AE +F +M +R + SW +ISAYAE G M A ++F M D
Sbjct: 69 AEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCD 128
Query: 104 LGIKPSSSIFC-----------TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
LG + +FC T++ F + + L+++ + F V+ LS
Sbjct: 129 LG--KAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE-TPVKFRDSVASNVLLS 185
Query: 153 NM------------------------------YIKCGWLDGAEVATNKMTTKNAVACTGL 182
Y K G + A ++MT +N + T +
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAM 245
Query: 183 MVGYTQALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
+ GY +A D LF +M +EG VK++ +++ KAC G QIH ++
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP 305
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
LE ++ +G L+ YSK G A F ++ + SW+++ITG Q + +A E F+
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFE 365
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ K ++ + +D++ G SG+ + SKC
Sbjct: 366 KMPGKDMV--------------SWTDMIKG---------------FSGKGEI----SKCV 392
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLN 420
+L F + + D I WTA+I A+ +G EA+ FHKML+ V PN+ TF +L+
Sbjct: 393 EL------FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
A + + EG Q + VK + + N ++ +Y + G +A ++ + EP+
Sbjct: 447 ATASLADLIEGLQ-IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS-EPNI 504
Query: 481 LSWKTLLGG 489
+S+ T++ G
Sbjct: 505 VSYNTMISG 513
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 10 PRSY--KHLFKMCGMLGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKSFTAAERV 66
P SY + L L +G H R+ +M N + N ++ MYC C + A ++
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
F + + ++ S+ T+IS Y+ G A++LFS + G +P+ F LL + +
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYV 555
Query: 127 ELG 129
+LG
Sbjct: 556 DLG 558
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 248/487 (50%), Gaps = 16/487 (3%)
Query: 73 RDLFSWATIISAYAEEGHMI--GAIRLFSRMLDL--GIKPSSSIF----CTLLGSFADPS 124
R+ SW TI+S Y++ + L++RM G+ + +F C LG
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLG------ 123
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
LE G +H ++ G D + +L MY + G ++ A+ +++ +N+V LM
Sbjct: 124 LLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMK 183
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG-LE 243
GY + + + LF M G+ LD ++KAC + G+ +H S++ ++
Sbjct: 184 GYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
+ ++D Y KC + A + FE+ + N W+ +I+G+ + R +A + F+ +
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
+ ++ N I +CS++ L +G VH I+ G+ ++ I MY++CG +
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 364 DYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
A F + + + I+W+++I A+ +G EA+ FHKM V PN+VTF+ LL+AC
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
SHSG VKEG + +SM+ YGV P +HY CM+ + RAG + EA I +MP +P +
Sbjct: 424 SHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASA 483
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
W LL C H+ ++ A A K+ ++P S+ YV + N++A AG W+ R+ M
Sbjct: 484 WGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGI 543
Query: 543 RNLRKEV 549
+ RK V
Sbjct: 544 KGYRKHV 550
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 205/433 (47%), Gaps = 8/433 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDC 57
M C +D + K C LG L +G L H M NG + ++ +++MY
Sbjct: 100 MRRHCDGVDSFNLVFAIKACVGLGLLENGILIHG--LAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
+ +A++VFDE+ R+ W ++ Y + RLF M D G+ + L+
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVS-IETTLSNMYIKCGWLDGAEVATNKMTTKNA 176
+ + A ++GK +H IR F ++ ++ +MY+KC LD A +N
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNV 277
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
V T L+ G+ + R +A LF +M++E + ++ + +L +C++L + G+ +H Y
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKA 296
++ G+E + T +D Y++CG + A F+ + E N SWS++I + +G F++A
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 297 LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG-AQVHADAIKKGLVQYLSGESAMIT 355
L+ F ++S+ V+ NS + ++ ACS ++ G Q + G+V + M+
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVD 457
Query: 356 MYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVT 414
+ + G++ A + KP AW A++ A H + + + L S +
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
Query: 415 FIGLLNACSHSGL 427
++ L N + +G+
Sbjct: 518 YVLLSNIYADAGM 530
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 216/434 (49%), Gaps = 14/434 (3%)
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT--T 173
LL + L +Q+H+++I GF +V + ++L+N YI+ LD A + N++
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 174 KNAVACTGLMVGYTQALR--HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
+N + ++ GY+++ ++D LLL+ +M + +D F +KAC L + G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSG 291
IH ++K GL+ + V LV+ Y++ G E+A + F+ I N W ++ GY +
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV---QYLS 348
+ + F +R G+ L++ + +AC + G VH +I++ + YL
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL- 248
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSG 407
++++I MY KC LD A + F T + + WT +I +A ++ EA LF +MLR
Sbjct: 249 -QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 408 VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
+ PN T +L +CS G ++ GK M ++ G++ ++ I +Y+R G +Q A
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 468 LEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPL-DSATYVTMFNLHAL 526
+ MP E + +SW +++ + E A K+ + + +S T+V++ + +
Sbjct: 367 RTVFDMMP-ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 527 AGNWDEA-AQYRKM 539
+GN E Q+ M
Sbjct: 426 SGNVKEGWKQFESM 439
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 255/481 (53%), Gaps = 22/481 (4%)
Query: 72 DRD-LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT--LLGSFADPSALEL 128
D+D +F II+ G + GA+R+F G++ ++I L+G DPS +
Sbjct: 57 DQDQIFPLNKIIARCVRSGDIDGALRVFH-----GMRAKNTITWNSLLIGISKDPSRMME 111
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
QL ++ D + + Y++ + A+ ++M K+A + ++ GY +
Sbjct: 112 AHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYAR 167
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
A LF M+++ +E ++ ++ D+ S+ K+ V
Sbjct: 168 RGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVA 219
Query: 249 GTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
T ++ Y K + E A F+ + N +W+A+I+GY ++ R + L+ F+ + +G
Sbjct: 220 WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+ NS ++ CS +S L G Q+H K L ++ +++I+MY KCG+L A+
Sbjct: 280 IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
+ F ++K D +AW A+I YA HG ++ A+ LF +M+ + +RP+ +TF+ +L AC+H+G
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
LV G + +SM Y V+P DHY CM+ + RAG L+EAL++IRSMPF P + TL
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 487 LGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
LG C H+N+E A AA K+ L+ ++A YV + N++A W++ A+ RK M E N+
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 547 K 547
K
Sbjct: 520 K 520
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 168/392 (42%), Gaps = 43/392 (10%)
Query: 33 HNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMI 92
H + + F N +L Y +F A+ FD M +D SW T+I+ YA G M
Sbjct: 113 HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEME 172
Query: 93 GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
A LF M++ + + ++ + + LE S ++ V T +
Sbjct: 173 KARELFYSMME----KNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMI 224
Query: 153 NMYIKCGWLDGAEVATNKMT-TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDE 211
Y+K ++ AE MT KN V ++ GY + R D L LF M++EG++ +
Sbjct: 225 TGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFES 271
S L C+ L + GRQIH K L ++V+ T L+ Y KCG A + FE
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 272 IREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
+++ + +W+A+I+GY Q G DKAL F+ + + + + + AC+
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN-------- 396
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
HA + G+ + S M+ DY + P +T ++
Sbjct: 397 ---HAGLVNIGMAYFES----MVR--------DYKVE-------PQPDHYTCMVDLLGRA 434
Query: 392 GK-SEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
GK EA+KL M RP+A F LL AC
Sbjct: 435 GKLEEALKLIRSM---PFRPHAAVFGTLLGAC 463
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 20 CGMLGALSDGKLFHNRLQRMANGNKFID-NCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
C L AL G+ H + + N ++ MYC C A ++F+ M +D+ +W
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
+IS YA+ G+ A+ LF M+D I+P F +L + + +G ++R
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 139 IGFTADVSIE------TTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRH 192
D +E T + ++ + G L+ A M + A G ++G + ++
Sbjct: 414 -----DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKN 468
Query: 193 TD 194
+
Sbjct: 469 VE 470
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 277/559 (49%), Gaps = 35/559 (6%)
Query: 11 RSYKHLFKMCGMLGALSDGKLFHNRLQRMA---NGNKFIDNCILQMYCDCKSFTAAERVF 67
++Y LF+ C L DG H+ + + N + N ++ MY C + A +VF
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
D M +R++ SW +I+ Y + G+ LFS ML P+ ++L S E
Sbjct: 120 DTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTS----CRYE 174
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE-----VATNKMTTKNAVACTGL 182
GKQ+H +++G + + + +MY +C DGA + KN V +
Sbjct: 175 PGKQVHGLALKLGLHCSIYVANAVISMYGRCH--DGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL---KDINTGR------QI 233
+ + A+ +F +M +GV D + +L C++L D+ Q+
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDR---ATLLNICSSLYKSSDLVPNEVSKCCLQL 289
Query: 234 HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC-QAFESIREPNDF-SWSAIITGYCQSG 291
HS +VK GL ++ V T L+ YS+ C + F + D +W+ IIT +
Sbjct: 290 HSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD 349
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
++A+ F +R + + + + ++++ +AC+ + + +HA IK G + +
Sbjct: 350 P-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNN 408
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLRSGVRP 410
++I Y+KCG LD + F ++ D ++W +++ AY+ HG+ +++ +F KM + P
Sbjct: 409 SLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINP 465
Query: 411 NAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
++ TFI LL+ACSH+G V+EG + SM K P ++HY C+I + SRA EA E+
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 471 IRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL-DPLDSATYVTMFNLHALAGN 529
I+ MP +PD + W LLG C H N +AA K+ L +P +S +Y+ M N++ G+
Sbjct: 526 IKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGS 585
Query: 530 WDEAAQYRKMMAERNLRKE 548
++EA K M +RKE
Sbjct: 586 FNEANLSIKEMETWRVRKE 604
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 228/454 (50%), Gaps = 46/454 (10%)
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK---MTTKNAVACTGLMVGYTQ 188
+H+++IR D + L + C LD + A + ++ N T ++ G+
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRV---CSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVS 104
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
+ R D + L+ +MI V D +V + VLKAC D+ R+IH+ +KLG S SV
Sbjct: 105 SGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSV 160
Query: 249 G-------------------------------TPLVDFYSKCGRFEAACQAFESIREPND 277
G T +++ YS+CG + A + F+ ++ +
Sbjct: 161 GLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDT 220
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA- 336
W+A+I G ++ +KALE F+ ++ + V N F + ACS + L G VH+
Sbjct: 221 VCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 337 -DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS- 394
+ + L ++ +A+I MYS+CG ++ A + F + D I++ +I A HG S
Sbjct: 281 VENQRMELSNFVG--NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASV 338
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCM 454
EA+ F M+ G RPN VT + LLNACSH GL+ G + +SM + V+P I+HY C+
Sbjct: 339 EAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCI 398
Query: 455 IGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDS 514
+ + R G L+EA I ++P EPD + TLL C H N+E A ++F + DS
Sbjct: 399 VDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDS 458
Query: 515 ATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
TYV + NL+A +G W E+ + R+ M + + KE
Sbjct: 459 GTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 492
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 182/407 (44%), Gaps = 39/407 (9%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VF + + +++ + +I + G + L+ RM+ + P + + ++L +
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA----CD 138
Query: 126 LELGKQLHSQLIRIGFTADVSI-------------------------------ETTLSNM 154
L++ +++H+Q++++GF + S+ T + N
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 155 YIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
Y +CG++ A + K+ V T ++ G + AL LF +M E V +EF
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
VL AC+ L + GR +HS+ +E VG L++ YS+CG A + F +R+
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
+ S++ +I+G G +A+ F+++ ++G N + ACS L G +V
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Query: 335 HADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYH 391
+++K+ + + ++ + + G+L+ AY+ I +PD I ++ A H
Sbjct: 379 F-NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIH 437
Query: 392 GKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
G E + K L P++ T++ L N + SG KE + +SM
Sbjct: 438 GNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
VL++C K+I IH+ ++ + + V L+ S + A F + PN
Sbjct: 35 VLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
+ ++A+I G+ SGR + + + V+ +++V T++ +AC DL ++HA
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHA 147
Query: 337 DAIKKGL------------VQYLSGE-------------------SAMITMYSKCGKLDY 365
+K G + SGE + MI YS+CG +
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 366 AYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
A + F ++ DT+ WTA+I + + ++A++LF +M V N T + +L+ACS
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWK 484
G ++ G+ ++ S ++ + N +I +YSR G + EA + R M + D +S+
Sbjct: 268 LGALELGR-WVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR-DKDVISYN 325
Query: 485 TLLGGCWSH 493
T++ G H
Sbjct: 326 TMISGLAMH 334
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 221/417 (52%), Gaps = 1/417 (0%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
K+++ ++ GF + + + M++KCG + A +++ +N + ++ G+
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
+ +A LF M +E + F+++L+A A L I G+Q+H ++KLG+ V
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVS 262
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
L+D YSKCG E A AFE + E +W+ +I GY G ++AL ++R GV
Sbjct: 263 CGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVS 322
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
++ F + + + + ++ L Q HA I+ G + +A++ YSK G++D A
Sbjct: 323 IDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYV 382
Query: 370 FLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F + + + I+W A++ YA HG+ ++AVKLF KM+ + V PN VTF+ +L+AC++SGL
Sbjct: 383 FDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLS 442
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
++G + SMS +G+ P HY CMI + R GLL EA+ IR P + W LL
Sbjct: 443 EQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLN 502
Query: 489 GCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
C NLE + A K++ + P YV M+N++ G EAA + + + L
Sbjct: 503 ACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 217/479 (45%), Gaps = 55/479 (11%)
Query: 39 MANG---NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAI 95
M+NG +++ N IL M+ C A R+FDE+ +R+L+S+ +IIS + G+ + A
Sbjct: 150 MSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAF 209
Query: 96 RLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMY 155
LF M + + F +L + A ++ +GKQLH +++G + + L +MY
Sbjct: 210 ELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMY 269
Query: 156 IKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFS 215
KCG ++ A A M K VA ++ GY +AL L M GV +D+F S
Sbjct: 270 SKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLS 329
Query: 216 IVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
I+++ L + +Q H+ ++ G ESE+ T LVDFYSK GR + A F+ +
Sbjct: 330 IMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRK 389
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQAC--SAISDL---VY 330
N SW+A++ GY GR A++ F+ + + V N + + AC S +S+ ++
Sbjct: 390 NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIF 449
Query: 331 GAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY 390
+ IK + Y + MI + + G LD A AF+
Sbjct: 450 LSMSEVHGIKPRAMHY----ACMIELLGRDGLLDEAI-AFIR------------------ 486
Query: 391 HGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP-TID 449
R+ ++ + LLNAC ++ G+ + + YG+ P +
Sbjct: 487 --------------RAPLKTTVNMWAALLNACRMQENLELGRVVAEKL---YGMGPEKLG 529
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC-WSHRNLETASIAAGKIF 507
+Y M +Y+ G EA ++ ++ E LS ++ C W +T S +G F
Sbjct: 530 NYVVMYNMYNSMGKTAEAAGVLETL--ESKGLS---MMPACTWVEVGDQTHSFLSGDRF 583
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 4/305 (1%)
Query: 191 RHTDALLLFAKM-IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
R +A LF + I+ K+ + +++AC LK I ++++ + + G E E +
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
++ + KCG A + F+ I E N +S+ +II+G+ G + +A E FK + +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
+ + + +A + + + G Q+H A+K G+V +I MYSKCG ++ A A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 370 FLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F + + T+AW +I YA HG S EA+ L + M SGV + T ++ + +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
+ KQ S+ ++ G + I ++ YS+ G + A + +P + +SW L+G
Sbjct: 342 ELTKQAHASL-IRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMG 399
Query: 489 GCWSH 493
G +H
Sbjct: 400 GYANH 404
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 262/541 (48%), Gaps = 39/541 (7%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
F+ N ++ Y A +F M +DL SW +I+ YA A +LF ++
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHK 323
Query: 105 G-IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFT-ADVSIETTLSNMYIKCGWLD 162
G + P S ++L A + L GK++HS ++R + D S+ L + Y + G
Sbjct: 324 GDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTS 383
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
A A + M+TK+ ++ ++ + + + L L ++ E + LD +LK C
Sbjct: 384 AAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCI 443
Query: 223 ALKDINTGRQIHSYSVKLGL---ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF- 278
++ I +++H YSVK GL E E +G L+D Y+KCG E A + F + E
Sbjct: 444 NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLV 503
Query: 279 SWSAIITGYCQSGRFD-------------------------------KALETFKNIRSKG 307
S++++++GY SG D +A+ F+ I+++G
Sbjct: 504 SYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARG 563
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
+ N+ N+ C+ ++ L Q H I+ GL + + ++ +Y+KCG L +AY
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAY 622
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
F + + D + +TA++ YA HG+ EA+ ++ M S ++P+ V +L AC H+G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
L+++G Q DS+ +G+ PT++ Y C + + +R G L +A + MP EP+ W TL
Sbjct: 683 LIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTL 742
Query: 487 LGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
L C ++ ++ A + + D+ +V + N++A W+ + R +M ++ ++
Sbjct: 743 LRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMK 802
Query: 547 K 547
K
Sbjct: 803 K 803
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 232/505 (45%), Gaps = 52/505 (10%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCK-SFTAAERVFDEMVDR 73
+ +C LG +GK H+ + + + + N ++ MY F A FD + D+
Sbjct: 128 VLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK 187
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL---GSFADPSALELGK 130
D+ SW II+ ++E M A R F ML +P+ + +L S A G+
Sbjct: 188 DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 131 QLHSQLI-RIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
Q+HS ++ R V + +L + Y++ G ++ A +M +K+ V+ ++ GY
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 190 LRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG-LESEVS 247
A LF ++ +G V D +L CA L D+ +G++IHSY ++ L + S
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
VG L+ FY++ G AA AF + + SW+AI+ + S + + L ++ ++
Sbjct: 368 VGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEA 427
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE---SAMITMYSKCGKLD 364
+ L+S ++ + C + + +VH ++K GL+ +A++ Y+KCG ++
Sbjct: 428 ITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVE 487
Query: 365 YAYQAFLTI-EKPDTIAWTAIICAYAYHG------------------------------- 392
YA++ FL + E+ +++ +++ Y G
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESC 547
Query: 393 -KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG---LVKEGKQFLDSMSVKYGVDPTI 448
+EA+ +F ++ G+RPN VT + LL C+ LV++ ++ ++ G+ I
Sbjct: 548 CPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI----IRGGLG-DI 602
Query: 449 DHYNCMIGVYSRAGLLQEALEMIRS 473
++ VY++ G L+ A + +S
Sbjct: 603 RLKGTLLDVYAKCGSLKHAYSVFQS 627
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 192/408 (47%), Gaps = 16/408 (3%)
Query: 92 IGAIRLFSRMLDL--GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIET 149
+G +R F + L G +F ++ + A S L G+ LH + ++G A +
Sbjct: 1 MGPLRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSK 60
Query: 150 TLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
++ NMY KC +D + +M + + V ++ G + + A + K
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKP 120
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR-FEAACQA 268
F+IVL C L D G+ +HSY +K GLE + VG LV Y+K G F A A
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 269 FESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDL 328
F+ I + + SW+AII G+ ++ A +F + + N N+ C+++
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 329 V---YGAQVHADAIKKGLVQ-YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAI 384
+ G Q+H+ +++ +Q ++ +++++ Y + G+++ A F + D ++W +
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 385 ICAYAYHGK-SEAVKLFHKMLRSG-VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY 442
I YA + + +A +LFH ++ G V P++VT I +L C+ + GK+ + S +++
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE-IHSYILRH 359
Query: 443 GV---DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
D ++ N +I Y+R G A M + D +SW +L
Sbjct: 360 SYLLEDTSVG--NALISFYARFGDTSAAYWAFSLMSTK-DIISWNAIL 404
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 178/423 (42%), Gaps = 44/423 (10%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN--GNKFIDNCILQMYCDCKSFTAA 63
+S D + + +C L L+ GK H+ + R + + + N ++ Y +AA
Sbjct: 326 VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAA 385
Query: 64 ERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
F M +D+ SW I+ A+A+ + L +L+ I S +LL +
Sbjct: 386 YWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINV 445
Query: 124 SALELGKQLHSQLIRIGFTAD---VSIETTLSNMYIKCGWLDGA-EVATNKMTTKNAVAC 179
+ K++H ++ G D + L + Y KCG ++ A ++ + V+
Sbjct: 446 QGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSY 505
Query: 180 TGLMVGYTQALRHTDALLLFAKMIK-------------------------------EGVK 208
L+ GY + H DA +LF +M G++
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA 268
+ +L CA L ++ RQ H Y ++ GL ++ + L+D Y+KCG + A
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSV 624
Query: 269 FESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDL 328
F+S + ++A++ GY GR +AL + ++ + + T + AC +
Sbjct: 625 FQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLI 684
Query: 329 VYGAQVHADAIK--KGLVQYLSGESAMITMYSKCGKLDYAYQAFLT--IEKPDTIAWTAI 384
G Q++ D+I+ G+ + + + + ++ G+LD AY +F+T +P+ W +
Sbjct: 685 QDGLQIY-DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAY-SFVTQMPVEPNANIWGTL 742
Query: 385 ICA 387
+ A
Sbjct: 743 LRA 745
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/437 (31%), Positives = 222/437 (50%), Gaps = 49/437 (11%)
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD--ALLLFAKMIK-EGVKLDEFVFSIV 217
LD A N+M +N + ++ G++++ A+ LF +M+ E V+ + F F V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 218 LKACAALKDINTGRQIHSYSVKLGL----------------------------------- 242
LKACA I G+QIH ++K G
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 243 ----------ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
+ E+ + ++D Y + G +AA F+ +R+ + SW+ +I+GY +G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
F A+E F+ ++ + N ++ A S + L G +H A G+ SA
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPN 411
+I MYSKCG ++ A F + + + I W+A+I +A HG++ +A+ F KM ++GVRP+
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
V +I LL ACSH GLV+EG+++ M G++P I+HY CM+ + R+GLL EA E I
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 472 RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWD 531
+MP +PD + WK LLG C N+E A + + P DS YV + N++A GNW
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 532 EAAQYRKMMAERNLRKE 548
E ++ R M E+++RK+
Sbjct: 495 EVSEMRLRMKEKDIRKD 511
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 183/419 (43%), Gaps = 50/419 (11%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAE--EGHMIGAIRLFSRML-DLGIKPSSSIFC 114
+ A ++F++M R+ FSW TII ++E E + AI LF M+ D ++P+ F
Sbjct: 73 RDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 115 TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT------ 168
++L + A ++ GKQ+H ++ GF D + + L MY+ CG++ A V
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 169 ---------------------------------------NKMTTKNAVACTGLMVGYTQA 189
+KM ++ V+ ++ GY+
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
DA+ +F +M K ++ + VL A + L + G +H Y+ G+ + +G
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
+ L+D YSKCG E A FE + N +WSA+I G+ G+ A++ F +R GV
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIK-KGLVQYLSGESAMITMYSKCGKLDYAYQ 368
+ Y N+ ACS + G + + + GL + M+ + + G LD A +
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 369 AFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
L + KPD + W A++ A G E K +L V ++ ++ L N + G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 28/246 (11%)
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG----KLDYAYQAFLTIEKPD 377
C I DL +Q+HA IK G ++ + ++ + LDYA++ F + + +
Sbjct: 33 CRTIRDL---SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 378 TIAWTAIICAYAYHGKSEA---VKLFHKMLRSG-VRPNAVTFIGLLNACSHSGLVKEGKQ 433
+W II ++ + +A + LF++M+ V PN TF +L AC+ +G ++EGKQ
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 434 FLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS----------- 482
+ +++KYG + ++ +Y G +++A + E D +
Sbjct: 150 -IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 483 --WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
W ++ G + + A + K+ + ++ TM + ++L G + +A + + M
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV---SWNTMISGYSLNGFFKDAVEVFREM 265
Query: 541 AERNLR 546
+ ++R
Sbjct: 266 KKGDIR 271
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 207/368 (56%), Gaps = 2/368 (0%)
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ GY + +AL + +M++ G + D F + +LKAC LK I G+QIH KLG
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
LE++V V L++ Y +CG E + FE + SWS++++ G + + L F+
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 302 NIRSK-GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKC 360
+ S+ + + AC+ L G +H ++ + +++++ MY KC
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC 282
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLL 419
G LD A F +EK + + ++A+I A HG+ E A+++F KM++ G+ P+ V ++ +L
Sbjct: 283 GCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVL 342
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
NACSHSGLVKEG++ M + V+PT +HY C++ + RAGLL+EALE I+S+P E +
Sbjct: 343 NACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKN 402
Query: 480 TLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
+ W+T L C +N+E IAA ++ L + Y+ + NL++ WD+ A+ R
Sbjct: 403 DVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTE 462
Query: 540 MAERNLRK 547
+A + L++
Sbjct: 463 IAIKGLKQ 470
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 5/331 (1%)
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
S A +F + D F + T+I Y A+ ++ M+ G +P + + LL
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+ ++ GKQ+H Q+ ++G ADV ++ +L NMY +CG ++ + K+ +K A +
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
+ ++ ++ LLLF M E +K +E L ACA +N G IH +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL 297
++ E + V T LVD Y KCG + A F+ + + N+ ++SA+I+G G + AL
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE-SAMITM 356
F + +G+ + VY ++ ACS + G +V A+ +K+G V+ + ++ +
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 357 YSKCGKLDYAYQAF--LTIEKPDTIAWTAII 385
+ G L+ A + + IEK D I W +
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVI-WRTFL 410
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 4/281 (1%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVF 67
D +Y L K C L ++ +GK H ++ ++ + F+ N ++ MY C + VF
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSFADPSAL 126
+++ + SW++++SA A G + LF M + +K S + L + A+ AL
Sbjct: 191 EKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL 250
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
LG +H L+R ++ ++T+L +MY+KCG LD A KM +N + + ++ G
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGL 310
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG-LESE 245
AL +F+KMIKEG++ D V+ VL AC+ + GR++ + +K G +E
Sbjct: 311 ALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPT 370
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIIT 285
LVD + G E A + +SI E ND W ++
Sbjct: 371 AEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/492 (30%), Positives = 247/492 (50%), Gaps = 25/492 (5%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI-KPSSSIFCTLLGSFADPS 124
VF+ + + W +I Y+ + + + RM+ G+ +P F ++ ++
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+ +G +H ++RIGF DV + T+ + Y KC L A +M +NAV+ T L+V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 185 GYTQALRHTDALLLFAKMIKEGVK-----LDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
Y ++ +A +F M + + +D V S L L D R I SY
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY--- 241
Query: 240 LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALET 299
T ++D Y+K G +A FE R + +WSA+I GY Q+G+ ++A +
Sbjct: 242 ----------TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKV 291
Query: 300 FKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA---DAIKKGLVQYLSGESAMITM 356
F + +K V + F+ + ACS + +V + + K Y+ A+I M
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV--PALIDM 349
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTF 415
+KCG +D A + F + + D +++ +++ A HG SEA++LF KM+ G+ P+ V F
Sbjct: 350 NAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAF 409
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP 475
+L C S LV+EG ++ + M KY + + DHY+C++ + SR G L+EA E+I+SMP
Sbjct: 410 TVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 476 FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQ 535
FE +W +LLGGC H N E A + A +F L+P + +YV + N++A W + A
Sbjct: 470 FEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAH 529
Query: 536 YRKMMAERNLRK 547
R M E + K
Sbjct: 530 LRDKMNENGITK 541
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 211/376 (56%), Gaps = 3/376 (0%)
Query: 175 NAVACTGLMVGYTQALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQI 233
N L+ GY + A L+ +M G V+ D + ++KA + D+ G I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 234 HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRF 293
HS ++ G S + V L+ Y+ CG +A + F+ + E + +W+++I G+ ++G+
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
++AL + + SKG+ + F ++ AC+ I L G +VH IK GL + L + +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRS-GVRPN 411
+ +Y++CG+++ A F + ++++WT++I A +G EA++LF M + G+ P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
+TF+G+L ACSH G+VKEG ++ M +Y ++P I+H+ CM+ + +RAG +++A E I
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 472 RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWD 531
+SMP +P+ + W+TLLG C H + + A A +I L+P S YV + N++A W
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 532 EAAQYRKMMAERNLRK 547
+ + RK M ++K
Sbjct: 444 DVQKIRKQMLRDGVKK 459
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 184/365 (50%), Gaps = 28/365 (7%)
Query: 63 AERVFDEMVDR-DLFSWATIISAYAEEGHMIGAIRLFSRMLDLG-IKPSSSIFCTLLGSF 120
A +VF ++ ++F W T+I YAE G+ I A L+ M G ++P + + L+ +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
+ + LG+ +HS +IR GF + + ++ +L ++Y CG + A +KM K+ VA
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++ G+ + + +AL L+ +M +G+K D F +L ACA + + G+++H Y +K+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
GL + L+D Y++CGR E A F+ + + N SW+++I G +G +A+E F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 301 KNIRS-KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY------------L 347
K + S +G++ + I ACS H +K+G + +
Sbjct: 312 KYMESTEGLLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRI 360
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRS 406
M+ + ++ G++ AY+ ++ +P+ + W ++ A HG S+ + F ++
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE-FARIQIL 419
Query: 407 GVRPN 411
+ PN
Sbjct: 420 QLEPN 424
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 150/303 (49%), Gaps = 6/303 (1%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAE 64
+ D +Y L K + + G+ H+ + R G+ ++ N +L +Y +C +A
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
+VFD+M ++DL +W ++I+ +AE G A+ L++ M GIKP +LL + A
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
AL LGK++H +I++G T ++ L ++Y +CG ++ A+ ++M KN+V+ T L+V
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 185 GYTQALRHTDALLLFAKM-IKEGVKLDEFVFSIVLKACAALKDINTGRQ-IHSYSVKLGL 242
G +A+ LF M EG+ E F +L AC+ + G + + +
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKALETFK 301
E + +VD ++ G+ + A + +S+ +PN W ++ G D L F
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFA 414
Query: 302 NIR 304
I+
Sbjct: 415 RIQ 417
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 208/372 (55%), Gaps = 9/372 (2%)
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
+M Y + DA+ ++ M++ V D + IV+KA + D G+++HS +V+LG
Sbjct: 88 IMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLG 147
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
+ + + Y K G FE A + F+ E SW+AII G +GR ++A+E F
Sbjct: 148 FVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFV 207
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH-----ADAIKKGLVQYLSGESAMITM 356
+++ G+ + F ++ +C + DL Q+H A +K + L+ ++I M
Sbjct: 208 DMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN---SLIDM 264
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTF 415
Y KCG++D A F + + + ++W+++I YA +G + EA++ F +M GVRPN +TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP 475
+G+L+AC H GLV+EGK + M ++ ++P + HY C++ + SR G L+EA +++ MP
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 476 FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQ 535
+P+ + W L+GGC ++E A A + L+P + YV + N++AL G W + +
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 536 YRKMMAERNLRK 547
RK+M + + K
Sbjct: 445 VRKLMKTKKVAK 456
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 173/408 (42%), Gaps = 33/408 (8%)
Query: 56 DCKSFTAAERVFDEMVDRDL-------FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKP 108
+C S R+ ++ + F W I+ +Y + AI+++ M+ + P
Sbjct: 56 NCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLP 115
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
++ + LGK+LHS +R+GF D E+ +Y K G + A
Sbjct: 116 DRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVF 175
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
++ + + ++ G A R +A+ +F M + G++ D+F V +C L D++
Sbjct: 176 DENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLS 235
Query: 229 TGRQIHSYSVKLGLE--SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITG 286
Q+H ++ E S++ + L+D Y KCGR + A FE +R+ N SWS++I G
Sbjct: 236 LAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVG 295
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
Y +G +ALE F+ +R GV N + + AC VH +++G +
Sbjct: 296 YAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC-----------VHGGLVEEGKTYF 344
Query: 347 ------------LSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGK 393
LS ++ + S+ G+L A + + KP+ + W ++ G
Sbjct: 345 AMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGD 404
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
E + + N ++ L N + G+ K+ ++ M K
Sbjct: 405 VEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTK 452
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 11/276 (3%)
Query: 29 GKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE 87
GK H+ R+ G++F ++ + +YC F A +VFDE +R L SW II
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 88 EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI--RIGFTADV 145
G A+ +F M G++P ++ S L L QLH ++ + +D+
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 146 SIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE 205
+ +L +MY KCG +D A +M +N V+ + ++VGY +AL F +M +
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 206 GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP----LVDFYSKCGR 261
GV+ ++ F VL AC + G+ +Y + E E+ G +VD S+ G+
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGK---TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Query: 262 FEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKA 296
+ A + E + +PN W ++ G + G + A
Sbjct: 373 LKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 6/270 (2%)
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P F W+ I+ Y + A++ + + V+ + + + +A I D G ++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS 394
H+ A++ G V ES IT+Y K G+ + A + F + +W AII + G++
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 395 -EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDS-MSVKYGVDPTIDHYN 452
EAV++F M RSG+ P+ T + + +C G + Q + K I N
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 453 CMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA--SIAAGKIFHLD 510
+I +Y + G + A + M + + +SW +++ G ++ N A + F +
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
P + T+V + + G +E Y MM
Sbjct: 319 P-NKITFVGVLSACVHGGLVEEGKTYFAMM 347
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 20 CGMLGALSDGKLFHNRLQRMANGNK---FIDNCILQMYCDCKSFTAAERVFDEMVDRDLF 76
CG LG LS H + + K + N ++ MY C A +F+EM R++
Sbjct: 228 CGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
SW+++I YA G+ + A+ F +M + G++P+ F +L + +E GK + +
Sbjct: 288 SWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM 347
Query: 137 IRIGFTADVSIETTLS------NMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
++ +E LS ++ + G L A+ +M K V G ++G
Sbjct: 348 -----KSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 262/540 (48%), Gaps = 26/540 (4%)
Query: 17 FKMCGMLGALSDGKLFHNRLQR--------MANGNKFIDNCILQMYCDCKSFTAAERVFD 68
FK G ++ G F N L + M+ N N ++ Y + A VF+
Sbjct: 45 FKAIGSWNSIVSG-YFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFE 103
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
M +R++ SW ++ Y +EG + A LF RM + + + + G D ++
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE----RNEVSWTVMFGGLIDDGRIDK 159
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
++L+ + DV T + + G +D A + ++M +N V T ++ GY Q
Sbjct: 160 ARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
R A LF M ++ E ++ +L I + + ++ ++
Sbjct: 216 NNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEV---MPMKPVIAC 268
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
+V F + G A + F+ + + ++ +W +I Y + G +AL+ F ++ +GV
Sbjct: 269 NAMIVGF-GEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
+ +I C+ ++ L YG QVHA ++ + S ++TMY KCG+L A
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 369 AFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
F D I W +II YA HG EA+K+FH+M SG PN VT I +L ACS++G
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
++EG + +SM K+ V PT++HY+C + + RAG + +A+E+I SM +PD W LL
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 488 GGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
G C +H L+ A +AA K+F +P ++ TYV + +++A W + A RK M N+ K
Sbjct: 508 GACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSK 567
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNA 412
I+ S+ GK++ A + F +++ +W +I+ Y +G EA +LF +M N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NV 79
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
V++ GL++ + ++ E + + M + + + M+ Y + G++ EA +
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 473 SMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPL-DSATYVTMFNLHALAGNWD 531
MP E + +SW + GG ++ A K++ + P+ D M G D
Sbjct: 135 RMP-ERNEVSWTVMFGGLIDDGRIDKAR----KLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 532 EAAQYRKMMAERNL 545
EA M ERN+
Sbjct: 190 EARLIFDEMRERNV 203
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 228/435 (52%), Gaps = 6/435 (1%)
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L S + P L K++H+ ++R GF+ S+ T L + G + A ++M
Sbjct: 17 LRASSSKPKQL---KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
L GY + ++LLL+ KM GV+ DEF + V+KA + L D + G +H+
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
+ VK G V T LV Y K G +A FES++ + +W+A + Q+G
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMIT 355
ALE F + + V +SF ++ AC + L G +++ A K+ + + E+A +
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 356 MYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVT 414
M+ KCG + A F +++ + ++W+ +I YA +G S EA+ LF M G+RPN VT
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 415 FIGLLNACSHSGLVKEGKQFLDSM--SVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
F+G+L+ACSH+GLV EGK++ M S ++P +HY CM+ + R+GLL+EA E I+
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 473 SMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDE 532
MP EPDT W LLG C HR++ A + P + +V + N++A AG WD
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDC 433
Query: 533 AAQYRKMMAERNLRK 547
+ R M + +K
Sbjct: 434 VDKVRSKMRKLGTKK 448
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 4/333 (1%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A +VFDEM +F W T+ Y ++ L+ +M DLG++P + ++ + +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
G LH+ +++ GF + T L MY+K G L AE M K+ VA
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ Q AL F KM + V+ D F +L AC L + G +I+ + K +
Sbjct: 182 LAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
+ + V +D + KCG EAA FE +++ N SWS +I GY +G +AL F
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIK---KGLVQYLSGESAMITMYSK 359
++++G+ N + + ACS + G + + ++ K L + M+ + +
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Query: 360 CGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYH 391
G L+ AY+ + +PDT W A++ A A H
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 25/337 (7%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGN-KFIDNCILQMYCDCKS 59
M + + D +Y + K LG S G H + + G + ++ MY
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGE 159
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
++AE +F+ M +DL +W ++ + G+ A+ F++M ++ S ++L +
Sbjct: 160 LSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSA 219
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+LE+G++++ + + ++ +E +M++KCG + A V +M +N V+
Sbjct: 220 CGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSW 279
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
+ ++VGY +AL LF M EG++ + F VL AC+ +N G++ S V+
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 240 ---LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGR 292
LE +VD + G E +A+E I+ EP+ W A++ G C R
Sbjct: 340 SNDKNLEPRKEHYACMVDLLGRSGLLE---EAYEFIKKMPVEPDTGIWGALL-GACAVHR 395
Query: 293 --------FDKALETFKNIRSKGVILNSFVYTNIFQA 321
D +ET +I S V+L +NI+ A
Sbjct: 396 DMILGQKVADVLVETAPDIGSYHVLL-----SNIYAA 427
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 205/390 (52%), Gaps = 34/390 (8%)
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
H+ A+ ++ K+ K D F F VLK + D+ GRQIH V G +S V V T
Sbjct: 97 HSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTG 156
Query: 252 LVDFYSKCGRFEAACQAFE---------------------------SIRE------PNDF 278
L+ Y CG A + F+ S+ E N+
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
SW+ +I+GY +SGR +A+E F+ + + V + + AC+ + L G ++ +
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAV 397
+G+ + +S +A+I MY+K G + A F + + + + WT II A HG +EA+
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 398 KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGV 457
+F++M+++GVRPN VTFI +L+ACSH G V GK+ +SM KYG+ P I+HY CMI +
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 458 YSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATY 517
RAG L+EA E+I+SMPF+ + W +LL H +LE A ++ L+P +S Y
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNY 456
Query: 518 VTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+ + NL++ G WDE+ R MM ++K
Sbjct: 457 MLLANLYSNLGRWDESRMMRNMMKGIGVKK 486
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 146/337 (43%), Gaps = 35/337 (10%)
Query: 94 AIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN 153
AI ++ ++ L KP + F +L S + G+Q+H Q++ GF + V + T L
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 154 MYIKCGWLDGAEVATNKMTTK---------------------------------NAVACT 180
MY CG L A ++M K N V+ T
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++ GY ++ R ++A+ +F +M+ E V+ DE VL ACA L + G +I SY
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
G+ VS+ ++D Y+K G A FE + E N +W+ II G G +AL F
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV-HADAIKKGLVQYLSGESAMITMYSK 359
+ GV N + I ACS + + G ++ ++ K G+ + MI + +
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR 399
Query: 360 CGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
GKL A + ++ K + W +++ A H E
Sbjct: 400 AGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 35/270 (12%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDL---------------------------------F 76
++QMY C A ++FDEM+ +D+
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
SW +IS YA+ G AI +F RML ++P +L + AD +LELG+++ S +
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 137 IRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDAL 196
G VS+ + +MY K G + A + +N V T ++ G +AL
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-HSYSVKLGLESEVSVGTPLVDF 255
+F +M+K GV+ ++ F +L AC+ + ++ G+++ +S K G+ + ++D
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 256 YSKCGRFEAACQAFESIR-EPNDFSWSAII 284
+ G+ A + +S+ + N W +++
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 139/322 (43%), Gaps = 43/322 (13%)
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA 268
L+ FV S+ + ++ T +Q H Y + GL + ++ S G A
Sbjct: 14 LNWFVTSLKIHG----NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSV 69
Query: 269 FESIREPNDFSWSAIITGYC---QSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI 325
F PN + + +I + A+ ++ + + ++F + + + +
Sbjct: 70 FTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRV 129
Query: 326 SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDT------- 378
SD+ +G Q+H + G + + +I MY CG L A + F + D
Sbjct: 130 SDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALL 189
Query: 379 --------------------------IAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPN 411
++WT +I YA G+ SEA+++F +ML V P+
Sbjct: 190 AGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPD 249
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
VT + +L+AC+ G ++ G++ + + G++ + N +I +Y+++G + +AL++
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHR-GMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 472 RSMPFEPDTLSWKTLLGGCWSH 493
+ E + ++W T++ G +H
Sbjct: 309 ECVN-ERNVVTWTTIIAGLATH 329
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 234/433 (54%), Gaps = 41/433 (9%)
Query: 155 YIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
+I + A +++ + ++ T ++ + + RH +A F +++ G++ +EF F
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
V+ + +D+ G+Q+H Y++K+GL S V VG+ +++ Y K A + F+ R+
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 275 PNDFS-------------------------------WSAIITGYCQSGRFDKALETFKNI 303
PN S W+A+I G+ Q+GR ++A+ TF ++
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 304 RSKGVIL-NSFVYTNIFQACSAISDLVYGAQVHADAIK-KGLVQYLSGESAMITMYSKCG 361
+GV++ N + A S I+ G +HA AIK G + +++I+ YSKCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 362 KLDYAYQAF--LTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLR-SGVRPNAVTFIG 417
++ + AF L E+ + ++W ++I YA++G+ EAV +F KM++ + +RPN VT +G
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTI---DHYNCMIGVYSRAGLLQEALEMIRSM 474
+L AC+H+GL++EG + + Y DP + +HY CM+ + SR+G +EA E+I+SM
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 475 PFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAA 534
P +P WK LLGGC H N A +AA KI LDP D ++YV + N ++ NW +
Sbjct: 396 PLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVS 455
Query: 535 QYRKMMAERNLRK 547
R+ M E L++
Sbjct: 456 LIRRKMKETGLKR 468
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 175/400 (43%), Gaps = 62/400 (15%)
Query: 51 LQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSS 110
L + D A +VFDE+ + D+ S +I + +E + A + F R+L LGI+P+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 111 SIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK 170
F T++GS ++LGKQLH +++G ++V + + + N Y+K L A +
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 171 MTTKNAVACTGLMVGY-------------------------------TQALRHTDALLLF 199
N V+ T L+ GY +Q R+ +A+ F
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 200 AKMIKEGVKL-DEFVFSIVLKACAALKDINTGRQIHSYSVK-LGLESEVSVGTPLVDFYS 257
M++EGV + +E F + A + + G+ IH+ ++K LG V V L+ FYS
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 258 KCGRFEAACQAFESIREP--NDFSWSAIITGYCQSGRFDKALETF-KNIRSKGVILNSFV 314
KCG E + AF + E N SW+++I GY +GR ++A+ F K ++ + N+
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQY--------------LSGESAMITMYSKC 360
+ AC+ HA I++G + + L + M+ M S+
Sbjct: 334 ILGVLFACN-----------HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRS 382
Query: 361 GKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKL 399
G+ A + ++ P W A++ H KL
Sbjct: 383 GRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKL 422
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK-P 108
++ Y F A +F M +R + +W +I +++ G A+ F ML G+ P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIR-IGFTADVSIETTLSNMYIKCGWLDGAEVA 167
+ S F + + ++ ++ GK +H+ I+ +G +V + +L + Y KCG ++ + +A
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 168 TNKMT--TKNAVACTGLMVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAAL 224
NK+ +N V+ ++ GY R +A+ +F KM+K+ ++ + VL AC
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 225 KDINTG-----RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDF 278
I G + ++ Y LE E +VD S+ GRF+ A + +S+ +P
Sbjct: 345 GLIQEGYMYFNKAVNDYDDPNLLELEHYAC--MVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 279 SWSAIITGYCQ 289
W A++ G CQ
Sbjct: 403 FWKALLGG-CQ 412
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 251/496 (50%), Gaps = 13/496 (2%)
Query: 57 CKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTL 116
C+ A RVF+++ + ++ ++I A+A+ A +FS M G+ + + L
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 117 LGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT--NKMTTK 174
L + + S L + K +H+ + ++G ++D+ + L + Y +CG L + KM+ +
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 175 NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIH 234
+ V+ ++ G +A DA LF +M + D ++ +L A ++++ ++
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELF 239
Query: 235 SYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP--NDFSWSAIITGYCQSGR 292
K+ + VS T +V YSK G E A F+ + P N +W+ II GY + G
Sbjct: 240 E---KMPERNTVSWST-MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGL 295
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
+A + + G+ ++ +I AC+ L G ++H+ + L +A
Sbjct: 296 LKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNA 355
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPN 411
++ MY+KCG L A+ F I K D ++W ++ HG EA++LF +M R G+RP+
Sbjct: 356 LLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPD 415
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
VTFI +L +C+H+GL+ EG + SM Y + P ++HY C++ + R G L+EA++++
Sbjct: 416 KVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVV 475
Query: 472 RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWD 531
++MP EP+ + W LLG C H ++ A + LDP D Y + N++A A +W+
Sbjct: 476 QTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWE 535
Query: 532 EAAQYRKMMAERNLRK 547
A R M + K
Sbjct: 536 GVADIRSKMKSMGVEK 551
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 185/390 (47%), Gaps = 15/390 (3%)
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
S IF L + L KQLH+Q+IR D+ I L + C + A
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
N++ N C L+ + Q + A +F++M + G+ D F + +LKAC+ +
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP 134
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRF--EAACQAFESIREPNDFSWSAIITG 286
+ +H++ KLGL S++ V L+D YS+CG A + FE + E + SW++++ G
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
++G A F + + +I + + + ++ ++ ++ V +
Sbjct: 195 LVKAGELRDARRLFDEMPQRDLI----SWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIEKP--DTIAWTAIICAYAYHG-KSEAVKLFHKM 403
S M+ YSK G ++ A F + P + + WT II YA G EA +L +M
Sbjct: 251 ----STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
+ SG++ +A I +L AC+ SGL+ G + + S+ + + N ++ +Y++ G
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMR-IHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 464 LQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
L++A ++ +P + D +SW T+L G H
Sbjct: 366 LKKAFDVFNDIP-KKDLVSWNTMLHGLGVH 394
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 177/410 (43%), Gaps = 41/410 (10%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTA--AER 65
D +Y L K C L K+ HN ++++ + + ++ N ++ Y C A +
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFC--TLLGSFADP 123
+F++M +RD SW +++ + G + A RLF M P + T+L +A
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM------PQRDLISWNTMLDGYARC 229
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM--TTKNAVACTG 181
+ +L ++ + +T+ Y K G ++ A V +KM KN V T
Sbjct: 230 REMSKAFELFEKMPERNTVS----WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTI 285
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ GY + +A L +M+ G+K D +L AC ++ G +IHS +
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSN 345
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
L S V L+D Y+KCG + A F I + + SW+ ++ G G +A+E F
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA--------- 352
+R +G+ + + + +C+ HA I +G+ + S E
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCN-----------HAGLIDEGIDYFYSMEKVYDLVPQVEH 454
Query: 353 ---MITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVK 398
++ + + G+L A + T+ +P+ + W A++ A H + + K
Sbjct: 455 YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAK 504
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+R+ + + ++ Q ++L Q+HA I++ L + L +I+ S C +
Sbjct: 7 VRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQ 66
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNA 421
+ A + F +++P+ ++I A+A + + +A +F +M R G+ + T+ LL A
Sbjct: 67 TNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA 126
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL--QEALEMIRSMPFEPD 479
CS + K + + K G+ I N +I YSR G L ++A+++ M E D
Sbjct: 127 CSGQSWLPVVKMMHNHIE-KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERD 184
Query: 480 TLSWKTLLGGCWSHRNLETASIAAGKIFHLDP-LDSATYVTMFNLHALAGNWDEAAQYRK 538
T+SW ++LGG L A ++F P D ++ TM + +A +A + +
Sbjct: 185 TVSWNSMLGGLVKAGELRDAR----RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFE 240
Query: 539 MMAERN 544
M ERN
Sbjct: 241 KMPERN 246
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 8/229 (3%)
Query: 20 CGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
C G LS G H+ L+R G N ++ N +L MY C + A VF+++ +DL SW
Sbjct: 325 CTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSW 384
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
T++ GH AI LFSRM GI+P F +L S ++ G + +
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 139 I-GFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALL 197
+ V L ++ + G L A M + V G ++G A R + +
Sbjct: 445 VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLG---ACRMHNEVD 501
Query: 198 LFAKMIKEGVKLDEF---VFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
+ +++ VKLD +S++ AA +D I S +G+E
Sbjct: 502 IAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVE 550
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 202/367 (55%), Gaps = 2/367 (0%)
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGV-KLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
L+ G++ + +++L + +M+ V + D F F+ LK+C +K I +IH ++
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
G + V T LV YS G E A + F+ + + SW+ +I + G ++AL +
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKC 360
K + ++GV +S+ + +C+ +S L G +H A + +A+I MY+KC
Sbjct: 197 KRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKC 256
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLL 419
G L+ A F + K D + W ++I Y HG EA+ F KM+ SGVRPNA+TF+GLL
Sbjct: 257 GSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
CSH GLVKEG + + MS ++ + P + HY CM+ +Y RAG L+ +LEMI + D
Sbjct: 317 LGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHED 376
Query: 480 TLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
+ W+TLLG C HRNLE +A K+ L+ ++ YV M ++++ A + A RK+
Sbjct: 377 PVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKL 436
Query: 540 MAERNLR 546
+ +L+
Sbjct: 437 IRSHDLQ 443
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 154/342 (45%), Gaps = 6/342 (1%)
Query: 59 SFTAAERVFDEM-VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI-KPSSSIFCTL 116
S + A+ +FD D W +I ++ + +I ++RML + +P F
Sbjct: 54 SLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFA 113
Query: 117 LGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNA 176
L S ++ ++H +IR GF D + T+L Y G ++ A ++M ++
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDL 173
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
V+ ++ ++ H AL ++ +M EGV D + +L +CA + +N G +H
Sbjct: 174 VSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRI 233
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKA 296
+ + ES V V L+D Y+KCG E A F +R+ + +W+++I GY G +A
Sbjct: 234 ACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 297 LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG--LVQYLSGESAMI 354
+ F+ + + GV N+ + + CS LV H + + L + M+
Sbjct: 294 ISFFRKMVASGVRPNAITFLGLLLGCSH-QGLVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 355 TMYSKCGKLDYAYQA-FLTIEKPDTIAWTAIICAYAYHGKSE 395
+Y + G+L+ + + + + D + W ++ + H E
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLE 394
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 45 FIDNCIL-----QMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFS 99
F+D+ I+ + Y S A +VFDEM RDL SW +I ++ G A+ ++
Sbjct: 138 FLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYK 197
Query: 100 RMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG 159
RM + G+ S LL S A SAL +G LH I + V + L +MY KCG
Sbjct: 198 RMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCG 257
Query: 160 WLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
L+ A N M ++ + +++GY +A+ F KM+ GV+ + F +L
Sbjct: 258 SLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLL 317
Query: 220 ACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA-FESIREPND 277
C+ + G S + L V +VD Y + G+ E + + + S +
Sbjct: 318 GCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDP 377
Query: 278 FSWSAIITGYCQSGR 292
W ++ G C+ R
Sbjct: 378 VLWRTLL-GSCKIHR 391
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 268/554 (48%), Gaps = 53/554 (9%)
Query: 34 NRLQRMANGNKFIDNCILQMYCDCKSFTA----------AERVFDEMVDRDLFSWATIIS 83
+R+ ++ K D+C + S A A ++FDEM DR++ SW ++S
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS 87
Query: 84 AYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL------- 136
Y + G + A ++F M + + + L+ + +++ + L ++
Sbjct: 88 GYMKNGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 137 ---IRIGFTADVSIE-----------------TTLSNMYIKCGWLDGAEVATNKMTTKNA 176
+ IGF D I+ T++ + K G +D A ++M+ ++
Sbjct: 144 WTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV 203
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
+ T ++ GY Q R DA +F M ++ E ++ +L I ++
Sbjct: 204 ITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 237 -SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
VK V ++ + G A + F+S++E ND SW +I + ++G +
Sbjct: 260 MPVK-----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMIT 355
AL+ F ++ +GV +I C++++ L +G QVHA ++ + S ++T
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 356 MYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSG-VRPNAV 413
MY KCG+L + F D I W +II YA HG EA+K+F +M SG +PN V
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 414 TFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRS 473
TF+ L+ACS++G+V+EG + +SM +GV P HY CM+ + RAG EA+EMI S
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 474 MPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA 533
M EPD W +LLG C +H L+ A A K+ ++P +S TY+ + N++A G W +
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADV 554
Query: 534 AQYRKMMAERNLRK 547
A+ RK+M R +RK
Sbjct: 555 AELRKLMKTRLVRK 568
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 203/490 (41%), Gaps = 52/490 (10%)
Query: 22 MLGALSDGKLFH--NRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWA 79
++G L DG++ + + + + ++ C A +FDEM +R + +W
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWT 207
Query: 80 TIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRI 139
T+++ Y + + A ++F D+ + + + ++L + +E ++L +
Sbjct: 208 TMVTGYGQNNRVDDARKIF----DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM--- 260
Query: 140 GFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLF 199
++ +S + K G + A + M +N + ++ + + +AL LF
Sbjct: 261 PVKPVIACNAMISGLGQK-GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 200 AKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKC 259
M K+GV+ +L CA+L ++ G+Q+H+ V+ + +V V + L+ Y KC
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI-LNSFVYTNI 318
G + F+ + W++II+GY G ++AL+ F + G N +
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 319 FQACSAISDLVYGAQVHADAIKKGLVQYLSGESA------------MITMYSKCGKLDYA 366
ACS +A +++GL Y S ES M+ M + G+ + A
Sbjct: 440 LSACS-----------YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 367 YQAF--LTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
+ +T+E PD W +++ A H + + + K L N+ T+I L N +
Sbjct: 489 MEMIDSMTVE-PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYAS 547
Query: 425 SGL---VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG------------LLQEALE 469
G V E ++ + + V+ + + ++R G +L E
Sbjct: 548 QGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDG 607
Query: 470 MIRSMPFEPD 479
++R + PD
Sbjct: 608 LLREAGYNPD 617
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 159/371 (42%), Gaps = 39/371 (10%)
Query: 142 TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAK 201
TA+V I T LS + G + A + +K+ + ++ GY L DA LF +
Sbjct: 19 TANVRI-THLS----RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDE 73
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR 261
M + ++ ++ +I+ R++ L E V T LV Y G+
Sbjct: 74 MPDRNI----ISWNGLVSGYMKNGEIDEARKVFD----LMPERNVVSWTALVKGYVHNGK 125
Query: 262 FEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA 321
+ A F + E N SW+ ++ G+ Q GR D A + ++ I K ++ T++
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHG 181
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAW 381
+ ++ + ++ ++ + + M+T Y + ++D A + F + + ++W
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITW----TTMVTGYGQNNRVDDARKIFDVMPEKTEVSW 237
Query: 382 TAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
T+++ Y +G+ E A +LF M V+P + +++ G + + ++ DSM
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVM---PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 441 KYGVDPTIDHYNCMIGVYSRAGLLQEALE---MIRSMPFEPDTLSWKTLLGGCWSHRNLE 497
+ + +I ++ R G EAL+ +++ P + ++L C S
Sbjct: 294 RNDAS-----WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS----- 343
Query: 498 TASIAAGKIFH 508
AS+ GK H
Sbjct: 344 LASLHHGKQVH 354
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 246/476 (51%), Gaps = 7/476 (1%)
Query: 76 FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQ 135
FS+ T++S+YA I + + G P F + + S + GKQ+H
Sbjct: 72 FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 136 LIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDA 195
+ ++GF D+ ++ +L + Y CG A +M ++ V+ TG++ G+T+ + +A
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 196 LLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDF 255
L F+KM V+ + + VL + + ++ G+ IH +K + G L+D
Sbjct: 192 LDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR-SKGVILNSFV 314
Y KC + A + F + + + SW+++I+G R +A++ F ++ S G+ + +
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE 374
T++ AC+++ + +G VH + G+ +A++ MY+KCG ++ A + F I
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 375 KPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ 433
+ W A++ A HG E+++ F +M++ G +PN VTF+ LNAC H+GLV EG++
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 434 FLDSM-SVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWS 492
+ M S +Y + P ++HY CMI + RAGLL EALE++++MP +PD +L C +
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 493 HRNL-ETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
L E ++ DS YV + N+ A WD+ A+ R++M + + K
Sbjct: 489 RGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISK 544
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 10/392 (2%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAER 65
S D ++ +FK CG + +GK H + +M + ++ N ++ Y C A +
Sbjct: 103 SPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACK 162
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VF EM RD+ SW II+ + G A+ FS+M ++P+ + + +L S
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGC 219
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
L LGK +H +++ + L +MY+KC L A ++ K+ V+ ++ G
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 186 YTQALRHTDALLLFAKM-IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
R +A+ LF+ M G+K D + + VL ACA+L ++ GR +H Y + G++
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+ +GT +VD Y+KCG E A + F IR N F+W+A++ G G ++L F+ +
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK---GLVQYLSGESAMITMYSKCG 361
G N + AC + LV + + +K L L MI + + G
Sbjct: 400 KLGFKPNLVTFLAALNACCH-TGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 362 KLDYAYQAFLTIE-KPDTIAWTAIICAYAYHG 392
LD A + + KPD AI+ A G
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSACKNRG 490
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 202/446 (45%), Gaps = 21/446 (4%)
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLI-RIGFTADVSIETTLSNMYIKCGWLDGAEV 166
P S+ L+ + S+L + KQ+ +QLI R D+ I ++ + + + V
Sbjct: 4 PEKSVLLELI---SRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSV 60
Query: 167 ATNKM-TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
+ + + ++ + L+ Y + + + + G D F F V KAC
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFS 120
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIIT 285
I G+QIH K+G ++ V LV FY CG AC+ F + + SW+ IIT
Sbjct: 121 GIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIIT 180
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
G+ ++G + +AL+TF + V N Y + + + L G +H +K+ +
Sbjct: 181 GFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI 237
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKM- 403
L +A+I MY KC +L A + F +EK D ++W ++I + +S EA+ LF M
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGK---QFLDSMSVKYGVDPTIDHYNCMIGVYSR 460
SG++P+ +L+AC+ G V G+ +++ + +K+ D I ++ +Y++
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW--DTHIG--TAIVDMYAK 353
Query: 461 AGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH-RNLETASIAAGKI-FHLDPLDSATYV 518
G ++ ALE+ + + +W LLGG H LE+ + P + T++
Sbjct: 354 CGYIETALEIFNGIR-SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKP-NLVTFL 411
Query: 519 TMFNLHALAGNWDEAAQYRKMMAERN 544
N G DE +Y M R
Sbjct: 412 AALNACCHTGLVDEGRRYFHKMKSRE 437
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 206/369 (55%), Gaps = 1/369 (0%)
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
+ +GY++ DAL+++ M+ ++ F S+ LKAC LKD+ GR IH+ VK
Sbjct: 206 AMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKR 265
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
+ + V L+ Y + G F+ A + F+ + E N +W+++I+ + R + F
Sbjct: 266 KEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLF 325
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKC 360
+ ++ + + + T I ACS ++ L+ G ++HA +K + ++++ MY KC
Sbjct: 326 RKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLL 419
G+++Y+ + F + D +W ++ YA +G E + LF M+ SGV P+ +TF+ LL
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD 479
+ CS +GL + G + M ++ V P ++HY C++ + RAG ++EA+++I +MPF+P
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPS 505
Query: 480 TLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
W +LL C H N+ IAA ++F L+P + YV + N++A A WD + R+M
Sbjct: 506 ASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREM 565
Query: 540 MAERNLRKE 548
M +R ++KE
Sbjct: 566 MKQRGVKKE 574
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 179/394 (45%), Gaps = 18/394 (4%)
Query: 4 ACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAA 63
ACIS +S H K+C ++ L++ L HN K + ++ ++ C+ A
Sbjct: 140 ACIS--AKSLHHGIKICSLI--LNNPSLRHN--------PKLLSK-LITLFSVCRRLDLA 186
Query: 64 ERVFDEMVDRDLFS---WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSF 120
++FD++ D L + WA + Y+ G A+ ++ ML I+P + L +
Sbjct: 187 RKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKAC 246
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
D L +G+ +H+Q+++ D + L +Y++ G D A + M+ +N V
Sbjct: 247 VDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWN 306
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
L+ ++ +R + LF KM +E + + +L AC+ + + TG++IH+ +K
Sbjct: 307 SLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS 366
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
+ +V + L+D Y KCG E + + F+ + + SW+ ++ Y +G ++ + F
Sbjct: 367 KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLF 426
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ-YLSGESAMITMYSK 359
+ + GV + + + CS YG + + V L + ++ + +
Sbjct: 427 EWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGR 486
Query: 360 CGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHG 392
GK+ A + T+ KP W +++ + HG
Sbjct: 487 AGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 248/545 (45%), Gaps = 87/545 (15%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIF------CTLLGSFADPSALE 127
DL W +I+ A G A+ L+ M G+ I C LG F
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFG------ 175
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYT 187
L + H+Q+I+IG ++ + L +Y K G + A +M +N ++ ++ G++
Sbjct: 176 LCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFS 235
Query: 188 QALRHTDALLLFAKMIKEGVKLDEFVFSIVLK---------------------------- 219
Q A+ +F M +E K DE ++ VL
Sbjct: 236 QEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 220 -------ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
CA L+ ++ ++H Y +K G E + L+ Y K G+ + A F I
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFK-------------------------NIRSKG 307
R SW+++IT + +G+ D+AL F N++ +G
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 308 --------------VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
V+ NS I C+ + L G ++H I+ + + + ++A+
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNA 412
+ MY+KCG L F I D I+W +II Y HG +E A+ +F +M+ SG P+
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
+ + +L+ACSH+GLV++G++ SMS ++G++P +HY C++ + R G L+EA E+++
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Query: 473 SMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDE 532
+MP EP LL C H+N++ A A ++ L+P + +Y+ + N+++ G W+E
Sbjct: 596 NMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEE 655
Query: 533 AAQYR 537
+A R
Sbjct: 656 SANVR 660
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 178/455 (39%), Gaps = 93/455 (20%)
Query: 130 KQLHSQLIRIGFT-ADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
+Q+H+Q++ F S+ L ++Y + G L A N T + V + L + +
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDAR---NVFETVSLVLLSDLRL-WNS 128
Query: 189 ALR-------HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
L+ + +AL L+ M + G+ D ++ ++L+AC L R H+ +++G
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG 188
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQS----------- 290
L+ + V L+ Y K GR A F + N SW+ +I G+ Q
Sbjct: 189 LKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFE 248
Query: 291 ------------------------GRFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS 326
G+F+ L+ F +R G ++ F C+ +
Sbjct: 249 WMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELE 308
Query: 327 DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIIC 386
L +VH IK G +YL +A+I +Y K GK+ A F I +W ++I
Sbjct: 309 ALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLIT 368
Query: 387 AYAYHGK-SEAVKLFHKMLR----SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMS-- 439
++ GK EA+ LF ++ V+ N VT+ ++ C+ G + ++ M
Sbjct: 369 SFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFS 428
Query: 440 --------------------------------VKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
++ + I N ++ +Y++ GLL E
Sbjct: 429 KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEG 488
Query: 468 ---LEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA 499
E IR + D +SW +++ G H E A
Sbjct: 489 SLVFEAIR----DKDLISWNSIIKGYGMHGFAEKA 519
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 251/510 (49%), Gaps = 37/510 (7%)
Query: 76 FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQ 135
W +I++YA+ I + RM+ GI+P + + ++L + + + G+ +H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 136 LIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDA 195
+ + + + + L +MY + + A ++M ++AV+ ++ Y ++A
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 196 LLLFAKMIKEGVK-----------------------------------LDEFVFSIVLKA 220
LF KM GV+ LD I LKA
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 221 CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSW 280
C+ + I G++IH ++ + +V L+ YSKC A F E + +W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 281 SAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIK 340
++II+GY Q + ++A + + G NS +I C+ I++L +G + H ++
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 341 KGLVQ-YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVK 398
+ + Y ++++ +Y+K GK+ A Q + K D + +T++I Y G+ A+
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVY 458
LF +M RSG++P+ VT + +L+ACSHS LV EG++ M +YG+ P + H++CM+ +Y
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 459 SRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYV 518
RAG L +A ++I +MP++P +W TLL C H N + AA K+ + P + YV
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYV 589
Query: 519 TMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
+ N++A AG+W + A+ R +M + ++K+
Sbjct: 590 LIANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 186/439 (42%), Gaps = 53/439 (12%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
I D +Y + K CG ++ G++ H ++ + + ++ N ++ MY ++ A
Sbjct: 140 IRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIAR 199
Query: 65 RVFDEMVDRDLFSWATIISAYAEEG----------------------------------- 89
R+FD M +RD SW +I+ YA EG
Sbjct: 200 RLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Query: 90 HMIGAIRLFSRMLDL--GIKPSSSIF----CTLLGSFADPSALELGKQLHSQLIRIGFTA 143
+ +GA+ L SRM + + P + I C+L+G A+ LGK++H I +
Sbjct: 260 NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIG------AIRLGKEIHGLAIHSSYDG 313
Query: 144 DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI 203
++ TL MY KC L A + + + ++ GY Q + +A L +M+
Sbjct: 314 IDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREML 373
Query: 204 KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG-LESEVSVGTPLVDFYSKCGRF 262
G + + + +L CA + ++ G++ H Y ++ + + LVD Y+K G+
Sbjct: 374 VAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI 433
Query: 263 EAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQAC 322
AA Q + + + ++ +++++I GY G AL FK + G+ + + AC
Sbjct: 434 VAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSAC 493
Query: 323 SAISDLVYGAQ--VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTI 379
S S LV+ + + G+ L S M+ +Y + G L A + KP
Sbjct: 494 SH-SKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA 552
Query: 380 AWTAIICAYAYHGKSEAVK 398
W ++ A HG ++ K
Sbjct: 553 TWATLLNACHIHGNTQIGK 571
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 38/309 (12%)
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
+L AC ++ G Q+H++ + G+E + LV FYS A E+ +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
W+ +I Y ++ F++ + +K + SKG+ ++F Y ++ +AC D+ +G VH
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SE 395
L +A+I+MY + + A + F + + D ++W A+I YA G SE
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 396 AVKLFHKMLRSGVRPNAVTF----------------IGL-------------------LN 420
A +LF KM SGV + +T+ +GL L
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
ACS G ++ GK+ + +++ D + N +I +YS+ L+ AL + R E
Sbjct: 289 ACSLIGAIRLGKE-IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE-ENSL 346
Query: 481 LSWKTLLGG 489
+W +++ G
Sbjct: 347 CTWNSIISG 355
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 49/244 (20%)
Query: 291 GRFDKALETFKNIR-------SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL 343
G A +TF +R S ++L+S ++ AC + + G QVHA I G+
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHS--AASLLSACVDVRAFLAGVQVHAHCISSGV 74
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD---TIAWTAIICAYAYHGK-SEAVKL 399
+ ++T YS + +A IE D + W +I +YA + E +
Sbjct: 75 EYHSVLVPKLVTFYS---AFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAA 131
Query: 400 FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK------YGVDPTIDHY-- 451
+ +M+ G+RP+A T+ +L AC + V G+ S+ V Y + I Y
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKR 191
Query: 452 ----------------------NCMIGVYSRAGLLQEALEMIRSMPF---EPDTLSWKTL 486
N +I Y+ G+ EA E+ M F E ++W +
Sbjct: 192 FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNII 251
Query: 487 LGGC 490
GGC
Sbjct: 252 SGGC 255
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 226/425 (53%), Gaps = 8/425 (1%)
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
LH+ +++GF +D L Y+K ++ A ++M N V+ T ++ GY +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 192 HTDALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
+AL +F KM ++ V +E+ F+ V KAC+AL + G+ IH+ GL + V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 251 PLVDFYSKCGRFEAACQAFESI--REPNDFSWSAIITGYCQSGRFDKALETFKNIRS--K 306
LVD Y KC E A + F+S+ N SW+++IT Y Q+ R +A+E F++ +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
N F+ ++ ACS++ L +G H + G ++++ MY+KCG L A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHGKSEA-VKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
+ FL I I++T++I A A HG EA VKLF +M+ + PN VT +G+L+ACSHS
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF--EPDTLSW 483
GLV EG ++L M+ KYGV P HY C++ + R G + EA E+ +++ E L W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 484 KTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
LL H +E S A+ ++ + ++ Y+ + N +A++G W+++ R M
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 544 NLRKE 548
KE
Sbjct: 471 GNVKE 475
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 190/395 (48%), Gaps = 13/395 (3%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
+ F N ++ Y K A ++FDEM + ++ SW ++IS Y + G A+ +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 103 -DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL 161
D + P+ F ++ + + + +GK +H++L G ++ + ++L +MY KC +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 162 DGAEVATNKMT--TKNAVACTGLMVGYTQALRHTDALLLF----AKMIKEGVKLDEFVFS 215
+ A + M +N V+ T ++ Y Q R +A+ LF A + + + ++F+ +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSD--RANQFMLA 240
Query: 216 IVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
V+ AC++L + G+ H + G ES V T L+D Y+KCG A + F IR
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQ-V 334
+ S++++I + G + A++ F + + + N + ACS + G + +
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE---KPDTIAWTAIICAYAYH 391
A K G+V + ++ M + G++D AY+ TIE + + W A++ A H
Sbjct: 361 SLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
Query: 392 GKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
G+ E V K L + +I L NA + SG
Sbjct: 421 GRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSG 455
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 163/361 (45%), Gaps = 58/361 (16%)
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
LL +K G D F + ++ + LK+INT R++
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKL----------------------- 86
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS-KGVILNSFVY 315
F+ + EPN SW+++I+GY G+ AL F+ + + V N + +
Sbjct: 87 ------------FDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTF 134
Query: 316 TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI-- 373
++F+ACSA+++ G +HA GL + + S+++ MY KC ++ A + F ++
Sbjct: 135 ASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIG 194
Query: 374 EKPDTIAWTAIICAYAYHGKS-EAVKLFHKM--LRSGVRPNAVTFIGLLNACSHSGLVKE 430
+ ++WT++I AYA + + EA++LF + R N +++ACS G ++
Sbjct: 195 YGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQW 254
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
GK + + G + ++ +Y++ G L A ++ + +S+ +++
Sbjct: 255 GK-VAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS-VISYTSMIMAK 312
Query: 491 WSHRNLETA-----SIAAGKIFHLDPLDSATYVTMFN-LHAL--AGNWDEAAQYRKMMAE 542
H E A + AG+I + YVT+ LHA +G +E +Y +MAE
Sbjct: 313 AKHGLGEAAVKLFDEMVAGRI-------NPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 365
Query: 543 R 543
+
Sbjct: 366 K 366
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 14/320 (4%)
Query: 8 IDPRSYK--HLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
+ P Y +FK C L GK H RL+ N + + ++ MY C A
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETAR 186
Query: 65 RVFDEMVD--RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI---KPSSSIFCTLLGS 119
RVFD M+ R++ SW ++I+AYA+ AI LF R + + + + + +++ +
Sbjct: 187 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISA 245
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+ L+ GK H + R G+ ++ + T+L +MY KCG L AE ++ + ++
Sbjct: 246 CSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISY 305
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY-SV 238
T +++ + A+ LF +M+ + + VL AC+ +N G + S +
Sbjct: 306 TSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 365
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR---EPNDFSWSAIITGYCQSGRFDK 295
K G+ + T +VD + GR + A + ++I E W A+++ GR +
Sbjct: 366 KYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEI 425
Query: 296 ALETFKN-IRSKGVILNSFV 314
E K I+S + ++++
Sbjct: 426 VSEASKRLIQSNQQVTSAYI 445
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 278/581 (47%), Gaps = 53/581 (9%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERVFDEM 70
++ L K C LG + G++ H ++ + + F ++ MY K T A +V DEM
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
+R + S +S E G A R+F G +S ++LG D +E G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGGM 149
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCG-WLDGA----EVATNKMTTKNAVACTGLMVG 185
QLH ++ GF +V + T+L +MY +CG W+ A +V + T NA +GLM
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF-ISGLMEN 208
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
L + L K E + ++ F + ACA+L ++ GRQ+H +K + E
Sbjct: 209 GVMNLVPS-VFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 246 VSVGTPLVDFYSKC--------------------------------GRFEAACQAFESIR 273
VGT L+D YSKC G+ E A + FE +
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 274 ----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
+P+ +W+++I+G+ Q G+ +A + F+ + S ++ + T++ ACS I L
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KP-DTIAWTAIICA 387
G ++H IK + + +++I MY KCG +A + F E KP D + W +I
Sbjct: 386 NGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 388 YAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
Y HG+ E A+++F + V P+ TF +L+ACSH G V++G Q M +YG P
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKI 506
+ +H CMI + R+G L+EA E+I M ++ +LLG C H + AA K+
Sbjct: 506 STEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKL 564
Query: 507 FHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
L+P + A +V + +++A W++ R+++ ++ L K
Sbjct: 565 AELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVK 605
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 206/477 (43%), Gaps = 46/477 (9%)
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P+ F LL S A + G+ LH+Q+++ GF DV T L +MY+K + A
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
++M + + + G + DA +F G ++ + VL C DI
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DI 145
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
G Q+H ++K G E EV VGT LV YS+CG + A + FE + + +++A I+G
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 288 CQSGRFDKALETFKNIRS-KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
++G + F +R N + N AC+++ +L YG Q+H +KK
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIE-------------------------------- 374
+A+I MYSKC AY F ++
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 375 ----KPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVK 429
KPD+ W ++I ++ GK EA K F +ML + P+ LL+ACS +K
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI-RSMPFEPDTLSWKTLLG 488
GK+ + +K + I +I +Y + GL A + R P D + W ++
Sbjct: 386 NGKE-IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 489 GCWSHRNLETASIAAGKIFHLDPLDS--ATYVTMFNLHALAGNWDEAAQYRKMMAER 543
G H E+A I ++ + ++ AT+ + + + GN ++ +Q ++M E
Sbjct: 445 GYGKHGECESA-IEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEE 500
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 254/509 (49%), Gaps = 37/509 (7%)
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
L + ++ + A+ + LF + G+ P + +L S + G+++H
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
++ G D + +L MY G ++ ++M ++ V+ GL+ Y R D
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 195 ALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
A+ +F +M +E +K DE L AC+ALK++ G +I+ + V E V +G LV
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALV 189
Query: 254 DFYSKCGRFEAACQAFESIREPND-------------------------------FSWSA 282
D + KCG + A F+S+R+ N W+A
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
++ GY Q RFD+ALE F+ +++ G+ ++FV ++ C+ L G +H +
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFH 401
+ +A++ MY+KCG ++ A + F I++ DT +WT++I A +G S A+ L++
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 402 KMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
+M GVR +A+TF+ +L AC+H G V EG++ SM+ ++ V P +H +C+I + RA
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 462 GLLQEALEMIRSMPFEPD-TL--SWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYV 518
GLL EA E+I M E D TL + +LL ++ N++ A A K+ ++ DS+ +
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHT 489
Query: 519 TMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+ +++A A W++ R+ M + +RK
Sbjct: 490 LLASVYASANRWEDVTNVRRKMKDLGIRK 518
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 34/359 (9%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM- 101
+ ++ N ++ MY +VFDEM RD+ SW +IS+Y G AI +F RM
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 102 LDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL 161
+ +K + L + + LE+G++++ + + F V I L +M+ KCG L
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCL 198
Query: 162 DGAEVATNKMTTKN-------------------------------AVACTGLMVGYTQAL 190
D A + M KN V T +M GY Q
Sbjct: 199 DKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFN 258
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
R +AL LF M G++ D FV +L CA + G+ IH Y + + + VGT
Sbjct: 259 RFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT 318
Query: 251 PLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL 310
LVD Y+KCG E A + F I+E + SW+++I G +G +AL+ + + + GV L
Sbjct: 319 ALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRL 378
Query: 311 NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE-SAMITMYSKCGKLDYAYQ 368
++ + + AC+ + G ++ ++ VQ S S +I + + G LD A +
Sbjct: 379 DAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEE 437
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 35/275 (12%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSR----- 100
I N ++ M+C C A VFD M D+++ W +++ Y G + A LF R
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 101 --------------------------MLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
M GI+P + + +LL A ALE GK +H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
+ T D + T L +MY KCG ++ A ++ ++ + T L+ G
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-HSYSVKLGLESEVSVGTPLV 253
AL L+ +M GV+LD F VL AC + GR+I HS + + ++ + + L+
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC 288
D + G + A + + +R +D ++ YC
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESD---ETLVPVYC 455
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 138/282 (48%), Gaps = 14/282 (4%)
Query: 272 IREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
++ P+ ++ ++ F K L F +R +G+ ++F + ++ + ++ G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 332 AQVHADAIKKGLV--QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYA 389
+VH A+K GL Y+S ++++ MY+ GK++ ++ F + + D ++W +I +Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVS--NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 390 YHGKSE-AVKLFHKMLR-SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPT 447
+G+ E A+ +F +M + S ++ + T + L+ACS ++ G++ + ++ +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 448 IDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIF 507
I N ++ ++ + G L +A + SM + + W +++ G S ++ A + +F
Sbjct: 184 IG--NALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEARV----LF 236
Query: 508 HLDPL-DSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
P+ D + M N + +DEA + + M +R +
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD 278
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 200/356 (56%), Gaps = 5/356 (1%)
Query: 199 FAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSK 258
+ +M+ V + F+ V+K+CA L + G+ +H ++V G + V LV FYSK
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 259 CGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNI 318
CG E A Q F+ + E + +W+++++G+ Q+G D+A++ F +R G +S + ++
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 319 FQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDT 378
AC+ + G+ VH I +GL + +A+I +YS+CG + A + F +++ +
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 379 IAWTAIICAYAYHG-KSEAVKLFHKMLRS-GVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
AWTA+I AY HG +AV+LF+KM G PN VTF+ +L+AC+H+GLV+EG+
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS---WKTLLGGCWSH 493
M+ Y + P ++H+ CM+ + RAG L EA + I + + W +LG C H
Sbjct: 335 RMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Query: 494 RNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
RN + A ++ L+P + +V + N++AL+G DE + R M NLRK+V
Sbjct: 395 RNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQV 450
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 182/395 (46%), Gaps = 6/395 (1%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
++ + C ++ +F + D F + ++I + ++ + + + RML + PS
Sbjct: 47 LITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPS 106
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
+ F +++ S AD SAL +GK +H + GF D ++ L Y KCG ++GA +
Sbjct: 107 NYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFD 166
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+M K+ VA L+ G+ Q +A+ +F +M + G + D F +L ACA ++
Sbjct: 167 RMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSL 226
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
G +H Y + GL+ V +GT L++ YS+CG A + F+ ++E N +W+A+I+ Y
Sbjct: 227 GSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGT 286
Query: 290 SGRFDKALETFKNIRSK-GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYL 347
G +A+E F + G I N+ + + AC+ + G V+ K L+ +
Sbjct: 287 HGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGV 346
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIA----WTAIICAYAYHGKSEAVKLFHKM 403
M+ M + G LD AY+ ++ WTA++ A H + K
Sbjct: 347 EHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKR 406
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
L + N + L N + SG E D M
Sbjct: 407 LIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 19/311 (6%)
Query: 7 SIDPRSYK--HLFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAA 63
++ P +Y + K C L AL GK H G + ++ ++ Y C A
Sbjct: 102 NVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGA 161
Query: 64 ERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
+VFD M ++ + +W +++S + + G AI++F +M + G +P S+ F +LL + A
Sbjct: 162 RQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQT 221
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
A+ LG +H +I G +V + T L N+Y +CG + A +KM N A T ++
Sbjct: 222 GAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMI 281
Query: 184 VGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIH-----SYS 237
Y A+ LF KM + G + F VL ACA + GR ++ SY
Sbjct: 282 SAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYR 341
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS----WSAIITGYCQSGR- 292
+ G+E V +VD + G + A + + + W+A++ G C+ R
Sbjct: 342 LIPGVEHHVC----MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML-GACKMHRN 396
Query: 293 FDKALETFKNI 303
+D +E K +
Sbjct: 397 YDLGVEIAKRL 407
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 273/580 (47%), Gaps = 99/580 (17%)
Query: 20 CGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
CG + L + KLF M + + F N ++ Y + A +F++M +R+ SW
Sbjct: 115 CGGIRFLEEARKLF----DEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSI-------------------------- 112
+ +I+ + + G + A+ LF +M +K SS +
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKM---PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 113 ----------FCTLLGSFADPSALELGKQLHSQL-----------IRIGFTADVSIETTL 151
+ TL+ + +E + L Q+ R F +V ++
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 152 SNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDE 211
Y+K G + A + ++M ++ ++ ++ GY R DA LF++M
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM--------- 338
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFES 271
R HS+++ +V Y+ G E A FE
Sbjct: 339 -----------------PNRDAHSWNM-------------MVSGYASVGNVELARHYFEK 368
Query: 272 IREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
E + SW++II Y ++ + +A++ F + +G + T++ A + + +L G
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAY 390
Q+H +K ++ + +A+ITMYS+CG++ + + F ++ K + I W A+I YA+
Sbjct: 429 MQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAF 487
Query: 391 HGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK-QFLDSMSVKYGVDPTI 448
HG SEA+ LF M +G+ P+ +TF+ +LNAC+H+GLV E K QF+ MSV Y ++P +
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV-YKIEPQM 546
Query: 449 DHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH 508
+HY+ ++ V S G +EA+ +I SMPFEPD W LL C + N+ A +AA +
Sbjct: 547 EHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSR 606
Query: 509 LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
L+P S YV ++N++A G WDEA+Q R M + ++KE
Sbjct: 607 LEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKE 646
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 218/507 (42%), Gaps = 55/507 (10%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A +F+++ R+ +W T+IS Y + M A +LF D+ K + T++ +
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF----DVMPKRDVVTWNTMISGYVS 114
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
+ ++ + S T +S Y K + A + KM +NAV+ + +
Sbjct: 115 CGGIRFLEEARKLFDEMPSRDSFSWNTMISG-YAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 183 MVGYTQALRHTDALLLFAKM-IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
+ G+ Q A++LF KM +K+ L V ++ + G+ S+ G
Sbjct: 174 ITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQY---GSLVSG 230
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESI------------RE---PNDFSWSAIITG 286
E V L+ Y + G+ EAA F+ I RE N SW+++I
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290
Query: 287 YCQSGRFDKALETFKNIRSKGVI-----LNSFVYTNIFQACSAISDLVYGAQVHADAIKK 341
Y + G A F ++ + I ++ +V+ + + A+ + H+
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS----- 345
Query: 342 GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLF 400
+ M++ Y+ G ++ A F + T++W +II AY + EAV LF
Sbjct: 346 --------WNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLF 397
Query: 401 HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSR 460
+M G +P+ T LL+A + ++ G Q + + VK V P + +N +I +YSR
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ-MHQIVVK-TVIPDVPVHNALITMYSR 455
Query: 461 AGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA-----SIAAGKIFHLDPLDSA 515
G + E+ + M + + ++W ++GG H N A S+ + I+
Sbjct: 456 CGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYP----SHI 511
Query: 516 TYVTMFNLHALAGNWDEA-AQYRKMMA 541
T+V++ N A AG DEA AQ+ MM+
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSMMS 538
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 176/447 (39%), Gaps = 69/447 (15%)
Query: 153 NMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEF 212
N I+ G++ A K+ +N V ++ GY + A LF M K V
Sbjct: 48 NQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNT 107
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
+ S + +C ++ + R++ ++ S T ++ Y+K R A FE +
Sbjct: 108 MISGYV-SCGGIRFLEEARKLFD---EMPSRDSFSWNT-MISGYAKNRRIGEALLLFEKM 162
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSK----------GVILN------SFVYT 316
E N SWSA+ITG+CQ+G D A+ F+ + K G+I N ++V
Sbjct: 163 PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 317 NIFQACSAISDLVYG-----------AQV-----------------HADAIKKGLVQYLS 348
S DLVY QV H ++ + +
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSG 407
++MI Y K G + A F ++ DTI+W +I Y + + E A LF +M
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM---- 338
Query: 408 VRPN--AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
PN A ++ +++ + G V+ + + + K+ V +N +I Y + +
Sbjct: 339 --PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYK 391
Query: 466 EALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFN 522
EA+++ M E PD + +LL NL + D + +
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALIT 451
Query: 523 LHALAGNWDEAAQYRKMMAERNLRKEV 549
+++ G E + R++ E L++EV
Sbjct: 452 MYSRCG---EIMESRRIFDEMKLKREV 475
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFD 68
DP + L L L G H + + + + N ++ MY C + R+FD
Sbjct: 408 DPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 69 EM-VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
EM + R++ +W +I YA G+ A+ LF M GI PS F ++L + A ++
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVD 527
Query: 128 LGK 130
K
Sbjct: 528 EAK 530
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 237/511 (46%), Gaps = 74/511 (14%)
Query: 108 PSSSIFCTLLGSFAD--PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
P ++F LLG D P L + +HS++I + S+ L Y + A
Sbjct: 38 PQETVF--LLGQVLDTYPDIRTL-RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASAR 94
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
+++ +N + ++ Y + + + +F M V+ D + F VLKAC+
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG------------------------- 260
I GR+IH + K+GL S + VG LV Y KCG
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 261 ------RFEAA---CQAFESIREPND---------------------------------- 277
RF+ A C+ ES++ +D
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
SW+ +I Y ++ +A+E + + + G ++ T++ AC S L G ++H
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EA 396
+K L+ L E+A+I MY+KCG L+ A F ++ D ++WTA+I AY + G+ +A
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
V LF K+ SG+ P+++ F+ L ACSH+GL++EG+ M+ Y + P ++H CM+
Sbjct: 395 VALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 454
Query: 457 VYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSAT 516
+ RAG ++EA I+ M EP+ W LLG C H + + +AA K+F L P S
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Query: 517 YVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
YV + N++A AG W+E R +M + L+K
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 176/406 (43%), Gaps = 45/406 (11%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAE 64
+ D ++ + K C G + G+ H ++ + F+ N ++ MY C + A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
V DEM RD+ SW +++ YA+ A+ + M + I + +LL +
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA----- 250
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
VS TT + MY+K + KM K+ V+ ++
Sbjct: 251 --------------------VSNTTTENVMYVKDMFF--------KMGKKSLVSWNVMIG 282
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
Y + +A+ L+++M +G + D + VL AC ++ G++IH Y + L
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+ + L+D Y+KCG E A FE+++ + SW+A+I+ Y SGR A+ F ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGA---QVHADAIKKGLVQYLSGESAMITMYSKCG 361
G++ +S + ACS L G ++ D K + L + M+ + + G
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK--ITPRLEHLACMVDLLGRAG 460
Query: 362 KLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE-----AVKLFH 401
K+ AY+ + +P+ W A++ A H ++ A KLF
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 169/625 (27%), Positives = 279/625 (44%), Gaps = 99/625 (15%)
Query: 20 CGMLGALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAAERVF----------- 67
C ++ G+ H R L+ + N +I N +L MY C+ AE VF
Sbjct: 51 CASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASF 110
Query: 68 --------------------DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
D M +R S+ T+I YA+ A+ LF M +LGI
Sbjct: 111 NIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIM 170
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
+ T++ + + + + L S I++ V + T L +MY C L A
Sbjct: 171 LNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKL 230
Query: 168 TNKMTTKNAVACTGLMVGYTQA----------------------------LRHT---DAL 196
++M +N V ++ GY++A LR +AL
Sbjct: 231 FDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEAL 290
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
+ + +M++ G+K E + +L A A + G Q+H VK G + + ++ FY
Sbjct: 291 VYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFY 350
Query: 257 S-------------------------------KCGRFEAACQAFESIREPNDFSWSAIIT 285
+ K G E A + F+ + + FSW+A+I+
Sbjct: 351 AVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMIS 410
Query: 286 GYCQSGRFDKALETFKN-IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
GY QS AL F+ I S V ++ ++F A S++ L G + H +
Sbjct: 411 GYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP 470
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAF---LTIEKPDTIAWTAIICAYAYHGKSE-AVKLF 400
+ +A+I MY+KCG ++ A F I W AIIC A HG ++ A+ L+
Sbjct: 471 PNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLY 530
Query: 401 HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSR 460
+ ++PN++TF+G+L+AC H+GLV+ GK + +SM +G++P I HY CM+ + +
Sbjct: 531 SDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 590
Query: 461 AGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTM 520
AG L+EA EMI+ MP + D + W LL +H N+E A +AA ++ +DP V +
Sbjct: 591 AGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVML 650
Query: 521 FNLHALAGNWDEAAQYRKMMAERNL 545
N++A AG W++ A R+ M R++
Sbjct: 651 SNVYADAGRWEDVALVREEMRTRDV 675
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 209/474 (44%), Gaps = 98/474 (20%)
Query: 117 LGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE----------- 165
LGS A + + G+Q+H ++++ G ++ I ++ NMY KC L AE
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 166 ----------VATNK----------MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE 205
V + + M ++ V+ T L+ GY Q + ++A+ LF +M
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 206 GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAA 265
G+ L+E + V+ AC+ L I R + S ++KL LE V V T L+ Y C + A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 266 CQAFESIREPNDFSWSAIITGYCQSGRFDKALETF-----KNIRSKGVILNSFV------ 314
+ F+ + E N +W+ ++ GY ++G ++A E F K+I S G +++ +
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 315 -----YTNIFQACSAISDLVY---------------GAQVHADAIKKGLVQY-------- 346
YT + + S+++ G Q+H +K+G Y
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 347 -----------------------LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
++ +A+I + K G ++ A + F D +W A
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 384 IICAYAYHGKSE-AVKLFHKMLRSG-VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
+I YA + A+ LF +M+ S V+P+A+T + + +A S G ++EGK+ D ++
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 442 YGVDPTIDHYNCMIGVYSRAGLLQEALEMI-RSMPFEPDTLS-WKTLLGGCWSH 493
+ P + +I +Y++ G ++ AL + ++ T+S W ++ G +H
Sbjct: 468 -TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 227/483 (46%), Gaps = 52/483 (10%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N ++ Y C + AER+F + D+ SW II A A+ + + A++LF M + G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P+ + ++LG + L G+Q+H LI+ G + + L + Y KCG L+ + +
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 168 TNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI 227
+ + KN V L+ GY L LF +M++ G + E+ FS LK+C +
Sbjct: 374 FDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----V 428
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLV--------------------------------DF 255
+Q+HS V++G E V + L+
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY 315
YS+ G++ + + ++ +P+ SW+ I +S ++ +E FK++ + + + +
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 316 TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA-------MITMYSKCGKLDYAYQ 368
+I CS + DL G+ +H GL+ A +I MY KCG + +
Sbjct: 549 VSILSLCSKLCDLTLGSSIH------GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMK 602
Query: 369 AFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
F + + I WTA+I HG EA++ F + L G +P+ V+FI +L AC H G+
Sbjct: 603 VFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGM 662
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
VKEG M YGV+P +DHY C + + +R G L+EA +IR MPF D W+T L
Sbjct: 663 VKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Query: 488 GGC 490
GC
Sbjct: 722 DGC 724
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 226/478 (47%), Gaps = 39/478 (8%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
++ N I+ +Y + A +VFD+M +R+ S+ TII Y++ G + A +FS M
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 105 GIKPSSSIFCTLLGSFADPSALEL--GKQLHSQLIRIG-FTADVSIETTLSNMYIKCGWL 161
G P+ S LL ++L++ G QLH ++ G F AD + T L +Y + L
Sbjct: 110 GYLPNQSTVSGLLSC----ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 162 DGAEVATNKMTTKNAVACTGLM--VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
+ AE M K+ +M +G+ L+ + + F ++++ G L E F VLK
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMMSLLGHRGFLK--ECMFFFRELVRMGASLTESSFLGVLK 223
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS 279
+ +KD++ +Q+H + K GL+ E+SV L+ Y KCG A + F+ + S
Sbjct: 224 GVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAI 339
W+AII +S KAL+ F ++ G N Y ++ S + L G Q+H I
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 340 KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKL 399
K G + +A+I Y+KCG L+ + F I + + W A++ YA + L
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSL 403
Query: 400 FHKMLRSGVRPNAVTFIGLLNACS-------HSGLVKEGKQ----FLDSMSVKYGVD--- 445
F +ML+ G RP TF L +C HS +V+ G + L S+ Y +
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 446 ------------PT-IDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
PT + N + G+YSR G E++++I ++ +PDT+SW + C
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 19/321 (5%)
Query: 217 VLKACAALKDINTGRQIHSYSVKLG--LESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
+L C + +H+ S+ L L V V ++ Y K G A + F+ + E
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
N S++ II GY + G DKA F +R G + N + + +C+++ D+ G Q+
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQL 135
Query: 335 HADAIKKGL--VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG 392
H ++K GL G + ++ +Y + L+ A Q F + W ++ + G
Sbjct: 136 HGLSLKYGLFMADAFVG-TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 393 -KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY 451
E + F +++R G +F+G+L S + KQ L + K G+D I
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQ-LHCSATKKGLDCEISVV 253
Query: 452 NCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIF---- 507
N +I Y + G A M + D +SW ++ N + A K+F
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAG-SWDIVSWNAIICATAKSEN----PLKALKLFVSMP 308
Query: 508 -HLDPLDSATYVTMFNLHALA 527
H + TYV++ + +L
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLV 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQR--MANGNKFIDNCILQMYCDCK 58
M ++ I D ++ + +C L L+ G H + + + + F+ N ++ MY C
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
S + +VF+E +++L +W +IS G+ A+ F L LG KP F ++L
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM 171
+ ++ G L ++ G ++ ++ + G+L AE +M
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 206/373 (55%), Gaps = 16/373 (4%)
Query: 191 RHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
R +A +L+ KM++ G D+ F VLKACA + + G+Q+H VK G +V V
Sbjct: 130 RKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVN 189
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
L+ Y CG + A + F+ + E + SW+++I + G +D AL+ F+ ++ +
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFE 248
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG---ESAMITMYSKCGKLDYA 366
+ + ++ AC+ + L G HA ++K V ++++I MY KCG L A
Sbjct: 249 PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMA 308
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKML--RSGVRPNAVTFIGLLNACS 423
Q F ++K D +W A+I +A HG++E A+ F +M+ R VRPN+VTF+GLL AC+
Sbjct: 309 EQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACN 368
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
H G V +G+Q+ D M Y ++P ++HY C++ + +RAG + EA++M+ SMP +PD + W
Sbjct: 369 HRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIW 428
Query: 484 KTLLGGCWSH-RNLETASIAAGKIFHLDPLD-------SATYVTMFNLHALAGNWDEAAQ 535
++LL C ++E + A I + S YV + ++A A W++
Sbjct: 429 RSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGI 488
Query: 536 YRKMMAERNLRKE 548
RK+M+E +RKE
Sbjct: 489 VRKLMSEHGIRKE 501
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 176/375 (46%), Gaps = 20/375 (5%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEE-GHMIGAIRLFSRMLD 103
F+ ILQ+ A RVFD + + F W T+I A A + A L+ +ML+
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 143
Query: 104 LG-IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
G P F +L + A GKQ+H Q+++ GF DV + L ++Y CG LD
Sbjct: 144 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLD 203
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
A ++M ++ V+ ++ + + AL LF +M + + D + VL ACA
Sbjct: 204 LARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACA 262
Query: 223 ALKDINTGRQIHSYSVK---LGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS 279
L ++ G H++ ++ + + +V V L++ Y KCG A Q F+ +++ + S
Sbjct: 263 GLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLAS 322
Query: 280 WSAIITGYCQSGRFDKALETFKNI--RSKGVILNSFVYTNIFQACSAISDLVYGAQ---- 333
W+A+I G+ GR ++A+ F + + + V NS + + AC+ + G Q
Sbjct: 323 WNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDM 382
Query: 334 -VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYH 391
V I+ L Y ++ + ++ G + A +++ KPD + W +++ A
Sbjct: 383 MVRDYCIEPALEHY----GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKK 438
Query: 392 GKSEAVKLFHKMLRS 406
G S V+L ++ R+
Sbjct: 439 GAS--VELSEEIARN 451
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 17/297 (5%)
Query: 7 SIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAER 65
S D ++ + K C + S+GK H ++ + G+ +++N ++ +Y C A +
Sbjct: 148 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 207
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
VFDEM +R L SW ++I A G A++LF R + +P ++L + A +
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REMQRSFEPDGYTMQSVLSACAGLGS 266
Query: 126 LELGKQLHSQLIR---IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
L LG H+ L+R + DV ++ +L MY KCG L AE M ++ + +
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 183 MVGYTQALRHTDALLLFAKMI--KEGVKLDEFVFSIVLKACAALKDINTGRQ-----IHS 235
++G+ R +A+ F +M+ +E V+ + F +L AC +N GRQ +
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSG 291
Y ++ LE + VD ++ G A S+ +P+ W +++ C+ G
Sbjct: 387 YCIEPALEHYGCI----VDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL-------DYAY 367
+ IF SD+ Q+HA ++ + E A + +Y K +L +YA+
Sbjct: 48 HQRIFSLAETCSDMSQLKQLHAFTLRTTYPE----EPATLFLYGKILQLSSSFSDVNYAF 103
Query: 368 QAFLTIEKPDTIAWTAII--CAYAYHGKSEAVKLFHKMLRSG-VRPNAVTFIGLLNACSH 424
+ F +IE + W +I CA+ K EA L+ KML G P+ TF +L AC++
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWK 484
EGKQ + VK+G + N +I +Y G L A ++ MP E +SW
Sbjct: 164 IFGFSEGKQ-VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERSLVSWN 221
Query: 485 TLL 487
+++
Sbjct: 222 SMI 224
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 242/491 (49%), Gaps = 42/491 (8%)
Query: 56 DCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
+ K+ + A + + + + F+ ++I AYA A+ +F ML + P F
Sbjct: 86 EPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTF 145
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
+L + A E G+Q+H I+ G DV +E TL N+Y + G+ + A ++M ++
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD 205
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
AV+ L+ Y + +A LF +M + R + S
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEMEE--------------------------RNVES 239
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
++ ++ Y+ G + A + F+S+ + SW+A++T Y G +++
Sbjct: 240 WNF-------------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNE 286
Query: 296 ALETF-KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMI 354
LE F K + + F ++ AC+++ L G VH K G+ +A++
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 355 TMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAV 413
MYSKCGK+D A + F K D W +II + HG +A+++F +M+ G +PN +
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 414 TFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRS 473
TFIG+L+AC+H G++ + ++ + MS Y V+PTI+HY CM+ + R G ++EA E++
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE 466
Query: 474 MPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA 533
+P + ++ ++LLG C LE A A ++ L+ DS+ Y M NL+A G W++
Sbjct: 467 IPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV 526
Query: 534 AQYRK-MMAER 543
R+ M AER
Sbjct: 527 IDGRRNMRAER 537
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 41/322 (12%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVF 67
D S+ + K C +G+ H + + F++N ++ +Y F A +V
Sbjct: 139 DKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVL 198
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
D M RD SW +++SAY E+G + A LF M + ++ + +
Sbjct: 199 DRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISG------------ 246
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYT 187
Y G + A+ + M ++ V+ ++ Y
Sbjct: 247 ---------------------------YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 188 QALRHTDALLLFAKMIKEGV-KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ + L +F KM+ + K D F VL ACA+L ++ G +H Y K G+E E
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEG 339
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
+ T LVD YSKCG+ + A + F + + + +W++II+ G ALE F + +
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 307 GVILNSFVYTNIFQACSAISDL 328
G N + + AC+ + L
Sbjct: 400 GFKPNGITFIGVLSACNHVGML 421
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 4/179 (2%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKS 59
+D++ D + + C LG+LS G+ H + + F+ ++ MY C
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A VF RD+ +W +IIS + G A+ +FS M+ G KP+ F +L +
Sbjct: 355 IDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIE--TTLSNMYIKCGWLDGAEVATNKMTTKNA 176
L+ ++L + + + + +IE + ++ + G ++ AE N++ A
Sbjct: 415 CNHVGMLDQARKLFEMMSSV-YRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA 472
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 191/326 (58%), Gaps = 2/326 (0%)
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAI 283
+ D+ G IHS ++ G S + V L+ Y+ CG +A + F+ + E + +W+++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 284 ITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL 343
I G+ ++G+ ++AL + + SKG+ + F ++ AC+ I L G +VH IK GL
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHK 402
+ L + ++ +Y++CG+++ A F + ++++WT++I A +G EA++LF
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 403 MLRS-GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
M + G+ P +TF+G+L ACSH G+VKEG ++ M +Y ++P I+H+ CM+ + +RA
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 462 GLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMF 521
G +++A E I+SMP +P+ + W+TLLG C H + + A A +I L+P S YV +
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 522 NLHALAGNWDEAAQYRKMMAERNLRK 547
N++A W + + RK M ++K
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKK 326
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 151/300 (50%), Gaps = 26/300 (8%)
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
+ LG+ +HS +IR GF + + ++ +L ++Y CG + A +KM K+ VA ++ G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
+ + + +AL L+ +M +G+K D F +L ACA + + G+++H Y +K+GL
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
+ L+D Y++CGR E A F+ + + N SW+++I G +G +A+E FK + S
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 306 -KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY------------LSGESA 352
+G++ + I ACS H +K+G + +
Sbjct: 184 TEGLLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGC 232
Query: 353 MITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPN 411
M+ + ++ G++ AY+ ++ +P+ + W ++ A HG S+ + F ++ + PN
Sbjct: 233 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE-FARIQILQLEPN 291
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 6/280 (2%)
Query: 29 GKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE 87
G+ H+ + R G+ ++ N +L +Y +C +A +VFD+M ++DL +W ++I+ +AE
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 88 EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSI 147
G A+ L++ M GIKP +LL + A AL LGK++H +I++G T ++
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 148 ETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKM-IKEG 206
L ++Y +CG ++ A+ ++M KN+V+ T L+VG +A+ LF M EG
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 207 VKLDEFVFSIVLKACAALKDINTGRQ-IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAA 265
+ E F +L AC+ + G + + +E + +VD ++ G+ + A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 266 CQAFESIR-EPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+ +S+ +PN W ++ G D L F I+
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQ 284
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 263/584 (45%), Gaps = 45/584 (7%)
Query: 8 IDPRSYKH--LFKMCGMLGALSDGKLFHNRLQRMANGNK-FIDNCILQMYCDCKSFTAAE 64
+ P Y + C + S G H + + N F+ N ++ +Y D S ++ +
Sbjct: 177 VQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLY-DKDSGSSCD 235
Query: 65 ---RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL-GIKPSSSIFCTLLGSF 120
++FDE+ RD+ SW T++S+ +EG A LF M + G S TLL S
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC---------------------- 158
D S L G++LH + IRIG ++S+ L Y K
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 159 ---------GWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
G +D A +T KN + LM G+ + AL LF M++ GV+L
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF 269
+F + + AC + + QIH + +K G + T L+D ++C R A + F
Sbjct: 416 TDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 270 ESIREPNDFS--WSAIITGYCQSGRFDKALETF-KNIRSKGVILNSFVYTNIFQACSAIS 326
+ D S ++II GY ++G DKA+ F + + + + L+ T I C +
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG 535
Query: 327 DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIIC 386
G Q+H A+K G +S +++I+MY+KC D A + F T+ + D I+W ++I
Sbjct: 536 FREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLIS 595
Query: 387 AYAYH-GKSEAVKLFHKMLRSGVRPNAVTFIGLLNAC--SHSGLVKEGKQFLDSMSVKYG 443
Y EA+ L+ +M ++P+ +T +++A + S + + SM Y
Sbjct: 596 CYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYD 655
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAA 503
++PT +HY + V GLL+EA + I SMP +P+ + LL C H N A A
Sbjct: 656 IEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVA 715
Query: 504 GKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
I P + Y+ N+++ +G W + R+ M ER RK
Sbjct: 716 KLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRK 759
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 242/485 (49%), Gaps = 36/485 (7%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
++ Y +C A +VFDEM RD+ +I A A G+ ++ F M G+K
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
+ I +LL + + E GK +H +++ + +D I ++L +MY K G + A +
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+ ++ V ++ GY + +AL L M G+K D ++ ++ + +++
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN--- 233
Query: 230 GRQIHSYSVKLGLESEVSVGTPL--VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
E +VS L +D Y +P+ SW++II+G
Sbjct: 234 -------------EEKVSEILELMCLDGY-----------------KPDVVSWTSIISGL 263
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
+ + +KA + FK + + G+ NS + AC+ ++ + +G ++H ++ GL +
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRS 406
SA++ MY KCG + A F K T+ + ++I YA HG ++ AV+LF +M +
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEAT 383
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G + + +TF +L ACSH+GL G+ M KY + P ++HY CM+ + RAG L E
Sbjct: 384 GEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVE 443
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHAL 526
A EMI++M EPD W LL C +H N+E A IAA + L+P +S + + +L+A
Sbjct: 444 AYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYAN 503
Query: 527 AGNWD 531
AG+W+
Sbjct: 504 AGSWE 508
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 271/548 (49%), Gaps = 35/548 (6%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQR----MANGNKFIDNCILQMYCDCKSFTAAE 64
D + + MC G+L GK H+ + + +A+ + N ++ MY +C+ A
Sbjct: 189 DKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASS---VVNALITMYFNCQVVVDAC 244
Query: 65 RVFDE--MVDRDLFSWATIISAYA----EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
VF+E + RD ++ +I A +E ++ F +ML+ ++P+ F +++G
Sbjct: 245 LVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLV-----FRKMLEASLRPTDLTFVSVMG 299
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
S S +G Q+H I+ G+ + MY A + K+ V
Sbjct: 300 S---CSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
++ Y QA A+ ++ +M GVK DEF F +L A D++ + + +
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACII 413
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
K GL S++ + L+ YSK G+ E A FE N SW+AII+G+ +G + LE
Sbjct: 414 KFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLE 473
Query: 299 TFKNIRSKGV--ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITM 356
F + V + +++ + + C + S L+ G+Q HA ++ G + +A+I M
Sbjct: 474 RFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINM 533
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSG-VRPNAVT 414
YS+CG + + + F + + D ++W ++I AY+ HG+ E AV + M G V P+A T
Sbjct: 534 YSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAAT 593
Query: 415 FIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI--- 471
F +L+ACSH+GLV+EG + +SM +GV +DH++C++ + RAG L EA ++
Sbjct: 594 FSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKIS 653
Query: 472 -RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNW 530
+++ D W L C +H +L+ + A + + D + YV + N++A AG W
Sbjct: 654 EKTIGSRVDV--WWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMW 711
Query: 531 DEAAQYRK 538
EA + R+
Sbjct: 712 KEAEETRR 719
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 244/545 (44%), Gaps = 67/545 (12%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISA--------YA----------- 86
+ N +L +Y + + ++ FDE+ + D++SW T++SA YA
Sbjct: 94 VSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERD 153
Query: 87 -------------EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
E G+ ++ LF M LG++ F T+L S D +L+ GKQ+H
Sbjct: 154 DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVH 212
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWL-------DGAEVATNKMTTKNAVACTGLMVGY 186
S +I+ GF S+ L MY C + + +VA T N V +
Sbjct: 213 SLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV------IDG 266
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ ++LL+F KM++ ++ + F V+ +C+ G Q+H ++K G E
Sbjct: 267 LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYT 323
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
V + YS F AA + FES+ E + +W+ +I+ Y Q+ A+ +K +
Sbjct: 324 LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII 383
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
GV + F + ++ DL V A IK GL + +A+I+ YSK G+++ A
Sbjct: 384 GVKPDEFTFGSLLATS---LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 367 YQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVR--PNAVTFIGLLNACS 423
F + + I+W AII + ++G E ++ F +L S VR P+A T LL+ C
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500
Query: 424 HSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSW 483
+ + G Q + +++G N +I +YS+ G +Q +LE+ M E D +SW
Sbjct: 501 STSSLMLGSQ-THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSW 558
Query: 484 KTLLGGCWSHRNLETASIA------AGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYR 537
+L+ H E A GK+ P D+AT+ + + + AG +E +
Sbjct: 559 NSLISAYSRHGEGENAVNTYKTMQDEGKVI---P-DAATFSAVLSACSHAGLVEEGLEIF 614
Query: 538 KMMAE 542
M E
Sbjct: 615 NSMVE 619
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 166/365 (45%), Gaps = 48/365 (13%)
Query: 183 MVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
+ G T++ + +AL LFA + + ++ D++ S+ + L+D G Q+H Y+++ G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWS-------------------- 281
L V L+ Y + G + + F+ I EP+ +SW+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 282 ------------AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
A+ITG +SG + ++E F+ + GV + F + I C S L
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS-LD 206
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDT-----IAWTAI 384
+G QVH+ IK G S +A+ITMY C A L E+ D + + +
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNC---QVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 385 ICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
I A + E++ +F KML + +RP +TF+ ++ +CS + + G Q + +++K G
Sbjct: 264 IDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQ-VHGLAIKTGY 319
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
+ N + +YS A ++ S+ E D ++W T++ ++ L ++++
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLE-EKDLVTWNTMISS-YNQAKLGKSAMSVY 377
Query: 505 KIFHL 509
K H+
Sbjct: 378 KRMHI 382
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 198/354 (55%), Gaps = 7/354 (1%)
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
LL ++ + G + D F + ++ A A L + R++ K +V V ++ Y
Sbjct: 103 LLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVPVWNAMITGY 158
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI-RSKGVILNSFVY 315
+ G +AA + F+S+ N SW+ +I+G+ Q+G + +AL+ F + + K V N
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 316 TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI-E 374
++ AC+ + +L G ++ A + G + +A I MYSKCG +D A + F +
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN 278
Query: 375 KPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ 433
+ + +W ++I + A HGK EA+ LF +MLR G +P+AVTF+GLL AC H G+V +G++
Sbjct: 279 QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQE 338
Query: 434 FLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
SM + + P ++HY CMI + R G LQEA ++I++MP +PD + W TLLG C H
Sbjct: 339 LFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH 398
Query: 494 RNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
N+E A IA+ +F L+P + V M N++A WD + RK+M + + K
Sbjct: 399 GNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTK 452
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 167/389 (42%), Gaps = 43/389 (11%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
+LQ + A ++FD + F + +I AY +I L++ + G++PS
Sbjct: 22 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 81
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
F + + A S+ + LHSQ R GF +D TTL Y K G L A +
Sbjct: 82 HHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFD 141
Query: 170 KMTT-------------------------------KNAVACTGLMVGYTQALRHTDALLL 198
+M+ KN + T ++ G++Q +++AL +
Sbjct: 142 EMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKM 201
Query: 199 FAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
F M K+ VK + VL ACA L ++ GR++ Y+ + G + V ++ YS
Sbjct: 202 FLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYS 261
Query: 258 KCGRFEAACQAFESI-REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
KCG + A + FE + + N SW+++I G+ D+AL F + +G ++ +
Sbjct: 262 KCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFV 321
Query: 317 NIFQACSAISDLVYGAQV-----HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFL 371
+ AC +V G ++ I L Y MI + + GKL AY
Sbjct: 322 GLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY----GCMIDLLGRVGKLQEAYDLIK 377
Query: 372 TIE-KPDTIAWTAIICAYAYHGKSEAVKL 399
T+ KPD + W ++ A ++HG E ++
Sbjct: 378 TMPMKPDAVVWGTLLGACSFHGNVEIAEI 406
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM-LDLGI 106
N ++ Y AA +FD M +++ SW T+IS +++ G+ A+++F M D +
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 107 KPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEV 166
KP+ ++L + A+ LE+G++L GF ++ + MY KCG +D A+
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 167 ATNKMTTKNAVACTGLMVGYTQAL-RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
++ + + M+G +H +AL LFA+M++EG K D F +L AC
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 226 DINTGR-------QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPND 277
+ G+ ++H S KL G ++D + G+ + A +++ +P+
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLE-----HYGC-MIDLLGRVGKLQEAYDLIKTMPMKPDA 385
Query: 278 FSWSAIITGYC 288
W ++ G C
Sbjct: 386 VVWGTLL-GAC 395
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 20 CGMLGALSDGKLFHNRLQRMANGNKFIDN-----CILQMYCDCKSFTAAERVFDEMVD-R 73
C LG L G+ RL+ A N F DN ++MY C A+R+F+E+ + R
Sbjct: 225 CANLGELEIGR----RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR 280
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
+L SW ++I + A G A+ LF++ML G KP + F LL
Sbjct: 281 NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL 324
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 264/523 (50%), Gaps = 17/523 (3%)
Query: 35 RLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGA 94
R R+ N N +L+ T A+ +FDE+ RDL S + +S++ G+
Sbjct: 9 RFIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDT 68
Query: 95 IRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNM 154
+ LF ++ SS F +LG+ + S E G+Q+H+ +I+ G +T L +M
Sbjct: 69 LALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDM 128
Query: 155 YIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
Y K G L + + K+ V+ L+ G+ + + +AL +FA M +E V++ EF
Sbjct: 129 YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTL 188
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR- 273
S V+K CA+LK + G+Q+H+ V G + V +GT ++ FYS G A + + S+
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNV 247
Query: 274 EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQ 333
++ +++I+G ++ + +A R N V ++ CS SDL G Q
Sbjct: 248 HTDEVMLNSLISGCIRNRNYKEAFLLMSRQRP-----NVRVLSSSLAGCSDNSDLWIGKQ 302
Query: 334 VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK 393
+H A++ G V + ++ MY KCG++ A F I ++WT++I AYA +G
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD 362
Query: 394 S-EAVKLFHKMLR--SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
+A+++F +M SGV PN+VTF+ +++AC+H+GLVKEGK+ M KY + P +H
Sbjct: 363 GVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEH 422
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS-----WKTLLGGCWSHRNLETASIAAGK 505
Y C I + S+AG +E ++ M E D S W +L C + +L A +
Sbjct: 423 YVCFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARR 481
Query: 506 IF-HLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+ P +++ YV + N +A G WD + R + + L K
Sbjct: 482 LMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVK 524
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 198/368 (53%), Gaps = 7/368 (1%)
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
GY+ + +++ ++++M + G+K ++ F +LKACA+ + GRQI +K G +
Sbjct: 87 GYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF 146
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+V VG L+ Y C + A + F+ + E N SW++I+T ++G+ + E F +
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
K + + AC +L G VH+ + + L +A++ MY+K G L+
Sbjct: 207 GKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLR-SGVRPNAVTFIGLLNAC 422
YA F + + W+A+I A +G EA++LF KM++ S VRPN VTF+G+L AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
SH+GLV +G ++ M + + P + HY M+ + RAG L EA + I+ MPFEPD +
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 483 WKTLLGGCWSHRNLETASIA---AGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
W+TLL C H + + I ++ L+P S V + N A A W EAA+ R++
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 540 MAERNLRK 547
M E ++K
Sbjct: 445 MKETKMKK 452
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 151/322 (46%), Gaps = 13/322 (4%)
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
+W + Y+ + +I ++S M GIKP+ F LL + A L G+Q+ ++
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 137 IRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDAL 196
++ GF DV + L ++Y C A ++MT +N V+ +M + +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
F +MI + DE ++L AC +++ G+ +HS + LE +GT LVD Y
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF-KNIRSKGVILNSFVY 315
+K G E A FE + + N ++WSA+I G Q G ++AL+ F K ++ V N +
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 316 TNIFQACSAISDLVYGAQVHAD-----AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
+ ACS + G + + IK ++ Y AM+ + + G+L+ AY
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHY----GAMVDILGRAGRLNEAYDFI 373
Query: 371 LTIE-KPDTIAWTAIICAYAYH 391
+ +PD + W ++ A + H
Sbjct: 374 KKMPFEPDAVVWRTLLSACSIH 395
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 6/290 (2%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFH-NRLQRMANGNKFIDNCILQMYCDCKS 59
M I + ++ L K C L+ G+ L+ + + ++ N ++ +Y CK
Sbjct: 104 MKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKK 163
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
+ A +VFDEM +R++ SW +I++A E G + F M+ P + LL
Sbjct: 164 TSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLS- 222
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
A L LGK +HSQ++ + + T L +MY K G L+ A + +M KN
Sbjct: 223 -ACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTW 281
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTG-RQIHSYS 237
+ ++VG Q +AL LF+KM+KE V+ + F VL AC+ ++ G + H
Sbjct: 282 SAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEME 341
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITG 286
++ + +VD + GR A + + EP+ W +++
Sbjct: 342 KIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 258/549 (46%), Gaps = 28/549 (5%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFID--NCILQMYCDCKSFTAA 63
I D + + +CG L +G+ H RM ++ ++ N ++ MY C T A
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 64 ERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD--LGIKPSSSIFCTLLGSFA 121
E +F RDL SW ++ISA+++ G A LF ++ K S S +L S
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD 508
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+L GK +H L ++G L++ +++ + T +T+ N+V
Sbjct: 509 SSDSLIFGKSVHCWLQKLG---------DLTSAFLRLETMS----ETRDLTSWNSV---- 551
Query: 182 LMVGYTQALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
+ G + H ++L F M +EG ++ D + A L + GR H ++K
Sbjct: 552 -ISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKS 610
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
E + + L+ Y +C E+A + F I +PN SW+ +I+ Q+ + + F
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKC 360
+N++ + N + + A + + YG Q H I++G +A++ MYS C
Sbjct: 671 RNLKLEP---NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC 727
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKML-RSGVRPNAVTFIGL 418
G L+ + F AW ++I A+ +HG E A++LF ++ S + PN +FI L
Sbjct: 728 GMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISL 787
Query: 419 LNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEP 478
L+ACSHSG + EG + M K+GV P +H ++ + RAG L+EA E I +
Sbjct: 788 LSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQ 847
Query: 479 DTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRK 538
W LL C H + + A +F ++P +++ Y+++ N + G W+EA + RK
Sbjct: 848 KAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRK 907
Query: 539 MMAERNLRK 547
M+ + L+K
Sbjct: 908 MVEDNALKK 916
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 234/530 (44%), Gaps = 74/530 (13%)
Query: 42 GNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM 101
G+ + N ++ +Y ++ ++AE VF M RD+ SW TI++ GH +++ F M
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 102 LDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFT--ADVSIETTLSNMYIKCG 159
G + + F ++ + + L LG+ LH +I+ G++ A VS+ ++ +MY KCG
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 160 WLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVL 218
+ AE ++ ++ ++ ++ G+ +A + +M + ++ D +
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 219 KACAALKDINTGRQIHSYSVKLGLESE-VSVGTPLVDFYSKCGRFEAACQAFESIREPND 277
C L GR +H Y+V++ ++S + V ++D Y KCG A F++ +
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL 460
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT--NIFQACSAISDLVYGAQVH 335
SW+++I+ + Q+G KA FK + S+ + T I +C + L++G VH
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH 520
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI-EKPDTIAWTAIICAYAYHGKS 394
K G L A+ T+ E D +W ++I A G
Sbjct: 521 C-------------------WLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 395 -EAVKLFHKMLRSG-VRPNAVTFIGLLNACSHSGLVKEGK---------------QFLDS 437
E+++ F M R G +R + +T +G ++A + GLV +G+ Q ++
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 438 MSVKYG---------------VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
+ YG DP + +NC+I S+ +E ++ R++ EP+ ++
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEIT 681
Query: 483 WKTLLG----------GCWSHRNLETASIAAGKIFHLDPLDSATYVTMFN 522
+ LL G +H +L I G F +P SA V M++
Sbjct: 682 FVGLLSASTQLGSTSYGMQAHCHL----IRRG--FQANPFVSAALVDMYS 725
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 179/377 (47%), Gaps = 7/377 (1%)
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
+L SF + E + +H ++ G D++ + L Y + G L + +++ K+
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
+ ++ Q R+ A+ LF +MI +G + D + A ++L +H
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
+++ GL + S+ L++ Y+K +A F + + SW+ I+T +G K
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ--YLSGESAM 353
+L+ FK++ G ++ ++ + ACS+I +L G +H IK G ++S +++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLR-SGVRPN 411
I+MYSKCG + A F + D I+ AI+ +A +G EA + ++M ++P+
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP-TIDHYNCMIGVYSRAGLLQEALEM 470
T + + + C +EG+ + +V+ + ++ N +I +Y + GL +A E+
Sbjct: 393 IATVVSITSICGDLSFSREGRA-VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-EL 450
Query: 471 IRSMPFEPDTLSWKTLL 487
+ D +SW +++
Sbjct: 451 LFKTTTHRDLVSWNSMI 467
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 270/528 (51%), Gaps = 6/528 (1%)
Query: 28 DGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYA 86
+G H R+ + G N F+ + ++ +Y + A ++FDEM+DR+L ++ +
Sbjct: 130 EGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFC 189
Query: 87 EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFT-ADV 145
+ G ++ RM G+ + +C ++ + + GKQLHS +++ G+ +++
Sbjct: 190 QTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNI 249
Query: 146 SIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE 205
+ L + Y CG L G+ + N + K+ ++ ++ D+L LF+KM
Sbjct: 250 FVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 206 GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE-SEVSVGTPLVDFYSKCGRFEA 264
G + F L C+ DI +G+QIH Y +K+G + S + V + L+D Y KC E
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN 369
Query: 265 ACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS- 323
+ ++S+ N ++++T G +E F + +G ++ + + +A S
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSL 429
Query: 324 AISDLVYGAQ-VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWT 382
++ + ++ VH AIK G ++ ++I Y+K G+ + + + F ++ P+ T
Sbjct: 430 SLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLT 489
Query: 383 AIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
+II YA +G ++ VK+ +M R + P+ VT + +L+ CSHSGLV+EG+ DS+ K
Sbjct: 490 SIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESK 549
Query: 442 YGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASI 501
YG+ P Y CM+ + RAGL+++A ++ + D ++W +LL C HRN
Sbjct: 550 YGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRR 609
Query: 502 AAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
AA + +L+P + A Y+ + + G+++ + Q R++ A R L +E+
Sbjct: 610 AAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREI 657
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 239/528 (45%), Gaps = 62/528 (11%)
Query: 59 SFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
+ +A FDEM RD+ ++ +IS + G + AI L++ M+ G++ S+S F ++L
Sbjct: 61 NLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+D G Q+H ++I +GF ++ + + L +Y +D A ++M +N
Sbjct: 121 VCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAV 180
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
C L+ + Q ++ +M EGV + + +++ C+ + + G+Q+HS V
Sbjct: 181 CNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVV 240
Query: 239 KLGLE-SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKAL 297
K G S + V LVD+YS CG + ++F ++ E + SW++I++ G +L
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSL 300
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL-VQYLSGESAMITM 356
+ F ++ G + + + CS SD+ G Q+H +K G V L +SA+I M
Sbjct: 301 DLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM 360
Query: 357 YSKCGKLDYA---YQAF--LTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPN 411
Y KC ++ + YQ+ L +E +++ + + C + +++F M+ G +
Sbjct: 361 YGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT----KDIIEMFGLMIDEGTGID 416
Query: 412 AVTFIGLLNACS-------------HSGLVKEGK--------QFLDSMSVKYGVD----- 445
VT +L A S H +K G +D+ + K G +
Sbjct: 417 EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYT-KSGQNEVSRK 475
Query: 446 -------PTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRN 495
P I +I Y+R G+ + ++M+R M PD ++ ++L GC SH
Sbjct: 476 VFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGC-SHSG 534
Query: 496 LETASIAAGKIFHLDPLDS--------ATYVTMFNLHALAGNWDEAAQ 535
L + G++ D L+S Y M +L AG ++A +
Sbjct: 535 L----VEEGELI-FDSLESKYGISPGRKLYACMVDLLGRAGLVEKAER 577
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 156/323 (48%), Gaps = 4/323 (1%)
Query: 156 IKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFS 215
IK G L A A ++M+ ++ V L+ G ++ A+ L+A+M+ G++ F
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 216 IVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREP 275
VL C+ G Q+H + LG + V + LV Y+ + A + F+ + +
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N + ++ +CQ+G + E + + +GV N Y + + CS + G Q+H
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 336 ADAIKKGL-VQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS 394
+ +K G + + + ++ YS CG L + ++F + + D I+W +I+ A +G
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 395 -EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY-N 452
+++ LF KM G RP+ F+ LN CS + ++ GKQ + +K G D + H +
Sbjct: 297 LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQ-IHCYVLKMGFDVSSLHVQS 355
Query: 453 CMIGVYSRAGLLQEALEMIRSMP 475
+I +Y + ++ + + +S+P
Sbjct: 356 ALIDMYGKCNGIENSALLYQSLP 378
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 8/242 (3%)
Query: 253 VDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
+D K G +A +AF+ + + +++ +I+G + G +A+E + + S G+ ++
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
+ ++ CS G QVH I G + SA++ +Y+ +D A + F
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 373 IEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLR---SGVRPNAVTFIGLLNACSHSGLVK 429
+ + ++ + G+S+ +LF LR GV N +T+ ++ CSH LV
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESK--RLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVY 230
Query: 430 EGKQFLDSMSVKYGVD-PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
EGKQ L S+ VK G + I N ++ YS G L ++ ++P E D +SW +++
Sbjct: 231 EGKQ-LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVS 288
Query: 489 GC 490
C
Sbjct: 289 VC 290
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 259/549 (47%), Gaps = 48/549 (8%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVF 67
D HL ++ G G +S + H + + N + N +++ Y S A +VF
Sbjct: 54 DASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF 113
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
DEM D D+ SW +++S Y + G I LF + + P+ F L + A
Sbjct: 114 DEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSP 173
Query: 128 LGKQLHSQLIRIGF-TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
LG +HS+L+++G +V + L +MY KCG++D A + M K+ V+ ++
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Query: 187 TQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
++ + L F +M + V +E
Sbjct: 234 SRNGKLELGLWFFHQMPNPDTVTYNE---------------------------------- 259
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
L+D + K G F A Q + PN SW+ I+TGY S + +A E F + S
Sbjct: 260 ------LIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS 313
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDY 365
GV + + + + A +A++ + +G+ +HA A K GL + SA+I MYSKCG L +
Sbjct: 314 SGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 366 AYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSG-VRPNAVTFIGLLNACS 423
A F T+ + + I W +I YA +G S EA+KLF+++ + ++P+ TF+ LL CS
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Query: 424 HSGLVKEGK-QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
H + E + + M +Y + P+++H +I + G + +A ++I+ F D ++
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA 493
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSAT--YVTMFNLHALAGNWDEAAQYRKMM 540
W+ LLG C + ++L+ A A K+ L D Y+ M NL+A W E Q RK+M
Sbjct: 494 WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIM 553
Query: 541 AERNLRKEV 549
E + KEV
Sbjct: 554 RESGVLKEV 562
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 196/434 (45%), Gaps = 48/434 (11%)
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
SW+TI+ A A G IG +R +++ G KP +S LL + + L +QLH +
Sbjct: 23 SWSTIVPALARFGS-IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 137 IRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDAL 196
+ GF ++ + +L Y L+ A ++M + ++ L+ GY Q+ R + +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES-EVSVGTPLVDF 255
LF ++ + V +EF F+ L ACA L G IHS VKLGLE V VG L+D
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY 315
Y KCG + A F+ + E + SW+AI+ ++G+ + L F + + + Y
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV----TY 257
Query: 316 TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK 375
+ A + K G + A+Q +
Sbjct: 258 NELIDA-----------------------------------FVKSGDFNNAFQVLSDMPN 282
Query: 376 PDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
P++ +W I+ Y KS EA + F KM SGVR + + + ++ A + V
Sbjct: 283 PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYS-LSIVLAAVAALAVVPWGSL 341
Query: 435 LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR 494
+ + + K G+D + + +I +YS+ G+L+ A M +MP + + W ++ G R
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP-RKNLIVWNEMISG--YAR 398
Query: 495 NLETASIAAGKIFH 508
N + SI A K+F+
Sbjct: 399 NGD--SIEAIKLFN 410
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 231/490 (47%), Gaps = 44/490 (8%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A ++FDE+ D+ ++ A+ + L++ M G+ P F +L + +
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
G H +++R GF + ++ L + CG L A + + VA + +
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
GY + + +A+ LF +M + D+ +++++ C K++++ R++
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSAREL--------- 231
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
F+ E + +W+A+I+GY G +AL FK
Sbjct: 232 --------------------------FDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ---YLSGE--SAMITMY 357
+R G + ++ AC+ + DL G ++H ++ V Y+ +A+I MY
Sbjct: 266 MRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 358 SKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIG 417
+KCG +D A + F ++ D W +I A H ++++F +M R V PN VTFIG
Sbjct: 326 AKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIG 385
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
++ ACSHSG V EG+++ M Y ++P I HY CM+ + RAG L+EA + SM E
Sbjct: 386 VILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIE 445
Query: 478 PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYR 537
P+ + W+TLLG C + N+E A K+ + +S YV + N++A G WD + R
Sbjct: 446 PNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVR 505
Query: 538 KMMAERNLRK 547
KM + ++K
Sbjct: 506 KMFDDTRVKK 515
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 199/459 (43%), Gaps = 65/459 (14%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKS 59
M++ +S D ++ + K C L S+G FH ++ R N+++ N ++ + +C
Sbjct: 103 MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGD 162
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A +FD+ +W+++ S YA+ G + A+RLF M
Sbjct: 163 LGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM-----------------P 205
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+ D A +V I L KC +D A ++ T K+ V
Sbjct: 206 YKDQVAW-----------------NVMITGCL-----KCKEMDSARELFDRFTEKDVVTW 243
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
++ GY +AL +F +M G D +L ACA L D+ TG+++H Y ++
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Query: 240 LG-LESEVSVGTP----LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFD 294
+ S + VGTP L+D Y+KCG + A + F +++ + +W+ +I G +
Sbjct: 304 TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAE 362
Query: 295 KALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA-----DAIKKGLVQYLSG 349
++E F+ ++ V N + + ACS + G + + I+ + Y
Sbjct: 363 GSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHY--- 419
Query: 350 ESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGKSEAVKLFHKMLR 405
M+ M + G+L+ +AF+ +E +P+ I W ++ A +G E K ++ L
Sbjct: 420 -GCMVDMLGRAGQLE---EAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLL 475
Query: 406 SGVRPNAVTFIGLLNACSHSGL---VKEGKQFLDSMSVK 441
S + + ++ L N + +G V++ ++ D VK
Sbjct: 476 SMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVK 514
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 73/248 (29%)
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
R K + KNIR+ I S V + S + +L+Y A +
Sbjct: 14 RRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASL----------------- 56
Query: 352 AMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVK------LFHKMLR 405
S G L YA++ F I KPD IC + G ++++K L+ +M +
Sbjct: 57 ------SVPGALKYAHKLFDEIPKPDV-----SICNHVLRGSAQSMKPEKTVSLYTEMEK 105
Query: 406 SGVRPNAVTFIGLLNACS-----------HSGLVKEGKQFLDSMSVKYGVDPTIDHYNC- 453
GV P+ TF +L ACS H +V+ G F+ + VK + + H NC
Sbjct: 106 RGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG--FVLNEYVKNAL--ILFHANCG 161
Query: 454 ----------------------MIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCW 491
M Y++ G + EA+ + MP++ D ++W ++ GC
Sbjct: 162 DLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK-DQVAWNVMITGCL 220
Query: 492 SHRNLETA 499
+ +++A
Sbjct: 221 KCKEMDSA 228
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 249/514 (48%), Gaps = 43/514 (8%)
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQ 131
+ ++F + T+ISA + + L+S M+ + P F L+ + S L KQ
Sbjct: 97 NPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKA---SSFLSEVKQ 151
Query: 132 LHSQLIRIG-FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
+H +I G + + +L Y++ G AE +M + + ++VGY +
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG--LESEVSV 248
+AL L+ KM+ +G++ DE+ +L C L DI G+ +H + + G S + +
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
L+D Y KC A +AF+++++ + SW+ ++ G+ + G + A F + + +
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDL 331
Query: 309 I-LNSFVYTNIFQAC--------------------------SAIS------DLVYGAQVH 335
+ NS ++ + C S IS +L +G VH
Sbjct: 332 VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-S 394
I+ L SA+I MY KCG ++ A+ F T + D WT++I A+HG
Sbjct: 392 GLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQ 451
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCM 454
+A++LF +M GV PN VT + +L ACSHSGLV+EG + M K+G DP +HY +
Sbjct: 452 QALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSL 511
Query: 455 IGVYSRAGLLQEALEMI-RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLD 513
+ + RAG ++EA +++ + MP P W ++L C ++ETA +A ++ L+P
Sbjct: 512 VDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEK 571
Query: 514 SATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
YV + N++A G W + + R+ M R ++K
Sbjct: 572 EGGYVLLSNIYATVGRWGYSDKTREAMENRGVKK 605
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 175/385 (45%), Gaps = 41/385 (10%)
Query: 42 GNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM 101
GN ++ N +++ Y + +F AE+VF M D+ S+ +I YA++G + A++L+ +M
Sbjct: 165 GN-YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 102 LDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG--FTADVSIETTLSNMYIKC- 158
+ GI+P +LL S + LGK +H + R G +++++ + L +MY KC
Sbjct: 224 VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 159 ------------------------------GWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
G ++ A+ ++M ++ V+ L+ GY++
Sbjct: 284 ESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSK 343
Query: 189 A--LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ T L + I E VK D ++ A +++ GR +H ++L L+ +
Sbjct: 344 KGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA 403
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
+ + L+D Y KCG E A F++ E + W+++ITG G +AL+ F ++ +
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEE 463
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYLSGESAMITMYSKCGKLDY 365
GV N+ + ACS + G V K G +++ + + G+++
Sbjct: 464 GVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Query: 366 A---YQAFLTIEKPDTIAWTAIICA 387
A Q + + +P W +I+ A
Sbjct: 524 AKDIVQKKMPM-RPSQSMWGSILSA 547
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 133/326 (40%), Gaps = 44/326 (13%)
Query: 8 IDPRSYK--HLFKMCGMLGALSDGKLFHNRLQRMA---NGNKFIDNCILQMYCDCKSFTA 62
I+P Y L CG L + GK H ++R + N + N +L MY CK
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM----------LDLG------- 105
A+R FD M +D+ SW T++ + G M A +F +M L G
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 106 ----------------IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIET 149
+KP +L+ A+ L G+ +H +IR+ D + +
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 150 TLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
L +MY KCG ++ A + T K+ T ++ G AL LF +M +EGV
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSY-SVKLGLESEVSVGTPLVDFYSKCGRFEAA--- 265
+ VL AC+ + G + ++ K G + E LVD + GR E A
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 266 CQAFESIREPNDFSWSAIITGYCQSG 291
Q +R P+ W +I++ C+ G
Sbjct: 528 VQKKMPMR-PSQSMWGSILSA-CRGG 551
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 223/455 (49%), Gaps = 35/455 (7%)
Query: 130 KQLHSQLIRIGFTAD-VSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
KQ+H+ LI+ G +D V+ L+ ++ A + ++ KN ++ G+++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 189 ALRHTDALLLFAKMI--KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ A+ +F M+ VK + V KA L GRQ+H +K GLE +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 247 SVGTPLVDFY-------------------------------SKCGRFEAACQAFESIREP 275
+ ++ Y +KCG + A F+ + +
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N SW+++I+G+ ++GRF AL+ F+ ++ K V + F ++ AC+ + G +H
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE 395
++ +A+I MY KCG ++ F K W ++I A +G E
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 396 -AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCM 454
A+ LF ++ RSG+ P++V+FIG+L AC+HSG V +F M KY ++P+I HY M
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 455 IGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDS 514
+ V AGLL+EA +I++MP E DT+ W +LL C N+E A AA + LDP ++
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 515 ATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
YV + N +A G ++EA + R +M ER + KEV
Sbjct: 462 CGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEV 496
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 172/403 (42%), Gaps = 35/403 (8%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML--DLGIKPSSSIFCTLLGSFADP 123
VF + ++ F W TII ++ AI +F ML +KP + ++ ++
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYI--------------------------- 156
G+QLH +I+ G D I T+ +MY+
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 157 ----KCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEF 212
KCG +D A+ ++M +N V+ ++ G+ + R DAL +F +M ++ VK D F
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
+L ACA L GR IH Y V+ E V T L+D Y KCG E FE
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGA 332
+ W+++I G +G ++A++ F + G+ +S + + AC+ ++
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 333 QVHADAIKKGLVQ-YLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAY 390
+ +K +++ + + M+ + G L+ A + + DT+ W++++ A
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRK 439
Query: 391 HGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ 433
G E K K L+ ++ L NA + GL +E +
Sbjct: 440 IGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 157/360 (43%), Gaps = 43/360 (11%)
Query: 221 CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY-SKCGRFEAACQAFESIREPNDFS 279
C+ ++++ +QIH+ +K GL S+ + ++ F + A F I N F
Sbjct: 35 CSTMREL---KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFV 91
Query: 280 WSAIITGYCQSGRFDKALETFKNI--RSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
W+ II G+ +S + A+ F ++ S V Y ++F+A + G Q+H
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK---- 393
IK+GL + M+ MY CG L A++ FL + D +AW ++I +A G
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 394 ----------------------------SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHS 425
+A+ +F +M V+P+ T + LLNAC++
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 426 GLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKT 485
G ++G+ ++ V+ + +I +Y + G ++E L + P + W +
Sbjct: 272 GASEQGR-WIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP-KKQLSCWNS 329
Query: 486 LLGGCWSHRNLETASIAAGKIFH--LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
++ G ++ E A ++ L+P DS +++ + A +G A ++ ++M E+
Sbjct: 330 MILGLANNGFEERAMDLFSELERSGLEP-DSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 38/335 (11%)
Query: 7 SIDPR--SYKHLFKMCGMLGALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAA 63
S+ P+ +Y +FK G LG DG+ H ++ + FI N +L MY C A
Sbjct: 121 SVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180
Query: 64 ERV-------------------------------FDEMVDRDLFSWATIISAYAEEGHMI 92
R+ FDEM R+ SW ++IS + G
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 93 GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
A+ +F M + +KP +LL + A A E G+ +H ++R F + + T L
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI 300
Query: 153 NMYIKCGWLDGAEVATNKMTTKNAVAC-TGLMVGYTQALRHTDALLLFAKMIKEGVKLDE 211
+MY KCG ++ + + K ++C +++G A+ LF+++ + G++ D
Sbjct: 301 DMYCKCGCIEEG-LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 212 FVFSIVLKACAALKDINTGRQIHSY-SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFE 270
F VL ACA +++ + K +E + T +V+ G E A +
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 271 SIR-EPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
++ E + WS++++ + G + A K ++
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLK 454
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 231/476 (48%), Gaps = 8/476 (1%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDC 57
M E + ++ S ++FK AL G H + NG + F+ ++ MY C
Sbjct: 205 MRELGVDLNVYSLSNVFKSFAGASALRQGLKTH--ALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTL 116
A RVFDE+V+RD+ W +I+ A A+ LF M+ + I P+S I T+
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 117 LGSFADPSALELGKQLHSQLIRI-GFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L D AL+LGK++H+ +++ + + + L ++Y KCG + +N
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
A++ T LM GY R AL M +EG + D + VL CA L+ I G++IH
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHC 442
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
Y++K VS+ T L+ YSKCG E + F+ + + N +W+A+I Y ++
Sbjct: 443 YALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMIT 355
+E F+ + +S + CS + L G ++H +KK + +I
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIK 562
Query: 356 MYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVT 414
MY KCG L A +F + ++ WTAII AY + +A+ F +M+ G PN T
Sbjct: 563 MYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFT 622
Query: 415 FIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
F +L+ CS +G V E +F + M Y + P+ +HY+ +I + +R G ++EA +
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 222/442 (50%), Gaps = 10/442 (2%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDC 57
+++ I ++ ++ L + C +L GK H ++ NG N+F+ ++ MY C
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIR--INGLESNEFLRTKLVHMYTAC 159
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEG--HMIGAIRLFSRMLDLGIKPSSSIFCT 115
S A++VFDE +++SW ++ G + F+ M +LG+ +
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
+ SFA SAL G + H+ I+ G V ++T+L +MY KCG + A +++ ++
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMI-KEGVKLDEFVFSIVLKACAALKDINTGRQIH 234
V ++ G R +AL LF MI +E + + + + +L +K + G+++H
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 235 SYSVKLGLESEVS-VGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRF 293
++ +K E V + L+D Y KCG + + F ++ N SW+A+++GY +GRF
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
D+AL + ++ +G + + C+ + + G ++H A+K + +S +++
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSL 459
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEA-VKLFHKMLRSGVRPNA 412
+ MYSKCG +Y + F +E+ + AWTA+I Y + A +++F ML S RP++
Sbjct: 460 MVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDS 519
Query: 413 VTFIGLLNACSHSGLVKEGKQF 434
VT +L CS +K GK+
Sbjct: 520 VTMGRVLTVCSDLKALKLGKEL 541
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 213/434 (49%), Gaps = 13/434 (2%)
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGF 141
I +A + ++ A+ + + GI +++ F LL + +L GKQ+H + G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 142 TADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG--YTQALRHTDALLLF 199
++ + T L +MY CG + A+ ++ T+ N + L+ G + R+ D L F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 200 AKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKC 259
+M + GV L+ + S V K+ A + G + H+ ++K GL + V + T LVD Y KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN-IRSKGVILNSFVYTNI 318
G+ A + F+ I E + W A+I G + R +AL F+ I + + NS + T I
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 319 FQACSAISDLVYGAQVHADAIK-KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
+ L G +VHA +K K V+ S +I +Y KCG + + F ++ +
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 378 TIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
I+WTA++ YA +G+ +A++ M + G RP+ VT +L C+ +K+GK+ +
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE-IH 441
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNL 496
++K P + ++ +YS+ G+ + + + + + + +W ++ C+ +
Sbjct: 442 CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMI-DCY----V 495
Query: 497 ETASIAAG-KIFHL 509
E + AG ++F L
Sbjct: 496 ENCDLRAGIEVFRL 509
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 185/344 (53%), Gaps = 1/344 (0%)
Query: 206 GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAA 265
G++++ ++++L+ C K+ G++IH+ +G + L+ Y+ G + A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 266 CQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI 325
F S++ + W+A+I+GY Q G + L + ++R ++ + + + ++F+ACSA+
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 326 SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
L +G + HA IK+ + + +SA++ MY KC ++ F + + I WT++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 386 CAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
Y YHGK SE +K F KM G RPN VTF+ +L AC+H GLV +G + SM YG+
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
+P HY M+ RAG LQEA E + P + W +LLG C H N++ +AA
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAAT 402
Query: 505 KIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
K LDP + YV N +A G + A++ R+ M ++K+
Sbjct: 403 KFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 140/298 (46%), Gaps = 4/298 (1%)
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G++ + LL GK++H+Q+ +GF + ++ L +Y G L A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL 224
+ + ++ + ++ GY Q + L ++ M + + D++ F+ V +AC+AL
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 225 KDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAII 284
+ G++ H+ +K ++S + V + LVD Y KC F + F+ + N +W+++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+GY G+ + L+ F+ ++ +G N + + AC+ LV H ++K+
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNH-GGLVDKGWEHFYSMKRDYG 341
Query: 345 QYLSGE--SAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKL 399
G+ +AM+ + G+L AY+ + K W +++ A HG + ++L
Sbjct: 342 IEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLEL 399
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAE 64
+ ++P +Y L + C + GK H ++ + N+++ +L +Y A
Sbjct: 104 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
+F + RDL W +IS Y ++G + ++ M I P F ++ + +
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
LE GK+ H+ +I+ +++ +++ L +MY KC ++++T+N + T L+
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK--LGL 242
GY + ++ L F KM +EG + + F +VL AC ++ G + H YS+K G+
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGI 342
Query: 243 ESEVSVGTPLVDFYSKCGRFEAA 265
E E +VD + GR + A
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEA 365
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 220/421 (52%), Gaps = 46/421 (10%)
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
N+ T++ V+ T + T+ R +A F+ M GV+ + F +L C D
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCG---DFT 85
Query: 229 TGRQ-----IHSYSVKLGLE-SEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSA 282
+G + +H Y+ KLGL+ + V VGT ++ YSK GRF+ A F+ + + N +W+
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVI-----LNSFV----------------------- 314
+I GY +SG+ D A + F + + +I +N FV
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 315 YTNI---FQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFL 371
Y I AC+ + L +G VH + + + +++I +Y +CG +++A Q F
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 372 TIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKE 430
+EK ++W ++I +A +G + E++ F KM G +P+AVTF G L ACSH GLV+E
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC 490
G ++ M Y + P I+HY C++ +YSRAG L++AL++++SMP +P+ + +LL C
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 491 WSHRNLETASIAAGKIFHLDPLD---SATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+H N +A + HL L+ + YV + N++A G W+ A++ R+ M L+K
Sbjct: 386 SNHGN--NIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 548 E 548
+
Sbjct: 444 Q 444
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 180/437 (41%), Gaps = 77/437 (17%)
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD--PSALELGKQLHS 134
SW + I+ G + A + FS M G++P+ F LL D + LG LH
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 135 QLIRIGFTAD-VSIETTLSNM-------------------------------YIKCGWLD 162
++G + V + T + M Y++ G +D
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
A +KM ++ ++ T ++ G+ + +ALL F +M GVK D L AC
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSA 282
L ++ G +H Y + ++ V V L+D Y +CG E A Q F ++ + SW++
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
+I G+ +G ++L F+ ++ KG ++ +T ACS H +++G
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS-----------HVGLVEEG 326
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFH 401
L Y + K DY P + ++ Y+ G+ E A+KL
Sbjct: 327 L------------RYFQIMKCDYRIS-------PRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 402 KMLRSGVRPNAVTFIGLLNACSHSG----LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGV 457
M ++PN V LL ACS+ G L + + L ++VK + +Y + +
Sbjct: 368 SM---PMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVK-----SHSNYVILSNM 419
Query: 458 YSRAGLLQEALEMIRSM 474
Y+ G + A +M R M
Sbjct: 420 YAADGKWEGASKMRRKM 436
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 39 MANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLF 98
M + N N ++ Y A ++FD+M +RDL SW +I+ + ++G+ A+ F
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 99 SRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC 158
M G+KP L + + AL G +H ++ F +V + +L ++Y +C
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 159 GWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVL 218
G ++ A M + V+ ++VG+ ++L+ F KM ++G K D F+ L
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 219 KACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI-REPN 276
AC+ + + G R + + LVD YS+ GR E A + +S+ +PN
Sbjct: 315 TACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPN 374
Query: 277 DFSWSAIITGYCQSG 291
+ +++ G
Sbjct: 375 EVVIGSLLAACSNHG 389
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 193/352 (54%), Gaps = 3/352 (0%)
Query: 198 LFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
LF +M +E V+ D+F ++L+AC+A ++ +G IH +KLG S + V + LV Y
Sbjct: 120 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
G+ A + F+ + + ++A+ GY Q G L F+ + G L+S V
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 317 NIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKP 376
++ AC + L +G VH I++ L+ +A+ MY KC LDYA+ F+ + +
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 377 DTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFL 435
D I+W+++I Y G + KLF +ML+ G+ PNAVTF+G+L+AC+H GLV++ +
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 436 DSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRN 495
M +Y + P + HY + SRAGLL+EA + + MP +PD +L GC + N
Sbjct: 360 RLMQ-EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 418
Query: 496 LETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+E A ++ L P ++ YVT+ L++ AG +DEA R+ M E+ + K
Sbjct: 419 VEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISK 470
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 132/290 (45%), Gaps = 10/290 (3%)
Query: 3 EACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFT 61
E+C+ D + + + C G L H ++ + + F+ + ++ MY D
Sbjct: 127 ESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLL 186
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
A ++FD+M RD + + Y ++G + + +F M G S + +LL +
Sbjct: 187 HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACG 246
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
AL+ GK +H IR +++ +++MY+KC LD A M+ ++ ++ +
Sbjct: 247 QLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSS 306
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG----RQIHSYS 237
L++GY + LF +M+KEG++ + F VL ACA + R + Y+
Sbjct: 307 LILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYN 366
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITG 286
+ L+ SV D S+ G E A + E + +P++ A+++G
Sbjct: 367 IVPELKHYASVA----DCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSG 412
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 236/450 (52%), Gaps = 10/450 (2%)
Query: 42 GNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM 101
GN I +C+ A +VFD M +++ +W +I Y + G A LF
Sbjct: 120 GNNLISSCV-----RLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDY 174
Query: 102 LDLGIK-PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW 160
+ GI+ + +F LL + + ELG+Q+H ++++G ++ +E++L Y +CG
Sbjct: 175 VKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGE 233
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA 220
L A A + M K+ ++ T ++ ++ A+ +F M+ +EF +LKA
Sbjct: 234 LTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKA 293
Query: 221 CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSW 280
C+ K + GRQ+HS VK ++++V VGT L+D Y+KCG + F+ + N +W
Sbjct: 294 CSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTW 353
Query: 281 SAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIK 340
++II + + G ++A+ F+ ++ + +I N+ +I +AC ++ L+ G ++HA IK
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK 413
Query: 341 KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKL 399
+ + + S ++ +Y KCG+ A+ + D ++WTA+I + G +SEA+
Sbjct: 414 NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 400 FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
+M++ GV PN T+ L AC++S + G+ + S++ K + + +I +Y+
Sbjct: 474 LKEMIQEGVEPNPFTYSSALKACANSESLLIGRS-IHSIAKKNHALSNVFVGSALIHMYA 532
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ G + EA + SMP E + +SWK ++ G
Sbjct: 533 KCGFVSEAFRVFDSMP-EKNLVSWKAMIMG 561
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 216/415 (52%), Gaps = 1/415 (0%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFD 68
+ R + L +C G+ H + ++ GN +++ ++ Y C T+A R FD
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFD 242
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
M ++D+ SW +ISA + +GH I AI +F ML+ P+ C++L + ++ AL
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
G+Q+HS +++ DV + T+L +MY KCG + + M+ +N V T ++ + +
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
+A+ LF M + + + +L+AC ++ + G+++H+ +K +E V +
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYI 422
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
G+ LV Y KCG A + + + SW+A+I+G G +AL+ K + +GV
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
N F Y++ +AC+ L+ G +H+ A K + + SA+I MY+KCG + A++
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFR 542
Query: 369 AFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNAC 422
F ++ + + ++W A+I YA +G EA+KL ++M G + F +L+ C
Sbjct: 543 VFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 166/311 (53%), Gaps = 1/311 (0%)
Query: 16 LFKMCGMLGALSDGKLFHNRL-QRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
+ K C AL G+ H+ + +RM + F+ ++ MY C + +VFD M +R+
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
+W +II+A+A EG AI LF M + ++ ++L + AL LGK+LH+
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
Q+I+ +V I +TL +Y KCG A ++ +++ V+ T ++ G + ++
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESE 469
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVD 254
AL +MI+EGV+ + F +S LKACA + + GR IHS + K S V VG+ L+
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 255 FYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFV 314
Y+KCG A + F+S+ E N SW A+I GY ++G +AL+ + ++G ++ ++
Sbjct: 530 MYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI 589
Query: 315 YTNIFQACSAI 325
+ I C I
Sbjct: 590 FATILSTCGDI 600
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 193/371 (52%), Gaps = 5/371 (1%)
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLM 183
+ + L K++H+ ++ + L + ++ G L A + M KN V T ++
Sbjct: 96 NGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMI 155
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKL-DEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
GY + +A LF +K G++ +E +F +L C+ + GRQ+H VK+G+
Sbjct: 156 DGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV 215
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
+ + V + LV FY++CG +A +AF+ + E + SW+A+I+ + G KA+ F
Sbjct: 216 GNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIG 274
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+ + + N F +I +ACS L +G QVH+ +K+ + + ++++ MY+KCG+
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
+ + F + +T+ WT+II A+A G EA+ LF M R + N +T + +L A
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTL 481
C G + GK+ L + +K ++ + + ++ +Y + G ++A +++ +P D +
Sbjct: 395 CGSVGALLLGKE-LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVV 452
Query: 482 SWKTLLGGCWS 492
SW ++ GC S
Sbjct: 453 SWTAMISGCSS 463
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 112/211 (53%), Gaps = 1/211 (0%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
+ + CG +GAL GK H ++ + + N +I + ++ +YC C A V ++ RD
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD 450
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
+ SW +IS + GH A+ M+ G++P+ + + L + A+ +L +G+ +HS
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS 510
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
+ ++V + + L +MY KCG++ A + M KN V+ +++GY + +
Sbjct: 511 IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCRE 570
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
AL L +M EG ++D+++F+ +L C ++
Sbjct: 571 ALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 228/489 (46%), Gaps = 48/489 (9%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
+F +R+ F +I E ++R F ML LG+KP F +L S +
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA----EVATNKMTTKNAVACTG 181
LG+ LH+ ++ D + +L +MY K G L A E + +++ ++ +
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
L+ GY +A A LF M + N+G S+S
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPER----------------------NSG----SWST--- 232
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
L+ Y G A Q FE + E N SW+ +I G+ Q+G ++ A+ T+
Sbjct: 233 ----------LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ KG+ N + + ACS L G ++H + G+ + +A++ MY+KCG
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLN 420
+LD A F + D ++WTA+I +A HG+ +A++ F +M+ SG +P+ V F+ +L
Sbjct: 343 ELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLT 402
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
AC +S V G F DSM + Y ++PT+ HY ++ + RAG L EA E++ +MP PD
Sbjct: 403 ACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDL 462
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYR--- 537
+W L C +H+ A + + LDP +Y+ + HA GN + + R
Sbjct: 463 TTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSL 522
Query: 538 -KMMAERNL 545
K + ER+L
Sbjct: 523 QKRIKERSL 531
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
+++ Y D A+++F+ M ++++ SW T+I+ +++ G AI + ML+ G+KP+
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
+L + + AL G ++H ++ G D +I T L +MY KCG LD A +
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
M K+ ++ T ++ G+ R A+ F +M+ G K DE VF VL AC +++
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDL 412
Query: 230 GRQ-IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAI 283
G S + +E + +VD + G+ A + E++ P+ +W+A+
Sbjct: 413 GLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 20 CGMLGALSDGKLFHNRLQRMANGNKF---IDNCILQMYCDCKSFTAAERVFDEMVDRDLF 76
C GAL G H + + NG K I ++ MY C A VF M +D+
Sbjct: 303 CSKSGALGSGIRIHGYI--LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL 360
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
SW +I +A G AI+ F +M+ G KP +F +L + + S ++LG +
Sbjct: 361 SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Query: 137 IRIGFTADVSIETTLSN 153
D +IE TL +
Sbjct: 421 -----RLDYAIEPTLKH 432
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 239/484 (49%), Gaps = 22/484 (4%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A +F+ + + +LF + T+I Y+ A +F+++ G+ F T L S +
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM-TTKNAVACTG 181
+ +G+ LH +R GF + L + Y CG + A ++M + +AV +
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
LM GY Q + AL LF M K V ++ L A + L D++ H +K+G
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG 257
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
L+ ++ + T L+ Y K G +A + F+ + +W+ +I Y ++G ++ + +
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 302 NIRSKGVILNSFVYTNIFQACS---------AISDLVYGAQVHADAIKKGLVQYLSGESA 352
++ + + NS + + +C+ ++DL+ ++ DAI +A
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILG---------TA 368
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSG--VR 409
++ MY+K G L+ A + F ++ D +WTA+I Y HG + EAV LF+KM VR
Sbjct: 369 LVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVR 428
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
PN +TF+ +LNACSH GLV EG + M Y P ++HY C++ + RAG L+EA E
Sbjct: 429 PNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYE 488
Query: 470 MIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGN 529
+IR++P D+ +W+ LL C + N + ++ + A + + HA+AGN
Sbjct: 489 LIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Query: 530 WDEA 533
+++
Sbjct: 549 PEKS 552
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 174/397 (43%), Gaps = 8/397 (2%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFID--NCILQMYCDCKSFTAA 63
+++D S+ K C +S G+ H R + F D N ++ YC C + A
Sbjct: 121 LTLDRFSFITTLKSCSRELCVSIGEGLHGIALR-SGFMVFTDLRNALIHFYCVCGKISDA 179
Query: 64 ERVFDEMVDR-DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
+VFDEM D +++T+++ Y + A+ LF M + + S + L + +D
Sbjct: 180 RKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISD 239
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
L + H I+IG D+ + T L MY K G + A + K+ V +
Sbjct: 240 LGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCM 299
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ Y + + + L +M E +K + F +L +CA + GR + + +
Sbjct: 300 IDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERI 359
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
+ +GT LVD Y+K G E A + F +++ + SW+A+I+GY G +A+ F
Sbjct: 360 ALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNK 419
Query: 303 IRSKG--VILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYLSGESAMITMYSK 359
+ + V N + + ACS ++ G + ++ + ++ + +
Sbjct: 420 MEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGR 479
Query: 360 CGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
G+L+ AY+ + D+ AW A++ A +G ++
Sbjct: 480 AGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNAD 516
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 163/366 (44%), Gaps = 42/366 (11%)
Query: 218 LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND 277
L++C +D +IH Y VK GL+ + + L+ F S A FE + N
Sbjct: 35 LRSC---RDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLD-IRYASSIFEHVSNTNL 90
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
F ++ +I GY S ++A F +R+KG+ L+ F + ++CS + G +H
Sbjct: 91 FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGI 150
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKP-DTIAWTAIICAY-AYHGKSE 395
A++ G + + +A+I Y CGK+ A + F + + D + ++ ++ Y K+
Sbjct: 151 ALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKAL 210
Query: 396 AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD---------- 445
A+ LF M +S V N T + L+A S G + G + + +K G+D
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS-GAESAHVLCIKIGLDLDLHLITALI 269
Query: 446 ---------------------PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTL 481
+ +NCMI Y++ GLL+E + ++R M +E P++
Sbjct: 270 GMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSS 329
Query: 482 SWKTLLGGC-WSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
++ LL C +S ++A LD+ + +++A G ++A + M
Sbjct: 330 TFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 541 AERNLR 546
+++++
Sbjct: 390 KDKDVK 395
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 206/372 (55%), Gaps = 12/372 (3%)
Query: 186 YTQALRHTDALLLFAKMIKEGVK-LDEFVFSIVLKACAALKDIN-TGRQIHSYSVKLGLE 243
Y ++ ALL F ++ +D F +K +A K + GRQIH+ KLG
Sbjct: 38 YLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFN 97
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAF-ESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
+ + + T LV FYS G + A Q F E+ + N W+A+I+ Y ++ +A+E FK
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKR 157
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG--LVQYLSGESAMITMYSKC 360
+ ++ + L+ + T AC+ + + G ++++ +IK+ L L+ ++++ MY K
Sbjct: 158 MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKS 217
Query: 361 GKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKM------LRSGVRPNAV 413
G+ + A + F + D +T++I YA +G++ E+++LF KM + + PN V
Sbjct: 218 GETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDV 277
Query: 414 TFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRS 473
TFIG+L ACSHSGLV+EGK+ SM + Y + P H+ CM+ ++ R+G L++A E I
Sbjct: 278 TFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQ 337
Query: 474 MPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA 533
MP +P+T+ W+TLLG C H N+E +IF LD YV + N++A G WDE
Sbjct: 338 MPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEK 397
Query: 534 AQYRKMMAERNL 545
++ R + +R +
Sbjct: 398 SKMRDRVRKRRM 409
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 178/373 (47%), Gaps = 23/373 (6%)
Query: 82 ISAYAEEGHMIGAIRLFS---RMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
+ Y E G I A+ F R + S +F + S S+L+ G+Q+H+ + +
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRK 93
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK-NAVACTGLMVGYTQALRHTDALL 197
+GF A + I+T+L Y G +D A ++ K N V T ++ YT+ +A+
Sbjct: 94 LGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIE 153
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG--LESEVSVGTPLVDF 255
LF +M E ++LD + ++ L ACA L + G +I+S S+K L ++++ L++
Sbjct: 154 LFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNM 213
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR----SKGVIL- 310
Y K G E A + F+ + +++++I GY +G+ ++LE FK ++ S+ ++
Sbjct: 214 YVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVIT 273
Query: 311 -NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESA----MITMYSKCGKLD 364
N + + ACS S LV + H K ++ Y L A M+ ++ + G L
Sbjct: 274 PNDVTFIGVLMACSH-SGLVEEGKRH---FKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 365 YAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
A++ + KP+T+ W ++ A + HG E + + + R + ++ L N +
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 424 HSGLVKEGKQFLD 436
G+ E + D
Sbjct: 390 SKGMWDEKSKMRD 402
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 13/273 (4%)
Query: 28 DGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR-DLFSWATIISAY 85
DG+ H ++++ N I ++ Y A +VFDE ++ ++ W +ISAY
Sbjct: 83 DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 86 AEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG--FTA 143
E + + AI LF RM I+ I L + AD A+++G++++S+ I+
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 144 DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKM- 202
D+++ +L NMY+K G + A ++ K+ T ++ GY + ++L LF KM
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 203 -IKEG----VKLDEFVFSIVLKACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFY 256
I + + ++ F VL AC+ + G R S + L+ + +VD +
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 257 SKCGRFEAACQAFESIR-EPNDFSWSAIITGYC 288
+ G + A + + +PN W ++ G C
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLL-GAC 354
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 161/629 (25%), Positives = 275/629 (43%), Gaps = 111/629 (17%)
Query: 26 LSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISA 84
L DG L H R ++ + N ++ +Y A VFDEM++R+++SW +I+A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 85 YAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA-----DPSALEL----------- 128
Y + ++ A LF + + TLL FA + A+E+
Sbjct: 64 YVKFNNVKEARELFESD---NCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 129 -----------------------GKQLHSQLIRIGFTADVSIETTLSNMYIKCG------ 159
G+QLH L++ G ++L +MY KCG
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 160 -WLDGA------EVATNKMTT---------------------KNAVACTGLMVGYTQALR 191
+G+ VA N M + ++ L+ GY Q
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
+AL + M + G+K DE F VL ++LK + G+++H+ +K G S V +
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 252 LVDFYSKCGRFEAACQA-------------------------------FESIREPNDFSW 280
+VD Y KCG + A A F+S+ E N W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 281 SAIITGYCQSGRFDKALETFKN-IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAI 339
+A+ GY + D LE + I ++ +S V ++ ACS + + G ++H ++
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 340 KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVK 398
+ G++ +A + MYSKCG ++YA + F + + DT+ + A+I A+HG ++++ +
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVY 458
F M G +P+ +TF+ LL+AC H GLV EG+++ SM Y + P HY CMI +Y
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 459 SRAGLLQEALEMIRSM-PFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATY 517
+A L +A+E++ + E D + L C ++N E K+ ++ + + Y
Sbjct: 541 GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRY 600
Query: 518 VTMFNLHALAGNWDEAAQYRKMMAERNLR 546
+ + N +A +G WDE + R M + L
Sbjct: 601 IQIANAYASSGRWDEMQRIRHQMRGKELE 629
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 222/457 (48%), Gaps = 39/457 (8%)
Query: 130 KQLHSQLIRIGFTADVSIETTL-------SNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
K +H L+R +DV + + L S L A +++ N L
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLL 88
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ ++ + A + +M+K + D F ++KA + ++ + G Q HS V+ G
Sbjct: 89 IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGF 148
Query: 243 ESEVSVGTPLVDFYS-------------------------------KCGRFEAACQAFES 271
+++V V LV Y+ KCG E A + F+
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 272 IREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
+ N F+WS +I GY ++ F+KA++ F+ ++ +GV+ N V ++ +C+ + L +G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
+ + +K + L +A++ M+ +CG ++ A F + + D+++W++II A H
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 392 GKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G + +A+ F +M+ G P VTF +L+ACSH GLV++G + ++M +G++P ++H
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD 510
Y C++ + RAG L EA I M +P+ LLG C ++N E A + +
Sbjct: 389 YGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVK 448
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
P S YV + N++A AG WD+ R MM E+ ++K
Sbjct: 449 PEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 204/460 (44%), Gaps = 49/460 (10%)
Query: 6 ISIDPRSYKH----LFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSF 60
I ++ +KH L + C + SD K+ H L R + F+ + +L + D +F
Sbjct: 4 IVLNTLRFKHPKLALLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTF 60
Query: 61 TA-------AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIF 113
A +F ++ + +LF + +I ++ A +++ML I P + F
Sbjct: 61 NKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITF 120
Query: 114 CTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
L+ + ++ + +G+Q HSQ++R GF DV +E +L +MY CG++ A +M
Sbjct: 121 PFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGF 180
Query: 174 KNAVACTGLMVGYTQ------------ALRHTD-------------------ALLLFAKM 202
++ V+ T ++ GY + + H + A+ LF M
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 203 IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRF 262
+EGV +E V V+ +CA L + G + + Y VK + + +GT LVD + +CG
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 263 EAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQAC 322
E A FE + E + SWS+II G G KA+ F + S G I +T + AC
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
Query: 323 SAISDLVYGAQVHADAIK-KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIA 380
S + G +++ + K G+ L ++ M + GKL A L + KP+
Sbjct: 361 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI 420
Query: 381 WTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLN 420
A++ A + +E + ML V+P + LL+
Sbjct: 421 LGALLGACKIYKNTEVAERVGNMLIK-VKPEHSGYYVLLS 459
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 182/336 (54%), Gaps = 5/336 (1%)
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
S LK C D+ G QIH G S+ + T L+D YS C AC+ F+ I +
Sbjct: 117 SFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK 176
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSK--GVILNSFVYTNI-FQACSAISDLVYG 331
+ SW+ + + Y ++ R L F +++ G + V + QAC+ + L +G
Sbjct: 177 RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG 236
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYH 391
QVH + GL L+ + +++MYS+CG +D AYQ F + + + ++WTA+I A +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 392 G-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM-SVKYGVDPTID 449
G EA++ F++ML+ G+ P T GLL+ACSHSGLV EG F D M S ++ + P +
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL 509
HY C++ + RA LL +A +I+SM +PD+ W+TLLG C H ++E + L
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
++ YV + N ++ G W++ + R +M E+ +
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRI 452
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 156/341 (45%), Gaps = 13/341 (3%)
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFS---RMLDLGIKPSSSIFCTLLGSFA 121
RVF + ++ L T+I A++ RLF R L P SS F L
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA--LKCCI 124
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
L G Q+H ++ GF +D + TTL ++Y C A +++ ++ V+
Sbjct: 125 KSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNV 184
Query: 182 LMVGYTQALRHTDALLLFAKM---IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
L Y + R D L+LF KM + VK D + L+ACA L ++ G+Q+H +
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
+ GL +++ LV YS+CG + A Q F +RE N SW+A+I+G +G +A+E
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIE 304
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG---LVQYLSGESAMIT 355
F + G+ T + ACS S LV + D ++ G + L ++
Sbjct: 305 AFNEMLKFGISPEEQTLTGLLSACSH-SGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVD 363
Query: 356 MYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
+ + LD AY ++E KPD+ W ++ A HG E
Sbjct: 364 LLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 155/365 (42%), Gaps = 51/365 (13%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG---NKFIDNCILQMYCDCKSFTAAER 65
+P S K C G L G H ++ ++G + + ++ +Y C++ T A +
Sbjct: 112 NPLSSSFALKCCIKSGDLLGGLQIHGKI--FSDGFLSDSLLMTTLMDLYSTCENSTDACK 169
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM---LDLGIKPSSSIFCTLLGSFAD 122
VFDE+ RD SW + S Y + LF +M +D +KP L + A+
Sbjct: 170 VFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
AL+ GKQ+H + G + +++ TL +MY +CG +D A M +N V+ T L
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 183 MVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL 242
+ G +A+ F +M+K G+ +E + +L AC+ HS GL
Sbjct: 290 ISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACS-----------HS-----GL 333
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
+E G D + G F+ +PN + ++ ++ DKA K+
Sbjct: 334 VAE---GMMFFD-RMRSGEFKI---------KPNLHHYGCVVDLLGRARLLDKAYSLIKS 380
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA-----MITMY 357
+ K +S ++ + AC D+ G +V + I+ L E A ++ Y
Sbjct: 381 MEMKP---DSTIWRTLLGACRVHGDVELGERVISHLIE------LKAEEAGDYVLLLNTY 431
Query: 358 SKCGK 362
S GK
Sbjct: 432 STVGK 436
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 36/274 (13%)
Query: 3 EACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFT 61
+ C+ D + + C LGAL GK H+ + +G + N ++ MY C S
Sbjct: 210 DGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMD 269
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
A +VF M +R++ SW +IS A G AI F+ ML GI P LL + +
Sbjct: 270 KAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACS 329
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK-NAVACT 180
HS L+ G + D K+ + C
Sbjct: 330 -----------HSGLVAEGMM-----------------FFDRMRSGEFKIKPNLHHYGCV 361
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++G + L +L+ +M K D ++ +L AC D+ G ++ S+ ++L
Sbjct: 362 VDLLGRARLLDKAYSLIKSMEM-----KPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
E E L++ YS G++E + ++E
Sbjct: 417 KAE-EAGDYVLLLNTYSTVGKWEKVTELRSLMKE 449
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 250/493 (50%), Gaps = 17/493 (3%)
Query: 63 AERVFDEMVDRD-LFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSF 120
A ++FD+ RD F ++I AY E + L+ + + P + F TL S
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
+ + G QLHSQ+ R GF AD+ + T + +MY K G + A A ++M ++ V+ T
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
L+ GY + A LF +M VK D +++ ++ D+ + R++
Sbjct: 149 ALISGYIRCGELDLASKLFDQM--PHVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMT-- 203
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
V T ++ Y +AA + F+++ E N SW+ +I GYCQ+ + + + F
Sbjct: 204 --HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLF 261
Query: 301 KNIRSKGVILNSFVYTNIFQACSAISD---LVYGAQVHADAIKKGLVQYLSGESAMITMY 357
+ +++ + V I AISD L G H +K L + + +A++ MY
Sbjct: 262 QEMQATTSLDPDDV--TILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 358 SKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEA-VKLFHKMLRSGVRPNAVTFI 416
SKCG+++ A + F + + +W A+I YA +G + A + LF M+ +P+ +T +
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITML 378
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF 476
++ AC+H GLV+EG+++ M + G++ I+HY CM+ + RAG L+EA ++I +MPF
Sbjct: 379 AVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF 437
Query: 477 EPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQY 536
EP+ + + L C ++++E A K L+P + YV + NL+A WD+
Sbjct: 438 EPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMV 497
Query: 537 RKMMAERNLRKEV 549
+ +M + +KEV
Sbjct: 498 KNVMRKNQAKKEV 510
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 9/300 (3%)
Query: 3 EACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFT 61
E C + D ++ L K C + + G H+++ R + ++ ++ MY
Sbjct: 71 ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMG 130
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
A FDEM R SW +IS Y G + A +LF +M + I+ ++ F
Sbjct: 131 CARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFV 187
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+ ++L ++ V TT+ + Y +D A + M +N V+
Sbjct: 188 KSGDMTSARRLFDEMTH----KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNT 243
Query: 182 LMVGYTQALRHTDALLLFAKM-IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++ GY Q + + + LF +M + D+ VL A + ++ G H + +
Sbjct: 244 MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
L+ +V V T ++D YSKCG E A + F+ + E SW+A+I GY +G AL+ F
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 3/254 (1%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM-LDLGIKP 108
++ YC+ K AA ++FD M +R+L SW T+I Y + IRLF M + P
Sbjct: 213 MIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDP 272
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
++L + +D AL LG+ H + R V + T + +MY KCG ++ A+
Sbjct: 273 DDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIF 332
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
++M K + ++ GY AL LF M+ E K DE V+ AC +
Sbjct: 333 DEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVE 391
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGY 287
GR+ ++GL +++ +VD + G + A ++ EPN S+ ++
Sbjct: 392 EGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSAC 451
Query: 288 CQSGRFDKALETFK 301
Q ++A K
Sbjct: 452 GQYKDIERAERILK 465
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 3 EACISIDPRSYKHLFKMCGM--LGALSDGKLFHNRLQRMANGNKF-IDNCILQMYCDCKS 59
+A S+DP L + + GALS G+ H +QR K + IL MY C
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
A+R+FDEM ++ + SW +I YA G+ A+ LF M+ + KP ++ +
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITA 383
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+E G++ + +G A + C
Sbjct: 384 CNHGGLVEEGRKWFHVMREMGLNAKIE-----------------------------HYGC 414
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
++G +L+ + L+ G+ L F L AC KDI +I +V+
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSF-----LSACGQYKDIERAERILKKAVE 469
Query: 240 LGLESE 245
L +++
Sbjct: 470 LEPQND 475
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 230/483 (47%), Gaps = 2/483 (0%)
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
+A ++FD +R +F W +II AYA+ + LFS++L +P + + L F+
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+ + + +H I G D + + Y K G + A + +
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
+++GY + LF M G + + + + + +H++ +K+
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
L+S VG LV+ YS+C +AC F SI EP+ + S++ITGY + G +AL F
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+R G + + + +C+ +SD V G +VH+ I+ GL + SA+I MYSKCG
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 362 KLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLN 420
L A F I + + +++ ++I HG S A + F ++L G+ P+ +TF LL
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLC 417
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
C HSGL+ +G++ + M ++G++P +HY M+ + AG L+EA E + S+ D+
Sbjct: 418 TCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDS 477
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMF-NLHALAGNWDEAAQYRKM 539
LL C H N A + A I + Y M N++A G WDE + R
Sbjct: 478 GILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDG 537
Query: 540 MAE 542
++E
Sbjct: 538 ISE 540
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 184/397 (46%), Gaps = 3/397 (0%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
I++ Y A ++F + D DL W +I Y G I LF+ M G +P+
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN 206
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
L DPS L + +H+ ++I + + L NMY +C + A N
Sbjct: 207 CYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFN 266
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
++ + VAC+ L+ GY++ H +AL LFA++ G K D + +IVL +CA L D +
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVS 326
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ 289
G+++HSY ++LGLE ++ V + L+D YSKCG + A F I E N S++++I G
Sbjct: 327 GKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGL 386
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYLS 348
G A E F I G+I + ++ + C L G ++ + G+
Sbjct: 387 HGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTE 446
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKP--DTIAWTAIICAYAYHGKSEAVKLFHKMLRS 406
M+ + GKL+ A++ ++++KP I + C + A + + ++
Sbjct: 447 HYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKN 506
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYG 443
G +V + L N + G E ++ D +S YG
Sbjct: 507 GEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYG 543
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 176/371 (47%), Gaps = 3/371 (0%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
++LHS + + D T L+ Y L A + ++ ++ Y +A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
+ T L LF+++++ + D F ++ + + + D R IH ++ GL + G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
+ +V YSK G A + F SI +P+ W+ +I GY G +DK + F ++ +G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
N + + S L+ VHA +K L + A++ MYS+C + A
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 370 FLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F +I +PD +A +++I Y+ G EA+ LF ++ SG +P+ V +L +C+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
GK+ + S ++ G++ I + +I +YS+ GLL+ A+ + +P E + +S+ +L+
Sbjct: 325 VSGKE-VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLIL 382
Query: 489 GCWSHRNLETA 499
G H TA
Sbjct: 383 GLGLHGFASTA 393
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 41 NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSR 100
+ + ++ ++ MY C +A VF+ + + DL + +++I+ Y+ G+ A+ LF+
Sbjct: 239 DSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAE 298
Query: 101 MLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW 160
+ G KP + +LGS A+ S GK++HS +IR+G D+ + + L +MY KCG
Sbjct: 299 LRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGL 358
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA 220
L A + KN V+ L++G + A F ++++ G+ DE FS +L
Sbjct: 359 LKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCT 418
Query: 221 CAALKDINTGRQI-HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND 277
C +N G++I + G+E + +V G+ E A + S+++P D
Sbjct: 419 CCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPID 476
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 228/459 (49%), Gaps = 44/459 (9%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKC------GWLDGAEVATNKMTTKNAVACTGLM 183
+Q+H++L G D L ++K +LD A ++ A ++
Sbjct: 23 RQIHAKLYVDGTLKD----DHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 184 VGYTQALRHTDALLLFAKMIKEG--VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
+ ++ + + +++ G +K D + + +++AC L+ TG Q+H +++ G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 242 LESEVSVGTPLVDFYS-------------------------------KCGRFEAACQAFE 270
+++ V T L+ Y+ +CG A + FE
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 271 SIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVY 330
+ E + +W+A+I+GY Q G +AL F ++ +GV +N ++ AC+ + L
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 331 GAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAY 390
G H+ + + + + ++ +Y+KCG ++ A + F +E+ + W++ + A
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 391 HGKSEA-VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
+G E ++LF M + GV PNAVTF+ +L CS G V EG++ DSM ++G++P ++
Sbjct: 319 NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLE 378
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL 509
HY C++ +Y+RAG L++A+ +I+ MP +P W +LL ++NLE +A+ K+ L
Sbjct: 379 HYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
+ + YV + N++A + +WD + R+ M + +RK+
Sbjct: 439 ETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 57 CKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTL 116
C A ++F+ M +RD +W +IS YA+ G A+ +F M G+K + ++
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 117 LGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNA 176
L + AL+ G+ HS + R V + TTL ++Y KCG ++ A M KN
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG-RQIHS 235
+ + G L LF+ M ++GV + F VL+ C+ + ++ G R S
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFD 294
+ G+E ++ LVD Y++ GR E A + + +P+ WS+++ + R
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL----HASRMY 422
Query: 295 KALE 298
K LE
Sbjct: 423 KNLE 426
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 20 CGMLGALSDGKLFHNRLQRMANGNKF-----IDNCILQMYCDCKSFTAAERVFDEMVDRD 74
C LGAL G+ H+ ++R NK + ++ +Y C A VF M +++
Sbjct: 250 CTQLGALDQGRWAHSYIER----NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
+++W++ ++ A G + LFS M G+ P++ F ++L + ++ G Q H
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHF 364
Query: 135 QLIRIGFTADVSIET--TLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRH 192
+R F + +E L ++Y + G L+ A +M K A ++ ++ ++
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKN 424
Query: 193 TDALLLFAKMIKE 205
+ +L +K + E
Sbjct: 425 LELGVLASKKMLE 437
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/578 (27%), Positives = 274/578 (47%), Gaps = 93/578 (16%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
+L CD A +FDEM +R++ SW T+++ G M A ++F M PS
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM------PS 197
Query: 110 SSI--FCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
+ + ++ + + +E K L G ++ ++ T S +Y C + D E
Sbjct: 198 RDVVSWNAMIKGYIENDGMEEAKLL------FGDMSEKNVVTWTSMVYGYCRYGDVREAY 251
Query: 168 T--NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE--GVKLDEFVFSIVLKACAA 223
+M +N V+ T ++ G+ + +AL+LF +M K+ V + + AC
Sbjct: 252 RLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGG 311
Query: 224 L--KDINTGRQIHSYSVKLGLES--------------------------------EVSVG 249
L + G Q+H+ + G E+ ++
Sbjct: 312 LGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC 371
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPND-FSWSAIITGYCQSGRFDKALETFKNIRSKG- 307
+++ Y K G E A FE ++ +D SW+++I GY ++G +A F+ + K
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 308 ----VILNSFVYTNIF-QACSAISDLV-------------------------YGAQVHAD 337
V+++ V +F +A S +SD+V G +H
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHC- 490
Query: 338 AIKKGLVQY---LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS 394
I K Y L ++++++MY+KCG ++ AY+ F + + DT++W ++I ++HG +
Sbjct: 491 VIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLA 550
Query: 395 E-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
+ A+ LF +ML SG +PN+VTF+G+L+ACSHSGL+ G + +M Y + P IDHY
Sbjct: 551 DKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS 610
Query: 454 MIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGC---WSHRNLE-TASIAAGKIFHL 509
MI + RAG L+EA E I ++PF PD + LLG C W ++ E A AA ++ L
Sbjct: 611 MIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLEL 670
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
DP+++ +V + N++A G D + RK M + ++K
Sbjct: 671 DPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKK 708
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 159/352 (45%), Gaps = 61/352 (17%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
+ L ++ + G V T+L + Y K G+LD A V M +N V C ++ GY +
Sbjct: 62 RHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKC 121
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
R +A LF +M K V S++V L
Sbjct: 122 RRMNEAWTLFREMPKNVV---------------------------SWTVML--------- 145
Query: 250 TPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
T L D GR E A + F+ + E N SW+ ++TG ++G +KA + F + S+ V+
Sbjct: 146 TALCDD----GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV 201
Query: 310 -LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
N+ + I + L++G D +K +V + S M+ Y + G + AY+
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFG-----DMSEKNVVTWTS----MVYGYCRYGDVREAYR 252
Query: 369 AFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLR--SGVRPNAVTFIGLLNACSHS 425
F + + + ++WTA+I +A++ EA+ LF +M + V PN T I L AC
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 426 GL--VKEGKQFLDSMSVKYGVDPTIDH----YNCMIGVYSRAGLLQEALEMI 471
G+ + G+Q L + + G + T+DH ++ +Y+ +GL+ A ++
Sbjct: 313 GVEFRRLGEQ-LHAQVISNGWE-TVDHDGRLAKSLVHMYASSGLIASAQSLL 362
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 167/391 (42%), Gaps = 26/391 (6%)
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
E VD D +++ YA G + A L + DL S +I ++ + LE
Sbjct: 333 ETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL---QSCNI---IINRYLKNGDLER 386
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
+ L R+ D T++ + Y++ G + A K+ K+ V T ++ G Q
Sbjct: 387 AETLFE---RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQ 443
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG--LESEV 246
+A L + M++ G+K +S++L + A +++ G+ IH K + ++
Sbjct: 444 NELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDL 503
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
+ LV Y+KCG E A + F + + + SW+++I G G DKAL FK +
Sbjct: 504 ILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQV-----HADAIKKGLVQYLSGESAMITMYSKCG 361
G NS + + ACS + G ++ +I+ G+ Y+S MI + + G
Sbjct: 564 GKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS----MIDLLGRAG 619
Query: 362 KLDYAYQAFLTIE-KPDTIAWTAI--ICAYAYHGK-SEAVKLFHKMLRSGVRP-NAVTFI 416
KL A + + PD + A+ +C + K +E + M + P NA +
Sbjct: 620 KLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHV 679
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPT 447
L N + G K+ M +K GV T
Sbjct: 680 ALCNVYAGLGRHDMEKEMRKEMGIK-GVKKT 709
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMA---NGNKFIDNCILQMYCDCKSFTAAERVFD 68
+Y L G L GK H + + + + + N ++ MY C + A +F
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
+MV +D SW ++I + G A+ LF MLD G KP+S F +L + + +
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 129 GKQL 132
G +L
Sbjct: 588 GLEL 591
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 202/388 (52%), Gaps = 38/388 (9%)
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVD 254
A LL+ +++ + +EF FS +LK+C+ +G+ IH++ +K GL + V T LVD
Sbjct: 114 AFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVD 169
Query: 255 FYSK---------------------------C----GRFEAACQAFESIREPNDFSWSAI 283
Y+K C G EAA F+S+ E + SW+ +
Sbjct: 170 VYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVM 229
Query: 284 ITGYCQSGRFDKALETFKNIRSKGVI-LNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
I GY Q G + AL F+ + ++G + ACS I L G +H
Sbjct: 230 IDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR 289
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFH 401
+ + + +I MYSKCG L+ A F + D +AW A+I YA HG S+ A++LF+
Sbjct: 290 IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFN 349
Query: 402 KMLR-SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSR 460
+M +G++P +TFIG L AC+H+GLV EG + +SM +YG+ P I+HY C++ + R
Sbjct: 350 EMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGR 409
Query: 461 AGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTM 520
AG L+ A E I++M + D++ W ++LG C H + A + L+ +S YV +
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLL 469
Query: 521 FNLHALAGNWDEAAQYRKMMAERNLRKE 548
N++A G+++ A+ R +M E+ + KE
Sbjct: 470 SNIYASVGDYEGVAKVRNLMKEKGIVKE 497
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 158/362 (43%), Gaps = 39/362 (10%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
+F + +D DLF + I+ + G A L+ ++L I P+ F +LL S + S
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS- 144
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV- 184
GK +H+ +++ G D + T L ++Y K G + A+ ++M ++ V+ T ++
Sbjct: 145 ---GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 185 ------------------------------GYTQALRHTDALLLFAKMIKEG-VKLDEFV 213
GY Q DAL+LF K++ EG K DE
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 214 FSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR 273
L AC+ + + TGR IH + + V V T L+D YSKCG E A F
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 274 EPNDFSWSAIITGYCQSGRFDKALETFKNIRS-KGVILNSFVYTNIFQACSAISDLVYGA 332
+ +W+A+I GY G AL F ++ G+ + QAC+ + G
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 333 QVHADAIKK-GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAY 390
++ ++ G+ + ++++ + G+L AY+ + D++ W++++ +
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 391 HG 392
HG
Sbjct: 442 HG 443
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 144/308 (46%), Gaps = 20/308 (6%)
Query: 38 RMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRL 97
RM + ++ Y + AA +FD M +RD+ SW +I YA+ G A+ L
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALML 245
Query: 98 FSRMLDLG-IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYI 156
F ++L G KP L + + ALE G+ +H + +V + T L +MY
Sbjct: 246 FQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYS 305
Query: 157 KCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFS 215
KCG L+ A + N K+ VA ++ GY DAL LF +M G++ + F
Sbjct: 306 KCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Query: 216 IVLKACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
L+ACA +N G R S + G++ ++ LV + G+ + +A+E+I+
Sbjct: 366 GTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLK---RAYETIKN 422
Query: 275 PN----DFSWSAIITGYCQ-SGRFDKALETFK-----NIRSKGV-ILNSFVYTNI--FQA 321
N WS+++ G C+ G F E + NI++ G+ +L S +Y ++ ++
Sbjct: 423 MNMDADSVLWSSVL-GSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEG 481
Query: 322 CSAISDLV 329
+ + +L+
Sbjct: 482 VAKVRNLM 489
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 45/274 (16%)
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY 315
Y+ G+ + F +P+ F ++A I +G D+A + + S + N F +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 316 TNIFQACSAISDLVYGAQVHADAIKKGL-------------------------------V 344
+++ ++CS S G +H +K GL
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKM 403
+ L +AMIT Y+K G ++ A F ++ + D ++W +I YA HG ++A+ LF K+
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 404 LRSG-VRPNAVTFIGLLNACSHSGLVKEGK---QFLDSMSVKYGVDPTIDHYNCMIGVYS 459
L G +P+ +T + L+ACS G ++ G+ F+ S ++ V +I +YS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTG----LIDMYS 305
Query: 460 RAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSH 493
+ G L+EA+ + P D ++W ++ G H
Sbjct: 306 KCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMH 338
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 333 QVHADAIKKGLV---QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYA 389
Q+HA ++ L+ +Y + Y+ GK+ ++ F PD +TA I +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 390 YHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY--GVDP 446
+G K +A L+ ++L S + PN TF LL +CS K GK + + +K+ G+DP
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGK-LIHTHVLKFGLGIDP 161
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR-NLETASIAAGK 505
+ ++ VY++ G + A ++ MP +L T + C++ + N+E A
Sbjct: 162 YV--ATGLVDVYAKGGDVVSAQKVFDRMP--ERSLVSSTAMITCYAKQGNVEAARALFDS 217
Query: 506 IFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
+ D + + + H D ++K++AE
Sbjct: 218 MCERDIVSWNVMIDGYAQHGFPN--DALMLFQKLLAE 252
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 206/417 (49%), Gaps = 41/417 (9%)
Query: 171 MTTKNAVACTGL------MVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAA 223
M++ A +CT L + Y H AL LF +M + LD VFS+ LK+CAA
Sbjct: 1 MSSSYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAA 60
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAI 283
G +H++SVK S VG L+D Y KC A + F+ I + N W+A+
Sbjct: 61 AFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAM 120
Query: 284 ITGYCQSGRFDKALETFK------NIRSKGVILNSFVYTN-------------------- 317
I+ Y G+ +A+E ++ N S I+ V T
Sbjct: 121 ISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKP 180
Query: 318 -------IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
+ ACSAI ++H+ A + + + +S ++ Y +CG + Y F
Sbjct: 181 NLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF 240
Query: 371 LTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVK 429
++E D +AW+++I AYA HG +E A+K F +M + V P+ + F+ +L ACSH+GL
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD 300
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
E + M YG+ + DHY+C++ V SR G +EA ++I++MP +P +W LLG
Sbjct: 301 EALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGA 360
Query: 490 CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
C ++ +E A IAA ++ ++P + A YV + ++ G +EA + R M E ++
Sbjct: 361 CRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVK 417
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 169/383 (44%), Gaps = 42/383 (10%)
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRM-LDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
L S +S+YA +G+ A+ LF +M + + +F L S A LG +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
+ ++ F ++ + L +MY KC + A +++ +NAV ++ YT +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 194 DALLLFAKM-----------IKEGV---------------KLDEFVFS-------IVLKA 220
+A+ L+ M I +G+ K+ EF F ++ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 221 CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSW 280
C+A+ ++IHSY+ + +E + + LV+ Y +CG F+S+ + + +W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 281 SAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS----AISDLVYGAQVHA 336
S++I+ Y G + AL+TF+ + V + + N+ +ACS A LVY ++
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI-EKPDTIAWTAIICAYAYHGKSE 395
D GL S ++ + S+ G+ + AY+ + EKP W A++ A +G+ E
Sbjct: 312 D---YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE 368
Query: 396 AVKLFHKMLRSGVRPNAVTFIGL 418
++ + L N ++ L
Sbjct: 369 LAEIAARELLMVEPENPANYVLL 391
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 44/287 (15%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGH------------ 90
N F+ +L MY C S + A ++FDE+ R+ W +IS Y G
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 91 --------------MIG-------AIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELG 129
++G AI + +M++ KP+ L+ + + A L
Sbjct: 142 VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
K++HS R +++ L Y +CG + ++ + M ++ VA + L+ Y
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC--AALKD---INTGRQIHSYSVKLGLES 244
AL F +M V D+ F VLKAC A L D + R Y GL +
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDY----GLRA 317
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIRE-PNDFSWSAIITGYCQS 290
+ LVD S+ GRFE A + +++ E P +W A++ G C++
Sbjct: 318 SKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL-GACRN 363
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 175/300 (58%), Gaps = 3/300 (1%)
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG-VIL 310
+++ Y+ G EA + F+ + E N FSW+ +I GY Q+GR + L +FK + +G V+
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 311 NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESAMITMYSKCGKLDYAYQA 369
N T + AC+ + +G VH G + ++ ++A+I MY KCG ++ A +
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 370 FLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F I++ D I+W +I A HG +EA+ LFH+M SG+ P+ VTF+G+L AC H GLV
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLV 306
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
++G + +SM + + P I+H C++ + SRAG L +A+E I MP + D + W TLLG
Sbjct: 307 EDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Query: 489 GCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
++ ++ +A ++ L+P + A +V + N++ AG +D+AA+ + M + +KE
Sbjct: 367 ASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 169/384 (44%), Gaps = 18/384 (4%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
+ M C +A +VF EMV++++ W ++I+ Y ++ A R F DL +
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF----DLSPERD 89
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
++ T++ + + + + L Q+ DV T+ Y G ++ E +
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQMP----CRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 170 KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDIN 228
M +N + GL+ GY Q R ++ L F +M+ EG V ++ ++VL ACA L +
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 229 TGRQIHSYSVKLGLES-EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
G+ +H Y LG +V+V L+D Y KCG E A + F+ I+ + SW+ +I G
Sbjct: 206 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 265
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI----SDLVYGAQVHADAIKKGL 343
G +AL F +++ G+ + + + AC + L Y + D +
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF---SI 322
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHK 402
+ + ++ + S+ G L A + + K D + W ++ A + K + ++ +
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
Query: 403 MLRSGVRPNAVTFIGLLNACSHSG 426
L N F+ L N +G
Sbjct: 383 ELIKLEPRNPANFVMLSNIYGDAG 406
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 232/483 (48%), Gaps = 35/483 (7%)
Query: 12 SYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMV 71
+Y L + C G++ G++ H R + F++ +L MY C A +VFD M
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR 142
Query: 72 DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQ 131
+R+LF+W+ +I AY+ E +LF M+ G+ P +F +L A+ +E GK
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
+HS +I++G ++ + + ++ +Y KCG LD A +M ++ +A +++ Y Q +
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTP 251
H +A+ L +M KEG+ ++I++ L + + G+ ++V
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV----- 317
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILN 311
F+W+A+I+G +G +AL+ F+ + GV+ N
Sbjct: 318 --------------------------FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 312 SFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFL 371
+ + ACS + + G++VH+ A+K G + + ++++ MYSKCGKL+ A + F
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 372 TIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKE 430
+++ D W ++I Y G +A +LF +M + +RPN +T+ +++ +G E
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 431 GKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLL 487
M V +N +I Y + G EALE+ R M F P++++ +LL
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 488 GGC 490
C
Sbjct: 532 PAC 534
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 230/477 (48%), Gaps = 31/477 (6%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
D+F+W +IS G A+ +F +M G+ P++ + + + + + G ++H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
S +++GF DV + +L +MY KCG L+ A + + K+ ++ GY QA
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
A LF +M ++ +I T + S +K G E E +
Sbjct: 436 KAYELFTRMQDANLR----------------PNIITWNTMISGYIKNGDEGEA------M 473
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
D + R E + + N +W+ II GY Q+G+ D+ALE F+ ++ + NS
Sbjct: 474 DLFQ---RMEKDGKV-----QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI 373
++ AC+ + ++H +++ L + ++A+ Y+K G ++Y+ FL +
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 374 EKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
E D I W ++I Y HG A+ LF++M G+ PN T ++ A G V EGK
Sbjct: 586 ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWS 492
+ S++ Y + P ++H + M+ +Y RA L+EAL+ I+ M + +T W++ L GC
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 493 HRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
H +++ A AA +F L+P ++AT + ++AL + + K + L+K +
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPL 762
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 205/408 (50%), Gaps = 47/408 (11%)
Query: 89 GHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG-FT-ADVS 146
G ++ A + + G K S + LL S D ++ LG+ LH+ R G FT DV
Sbjct: 60 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVF 116
Query: 147 IETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG 206
+ET L +MY KCG + A + M +N + ++ Y++ R + LF M+K+G
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 207 VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC 266
V D+F+F +L+ CA D+ G+ IHS +KLG+ S + V ++ Y+KCG + A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS 326
+ F +RE + +W++++ YCQ+G+ ++A+E K + +G
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG------------------- 277
Query: 327 DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWT 382
I GLV + + +I Y++ GK D A +E D WT
Sbjct: 278 ------------ISPGLVTW----NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 383 AIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
A+I ++G + +A+ +F KM +GV PNAVT + ++ACS ++ +G + + S++VK
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE-VHSIAVK 380
Query: 442 YGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
G + N ++ +YS+ G L++A ++ S+ D +W +++ G
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSMITG 427
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 268 AFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD 327
+F +EPN C++G +A + ++ +G + Y + ++C
Sbjct: 38 SFTKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGS 96
Query: 328 LVYGAQVHADAIKKGLVQY--LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
+ G +HA + GL + E+ +++MY+KCG + A + F ++ + + W+A+I
Sbjct: 97 IHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMI 153
Query: 386 CAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
AY+ + E KLF M++ GV P+ F +L C++ G V+ GK + S+ +K G+
Sbjct: 154 GAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK-VIHSVVIKLGM 212
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLL 487
+ N ++ VY++ G L A + R M E D ++W ++L
Sbjct: 213 SSCLRVSNSILAVYAKCGELDFATKFFRRMR-ERDVIAWNSVL 254
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 112/244 (45%), Gaps = 10/244 (4%)
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
D V R+ +W II+ Y + G A+ LF +M P+S +LL + A+ +
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYT 187
+ +++H ++R A +++ L++ Y K G ++ + M TK+ + L+ GY
Sbjct: 542 MVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYV 601
Query: 188 QALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-----HSYSVKLGL 242
+ AL LF +M +G+ + S ++ A + +++ G+++ + Y + L
Sbjct: 602 LHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPAL 661
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS-WSAIITGYCQSGRFDKALETFK 301
E + +V Y + R E A Q + + ++ W + +TG G D A+ +
Sbjct: 662 EH----CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAE 717
Query: 302 NIRS 305
N+ S
Sbjct: 718 NLFS 721
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 193/356 (54%), Gaps = 12/356 (3%)
Query: 200 AKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKC 259
A+++ G+ D FV + +L ++ D+ + +++ S L + SV V+ Y+K
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSV----VNAYAKA 141
Query: 260 GRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG-----VILNSFV 314
G + A + F+ + E N SWS +I GY G++ +AL+ F+ ++ V N F
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI- 373
+ + AC + L G VHA K + + +A+I MY+KCG L+ A + F +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 374 EKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRS-GVRPNAVTFIGLLNACSHSGLVKEG 431
K D A++A+IC A +G E +LF +M S + PN+VTF+G+L AC H GL+ EG
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 432 KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCW 491
K + M ++G+ P+I HY CM+ +Y R+GL++EA I SMP EPD L W +LL G
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 492 SHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+++T A ++ LDP++S YV + N++A G W E R M + + K
Sbjct: 382 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK 437
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 174/410 (42%), Gaps = 45/410 (10%)
Query: 76 FSWATIISAYAEE---GHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQL 132
F W II A I ++ RM + + P F LL SF +P L LG++
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 133 HSQLIRIGFTADVSIETTLSNMYIKC-------------------------------GWL 161
H+Q++ G D + T+L NMY C G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 162 DGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI-----KEGVKLDEFVFSI 216
D A ++M +N ++ + L+ GY ++ +AL LF +M + V+ +EF S
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
VL AC L + G+ +H+Y K +E ++ +GT L+D Y+KCG E A + F ++
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 277 DF-SWSAIITGYCQSGRFDKALETFKNI-RSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
D ++SA+I G D+ + F + S + NS + I AC + G
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 335 HADAIKK-GLVQYLSGESAMITMYSKCGKLDYA--YQAFLTIEKPDTIAWTAIICAYAYH 391
I++ G+ + M+ +Y + G + A + A + +E PD + W +++
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME-PDVLIWGSLLSGSRML 383
Query: 392 GKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
G + + K L N+ ++ L N + +G E K M VK
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVK 433
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 40/286 (13%)
Query: 41 NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSR 100
+ + F+ +L MY C +A+RVFD+ +DL +W ++++AYA+ G + A +LF
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 101 M------------------------LDLG------------IKPSSSIFCTLLGSFADPS 124
M LDL ++P+ T+L +
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
ALE GK +H+ + + D+ + T L +MY KCG L+ A+ N + +K V M+
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 185 GYTQALRHTDALL-LFAKM-IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV-KLG 241
TD LF++M + + + F +L AC IN G+ + + G
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITG 286
+ + +VD Y + G + A S+ EP+ W ++++G
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 4/193 (2%)
Query: 2 DEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRM-ANGNKFIDNCILQMYCDCKSF 60
+EA + + + + CG LGAL GK H + + + + ++ MY C S
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 61 TAAERVFDEM-VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL-GIKPSSSIFCTLLG 118
A+RVF+ + +D+ +++ +I A G +LFS M I P+S F +LG
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 119 SFADPSALELGKQLHSQLI-RIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV 177
+ + GK +I G T + + ++Y + G + AE M + V
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 178 ACTGLMVGYTQAL 190
G ++ ++ L
Sbjct: 371 LIWGSLLSGSRML 383
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 229/481 (47%), Gaps = 56/481 (11%)
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM---- 171
LL A S L GK+LH+ L G + + LSN + G V K+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKK--APRSYLSNALFQFYASSGEMVTAQKLFDEI 69
Query: 172 --TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
+ K+ V T L+ +++ +++ LF +M ++ V++D+ + CA L+D+
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR---------------------------- 261
+Q H +VK+G+ + V V L+D Y KCG
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 262 ---FEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSK-GVILNSFVYTN 317
E + F + E N +W+ ++ GY +G + LE + + G LN +
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGE----------SAMITMYSKCGKLDYAY 367
+ AC+ +LV G VH A+KK + + GE +A++ MY+KCG +D +
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKK---EMMMGEEASYDDVMVGTALVDMYAKCGNIDSSM 306
Query: 368 QAFLTIEKPDTIAWTAIICAYAYHGKSEAV-KLFHKMLRSGVRPNAVTFIGLLNACSHSG 426
F + K + + W A+ A HGK V +F +M+R V+P+ +TF +L+ACSHSG
Sbjct: 307 NVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSG 365
Query: 427 LVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTL 486
+V EG + S+ YG++P +DHY CM+ + RAGL++EA ++R MP P+ + +L
Sbjct: 366 IVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSL 424
Query: 487 LGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLR 546
LG C H +E A ++ + P ++ + M N++ G D A R + +R +R
Sbjct: 425 LGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIR 484
Query: 547 K 547
K
Sbjct: 485 K 485
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/527 (22%), Positives = 219/527 (41%), Gaps = 66/527 (12%)
Query: 16 LFKMCGMLGALSDGKLFHNRLQRMANGNK-----FIDNCILQMYCDCKSFTAAERVFDE- 69
L + C L GK H L +G K ++ N + Q Y A+++FDE
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLT--TSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEI 69
Query: 70 -MVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
+ ++D W T++S+++ G ++ +++LF M ++ L G A L
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCG-------------------W--------- 160
+Q H +++G V + L +MY KCG W
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 161 ---LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI-KEGVKLDEFVFSI 216
L+ ++M +NAVA T ++ GY A + L L A+M+ + G L+
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 217 VLKACAALKDINTGRQIHSYSVK----LGLES---EVSVGTPLVDFYSKCGRFEAACQAF 269
+L ACA ++ GR +H Y++K +G E+ +V VGT LVD Y+KCG +++ F
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
+R+ N +W+A+ +G G+ ++ F + + V + +T + ACS +
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVD 368
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAY 388
G + GL + + M+ + + G ++ A + P+ + +++ +
Sbjct: 369 EGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSC 428
Query: 389 AYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSG-----------LVKEGKQFLDS 437
+ HGK E + + L N I + N G L K G + +
Sbjct: 429 SVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPG 488
Query: 438 MSVKYGVDPTIDHYNCMIGVYSRAG----LLQEALEMIRSMPFEPDT 480
+S Y V+ ++ ++ + R L E +E IRS + PD
Sbjct: 489 LSSIY-VNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDV 534
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 209/427 (48%), Gaps = 40/427 (9%)
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQAL--RHTDALLLFAKMIKEGV-KLDEFVFSIV 217
L A ++ + N ++ Y+ +L + A F M+ V + + F++ +V
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 218 LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY-SKCGRFEAACQAFESIREPN 276
LK+ L + +H++ K G V V T L+ Y S A Q F+ + E N
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGV-----IL--------------------- 310
SW+A+++GY +SG A+ F+++ + V IL
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 311 ------NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
N + AC+ L +HA A ++ L + ++++ +Y KCG L+
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLE 312
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLR---SGVRPNAVTFIGLLN 420
A F K AW ++I +A HG+SE A+ +F +M++ + ++P+ +TFIGLLN
Sbjct: 313 EASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
AC+H GLV +G+ + D M+ ++G++P I+HY C+I + RAG EALE++ +M + D
Sbjct: 373 ACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADE 432
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
W +LL C H +L+ A +A + L+P + M NL+ GNW+EA + RKM+
Sbjct: 433 AIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMI 492
Query: 541 AERNLRK 547
+N K
Sbjct: 493 KHQNAYK 499
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 19/313 (6%)
Query: 10 PRSYKHLFKMCGMLGALSDGKLFHNR-------------LQRMANGNKFIDNCILQMYCD 56
P + HLFK L + L H+ M+ N +L Y
Sbjct: 146 PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYAR 205
Query: 57 CKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCT 115
+ A +F++M +RD+ SW I++A + G + A+ LF RM+ + I+P+
Sbjct: 206 SGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC 265
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
+L + A L+L K +H+ R ++DV + +L ++Y KCG L+ A + K+
Sbjct: 266 VLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKS 325
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIK---EGVKLDEFVFSIVLKACAALKDINTGRQ 232
A ++ + R +A+ +F +M+K +K D F +L AC ++ GR
Sbjct: 326 LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG 385
Query: 233 IHSY-SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS-WSAIITGYCQS 290
+ + G+E + L+D + GRF+ A + +++ D + W +++
Sbjct: 386 YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
Query: 291 GRFDKALETFKNI 303
G D A KN+
Sbjct: 446 GHLDLAEVAVKNL 458
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 31/347 (8%)
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS-KCGRFEAACQ 267
L++F+ +++ K+ + +N +Q+ S+ + GL + L+ F + + A
Sbjct: 23 LNQFISAVISKS----RHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARF 78
Query: 268 AFESIREPNDFSWSAIITGYCQSGRF--DKALETFKNIRSKGVIL-NSFVYTNIFQACSA 324
F+ PN ++A++T Y S A F+ + ++ V N F+Y + ++
Sbjct: 79 IFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPY 138
Query: 325 ISDLVYGAQVHADAIKKGLVQYLSGESAMITMY-SKCGKLDYAYQAFLTIEKPDTIAWTA 383
+S VH K G Y+ ++A++ Y S + A Q F + + + ++WTA
Sbjct: 139 LSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTA 198
Query: 384 IICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY 442
++ YA G S AV LF M V ++ +L AC+ +GL E M +
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERDVP----SWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPD-------TLSWKTLLGGCWSHRN 495
+ P C++ ++ G LQ A + I + + D + S L G C N
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLA-KGIHAFAYRRDLSSDVFVSNSLVDLYGKCG---N 310
Query: 496 LETASIAAGKIFHLDPLDSAT-YVTMFNLHALAGNWDEA-AQYRKMM 540
LE AS +F + S T + +M N AL G +EA A + +MM
Sbjct: 311 LEEAS----SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 244/484 (50%), Gaps = 7/484 (1%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
+FDEM +RD+ SW T+IS G IR+F M I+P+ F ++L S +
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-SILASLV--TC 148
Query: 126 LELGKQLHSQLIRIGFTA-DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
+ G+Q+H I G + ++ + ++ +MY + G D A M ++ V+ L++
Sbjct: 149 VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES 244
+ + AL F M + ++ DE+ S+V+ C+ L++++ G+Q + +K+G S
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 245 EVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
V +D +SKC R + + + F + + + +++I Y + AL F
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
++ V + F ++++ + +A+ L +GA VH+ IK G + ++++ MY K G +D
Sbjct: 329 TQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVD 387
Query: 365 YAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKML-RSGVRPNAVTFIGLLNAC 422
A F + D I W +I A + ++ E++ +F+++L ++P+ VT +G+L AC
Sbjct: 388 LAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC 447
Query: 423 SHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLS 482
++G V EG Q SM +GV+P +HY C+I + R G++ EA ++ +PFEP +
Sbjct: 448 CYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHI 507
Query: 483 WKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
W+ +L + A A + +P S Y+ + ++ + W+ + + R M E
Sbjct: 508 WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNE 567
Query: 543 RNLR 546
L+
Sbjct: 568 HKLK 571
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 12/352 (3%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
N + N ++ MY F A VF M DRD+ SW +I + ++ G+ A+ F M
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR 227
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
++ I+P ++ +D L GKQ + I++GF ++ + +M+ KC LD
Sbjct: 228 EMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLD 287
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
+ ++ ++V C ++ Y+ DAL LF + + V+ D+F FS VL +
Sbjct: 288 DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMN 347
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSA 282
A+ ++ G +HS +KLG + + +V T L++ Y K G + A F + W+
Sbjct: 348 AVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNT 406
Query: 283 IITGYCQSGRFDKALETFKN-IRSKGVILNSFVYTNIFQACSAISDLVYGAQV-----HA 336
+I G ++ R ++L F + ++ + + I AC + G Q+ A
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKA 466
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICA 387
+ G Y + +I + + G ++ A I +P + W I+CA
Sbjct: 467 HGVNPGNEHY----ACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCA 514
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 183/415 (44%), Gaps = 39/415 (9%)
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTA------------------------ 143
PSS F L+ + L K +H+QL+ GF
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 144 --DVSIETTLS-----NMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDAL 196
D+ + T++ K G+L+ A ++M ++ V+ ++ G H +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLES-EVSVGTPLVDF 255
+F M + ++ EF FSI+ ++ G QIH ++ G+ + V ++D
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY 315
Y + G F+ A F ++ + + SW+ +I SG + AL+ F +R + + +
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 316 TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK 375
+ + CS + +L G Q A IK G + A I M+SKC +LD + + F +EK
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEK 298
Query: 376 PDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQF 434
D++ ++I +Y++H E A++LF + VRP+ TF +L+ S + ++ +
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLS--SMNAVMLDHGAD 356
Query: 435 LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ S+ +K G D ++ +Y + G + A+ + + D + W T++ G
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGK-DLIFWNTVIMG 410
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 234/479 (48%), Gaps = 39/479 (8%)
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVS-IETTLS-NMYIKCGWLDG 163
+K SSS+ + S EL K +H+ LI +G + + + TLS + G +D
Sbjct: 2 LKSSSSLVAKSILRHQCKSMSELYK-IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDY 60
Query: 164 AEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
A +K++ ++ G++ + ++ ++ +M++ G+ D + ++K+ +
Sbjct: 61 AYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSR 120
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLV------------------------------ 253
L + G +H VK GLE ++ + L+
Sbjct: 121 LSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSI 180
Query: 254 -DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI-RSKGVILN 311
D Y+K G +A F+ + E + +WS++I GY + G ++KALE F + R N
Sbjct: 181 LDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 240
Query: 312 SFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFL 371
++ AC+ + L G VH + L + ++++I MY+KCG + A+ F
Sbjct: 241 EVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFY 300
Query: 372 --TIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
++++ D + W AII A HG E+++LFHKM S + P+ +TF+ LL ACSH GLV
Sbjct: 301 RASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLV 360
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
KE F S+ + G +P +HY CM+ V SRAGL+++A + I MP +P LL
Sbjct: 361 KEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLN 419
Query: 489 GCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
GC +H NLE A K+ L P + YV + N++A+ + A R+ M ++ ++K
Sbjct: 420 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKK 478
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 4/279 (1%)
Query: 22 MLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATI 81
M G+ D M + N N IL Y +A VFDEM +RD+ +W+++
Sbjct: 152 MYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSM 211
Query: 82 ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSI-FCTLLGSFADPSALELGKQLHSQLIRIG 140
I Y + G A+ +F +M+ +G ++ + +++ + A AL GK +H ++ +
Sbjct: 212 IDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH 271
Query: 141 FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK--NAVACTGLMVGYTQALRHTDALLL 198
V ++T+L +MY KCG + A + + K +A+ ++ G ++L L
Sbjct: 272 LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQL 331
Query: 199 FAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSK 258
F KM + + DE F +L AC+ + + G E + +VD S+
Sbjct: 332 FHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSR 391
Query: 259 CGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKA 296
G + A + +P A++ G G + A
Sbjct: 392 AGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 247/544 (45%), Gaps = 53/544 (9%)
Query: 9 DPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFD 68
D ++ H+ LG + + + +R+ + N ++ Y K + AE +F
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVD--SRKNVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 69 EMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALEL 128
EM +R++ SW T+I YA+ G + A+ LF M + I +S+ L+ A+ L
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNL 193
Query: 129 GKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQ 188
+++ + DV T + + K G +D A + M +N ++ ++ GY Q
Sbjct: 194 FERMPRR--------DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQ 245
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
R +A LF M E + +
Sbjct: 246 NNRIDEADQLFQVMP---------------------------------------ERDFAS 266
Query: 249 GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF-KNIRSKG 307
++ + + AC F+ + E N SW+ +ITGY ++ ++AL F K +R
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY 367
V N Y +I ACS ++ LV G Q+H K + SA++ MYSK G+L A
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 368 QAFLT--IEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
+ F + + D I+W ++I YA+HG EA++++++M + G +P+AVT++ LL ACSH
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSH 446
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWK 484
+GLV++G +F + + +HY C++ + RAG L++ I +
Sbjct: 447 AGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 485 TLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERN 544
+L C H + A K+ D+ TYV M N++A G +EAA+ R M E+
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Query: 545 LRKE 548
L+K+
Sbjct: 567 LKKQ 570
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 26/275 (9%)
Query: 228 NTGRQIHSYSVKLGLESEVSVGTP--LVDFYSKCGRFEAACQAFESIREPNDFSWSAIIT 285
N R I+S S S V P L+ K G+ A + F+ + E + +W+ +IT
Sbjct: 32 NLVRSIYSSS------SRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVIT 85
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
GY + G +A E F + S+ N +T + L + + ++ +V
Sbjct: 86 GYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKML 404
+ + MI Y++ G++D A + F + + + ++W +++ A G+ EA+ LF +M
Sbjct: 143 W----NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL 464
R V V++ +++ + +G V E ++ D M + I +N MI Y++ +
Sbjct: 199 RRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPER-----NIISWNAMITGYAQNNRI 249
Query: 465 QEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETA 499
EA ++ + MP E D SW T++ G +R + A
Sbjct: 250 DEADQLFQVMP-ERDFASWNTMITGFIRNREMNKA 283
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 216/450 (48%), Gaps = 11/450 (2%)
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGF---TADVSIETTLSNMYIKCGWLDGA 164
PS+S L + +L+ KQ+H+Q+I IG T +S LS+ L
Sbjct: 4 PSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSIL 63
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG---VKLDEFVFSIVLKAC 221
N + ++ + H A L+ +++ V+ +EF + + KA
Sbjct: 64 RQIPNPSVFLYNTLISSIVSNHNSTQTHL-AFSLYDQILSSRSNFVRPNEFTYPSLFKAS 122
Query: 222 AALKDINT-GRQIHSYSVKL--GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
+ GR +H++ +K + + V LV FY+ CG+ A FE IREP+
Sbjct: 123 GFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLA 182
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
+W+ ++ Y S D E V N + ++C+ + + V G H
Sbjct: 183 TWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYV 242
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAV 397
+K L +++I +YSKCG L +A + F + + D + A+I A HG E +
Sbjct: 243 LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI 302
Query: 398 KLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGV 457
+L+ ++ G+ P++ TF+ ++ACSHSGLV EG Q +SM YG++P ++HY C++ +
Sbjct: 303 ELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDL 362
Query: 458 YSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATY 517
R+G L+EA E I+ MP +P+ W++ LG +H + E IA + L+ +S Y
Sbjct: 363 LGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNY 422
Query: 518 VTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
V + N++A W + + R++M + + K
Sbjct: 423 VLLSNIYAGVNRWTDVEKTRELMKDHRVNK 452
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 136/304 (44%), Gaps = 18/304 (5%)
Query: 12 SYKHLFKMCGMLGAL-SDGKLFHNRLQRM---ANGNKFIDNCILQMYCDCKSFTAAERVF 67
+Y LFK G G+ H + + N ++F+ ++ Y +C A +F
Sbjct: 114 TYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 68 DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
+ + + DL +W T+++AYA + + + + ++P+ L+ S A+
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFV 233
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV--- 184
G H +++ T + + T+L ++Y KCG L A ++M+ ++ V+C M+
Sbjct: 234 RGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRD-VSCYNAMIRGL 292
Query: 185 ---GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-HSYSVKL 240
G+ Q + + L+ +I +G+ D F + + AC+ ++ G QI +S
Sbjct: 293 AVHGFGQ-----EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVY 347
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKALET 299
G+E +V LVD + GR E A + + + +PN W + + G F++
Sbjct: 348 GIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIA 407
Query: 300 FKNI 303
K++
Sbjct: 408 LKHL 411
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 211/427 (49%), Gaps = 37/427 (8%)
Query: 158 CGWLDGAEVAT---NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
CG L ++ A + + N + ++ Y+ ++L F+ M G+ DE+ +
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
+ +LK+C++L D+ G+ +H ++ G + +V+ Y+ GR A + F+ + E
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI-LNSFVYT----------------- 316
N W+ +I G+C SG ++ L FK + + ++ NS + +
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 317 -------------NIFQACSAISDLVYGAQVHADAIKKGLVQ-YLSGESAMITMYSKCGK 362
+ +++ L G +H+ A GL + +++ +A++ Y K G
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 363 LDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSG-VRPNAVTFIGLLN 420
L+ A F +++ + ++W +I A +GK E + LF M+ G V PN TF+G+L
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDT 480
CS++G V+ G++ M ++ ++ +HY M+ + SR+G + EA + +++MP +
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 481 LSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMM 540
W +LL C SH +++ A +AA ++ ++P +S YV + NL+A G W + + R +M
Sbjct: 406 AMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLM 465
Query: 541 AERNLRK 547
+ LRK
Sbjct: 466 KKNRLRK 472
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 162/365 (44%), Gaps = 35/365 (9%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
A RVF + + ++ + +I Y+ G + ++ FS M GI + LL S +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGL 182
S L GK +H +LIR GF I + +Y G + A+ ++M+ +N V +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 183 MVGY-------------------------------TQALRHTDALLLFAKMIKEGVKLDE 211
+ G+ ++ R +AL LF +MI +G DE
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLESE-VSVGTPLVDFYSKCGRFEAACQAFE 270
VL A+L ++TG+ IHS + GL + ++VG LVDFY K G EAA F
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 271 SIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG-VILNSFVYTNIFQACSAISDLV 329
++ N SW+ +I+G +G+ + ++ F + +G V N + + CS +
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 330 YGAQVHADAIKKGLVQYLSGE-SAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICA 387
G ++ +++ ++ + AM+ + S+ G++ A++ + + W +++ A
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 388 YAYHG 392
HG
Sbjct: 415 CRSHG 419
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 133/326 (40%), Gaps = 37/326 (11%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRL----------------------QR 38
M I D +Y L K C L L GK H L R
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGR 152
Query: 39 MANGNKFID----------NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEE 88
M + K D N +++ +CD +F +M +R + SW ++IS+ ++
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC 212
Query: 89 GHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD-VSI 147
G A+ LF M+D G P + T+L A L+ GK +HS G D +++
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 148 ETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG- 206
L + Y K G L+ A KM +N V+ L+ G + + LF MI+EG
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK 332
Query: 207 VKLDEFVFSIVLKACAALKDINTGRQIHSYSV-KLGLESEVSVGTPLVDFYSKCGRFEAA 265
V +E F VL C+ + G ++ + + LE+ +VD S+ GR A
Sbjct: 333 VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA 392
Query: 266 CQAFESIR-EPNDFSWSAIITGYCQS 290
+ +++ N W ++++ C+S
Sbjct: 393 FKFLKNMPVNANAAMWGSLLSA-CRS 417
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 46/333 (13%)
Query: 252 LVDFYSKCGRF---EAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGV 308
L F S CG + A + F I+ PN ++A+I Y G ++L F +++S+G+
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 309 ILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQ 368
+ + Y + ++CS++SDL +G VH + I+ G + ++ +Y+ G++ A +
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 369 AFLTIEKPDTIAWTAIICAYAYHG--------------------------------KSEA 396
F + + + + W +I + G EA
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
++LF +M+ G P+ T + +L + G++ GK + I N ++
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 457 VYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHR------NLETASIAAGKIFHLD 510
Y ++G L+ A + R M + +SW TL+ G + +L A I GK+
Sbjct: 279 FYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKV---- 333
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
+ AT++ + + G + + +M ER
Sbjct: 334 APNEATFLGVLACCSYTGQVERGEELFGLMMER 366
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 173/298 (58%), Gaps = 5/298 (1%)
Query: 252 LVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRS-KGVIL 310
+++ K G A + + + N +W+ +I GY ++ ++++AL+ KN+ S +
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 311 NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
N F + + AC+ + DL + VH+ I G+ SA++ +Y+KCG + + + F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 371 LTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVK 429
++++ D W A+I +A HG +EA+++F +M V P+++TF+GLL CSH GL++
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
EGK++ MS ++ + P ++HY M+ + RAG ++EA E+I SMP EPD + W++LL
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 490 CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+++N E IA I +L S YV + N+++ W+ A + R++M++ +RK
Sbjct: 344 SRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 5/220 (2%)
Query: 172 TTKNAVACTGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALKDINTG 230
+ +N + ++ GY + +++ +AL M+ +K ++F F+ L ACA L D++
Sbjct: 125 SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 184
Query: 231 RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS-WSAIITGYCQ 289
+ +HS + G+E + + LVD Y+KCG + + F S++ ND S W+A+ITG+
Sbjct: 185 KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR-NDVSIWNAMITGFAT 243
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ-YLS 348
G +A+ F + ++ V +S + + CS L G + ++ +Q L
Sbjct: 244 HGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICA 387
AM+ + + G++ AY+ ++ +PD + W +++ +
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 6/261 (2%)
Query: 63 AERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDL-GIKPSSSIFCTLLGSFA 121
A++V D+++ +W +I Y A++ ML IKP+ F + L + A
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
L K +HS +I G + + + L ++Y KCG + + + +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY-SVKL 240
++ G+ T+A+ +F++M E V D F +L C+ + G++ S +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITG---YCQSGRFDKA 296
++ ++ +VD + GR + A + ES+ EP+ W ++++ Y + A
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356
Query: 297 LETFKNIRSKGVILNSFVYTN 317
++ +S +L S +Y++
Sbjct: 357 IQNLSKAKSGDYVLLSNIYSS 377
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 184/391 (47%), Gaps = 39/391 (9%)
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALK--DINTGRQIHSYSVKLGLESEVSVGTPLVDF 255
F +M + V D F V KACAA K D+ + +H +++ GL S++ L+
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 256 YSKCGRFEAACQAF----------------------ESIREPNDF---------SWSAII 284
YS ++A Q F E +R F SW+++I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLV 344
+GY Q +A++ F + + G+ ++ + AC+ D G +H +K L
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 345 QYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKM 403
+ ++ Y+KCG +D A + F W A+I A HG E V F KM
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 404 LRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL 463
+ SG++P+ VTFI +L CSHSGLV E + D M Y V+ + HY CM + RAGL
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 464 LQEALEMIRSMPFE----PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVT 519
++EA EMI MP + L+W LLGGC H N+E A AA ++ L P D Y
Sbjct: 402 IEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKV 461
Query: 520 MFNLHALAGNWDEAAQYRKMM-AERNLRKEV 549
M ++A A W+E + R+++ ++ ++K V
Sbjct: 462 MVEMYANAERWEEVVKVREIIDRDKKVKKNV 492
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 153/374 (40%), Gaps = 42/374 (11%)
Query: 63 AERVFDEMVDRDLFSWATIIS-AYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
A VF + + F + TII E + + R F M + P F + + A
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 122 DPSA--LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA----------EVAT- 168
L L K LH Q +R G +D+ TL +Y +D A +V T
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 169 --------------------NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVK 208
+ M ++ V+ L+ GY Q +A+ LF +M+ G+K
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA 268
D L ACA D G+ IH Y+ + L + + T LVDFY+KCG + A +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 269 FESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDL 328
FE + F+W+A+ITG G + ++ F+ + S G+ + + ++ CS S L
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH-SGL 365
Query: 329 VYGAQVHADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK-----PDTIAW 381
V A+ D ++ + + + M + + G ++ A + + K +AW
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 382 TAIICAYAYHGKSE 395
+ ++ HG E
Sbjct: 426 SGLLGGCRIHGNIE 439
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 244/529 (46%), Gaps = 40/529 (7%)
Query: 49 CILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKP 108
C+ Y C SF+ E D F W +I +++ A+ L ML+ G+
Sbjct: 68 CVFHEYHVC-SFSFGEV-------EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSV 119
Query: 109 SSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVAT 168
+L + + ++ G Q+H L + G +D+ ++ L +Y+KCG L +
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL--------------DEFVF 214
++M +++V+ ++ GY + A LF M E L D
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGL------------ESEVSVGTPLVDFYSKCGRF 262
+ L A KD+ + + VK G +V ++D Y+K G
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 299
Query: 263 EAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL-NSFVYTNIFQA 321
A F+ + + ++++++ GY Q+ +ALE F ++ + +L + + A
Sbjct: 300 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPA 359
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGE--SAMITMYSKCGKLDYAYQAFLTIEKPDTI 379
+ + L +H ++K YL G+ A+I MYSKCG + +A F IE
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQF--YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 417
Query: 380 AWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
W A+I A HG E A + ++ R ++P+ +TF+G+LNACSHSGLVKEG + M
Sbjct: 418 HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELM 477
Query: 439 SVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLET 498
K+ ++P + HY CM+ + SR+G ++ A +I MP EP+ + W+T L C H+ ET
Sbjct: 478 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFET 537
Query: 499 ASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+ A + + ++YV + N++A G W + + R MM ER + K
Sbjct: 538 GELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEK 586
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 206/478 (43%), Gaps = 64/478 (13%)
Query: 3 EACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFT 61
E +S+D S + K C LG + G H L++ + F+ NC++ +Y C
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG 173
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM-LDL---------------- 104
+ ++FD M RD S+ ++I Y + G ++ A LF M +++
Sbjct: 174 LSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT 233
Query: 105 --GIKPSSSIFC-----------TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTL 151
G+ +S +F +++ + +E K L + R DV T+
Sbjct: 234 SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPR----RDVVTWATM 289
Query: 152 SNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL-D 210
+ Y K G++ A+ ++M ++ VA +M GY Q H +AL +F+ M KE L D
Sbjct: 290 IDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPD 349
Query: 211 EFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFE 270
+ IVL A A L ++ +H Y V+ +G L+D YSKCG + A FE
Sbjct: 350 DTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFE 409
Query: 271 SIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVY 330
I + W+A+I G G + A + I + + + + ACS
Sbjct: 410 GIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS------- 462
Query: 331 GAQVHADAIKKGLVQY------------LSGESAMITMYSKCGKLDYAYQAFLTIE-KPD 377
H+ +K+GL+ + L M+ + S+ G ++ A + +P+
Sbjct: 463 ----HSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPN 518
Query: 378 TIAWTAIICAYAYHGKSEAVKLF--HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ 433
+ W + A ++H + E +L H +L++G P+ +++ L N + G+ K+ ++
Sbjct: 519 DVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS--SYVLLSNMYASFGMWKDVRR 574
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 24/286 (8%)
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGT-----------PLVDFYSKCGRFEAA 265
VL +C D+N QIH +K G+ ++ T P + +++C E
Sbjct: 18 VLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 74
Query: 266 CQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI 325
+F + F W+A+I + +AL + GV ++ F + + +ACS +
Sbjct: 75 VCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL 134
Query: 326 SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
+ G Q+H K GL L ++ +I +Y KCG L + Q F + K D++++ ++I
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 386 CAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLN--ACSHSGLVKEGKQFLDSMSVKYG 443
Y G + + ++ ++ N +++ +++ A + G+ K F D
Sbjct: 195 DGYVKCGLIVSARELFDLMPMEMK-NLISWNSMISGYAQTSDGVDIASKLFADM------ 247
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ + +N MI Y + G +++A + MP D ++W T++ G
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMIDG 292
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 249/523 (47%), Gaps = 47/523 (8%)
Query: 61 TAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSF 120
T +R+ D FSW ++ ++ + ++ M + GI PSS ++L +
Sbjct: 55 TYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRAC 114
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
+ GK +H+Q ++ G V ++T L +Y + G+++ A+ A + + KN V+
Sbjct: 115 GKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWN 174
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
L+ GY ++ +A +F K+ ++ D +++++ + A D+ + S +
Sbjct: 175 SLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFS---AM 227
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF 300
L+S S L+ Y C + A F+++ + N SW +I+GY + G A E F
Sbjct: 228 PLKSPASWNI-LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 301 KNIRSKGVIL---------------------------NSFV------YTNIFQACSAISD 327
+ + K ++ NS++ +++ A S + +
Sbjct: 287 RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGN 346
Query: 328 LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
+G V + + G+ +++I +Y K G A++ F + K DT++++A+I
Sbjct: 347 TSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMG 406
Query: 388 YAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
+G +EA LF M+ + PN VTF GLL+A SHSGLV+EG + +SM + ++P
Sbjct: 407 CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEP 465
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKI 506
+ DHY M+ + RAG L+EA E+I+SMP +P+ W LL H N+E IA
Sbjct: 466 SADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHC 525
Query: 507 FHL--DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
L DP +++ M +++ G WD+A R + E+ L K
Sbjct: 526 VKLETDPTGYLSHLAM--IYSSVGRWDDARTVRDSIKEKKLCK 566
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 11/380 (2%)
Query: 19 MCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSW 78
+ G+ L +L +A N N +L Y + A RVFD++ ++D SW
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSW 204
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
IIS+YA++G M A LFS M +K +S + L+G + + ++L + + +
Sbjct: 205 NLIISSYAKKGDMGNACSLFSAM---PLKSPAS-WNILIGGYVNCREMKLARTYFDAMPQ 260
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLL 198
VS T +S Y K G + AE M+ K+ + ++ YTQ + DAL L
Sbjct: 261 ---KNGVSWITMISG-YTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKL 316
Query: 199 FAKMIKEG--VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
FA+M++ ++ DE S V+ A + L + + G + SY + G++ + + T L+D Y
Sbjct: 317 FAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLY 376
Query: 257 SKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
K G F A + F ++ + + S+SA+I G +G +A F + K + N +T
Sbjct: 377 MKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFT 436
Query: 317 NIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-K 375
+ A S + G + L M+ M + G+L+ AY+ ++ +
Sbjct: 437 GLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQ 496
Query: 376 PDTIAWTAIICAYAYHGKSE 395
P+ W A++ A H E
Sbjct: 497 PNAGVWGALLLASGLHNNVE 516
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 189/360 (52%), Gaps = 8/360 (2%)
Query: 196 LLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL-ESEVSVGTPLVD 254
LL K +E + F ++ AC + G+QIH + VK G+ S+ V T ++
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 255 FYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFV 314
Y + A + F+ I +P+ W ++ GY + G + LE FK + +G+ + F
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESAMITMYSKCGKLDYAYQAFLTI 373
T AC+ + L G +H KK ++ + +A++ MY+KCG ++ A + F +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 374 EKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRS-GVRPNAVTFIGLLNACSHSGLVKEG 431
+ + +W A+I YA +G ++ A ++ R G++P++V +G+L AC+H G ++EG
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 432 KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCW 491
+ L++M +YG+ P +HY+C++ + RAG L +AL++I MP +P W LL GC
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 492 SHRNLETASIAAGKIFHLD----PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+H+N+E +A + L+ + A V + N++ EA + R M+ +R +RK
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 8/346 (2%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML---DLGIKPSSSIFC 114
K F A +FD + + F + T+I + +R F M+ + I PS F
Sbjct: 61 KHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFH 120
Query: 115 TLLGSFADPSALELGKQLHSQLIRIG-FTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
L+ + +GKQ+H +++ G F +D ++T + +Y++ L A +++
Sbjct: 121 FLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQ 180
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
+ V LM GY + ++ L +F +M+ G++ DEF + L ACA + + G+ I
Sbjct: 181 PDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWI 240
Query: 234 HSY-SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
H + K +ES+V VGT LVD Y+KCG E A + FE + N FSW+A+I GY G
Sbjct: 241 HEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGY 300
Query: 293 FDKALETFKNI-RSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD-AIKKGLVQYLSGE 350
KA I R G+ +S V + AC+ L G + + + G+
Sbjct: 301 AKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY 360
Query: 351 SAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
S ++ + + G+LD A + KP W A++ H E
Sbjct: 361 SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ +L++Y + K A +VFDE+ D+ W +++ Y G + +F ML G
Sbjct: 154 VQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG 213
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFT-ADVSIETTLSNMYIKCGWLDGA 164
I+P T L + A AL GK +H + + + +DV + T L +MY KCG ++ A
Sbjct: 214 IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETA 273
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAA 223
K+T +N + L+ GY A ++ +E G+K D V VL ACA
Sbjct: 274 VEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH 333
Query: 224 LKDINTGR-QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWS 281
+ GR + + + G+ + + +VD + GR + A E + +P W
Sbjct: 334 GGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWG 393
Query: 282 AIITGYCQSGR 292
A++ G C++ +
Sbjct: 394 ALLNG-CRTHK 403
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHN--RLQRMANGNKFIDNCILQMYCDCKSFTAA 63
I D S C +GAL+ GK H + +R + F+ ++ MY C A
Sbjct: 214 IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETA 273
Query: 64 ERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRM-LDLGIKPSSSIFCTLLGSFAD 122
VF+++ R++FSWA +I YA G+ A R+ + GIKP S + +L + A
Sbjct: 274 VEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH 333
Query: 123 PSALELGK-QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
LE G+ L + R G T + + ++ + G LD A KM K + G
Sbjct: 334 GGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWG 393
Query: 182 LMV 184
++
Sbjct: 394 ALL 396
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 189/360 (52%), Gaps = 8/360 (2%)
Query: 196 LLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL-ESEVSVGTPLVD 254
LL K +E + F ++ AC + G+QIH + VK G+ S+ V T ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 255 FYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFV 314
Y + A + F+ I +P+ W ++ GY + G + LE F+ + KG+ + F
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 315 YTNIFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESAMITMYSKCGKLDYAYQAFLTI 373
T AC+ + L G +H KK ++ + +A++ MY+KCG ++ A + F +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 374 EKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRS-GVRPNAVTFIGLLNACSHSGLVKEG 431
+ + +W A+I YA +G ++ A+ ++ R G++P++V +G+L AC+H G ++EG
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 432 KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCW 491
+ L++M +Y + P +HY+C++ + RAG L +AL +I MP +P W LL GC
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 492 SHRNLETASIAAGKIFHLD----PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+H+N+E +A + L+ + A V + N++ EA++ R M+ +R +RK
Sbjct: 401 THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 460
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 170/375 (45%), Gaps = 12/375 (3%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML---DLGIKPSSSIFC 114
K F A +FD + + F + T+I + +R F M+ + I PS F
Sbjct: 61 KHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFH 120
Query: 115 TLLGSFADPSALELGKQLHSQLIRIG-FTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
L+ + +GKQ+H +++ G F +D ++T + +Y++ L A +++
Sbjct: 121 FLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQ 180
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
+ V LM GY + ++ L +F +M+ +G++ DEF + L ACA + + G+ I
Sbjct: 181 PDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWI 240
Query: 234 HSYSVKLG-LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
H + K +ES+V VGT LVD Y+KCG E A + F+ + N FSW+A+I GY G
Sbjct: 241 HEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGY 300
Query: 293 FDKALETFKNI-RSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD-AIKKGLVQYLSGE 350
KA+ + + R G+ +S V + AC+ L G + + + +
Sbjct: 301 AKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY 360
Query: 351 SAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE----AVKLFHKMLR 405
S ++ + + G+LD A + KP W A++ H E AVK + +
Sbjct: 361 SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEK 420
Query: 406 SGVRPNAVTFIGLLN 420
V + L N
Sbjct: 421 GNVEEEEAALVQLSN 435
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 46 IDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+ +L++Y + K A +VFDE+ D+ W +++ Y G + +F ML G
Sbjct: 154 VQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKG 213
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFT-ADVSIETTLSNMYIKCGWLDGA 164
++P T L + A AL GK +H + + + +DV + T L +MY KCG ++ A
Sbjct: 214 LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETA 273
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAA 223
K+T +N + L+ GY A+ ++ +E G+K D V VL ACA
Sbjct: 274 VEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAH 333
Query: 224 LKDINTGRQ-IHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDFSWS 281
+ GR + + + + + + +VD + GR + A E + +P W
Sbjct: 334 GGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWG 393
Query: 282 AIITGYCQSGR 292
A++ G C++ +
Sbjct: 394 ALLNG-CRTHK 403
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 20 CGMLGALSDGKLFHNRLQRMA--NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFS 77
C +GAL+ GK H +++ + + F+ ++ MY C A VF ++ R++FS
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS 287
Query: 78 WATIISAYAEEGHMIGAIRLFSRM-LDLGIKPSSSIFCTLLGSFADPSALELGKQ-LHSQ 135
WA +I YA G+ A+ R+ + GIKP S + +L + A LE G+ L +
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 136 LIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
R T + + ++ + G LD A KM K + G ++
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 186/403 (46%), Gaps = 37/403 (9%)
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
L+ Y + +L LF M+ V+ + F ++KA + ++ G +H ++K G
Sbjct: 57 LIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRG 116
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREP-------------------------- 275
+ V T V FY + G E++ + F+ I P
Sbjct: 117 FLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQ 176
Query: 276 -----NDFSWSAIITGYCQSGRFDKALETFKNI--RSKGVIL-NSFVYTNIFQACSAISD 327
+ SW+ +I G+ + G KAL F + + VI N + ++ +C+
Sbjct: 177 RMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQ 236
Query: 328 --LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII 385
+ G Q+H + K ++ + +A++ MY K G L+ A F I AW AII
Sbjct: 237 GGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAII 296
Query: 386 CAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
A A +G+ +A+++F M S V PN +T + +L AC+ S LV G Q S+ +Y +
Sbjct: 297 SALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKI 356
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
PT +HY C++ + RAGLL +A I+S+PFEPD LLG C H N E +
Sbjct: 357 IPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGK 416
Query: 505 KIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
++ L P YV + +AL NW EA + RK M E +RK
Sbjct: 417 QLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 36/282 (12%)
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
+ T+I +Y G ++ LF+ ML ++P++ F +L+ + ++ G LH Q +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 138 RIGFTADVSIETTLSNMYIKCGWLDGAE-----------VATN----------------- 169
+ GF D ++T+ Y + G L+ + VA N
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 170 ---KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEG---VKLDEFVFSIVLKACAA 223
+M + V+ T ++ G+++ H AL++F +MI+ + +E F VL +CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 224 LKD--INTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWS 281
I G+QIH Y + + ++GT L+D Y K G E A F+ IR+ +W+
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 282 AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS 323
AII+ +GR +ALE F+ ++S V N I AC+
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 89/191 (46%), Gaps = 37/191 (19%)
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAI 339
++ +I Y +G + +L F ++ + V N+ + ++ +A + + YG +H A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 340 KKGLVQYLSGESAMITMYSKCGKL-------------------------------DYAYQ 368
K+G + +++ + Y + G L DYA++
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 369 AFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKML---RSGVRPNAVTFIGLLNACSH 424
F + D ++WT +I ++ G ++A+ +F +M+ R+ + PN TF+ +L++C++
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 425 --SGLVKEGKQ 433
G ++ GKQ
Sbjct: 234 FDQGGIRLGKQ 244
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 12/234 (5%)
Query: 9 DPRSYKHLFKMCGMLGAL-SDGKLFHNRLQR-MANGNKFIDNCILQMYCDCKSFTAAERV 66
DP + G +G L S K+F + L + N +D C D A
Sbjct: 120 DPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMD-----YAFEY 174
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD---LGIKPSSSIFCTLLGSFA-- 121
F M D+ SW T+I+ ++++G A+ +F M+ I P+ + F ++L S A
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
D + LGKQ+H ++ ++ T L +MY K G L+ A +++ K A
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
++ R AL +F M V + +L ACA K ++ G Q+ S
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 185/343 (53%), Gaps = 9/343 (2%)
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
++D S LKACA + Q+H + GL ++ + T L+D YSK G +A +
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 268 AFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD 327
F+ + + SW+A+I G R +A+E +K + ++G+ + ACS + D
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 328 LVYGAQV-HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAII 385
+ G + H + +V +A I MYSKCG +D AYQ F K + W +I
Sbjct: 226 VKEGENIFHGYSNDNVIVS-----NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 386 CAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
+A HG++ A+++F K+ +G++P+ V+++ L AC H+GLV+ G ++M+ K GV
Sbjct: 281 TGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GV 339
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAG 504
+ + HY C++ + SRAG L+EA ++I SM PD + W++LLG + ++E A IA+
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASR 399
Query: 505 KIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+I + + +V + N++A G W + + R M + ++K
Sbjct: 400 EIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKK 442
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 160/373 (42%), Gaps = 14/373 (3%)
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDL-----GIKPSSSIFCTL-LGSFADPSALELGKQ 131
W II +A H A + ML I ++ C+ L + A Q
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALR 191
LH Q+ R G +AD + TTL + Y K G L A ++M ++ + L+ G R
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-HSYSVKLGLESEVSVGT 250
++A+ L+ +M EG++ E L AC+ L D+ G I H YS V V
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSN 245
Query: 251 PLVDFYSKCGRFEAACQAFESIR-EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
+D YSKCG + A Q FE + + +W+ +ITG+ G +ALE F + G+
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
+ Y AC + YG V + KG+ + + ++ + S+ G+L A+
Sbjct: 306 PDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDI 365
Query: 370 FLTIEK-PDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
++ PD + W +++ A + E ++ + ++ N F+ L N + G
Sbjct: 366 ICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRW 425
Query: 429 KEGKQFLDSMSVK 441
K+ + D M K
Sbjct: 426 KDVGRVRDDMESK 438
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 8/251 (3%)
Query: 37 QRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIR 96
+R + + + +L Y +A ++FDEM RD+ SW +I+ A+
Sbjct: 137 RRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAME 196
Query: 97 LFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD-VSIETTLSNMY 155
L+ RM GI+ S LG+ + LG + I G++ D V + +MY
Sbjct: 197 LYKRMETEGIRRSEVTVVAALGACS-----HLGDVKEGENIFHGYSNDNVIVSNAAIDMY 251
Query: 156 IKCGWLDGAEVATNKMTTKNAVACTGLMV-GYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
KCG++D A + T K +V M+ G+ AL +F K+ G+K D+ +
Sbjct: 252 SKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSY 311
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
L AC + G + + G+E + +VD S+ GR A S+
Sbjct: 312 LAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSM 371
Query: 275 -PNDFSWSAII 284
P+ W +++
Sbjct: 372 IPDPVLWQSLL 382
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 236/512 (46%), Gaps = 40/512 (7%)
Query: 76 FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQ 135
W +I +Y ++ ++ RM+ GI+ + +++ + A G+ +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 136 LIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDA 195
+ ++ + L +MY + G +D A ++M+ ++AV+ ++ YT + +A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 196 LLLFAKMIKEGVKLDEFVFSIV-----------------------------------LKA 220
L +M GV+ ++ + LKA
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 221 CAALKDINTGRQIHSYSVK-LGLESEV-SVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
C+ + + G+ H ++ ++ +V L+ YS+C A F+ + +
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
+W++II+G+ + R ++ K + G N +I + + +L +G + H
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 339 IKK-GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-A 396
+++ L ++++ MY+K G++ A + F ++ K D + +T++I Y GK E A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
+ F M RSG++P+ VT + +L+ACSHS LV+EG M +G+ ++HY+CM+
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 457 VYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGK-IFHLDPLDSA 515
+Y RAG L +A ++ ++P+EP + TLL C H N AA K + P
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 516 TYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
Y+ + +++A+ G+W + + ++++ ++K
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 204/467 (43%), Gaps = 54/467 (11%)
Query: 68 DEMVDRDLF-SWATIISAYAEEGHMIGAIRLFSRML------DLGIKPSSSIFCTLLGSF 120
DE V + LF S+ IS G + A R FS + + + S+S+ T +G
Sbjct: 42 DESVPQVLFNSFRHCIS----HGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGF- 96
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
+ G+QLH+ I G D + L Y LD A+ T + +
Sbjct: 97 ---NEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWN 153
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
L+ Y + R +++ ++ +M+ +G++ DEF + V+KACAAL D GR +H
Sbjct: 154 VLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVS 213
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC------------ 288
+ V L+ Y + G+ + A + F+ + E + SW+AII Y
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 289 -----------------------QSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI 325
++G + AL +R+ V + S N +ACS I
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 326 SDLVYGAQVHADAIKKGLVQY--LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
L +G H I+ + + +++ITMYS+C L +A+ F +E W +
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 384 IICAYAYHGKSEAVK-LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY 442
II +AY+ +SE L +ML SG PN +T +L + G ++ GK+F + +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ +N ++ +Y+++G + A + SM + D +++ +L+ G
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 56/386 (14%)
Query: 211 EFVF---SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
EFV + +L C + G+Q+H++ + GLE + + LV FYS + A
Sbjct: 80 EFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQT 139
Query: 268 AFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD 327
E+ + W+ +I Y ++ RF +++ +K + SKG+ + F Y ++ +AC+A+ D
Sbjct: 140 ITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD 199
Query: 328 LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
YG VH L +A+I+MY + GK+D A + F + + D ++W AII
Sbjct: 200 FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINC 259
Query: 388 YAYHGK-SEAVKLFHKMLRSGVRPNAVT-------------FIGLLN------------- 420
Y K EA KL +M SGV + VT +IG LN
Sbjct: 260 YTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 421 ---------ACSHSGLVKEGKQF----LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
ACSH G +K GK F + S S + +D N +I +YSR L+ A
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV---RNSLITMYSRCSDLRHA 376
Query: 468 LEMIRSMPFEPDTLS-WKTLLGG-CWSHRNLETASIAAGKI---FHLDPLDSATYVTMFN 522
+ + + E ++LS W +++ G ++ R+ ET+ + + FH + + A+ + +F
Sbjct: 377 FIVFQQV--EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF- 433
Query: 523 LHALAGNWDEAAQYRKMMAERNLRKE 548
A GN ++ + R K+
Sbjct: 434 --ARVGNLQHGKEFHCYILRRQSYKD 457
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 184/435 (42%), Gaps = 51/435 (11%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAE 64
I D +Y + K C L + G++ H ++ ++ N ++ N ++ MY A
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 65 RVFDEMVDRD-----------------------------------LFSWATIISAYAEEG 89
R+FD M +RD + +W TI E G
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Query: 90 HMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR-IGFTADV-SI 147
+ IGA+ M + ++ S L + + AL+ GK H +IR F+ D+ ++
Sbjct: 300 NYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV 359
Query: 148 ETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGV 207
+L MY +C L A + ++ + ++ G+ R + L +M+ G
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKL-GLESEVSVGTPLVDFYSKCGRFEAAC 266
+ + +L A + ++ G++ H Y ++ + + + LVD Y+K G AA
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS 326
+ F+S+R+ + +++++I GY + G+ + AL FK++ G+ + + ACS S
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH-S 538
Query: 327 DLV------YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTI 379
+LV + H I+ L Y S M+ +Y + G LD A F TI +P +
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Query: 380 AWTAIICAYAYHGKS 394
++ A HG +
Sbjct: 595 MCATLLKACLIHGNT 609
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 236/512 (46%), Gaps = 40/512 (7%)
Query: 76 FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQ 135
W +I +Y ++ ++ RM+ GI+ + +++ + A G+ +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 136 LIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDA 195
+ ++ + L +MY + G +D A ++M+ ++AV+ ++ YT + +A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 196 LLLFAKMIKEGVKLDEFVFSIV-----------------------------------LKA 220
L +M GV+ ++ + LKA
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 221 CAALKDINTGRQIHSYSVK-LGLESEV-SVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
C+ + + G+ H ++ ++ +V L+ YS+C A F+ + +
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
+W++II+G+ + R ++ K + G N +I + + +L +G + H
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 339 IKK-GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-A 396
+++ L ++++ MY+K G++ A + F ++ K D + +T++I Y GK E A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
+ F M RSG++P+ VT + +L+ACSHS LV+EG M +G+ ++HY+CM+
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 457 VYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGK-IFHLDPLDSA 515
+Y RAG L +A ++ ++P+EP + TLL C H N AA K + P
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 516 TYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
Y+ + +++A+ G+W + + ++++ ++K
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 204/467 (43%), Gaps = 54/467 (11%)
Query: 68 DEMVDRDLF-SWATIISAYAEEGHMIGAIRLFSRML------DLGIKPSSSIFCTLLGSF 120
DE V + LF S+ IS G + A R FS + + + S+S+ T +G
Sbjct: 42 DESVPQVLFNSFRHCIS----HGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGF- 96
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACT 180
+ G+QLH+ I G D + L Y LD A+ T + +
Sbjct: 97 ---NEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWN 153
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
L+ Y + R +++ ++ +M+ +G++ DEF + V+KACAAL D GR +H
Sbjct: 154 VLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVS 213
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC------------ 288
+ V L+ Y + G+ + A + F+ + E + SW+AII Y
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 289 -----------------------QSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI 325
++G + AL +R+ V + S N +ACS I
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 326 SDLVYGAQVHADAIKKGLVQY--LSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTA 383
L +G H I+ + + +++ITMYS+C L +A+ F +E W +
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 384 IICAYAYHGKSEAVK-LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKY 442
II +AY+ +SE L +ML SG PN +T +L + G ++ GK+F + +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
+ +N ++ +Y+++G + A + SM + D +++ +L+ G
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 56/386 (14%)
Query: 211 EFVF---SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
EFV + +L C + G+Q+H++ + GLE + + LV FYS + A
Sbjct: 80 EFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQT 139
Query: 268 AFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD 327
E+ + W+ +I Y ++ RF +++ +K + SKG+ + F Y ++ +AC+A+ D
Sbjct: 140 ITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD 199
Query: 328 LVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
YG VH L +A+I+MY + GK+D A + F + + D ++W AII
Sbjct: 200 FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINC 259
Query: 388 YAYHGK-SEAVKLFHKMLRSGVRPNAVT-------------FIGLLN------------- 420
Y K EA KL +M SGV + VT +IG LN
Sbjct: 260 YTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 421 ---------ACSHSGLVKEGKQF----LDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
ACSH G +K GK F + S S + +D N +I +YSR L+ A
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV---RNSLITMYSRCSDLRHA 376
Query: 468 LEMIRSMPFEPDTLS-WKTLLGG-CWSHRNLETASIAAGKI---FHLDPLDSATYVTMFN 522
+ + + E ++LS W +++ G ++ R+ ET+ + + FH + + A+ + +F
Sbjct: 377 FIVFQQV--EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF- 433
Query: 523 LHALAGNWDEAAQYRKMMAERNLRKE 548
A GN ++ + R K+
Sbjct: 434 --ARVGNLQHGKEFHCYILRRQSYKD 457
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 184/435 (42%), Gaps = 51/435 (11%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANG-NKFIDNCILQMYCDCKSFTAAE 64
I D +Y + K C L + G++ H ++ ++ N ++ N ++ MY A
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 65 RVFDEMVDRD-----------------------------------LFSWATIISAYAEEG 89
R+FD M +RD + +W TI E G
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Query: 90 HMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR-IGFTADV-SI 147
+ IGA+ M + ++ S L + + AL+ GK H +IR F+ D+ ++
Sbjct: 300 NYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV 359
Query: 148 ETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGV 207
+L MY +C L A + ++ + ++ G+ R + L +M+ G
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKL-GLESEVSVGTPLVDFYSKCGRFEAAC 266
+ + +L A + ++ G++ H Y ++ + + + LVD Y+K G AA
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS 326
+ F+S+R+ + +++++I GY + G+ + AL FK++ G+ + + ACS S
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH-S 538
Query: 327 DLV------YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTI 379
+LV + H I+ L Y S M+ +Y + G LD A F TI +P +
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Query: 380 AWTAIICAYAYHGKS 394
++ A HG +
Sbjct: 595 MCATLLKACLIHGNT 609
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 34/384 (8%)
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQA 189
KQ+H+++I+ T D + L ++ G A + N++ + + ++ +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 190 LRHTDALLLFA-KMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
+ +ALLLF MI + D+F F V+KAC A I G Q+H ++K G ++V
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 249 GTPLVDFYSKCGRFEAACQAFESI-----------------------------REP--ND 277
L+D Y KCG+ ++ + F+ + + P N
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
SW+A+IT Y ++ R D+A + F+ ++ V N F N+ QA + + L G VH
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEA 396
A K G V +A+I MYSKCG L A + F ++ W ++I + HG EA
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 397 VKLF-HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMI 455
+ LF + V P+A+TF+G+L+AC+++G VK+G ++ M YG+ P +H CMI
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 456 GVYSRAGLLQEALEMIRSMPFEPD 479
+ +A +++A ++ SM +PD
Sbjct: 397 QLLEQALEVEKASNLVESMDSDPD 420
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 2/222 (0%)
Query: 62 AAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
+AE VF++M R++ SW +I+AY + A +LF RM +KP+ LL +
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG 181
+L +G+ +H + GF D + T L +MY KCG L A + M K+
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 182 LMVGYTQALRHTDALLLFAKMIKEG-VKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++ +AL LF +M +E V+ D F VL ACA ++ G + + +++
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 241 -GLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWS 281
G+ ++ + E A ES+ DF+ S
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNSS 424
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 13/227 (5%)
Query: 320 QACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTI 379
+ CS S L Q+H IK L +I++ S G+ YA F ++ P T
Sbjct: 28 RTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTF 84
Query: 380 AWTAIICAYAY-HGKSEAVKLFHKMLRS-GVRPNAVTFIGLLNACSHSGLVKEGKQFLDS 437
W +I + + H EA+ LF M+ S + + TF ++ AC S ++ G Q +
Sbjct: 85 TWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ-VHG 143
Query: 438 MSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLE 497
+++K G + N ++ +Y + G ++ MP +SW T+L G S+ L+
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR-SIVSWTTMLYGLVSNSQLD 202
Query: 498 TASIAAGKIFHLDPL-DSATYVTMFNLHALAGNWDEAAQ-YRKMMAE 542
+A I +F+ P+ + ++ M + DEA Q +R+M +
Sbjct: 203 SAEI----VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 184/378 (48%), Gaps = 27/378 (7%)
Query: 194 DALLLFAKMIKEG--VKLDEFVFSIVL---KACAALKDINTGRQIHSYSVKLGL--ESEV 246
D++ +FA + + L+E F VL A+ + GR +H KLG ESE+
Sbjct: 89 DSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESEL 148
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQ---SGRFD--KALETFK 301
+GT L+ FY+K G A + F+ + E +W+A+I GYC G + KA+ F+
Sbjct: 149 -IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 302 NIR--SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL---VQYLSGESAMITM 356
GV + A S L G+ VH K G V G +A++ M
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIG-TALVDM 266
Query: 357 YSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTF 415
YSKCG L+ A+ F ++ + WT++ A +G+ +E L ++M SG++PN +TF
Sbjct: 267 YSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITF 326
Query: 416 IGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP 475
LL+A H GLV+EG + SM ++GV P I+HY C++ + +AG +QEA + I +MP
Sbjct: 327 TSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
Query: 476 FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSA-------TYVTMFNLHALAG 528
+PD + ++L C + + ++ D YV + N+ A G
Sbjct: 387 IKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKG 446
Query: 529 NWDEAAQYRKMMAERNLR 546
W E + RK M ER ++
Sbjct: 447 KWVEVEKLRKEMKERRIK 464
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 126 LELGKQLHSQLIRIGFTADVS-IETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
L +G+ +H + ++GF + I TTL + Y K G L A ++M + +V ++
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 185 GYTQALRHTD--------ALLLFAKM--IKEGVKLDEFVFSIVLKACAALKDINTGRQIH 234
GY H D A++LF + GV+ + VL A + + G +H
Sbjct: 187 GYCS---HKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 235 SYSVKLGLESEVSV--GTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGR 292
Y KLG EV V GT LVD YSKCG A FE ++ N F+W+++ TG +GR
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKK-GLVQYLSGES 351
++ + G+ N +T++ A I + G ++ + G+ +
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 352 AMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKS 394
++ + K G++ AYQ L + KPD I ++ A + +G++
Sbjct: 364 CIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGET 407
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 12/254 (4%)
Query: 26 LSDGKLFHNRLQRMA--NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIIS 83
L G++ H ++++ ++ I +L Y A +VFDEM +R +W +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 84 AY---AEEGHMIG--AIRLFSRM--LDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
Y ++G+ A+ LF R G++P+ + +L + + LE+G +H +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 137 IRIGFT--ADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTD 194
++GFT DV I T L +MY KCG L+ A M KN T + G R +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI-HSYSVKLGLESEVSVGTPLV 253
L +M + G+K +E F+ +L A + + G ++ S + G+ + +V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 254 DFYSKCGRFEAACQ 267
D K GR + A Q
Sbjct: 367 DLLGKAGRIQEAYQ 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 24 GALSDGKLFHNRLQRMA---NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWAT 80
G L G L H ++++ + FI ++ MY C A VF+ M +++F+W +
Sbjct: 234 GLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTS 293
Query: 81 IISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL-IRI 139
+ + A G L +RM + GIKP+ F +LL ++ +E G +L + R
Sbjct: 294 MATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRF 353
Query: 140 GFTADVSIETTLSNMYIKCGWLDGA 164
G T + + ++ K G + A
Sbjct: 354 GVTPVIEHYGCIVDLLGKAGRIQEA 378
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 229/522 (43%), Gaps = 52/522 (9%)
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
+E + F + +I + G I A+ L+ + G+ + L +
Sbjct: 3 LEEHLSLGEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRV 62
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
LGK LHS+ I+ G +DV + ++L +MY KCG + A ++M +N ++ GY
Sbjct: 63 VLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGY 122
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE-SE 245
+ + DA+L + V + + ++K +I R++ ++ E
Sbjct: 123 ---MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFE---RMPFELKN 176
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWS------------------------ 281
V + ++ Y + E A + FE I E N F WS
Sbjct: 177 VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA 236
Query: 282 -------AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
+I GY Q+G D A++ F N++ +G ++ ++I AC+ L G +V
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 335 HADAIKKG--LVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG 392
H+ +G L Q++S +A+I MY+KCG L+ A F +I ++I A HG
Sbjct: 297 HSLINHRGIELNQFVS--NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHG 354
Query: 393 KS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY 451
K EA+++F M ++P+ +TFI +L AC H G + EG + M + V P + H+
Sbjct: 355 KGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHF 413
Query: 452 NCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIA------AGK 505
C+I + R+G L+EA +++ M +P+ LLG C H + E A AG
Sbjct: 414 GCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGS 473
Query: 506 IFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
I + ++ NL+A W A R M +R L K
Sbjct: 474 I--TNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEK 513
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 175/409 (42%), Gaps = 34/409 (8%)
Query: 29 GKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAE 87
GKL H+ + + + + ++ MY C +A +VFDEM +R++ +W +I Y
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 88 EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL----------- 136
G + A LF ++ + ++ + ++ + +E ++L ++
Sbjct: 125 NGDAVLASGLFE---EISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS 181
Query: 137 IRIG-------------FTADVS-----IETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
+ +G F D+ + + + + Y + G + A ++ ++ V
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
L+ GY Q DA+ F M EG + D S +L ACA ++ GR++HS
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALE 298
G+E V L+D Y+KCG E A FESI + +++I+ G+ +ALE
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 299 TFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
F + S + + + + AC L+ G ++ ++ + + + +I +
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLG 421
Query: 359 KCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSEAVKLFHKMLRS 406
+ GKL AY+ + KP+ A++ A H +E + K++ +
Sbjct: 422 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIET 470
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 180/378 (47%), Gaps = 39/378 (10%)
Query: 209 LDEFVFSIVLKACA--ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC 266
D F + +LKA + + G +H ++KLG ES V V T LV Y G A
Sbjct: 119 FDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAH 178
Query: 267 QAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI----------------- 309
+ F+ + E N +W+ +ITG G F+KAL + + ++ V+
Sbjct: 179 KVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKE 238
Query: 310 ---------------LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY-LSGESAM 353
N I A + DL VHA K+G V + +++
Sbjct: 239 AILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSL 298
Query: 354 ITMYSKCGKLDYAYQAFLTIE--KPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRP 410
I Y+KCG + A++ F+ I + + ++WT +I A+A HG EAV +F M R G++P
Sbjct: 299 IDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKP 358
Query: 411 NAVTFIGLLNACSHSGLVKEG-KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
N VT I +LNACSH GL +E +F ++M +Y + P + HY C++ + R G L+EA +
Sbjct: 359 NRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEK 418
Query: 470 MIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGN 529
+ +P E + W+ LLG C + + E A K+ L+ YV M N+ G
Sbjct: 419 IALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGR 478
Query: 530 WDEAAQYRKMMAERNLRK 547
+ +A ++RK M R + K
Sbjct: 479 FLDAQRFRKQMDVRGVAK 496
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 150/346 (43%), Gaps = 46/346 (13%)
Query: 138 RIGFTADVSIETTLSNMYIKCG-WLDGAEV------------------ATN--------- 169
++GF + V ++T L MY+ G +D +V TN
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 170 ---KMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIK-EGVKLDEFVFSIVLKACAALK 225
KM + V+ T ++ GY + + +A+LLF++M+ + +K +E +L A L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 226 DINTGRQIHSYSVKLG-LESEVSVGTPLVDFYSKCGRFEAACQAFESIR--EPNDFSWSA 282
D+ +H+Y K G + ++ V L+D Y+KCG ++A + F I N SW+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS----AISDLV--YGAQVHA 336
+I+ + G +A+ FK++ G+ N ++ ACS A + + + V+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
I + Y ++ M + G+L+ A + L I + + W ++ A + + +E
Sbjct: 391 YKITPDVKHY----GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAE 446
Query: 396 AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVK 441
+ + L R + ++ + N +G + ++F M V+
Sbjct: 447 LAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 26/272 (9%)
Query: 33 HNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMI 92
H M N N ++ + F A ++M +R + SW TII YA
Sbjct: 178 HKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPK 237
Query: 93 GAIRLFSRMLDL-GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTA-DVSIETT 150
AI LFSRM+ IKP+ +L + + L++ +H+ + + GF D+ + +
Sbjct: 238 EAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNS 297
Query: 151 LSNMYIKCGWLDGA-----EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE 205
L + Y KCG + A E+ + KN V+ T ++ + +A+ +F M +
Sbjct: 298 LIDAYAKCGCIQSAFKFFIEIPNGR---KNLVSWTTMISAFAIHGMGKEAVSMFKDMERL 354
Query: 206 GVKLDEFVFSIVLKACAA--------LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
G+K + VL AC+ L+ NT ++ Y + +V LVD
Sbjct: 355 GLKPNRVTMISVLNACSHGGLAEEEFLEFFNT--MVNEYKIT----PDVKHYGCLVDMLR 408
Query: 258 KCGRFEAACQ-AFESIREPNDFSWSAIITGYC 288
+ GR E A + A E E W ++ G C
Sbjct: 409 RKGRLEEAEKIALEIPIEEKAVVWRMLL-GAC 439
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 206/452 (45%), Gaps = 37/452 (8%)
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL 190
Q+H++LI G D S L + G D + + + + Y +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFG--DSSYTVSIYRSIGKLYCANPVFKAYLVSS 97
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
AL + +++ G D + F ++ +++G+ H ++K G + + V
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 251 PLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETF-----KNIRS 305
L+ Y+ CG + A + F I + + SW++II G ++G A + F KNI S
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 306 KGVILNSFVYTN--------------------------IFQACSAISDLVYGAQVHADAI 339
+++++++ N + AC + L G VHA I
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 340 KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEA-VK 398
+ L + ++A+I MY KC ++ A + F ++ + + W +I A+ HG+ E ++
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVY 458
LF M+ +RP+ VTF+G+L C+ +GLV +G+ + M ++ + P H CM +Y
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 459 SRAGLLQEALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSA 515
S AG +EA E ++++P E P++ W LL N A + DPL+
Sbjct: 398 SSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYK 457
Query: 516 TYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
Y + N++++ G W++ + R+M+ ER + +
Sbjct: 458 YYHLLMNIYSVTGRWEDVNRVREMVKERKIGR 489
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 145/355 (40%), Gaps = 36/355 (10%)
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
L+ + AY A+ + +L G P S F +L+ ++ GK H
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHG 142
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLD---------------------------GAEVA 167
Q I+ G + ++ +L +MY CG LD G +A
Sbjct: 143 QAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 168 TNK----MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
+K M KN ++ ++ Y A ++ LF +M++ G + +E ++L AC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAI 283
+ GR +H+ ++ L S V + T L+D Y KC A + F+S+ N +W+ +
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 284 ITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGL 343
I +C GR + LE F+ + + + + + + C+ + G ++ + +
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 344 VQYLSGES-AMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK 393
++ G M +YS G + A +A + P++ W ++ + + G
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 19/301 (6%)
Query: 1 MDEACISIDP--RSYKHLFKMCGMLGALSDGKLFHNRLQR-MANGNKFIDNCILQMYCDC 57
+ C + P S H++ CG L KLF +R + + N I +
Sbjct: 145 IKHGCDQVLPVQNSLMHMYTCCGALDLAK--KLFVEIPKRDIVSWNSIIAGMVRN----- 197
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
AA ++FDEM D+++ SW +ISAY + +I LF M+ G + + S LL
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV 177
+ + L+ G+ +H+ LIR + V I+T L +MY KC + A + ++ +N V
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
+++ + R L LF MI ++ DE F VL CA ++ G+ +S
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Query: 238 V-KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGR 292
V + ++ + + YS G E A +A +++ + P W+ +++ S R
Sbjct: 378 VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS----SSR 433
Query: 293 F 293
F
Sbjct: 434 F 434
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 215/488 (44%), Gaps = 92/488 (18%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMAN-GNKFIDNCILQMYCDCKSFTAAE 64
I D S+ + K G G L F ++++ + ++ N I+ MY +S +A
Sbjct: 102 IMPDAFSFPVVIKSAGRFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESAR 156
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
+VFD++ R W +IS Y + G+ A +LF M P +
Sbjct: 157 KVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM------PEN-------------- 196
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMV 184
DV T + + K L+ A ++M K+ V+ ++
Sbjct: 197 -------------------DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLS 237
Query: 185 GYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC----------------------- 221
GY Q DAL LF M++ GV+ +E + IV+ AC
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL 297
Query: 222 ------------AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF 269
A +DI + R+I + +LG + + ++ Y++ G +A Q F
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFN---ELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKG-VILNSFVYTNIFQACSAISDL 328
+++ + N SW+++I GY +G+ A+E F+++ G + ++ AC ++DL
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 329 VYGAQVHADAIKKGLVQYL-SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICA 387
G + D I+K ++ SG ++I MY++ G L A + F +++ D +++ + A
Sbjct: 415 ELGDCI-VDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTA 473
Query: 388 YAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
+A +G E + L KM G+ P+ VT+ +L AC+ +GL+KEG++ S+ +P
Sbjct: 474 FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NP 528
Query: 447 TIDHYNCM 454
DHY CM
Sbjct: 529 LADHYACM 536
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 203/431 (47%), Gaps = 30/431 (6%)
Query: 66 VFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
+FD + ++F ++ +++ +RL+ + GI P + F ++ SA
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVI-----KSA 116
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG 185
G + + ++GF D + + +MY+K ++ A ++++ + ++ G
Sbjct: 117 GRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 186 YTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
Y + +A LF M + D +++++ A +KD+ R+ Y ++ +S
Sbjct: 177 YWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARK---YFDRMPEKSV 229
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKAL--ET 299
VS ++ Y++ G E A + F + PN+ +W +I+ C S R D +L
Sbjct: 230 VS-WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA-C-SFRADPSLTRSL 286
Query: 300 FKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD-AIKKGLVQYLSGESAMITMYS 358
K I K V LN FV T + + D+ ++ + ++ LV + +AMI+ Y+
Sbjct: 287 VKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTW----NAMISGYT 342
Query: 359 KCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSG-VRPNAVTFI 416
+ G + A Q F T+ K + ++W ++I YA++G++ A++ F M+ G +P+ VT I
Sbjct: 343 RIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI 402
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF 476
+L+AC H ++ G +D + K + Y +I +Y+R G L EA + M
Sbjct: 403 SVLSACGHMADLELGDCIVDYIR-KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK- 460
Query: 477 EPDTLSWKTLL 487
E D +S+ TL
Sbjct: 461 ERDVVSYNTLF 471
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 143/353 (40%), Gaps = 77/353 (21%)
Query: 169 NKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
+ +T N + +++ D L L+ + + G+ D F F +V+K+
Sbjct: 64 DSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF---- 119
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC 288
G + KLG + V ++D Y K E+A + F+ I + W+ +I+GY
Sbjct: 120 -GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 289 QSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLS 348
+ G ++A + F + V+
Sbjct: 179 KWGNKEEACKLFDMMPENDVV--------------------------------------- 199
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSG 407
+ MIT ++K L+ A + F + + ++W A++ YA +G +E A++LF+ MLR G
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 408 VRPNAVTFIGLLNACS---HSGLVKEGKQFLDSMSVK----------------------- 441
VRPN T++ +++ACS L + + +D V+
Sbjct: 260 VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSAR 319
Query: 442 -----YGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG 489
G + +N MI Y+R G + A ++ +MP + + +SW +L+ G
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAG 371
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/566 (23%), Positives = 242/566 (42%), Gaps = 45/566 (7%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKL--FHNRLQRM-ANG---NKFIDNCILQMY 54
M + I I P +Y + K G S G L +N ++ M A+G N I +++ +
Sbjct: 408 MKKRNIVISPYTYGTVVK-----GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 55 CDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSS 110
F A RV EM ++ D+F + ++I ++ M A M++ G+KP++
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 111 SIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK 170
+ + + + S + ++ G + + T L N Y K G + A A
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 171 MTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKD 226
M + +A T LM G + + DA +F +M +G+ D F + +++ + L +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 227 INTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSA 282
+ I V+ GL V + L+ + + G E A + + + PN ++
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 283 IITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKG 342
II GYC+SG +A F ++ KG++ +SFVYT + C ++D+ + KKG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761
Query: 343 LVQYLSGESAMITMYSKCGKLDYAYQ--------AFLTIEKPDTIAWTAIICAYAYHGKS 394
+ +A+I K GK + + +F KP+ + + +I G
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 395 EAVK-LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
EA K LFH+M + + P +T+ LLN G E D ++ G++P Y+
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEPDHIMYSV 880
Query: 454 MIGVYSRAGLLQEALEMIRSMPFEPDTL---------SWKTLLGGCWSHRNLETASIAAG 504
+I + + G+ +AL ++ M F + + + + LL G +E A
Sbjct: 881 IINAFLKEGMTTKALVLVDQM-FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Query: 505 KIFHLDPL-DSATYVTMFNLHALAGN 529
+ L + DSAT + + N ++ N
Sbjct: 940 NMVRLQYIPDSATVIELINESCISSN 965
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 198/447 (44%), Gaps = 25/447 (5%)
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
+ II A+ + +M A L M + GI +I+ T++ + + + G + +L
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 138 RIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT---TKNAVACTGLMV-GYTQALRHT 193
GFT V L N+Y K G + A + M K+ + +M+ G+ +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+A +F M+KEG+K D +++ ++ A + +++ Q KL P++
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 254 DFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
Y+K G + + F+ +R P +++ +I G + + +KA+E + GV
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
N YT I Q +++ D + +GL + A++ K G++ Q+
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM----QS 712
Query: 370 FLTIEKP--------DTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLN 420
L + K ++ + +I +A G EA L +M + GV+P+ T+ ++
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 421 ACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL---EMIRSMPFE 477
ACS +G + Q ++ M GV P I Y +I ++RA L ++AL E +++M +
Sbjct: 773 ACSKAGDMNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 478 PDTLSWKTLLGGCWSHRNLETASIAAG 504
PD + LL S ++ A I +G
Sbjct: 832 PDKAVYHCLLTSLLSRASIAEAYIYSG 858
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/496 (19%), Positives = 204/496 (41%), Gaps = 45/496 (9%)
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
F+++ + ++ Y G M A F RM GI P+S I+ +L+ ++A
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA----- 355
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
+G+ + L + + IE +L + G G+
Sbjct: 356 -VGRDMDEALSCVRKMKEEGIEMSLVTYSVIVG-------------------------GF 389
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
++A A F + + L+ ++ ++ A ++ + + G+++ +
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKN 302
++ ++D Y+ + F+ ++E P ++ +I Y + G+ KALE +
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
++ +GV N Y+ + + D V D +K+G+ + + +I+ + G
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 363 LDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIG 417
+D A Q ++K P T + II YA G ++++F M R G P TF G
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE---MIRSM 474
L+N +++ + LD M++ GV Y ++ Y+ G +A E +++
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLA-GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 475 PFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEA 533
+ D +++ LL C +++A ++ + P +S Y + + A G+ EA
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 534 AQYRKMMAERNLRKEV 549
A + M + ++ ++
Sbjct: 749 ADLIQQMKKEGVKPDI 764
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/448 (19%), Positives = 174/448 (38%), Gaps = 84/448 (18%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
++ + K + A VF++MV D+ + IISA+ G+M AI+ M L
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+P++ F ++ +A + D+ + +M +CG +
Sbjct: 585 HRPTTRTFMPIIHGYAK-------------------SGDMRRSLEVFDMMRRCGCVPTVH 625
Query: 166 VATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
GL+ G + + A+ + +M GV +E ++ +++ A++
Sbjct: 626 T------------FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 226 DINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIIT 285
D + + GL+ ++ F++ A++
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDI-------------------------------FTYEALLK 702
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
C+SGR AL K + ++ + NSFVY + + D+ A + K+G+
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGKSE-AVKLF 400
+ ++ I+ SK G ++ A Q +E KP+ +T +I +A E A+ +
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 401 HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV-KYGVDP-------TIDHYN 452
+M G++P+ + LL + + E + M++ K V+ T H++
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWS 882
Query: 453 -CMIGVYSRAGLLQEALEMIRSMPFEPD 479
C+ + + G L E L+ F PD
Sbjct: 883 KCLCKIEASGGELTETLQKT----FPPD 906
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 6/221 (2%)
Query: 262 FEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA 321
++A AFE I +P+ + ++ Y + G +A ETF+ +R++G+ S +YT++ A
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353
Query: 322 CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK---LDYAYQAFLTIEKP-D 377
+ D+ ++G+ L S ++ +SK G DY + I K +
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 378 TIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
+ II A+ E A L +M G+ + +++ + K+G
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE 477
+ + G PT+ Y C+I +Y++ G + +ALE+ R M E
Sbjct: 474 RLK-ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 155/322 (48%), Gaps = 10/322 (3%)
Query: 100 RMLD-LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKC 158
R++D L + + I+ L A + +L +++ ++ L M++ C
Sbjct: 77 RLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSC 136
Query: 159 GWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKE----GVKLDEFVF 214
G LD ++M ++ + + +G + + DA LF M+K K+ ++
Sbjct: 137 GRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWIL 196
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGL--ESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
VLKACA ++D G+Q+H+ KLG E + + L+ FY + E A +
Sbjct: 197 GCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQL 256
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD-LVYG 331
N +W+A +T + G F + + F + + G+ N V++N+ +ACS +SD G
Sbjct: 257 SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSG 316
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIA-WTAIICAYAY 390
QVHA+AIK G +I MY K GK+ A + F + + +++ W A++ +Y
Sbjct: 317 QQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQ 376
Query: 391 HG-KSEAVKLFHKMLRSGVRPN 411
+G EA+KL ++M +G++ +
Sbjct: 377 NGIYIEAIKLLYQMKATGIKAH 398
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
N +L M+ C ++FD M RD SWA + E G A LF ML K
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 108 PSSSIFCTLLGSFADPSAL----ELGKQLHSQLIRIGF--TADVSIETTLSNMYIKCGWL 161
+ I +LG A+ ELGKQ+H+ ++GF D + +L Y + L
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 162 DGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
+ A + ++++ N VA + + + + F +M G+K + VFS VLKAC
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 222 AALKD-INTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS- 279
+ + D +G+Q+H+ ++KLG ES+ + L++ Y K G+ + A + F+S ++ S
Sbjct: 307 SWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGV 308
W+A++ Y Q+G + +A++ +++ G+
Sbjct: 367 WNAMVASYMQNGIYIEAIKLLYQMKATGI 395
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 126/288 (43%), Gaps = 11/288 (3%)
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF 269
+E ++S + K A D ++ + +K + ++ L+ + CGR + Q F
Sbjct: 87 NEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMF 146
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKA----LETFKNIRSKGVILNSFVYTNIFQACSAI 325
+ + + SW+ + G + G ++ A + K+ + + S++ + +AC+ I
Sbjct: 147 DRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMI 206
Query: 326 SDLVYGAQVHADAIKKGLVQ----YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAW 381
D G QVHA K G + YLSG ++I Y + L+ A + +T+AW
Sbjct: 207 RDFELGKQVHALCHKLGFIDEEDSYLSG--SLIRFYGEFRCLEDANLVLHQLSNANTVAW 264
Query: 382 TAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
A + G+ E ++ F +M G++ N F +L ACS Q + + ++
Sbjct: 265 AAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAI 324
Query: 441 KYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLG 488
K G + +I +Y + G +++A ++ +S E W ++
Sbjct: 325 KLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVA 372
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 16 LFKMCGMLGALSDGKLFH---NRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVD 72
+ K C M+ GK H ++L + + ++ +++ Y + + A V ++ +
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 73 RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS-ALELGKQ 131
+ +WA ++ EG IR F M + GIK + S+F +L + + S G+Q
Sbjct: 259 ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQ 318
Query: 132 LHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG-YTQAL 190
+H+ I++GF +D I L MY K G + AE + +V+C MV Y Q
Sbjct: 319 VHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Query: 191 RHTDALLLFAKMIKEGVK 208
+ +A+ L +M G+K
Sbjct: 379 IYIEAIKLLYQMKATGIK 396
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 228/507 (44%), Gaps = 42/507 (8%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
++ ++ T+I+ + + G M A LF M GI+P + TL+ + L +G +L
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----TTKNAVACTGLMVGYTQA 189
SQ + G DV + ++ ++Y+K G L A V +M + N V T L+ G Q
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
R +A ++ +++K G++ +S ++ ++ +G ++ +K+G +V +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 250 TPLVDFYSKCG------RFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
LVD SK G RF +SIR N ++++I G+C+ RFD+AL+ F+ +
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLG-QSIRL-NVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 304 RSKGVILNSFVYTNIFQA-------CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITM 356
G+ + +T + + C + + G Q+ + + ++ + +I +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-GLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 357 YSKCGKLDYAYQAFLTI----EKPDTIAWTAIICAY-AYHGKSEAVKLFHKMLRSGVRPN 411
KC +++ A + F + +PD + + +IC Y + EA ++F + + PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 412 AVTFIGLLNA-CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
VT L++ C ++ + +G + S+ + G P Y C++ +S++ ++ + ++
Sbjct: 642 TVTLTILIHVLCKNNDM--DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 471 IRSMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH------LDPLDSATYVTMF 521
M P +S+ ++ G ++ A+ IFH L P D Y +
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT----NIFHQAIDAKLLP-DVVAYAILI 754
Query: 522 NLHALAGNWDEAAQYRKMMAERNLRKE 548
+ G EAA + M ++ +
Sbjct: 755 RGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 121/263 (46%), Gaps = 14/263 (5%)
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
PN ++ +I G+C+ G D+A + FK + +G+ + Y+ + L G ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYA---YQAFLTIE-KPDTIAWTAIICAYAY 390
+ A+ KG+ + S+ I +Y K G L A Y+ L P+ + +T +I
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 391 HGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
G+ EA ++ ++L+ G+ P+ VT+ L++ G ++ G + M +K G P +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVV 462
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASIAAGK- 505
Y ++ S+ GL+ A+ M + + + +L+ G W N ++ +
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG-WCRLNRFDEALKVFRL 521
Query: 506 --IFHLDPLDSATYVTMFNLHAL 526
I+ + P D AT+ T+ + +
Sbjct: 522 MGIYGIKP-DVATFTTVMRVSIM 543
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 30 KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATI-----ISA 84
K F+N ++ + N ++ YC + AER+F E++ F T+ I
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHV 651
Query: 85 YAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD 144
+ M GAIR+FS M + G KP++ + L+ F+ +E +L ++ G +
Sbjct: 652 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 711
Query: 145 VSIETTLSNMYIKCGWLDGA----EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA 200
+ + + + K G +D A A + + VA L+ GY + R +A LL+
Sbjct: 712 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 771
Query: 201 KMIKEGVKLDEFV 213
M++ GVK D+ +
Sbjct: 772 HMLRNGVKPDDLL 784
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 145/361 (40%), Gaps = 28/361 (7%)
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL---ESEVS------VGTPLVDFYSKC 259
LD V +++ C ++ +I YS +LG+ + V +G+ VD +
Sbjct: 144 LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD- 202
Query: 260 GRFEAACQAFESIREPNDFSWSAIITG--YCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
F+ C+ EP+ S + +C+ G KAL+ + + +G +
Sbjct: 203 -HFDKLCRGG---IEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNK 257
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK-- 375
+ + S + + +++ + + G + +I + K G++D A+ F +E+
Sbjct: 258 VLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316
Query: 376 --PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
PD IA++ +I Y G KLF + L GV+ + V F ++ SG +
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWKTLLGG 489
M + G+ P + Y +I + G + EA M I EP +++ +L+ G
Sbjct: 377 VVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 490 CWSHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
NL + + + P D Y + + + G A ++ M +++R
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 549 V 549
V
Sbjct: 496 V 496
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 202/431 (46%), Gaps = 19/431 (4%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL-GSFADPSALELGKQL 132
D+ + +++++ Y + A+ L +M+++G KP + F TL+ G F A E L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE-AVAL 210
Query: 133 HSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----TTKNAVACTGLMVGYTQ 188
Q+++ G D+ T+ N K G +D A KM + V ++ G +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 189 ALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSV 248
DAL LF +M +G++ D F +S ++ + ++ S ++ + V
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 249 GTPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIITGYCQSGRFDKALETFKNIR 304
+ L+D + K G+ A + ++ + +P+ F++S++I G+C R D+A F+ +
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 305 SKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
SK N Y+ + + + G ++ + ++GLV + +I + + D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 365 YAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLL 419
A F + P+ + + ++ +GK ++A+ +F + RS + P+ T+ ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE-- 477
+G V++G + ++S+K GV P + YN MI + R G +EA +++ M +
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 478 -PDTLSWKTLL 487
P++ ++ TL+
Sbjct: 570 LPNSGTYNTLI 580
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 179/421 (42%), Gaps = 51/421 (12%)
Query: 36 LQRMANG----NKFIDNCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAE 87
L++M G + I N I+ C K A +F EM ++ D+F+++++IS
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 88 EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSI 147
G A RL S M++ I P+ F L+ +F L ++L+ ++I+ D+
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 148 ETTLSNMYIKCGWLDGA----EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI 203
++L N + LD A E+ +K N V + L+ G+ +A R + + LF +M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 204 KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFE 263
+ G+ + ++ ++ +D + + + V +G+ + L+D K G+
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 264 AACQAFE----SIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIF 319
A FE S EP+ ++++ +I G C++G+ + E F N+ KGV N Y +
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 320 QA-CSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDT 378
C G++ AD++ K + + G L P++
Sbjct: 546 SGFCRK------GSKEEADSLLKKM--------------KEDGPL------------PNS 573
Query: 379 IAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
+ +I A G EA K +RS + IGL+ H G + K FLD +
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG--RLDKSFLDML 631
Query: 439 S 439
S
Sbjct: 632 S 632
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 191/447 (42%), Gaps = 21/447 (4%)
Query: 63 AERVFDEMVDRDLF----SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
A +F +MV F + ++SA A+ I L +M LGI + +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT----TK 174
F S L L + ++++++G+ D+ ++L N Y + A ++M
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 175 NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIH 234
+ T L+ G + ++A+ L +M++ G + D + V+ DI+ +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 235 SYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQS 290
K +E++V + ++D K + A F + P+ F++S++I+ C
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 291 GRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE 350
GR+ A ++ + + N ++ + A LV +++ + IK+ + +
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 351 SAMITMYSKCGKLDYAYQAF-LTIEK---PDTIAWTAIICAYAYHGK-SEAVKLFHKMLR 405
S++I + +LD A F L I K P+ + ++ +I + + E ++LF +M +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
G+ N VT+ L++ + + M V GV P I YN ++ + G L
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 466 EAL---EMIRSMPFEPDTLSWKTLLGG 489
+A+ E ++ EPD ++ ++ G
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 159/384 (41%), Gaps = 47/384 (12%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
MD I D +Y L G SD +L + ++R N N + ++ +
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
AE+++DEM+ R D+F+++++I+ + + A +F M+ P+ + T
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L+ F +E G +L ++ + G N
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVG-------------------------------N 432
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
V T L+ G+ QA +A ++F +M+ GV + ++I+L + +
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSG 291
Y + +E ++ +++ K G+ E + F ++ PN +++ +I+G+C+ G
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
++A K ++ G + NS Y + +A D + A+ IK+ +G++
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD----REASAELIKEMRSCGFAGDA 608
Query: 352 AMITMYSKC---GKLDYAYQAFLT 372
+ I + + G+LD ++ L+
Sbjct: 609 STIGLVTNMLHDGRLDKSFLDMLS 632
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/499 (19%), Positives = 212/499 (42%), Gaps = 49/499 (9%)
Query: 61 TAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSF 120
T +V ++ V D+ ++ T+ISAY+ +G M A L + M G P + T++
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAV--- 177
E K++ ++++R G + D + +L K G + E + M +++ V
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 178 AC-TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
C + +M +T++ AL+ F + + G+ D +++I+++ I+ + +
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGR 292
++ G +V ++ K A + F + E P+ ++ + +I G+C+ G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
A+E F+ ++ K + L+ Y + + D+ ++ AD + K ++
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL-------- 547
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPN 411
P I+++ ++ A G +EA +++ +M+ ++P
Sbjct: 548 -----------------------PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
+ ++ SG +G+ FL+ M + G P YN +I + R + +A ++
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKM-ISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 472 RSMPFE-----PDTLSWKTLLGGCWSHRNLETASIAAGKIFH--LDPLDSATYVTMFNLH 524
+ M E PD ++ ++L G ++ A + K+ ++P D +TY M N
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP-DRSTYTCMINGF 702
Query: 525 ALAGNWDEAAQYRKMMAER 543
N EA + M +R
Sbjct: 703 VSQDNLTEAFRIHDEMLQR 721
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 170/366 (46%), Gaps = 16/366 (4%)
Query: 198 LFAKMIKEGVKLDEFVFSIVLKA-CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
++ ++ + GV ++ + +I++ A C K G + K G+ ++ L+ Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK-GVYPDIVTYNTLISAY 280
Query: 257 SKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
S G E A + ++ P ++++ +I G C+ G++++A E F + G+ +S
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
Y ++ D+V +V +D + +V L S+M++++++ G LD A F +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 373 IEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
+++ PD + +T +I Y G S A+ L ++ML+ G + VT+ +L+ +
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWK 484
+ E + + M+ + + P +I + + G LQ A+E+ + M D +++
Sbjct: 461 LGEADKLFNEMTER-ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 485 TLLGGCWSHRNLETASIAAGKIFHLDPLDSA-TYVTMFNLHALAGNWDEAAQYRKMMAER 543
TLL G +++TA + + L + +Y + N G+ EA + M +
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 544 NLRKEV 549
N++ V
Sbjct: 580 NIKPTV 585
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 125/313 (39%), Gaps = 55/313 (17%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLF----SWATIISAYAEEGHMIGAIRLFSRMLD 103
N IL C K A+++F+EM +R LF + +I + + G++ A+ LF +M +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
I+ + TLL F ++ K++ + ++ + L N G L
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 164 AEVATNKMTTKN----AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
A ++M +KN + C ++ GY ++ +D KMI EG D
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD--------- 619
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----- 274
C +S T + F R E +AF +++
Sbjct: 620 -C------------------------ISYNTLIYGFV----REENMSKAFGLVKKMEEEQ 650
Query: 275 ----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVY 330
P+ F++++I+ G+C+ + +A + + +GV + YT + + +L
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 331 GAQVHADAIKKGL 343
++H + +++G
Sbjct: 711 AFRIHDEMLQRGF 723
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 100/234 (42%), Gaps = 11/234 (4%)
Query: 23 LGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLF----S 77
LG L + +LF ++ + N +L + A+ ++ +MV +++ S
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
++ +++A +GH+ A R++ M+ IKP+ I +++ + G+ ++I
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 138 RIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK------NAVACTGLMVGYTQALR 191
GF D TL +++ + A KM + + ++ G+ + +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 192 HTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE 245
+A ++ KMI+ GV D ++ ++ + ++ +IH ++ G +
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 174/441 (39%), Gaps = 50/441 (11%)
Query: 48 NCILQMYCDCKSFTAAERVFDEM-VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGI 106
N ++ YC A V D M V D+ ++ TI+ + + G + A+ + RML
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 107 KPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEV 166
P + L+ + S + +L ++ G T DV L N K G LD A
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 167 ATNKMTT----KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
N M + N + ++ R DA L A M+++G F+I
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI------ 349
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDF 278
L++F + G A E + + PN
Sbjct: 350 -----------------------------LINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
S++ ++ G+C+ + D+A+E + + S+G + Y + A + ++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGK- 393
KG L + +I +K GK A + + KPDTI +++++ + GK
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
EA+K FH+ R G+RPNAVTF ++ S FL M + G P Y
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTI 559
Query: 454 MIGVYSRAGLLQEALEMIRSM 474
+I + G+ +EALE++ +
Sbjct: 560 LIEGLAYEGMAKEALELLNEL 580
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 176/399 (44%), Gaps = 24/399 (6%)
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA----EVATNKMTTKNAVACTG 181
LE G + ++ G D+ TTL + + G A E+ + +
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
++ GY +A +AL + +M V D ++ +L++ + ++ ++
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKAL 297
+V T L++ + A + + +R+ P+ +++ ++ G C+ GR D+A+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
+ ++ S G N + I ++ + + ++ AD ++KG + + +I
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 358 SKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNA 412
+ G L A + + P+++++ ++ + K A++ +M+ G P+
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI- 471
VT+ +L A G V++ + L+ +S K G P + YN +I ++AG +A++++
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 472 --RSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH 508
R+ +PDT+++ +L+GG ++ A K FH
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAI----KFFH 508
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 135/315 (42%), Gaps = 33/315 (10%)
Query: 250 TPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETF----- 300
T L+ + + G+ A + E + P+ +++ +I+GYC++G + AL
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200
Query: 301 -KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSK 359
++ + IL S + + + D + + D I ++ + + + K
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 360 CGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGL 418
LD T PD + + ++ G+ EA+K + M SG +PN +T +
Sbjct: 261 L--LDEMRDRGCT---PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 419 LNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP--- 475
L + +G + ++ L M ++ G P++ +N +I R GLL A++++ MP
Sbjct: 316 LRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 476 FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPL-------DSATYVTMFNLHALAG 528
+P++LS+ LL G + ++ A I +L+ + D TY TM G
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRA------IEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 529 NWDEAAQYRKMMAER 543
++A + ++ +
Sbjct: 429 KVEDAVEILNQLSSK 443
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 218/492 (44%), Gaps = 27/492 (5%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFH------NRLQRMA-NGNKFIDNCILQMYCDCKSF 60
+ R +F+ +L A++ K F ++QR+ + N + N ++ +C
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 61 TAAERVFDEMV----DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTL 116
+ A + +M+ + + + +++++ Y + A+ L +M+++G +P + F TL
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 117 L-GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK- 174
+ G F A E L ++++ G ++ + N K G +D A NKM
Sbjct: 197 IHGLFLHNKASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 175 ---NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
N V + ++ + DAL LF +M +GV+ + +S ++ + +
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGY 287
++ S ++ + V L+D + K G+ A + ++ + +P+ F++S++I G+
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
C R D+A F+ + SK N Y + + G ++ + ++GLV
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGKSE-AVKLFHK 402
+ +I + + D A F + P+ + + ++ +GK E A+ +F
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 403 MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
+ RS + P T+ ++ +G V++G S+S+K GV P + YN MI + R G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKG 554
Query: 463 LLQEALEMIRSM 474
L +EA + R M
Sbjct: 555 LKEEADALFRKM 566
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 204/484 (42%), Gaps = 21/484 (4%)
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
+F + ++SA A+ I L +M LGI + + L+ F S + L L
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGYTQAL 190
+++++G+ + ++L N Y + A ++M + + T L+ G
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
+ ++A+ L +M++ G + + + +V+ DI+ + + +E+ V + +
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 251 PLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
++D K + A F + PN ++S++I+ C R+ A ++ +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
+ N + + A LV +++ + IK+ + + S++I + +LD A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 367 YQAF-LTIEK---PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
F L I K P+ + + +I + + E V+LF +M + G+ N VT+ L++
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL---EMIRSMPFEP 478
+ + M V GV P I YN ++ + G L++A+ E ++ EP
Sbjct: 445 FFQARDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 479 DTLSWKTLLGGCWSHRNLETA--SIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA-AQ 535
++ ++ G +E + + + P D Y TM + G +EA A
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-DVIIYNTMISGFCRKGLKEEADAL 562
Query: 536 YRKM 539
+RKM
Sbjct: 563 FRKM 566
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 156/371 (42%), Gaps = 14/371 (3%)
Query: 188 QALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVS 247
+++ DA+ LF M+K F F+ +L A A +K + + +LG+ +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNI 303
L++ + + + A + EP+ + S+++ GYC R A+ +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
G ++ +T + + + +++G L ++ K G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 364 DYAYQAFLTIE----KPDTIAWTAIICAY-AYHGKSEAVKLFHKMLRSGVRPNAVTFIGL 418
D A+ +E + + + ++ +I + Y + +A+ LF +M GVRPN +T+ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 419 LNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---P 475
++ + + + L M ++ ++P + +N +I + + G L EA ++ M
Sbjct: 302 ISCLCNYERWSDASRLLSDM-IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 476 FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDS-ATYVTMFNLHALAGNWDEAA 534
+PD ++ +L+ G H L+ A + D + TY T+ N A DE
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 535 QYRKMMAERNL 545
+ + M++R L
Sbjct: 421 ELFREMSQRGL 431
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 163/414 (39%), Gaps = 80/414 (19%)
Query: 94 AIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN 153
AI LF M+ PS F LL + A +L L ++ R+G + ++ L N
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 154 MYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
+ + + A KM + V + L+ GY R +DA+ L +M++ G +
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF 269
D F+ + IH L L ++ S LVD + G CQ
Sbjct: 189 DTITFTTL---------------IHG----LFLHNKASEAVALVDRMVQRG-----CQ-- 222
Query: 270 ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
PN ++ ++ G C+ G D A + + + N +Y+ + +
Sbjct: 223 -----PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS-------- 269
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAII 385
L +Y + A+ F +E +P+ I ++++I
Sbjct: 270 -------------LCKYRHEDDAL--------------NLFTEMENKGVRPNVITYSSLI 302
Query: 386 -CAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGV 444
C Y S+A +L M+ + PN VTF L++A G + E ++ D M +K +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM-IKRSI 361
Query: 445 DPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGG-CWSHR 494
DP I Y+ +I + L EA M M + P+ +++ TL+ G C + R
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 204/477 (42%), Gaps = 20/477 (4%)
Query: 29 GKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFS----WATIISA 84
+F++ L R F +++ +C +A + +M + T+I +
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 85 YAEEGHMIGAIRLFSRMLDLGIKPSSSIFC-TLLGSFADPSALELGKQLHSQLIRIGFTA 143
++ + A++L M +G P + F +LG E K ++ LIR GF
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAP 320
Query: 144 DVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMI 203
D L N K G +D A+ ++ V L+ G+ R DA + + M+
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 204 KE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRF 262
G+ D ++ ++ + ++ G + V T LVD + K G+
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 263 EAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNI 318
+ A + +PN ++ +I+ +C+ R +A+E F+ + KG + + + ++
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 319 FQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI----E 374
+ ++ + + D I +G+V + +I + + G++ A + +
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 375 KPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ 433
D I + ++I G+ +A LF KMLR G P+ ++ L+N SG+V+E +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 434 FLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLL 487
F M ++ G P I +N +I RAG +++ L M R + E PDT+++ TL+
Sbjct: 621 FQKEMVLR-GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 182/468 (38%), Gaps = 49/468 (10%)
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
G + S ++ L+G + +L Q+ G S+ ++ Y K G+
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGF--PG 163
Query: 165 EVATNKMTTKNAVACTGLMVGYTQALR-------HTDALLLFAKMIKEGVKLDEFVFSIV 217
+ + +N +C Y L H A +F M+ + F F +V
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 218 LKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR---- 273
+KA A+ +I++ + K G + L+ SKC R A Q E +
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 274 EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQ 333
P+ +++ +I G C+ R ++A + + +G + Y + I +
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 334 VHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK-----PDTIAWTAIICAY 388
+ K +V + + +I + G+LD A + PD + ++I Y
Sbjct: 344 LFYRIPKPEIVIF----NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 389 AYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPT 447
G A+++ H M G +PN ++ L++ G + E L+ MS G+ P
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPN 458
Query: 448 IDHYNCMIGVYSRAGLLQEALEMIRSMPF---EPDTLSWKTLLGG----------CWSHR 494
+NC+I + + + EA+E+ R MP +PD ++ +L+ G W R
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 495 NLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAE 542
++ + + A ++ TY T+ N G EA RK++ E
Sbjct: 519 DMISEGVVA---------NTVTYNTLINAFLRRGEIKEA---RKLVNE 554
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 158/392 (40%), Gaps = 41/392 (10%)
Query: 55 CDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIF 113
C AA+ +F + ++ + T+I + G + A + S M+ GI P +
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 114 CTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT 173
+L+ + + L ++ + G +V T L + + K G +D A N+M+
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 174 ----KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINT 229
N V L+ + + R +A+ +F +M ++G K D + F+ ++ + +I
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 230 GRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIIT 285
+ + G+ + L++ + + G + A + + ++ +++++I
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
G C++G DKA F+ + G A S IS + + GL +
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDG------------HAPSNIS---------CNILINGLCR 611
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKML 404
E A +++ + L PD + + ++I G+ E + +F K+
Sbjct: 612 SGMVEEA----------VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
G+ P+ VTF L++ G V + LD
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P+ S+S ++ GYC+ G DK + + ++ KG+ NS++Y +I I L +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAY 390
++ I++G++ + +I + K G + A + F + PD + +TAII +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 391 HGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
G EA KLFH+M G+ P++VTF L+N +G +K+ + + M ++ G P +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVV 457
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASIAAGKI 506
Y +I + G L A E++ M +P+ ++ +++ G N+E A G+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE- 516
Query: 507 FHLDPL--DSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
F L D+ TY T+ + + +G D+A + K M + L+ +
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 176/410 (42%), Gaps = 41/410 (10%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
D+ S++T+++ Y G + +L M G+KP+S I+ +++G L ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----TTKNAVACTGLMVGYTQA 189
S++IR G D + TTL + + K G + A +M T + + T ++ G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
+A LF +M +G++ D F+ ++ + ++H++ ++ G V
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 250 TPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
T L+D K G ++A + + +PN F++++I+ G C+SG ++A++ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDY 365
G+ ++ YT + A ++ ++ + + KGL
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL---------------------- 557
Query: 366 AYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
+P + + ++ + HG E KL + ML G+ PNA TF L+
Sbjct: 558 ---------QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
+K M + GV P Y ++ + +A ++EA + + M
Sbjct: 609 RNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 211/497 (42%), Gaps = 36/497 (7%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK---PSSSIFC 114
K + + RVFD + G + A R+F +ML+ G+ S +++
Sbjct: 169 KDWGSDPRVFD-----------VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 115 TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE----VATNK 170
T L +A + + + +G +V+ + + + G + A + K
Sbjct: 218 TRLSKDCYKTATAI--IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 171 MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG 230
T + ++ + ++ GY + L M ++G+K + +++ ++ + +
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 231 RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITG 286
+ S ++ G+ + V T L+D + K G AA + F + P+ +++AII+G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
+CQ G +A + F + KG+ +S +T + + +VH I+ G
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFH 401
+ + +I K G LD A + + K P+ + +I+ G EAVKL
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 402 KMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
+ +G+ + VT+ L++A SG + + ++ L M K G+ PTI +N ++ +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLH 574
Query: 462 GLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH--LDPLDSAT 516
G+L++ +++ M P+ ++ +L+ NL+ A+ + + P D T
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP-DGKT 633
Query: 517 YVTMFNLHALAGNWDEA 533
Y + H A N EA
Sbjct: 634 YENLVKGHCKARNMKEA 650
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 141/333 (42%), Gaps = 12/333 (3%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDL----FSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
++ +C AA + F EM RD+ ++ IIS + + G M+ A +LF M G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
++P S F L+ + ++ ++H+ +I+ G + +V TTL + K G LD A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 166 VATNKM----TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
++M N ++ G ++ +A+ L + G+ D ++ ++ A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 222 AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPND 277
+++ ++I + GL+ + L++ + G E + + PN
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
++++++ YC A +K++ S+GV + Y N+ + ++ + +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
KG +S S +I + K K A + F
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/363 (17%), Positives = 148/363 (40%), Gaps = 25/363 (6%)
Query: 30 KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM----VDRDLFSWATIISAY 85
K F+ R + I+ +C A ++F EM ++ D ++ +I+ Y
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 86 AEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADV 145
+ GHM A R+ + M+ G P+ + TL+ L+ +L ++ +IG ++
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 146 SIETTLSNMYIKCGWLDGAEVATNKMT----TKNAVACTGLMVGYTQALRHTDALLLFAK 201
++ N K G ++ A + + V T LM Y ++ A + +
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR 261
M+ +G++ F++++ + G ++ ++ + G+ + LV Y
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 262 FEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
+AA ++ + P+ ++ ++ G+C++ +A F+ ++ KG ++ Y+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
+ + + +V ++G L+ + + +S D Y+ ++PD
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREG----LAADKEIFDFFS-----DTKYKG----KRPD 718
Query: 378 TIA 380
TI
Sbjct: 719 TIV 721
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P+ S+S ++ GYC+ G DK + + ++ KG+ NS++Y +I I L +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAY 390
++ I++G++ + +I + K G + A + F + PD + +TAII +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 391 HGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
G EA KLFH+M G+ P++VTF L+N +G +K+ + + M ++ G P +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVV 457
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASIAAGKI 506
Y +I + G L A E++ M +P+ ++ +++ G N+E A G+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE- 516
Query: 507 FHLDPL--DSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
F L D+ TY T+ + + +G D+A + K M + L+ +
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 176/410 (42%), Gaps = 41/410 (10%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
D+ S++T+++ Y G + +L M G+KP+S I+ +++G L ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----TTKNAVACTGLMVGYTQA 189
S++IR G D + TTL + + K G + A +M T + + T ++ G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
+A LF +M +G++ D F+ ++ + ++H++ ++ G V
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 250 TPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
T L+D K G ++A + + +PN F++++I+ G C+SG ++A++ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDY 365
G+ ++ YT + A ++ ++ + + KGL
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL---------------------- 557
Query: 366 AYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
+P + + ++ + HG E KL + ML G+ PNA TF L+
Sbjct: 558 ---------QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
+K M + GV P Y ++ + +A ++EA + + M
Sbjct: 609 RNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 211/497 (42%), Gaps = 36/497 (7%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK---PSSSIFC 114
K + + RVFD + G + A R+F +ML+ G+ S +++
Sbjct: 169 KDWGSDPRVFD-----------VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 115 TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE----VATNK 170
T L +A + + + +G +V+ + + + G + A + K
Sbjct: 218 TRLSKDCYKTATAI--IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 171 MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG 230
T + ++ + ++ GY + L M ++G+K + +++ ++ + +
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 231 RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITG 286
+ S ++ G+ + V T L+D + K G AA + F + P+ +++AII+G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQY 346
+CQ G +A + F + KG+ +S +T + + +VH I+ G
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 347 LSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFH 401
+ + +I K G LD A + + K P+ + +I+ G EAVKL
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 402 KMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRA 461
+ +G+ + VT+ L++A SG + + ++ L M K G+ PTI +N ++ +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLH 574
Query: 462 GLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH--LDPLDSAT 516
G+L++ +++ M P+ ++ +L+ NL+ A+ + + P D T
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP-DGKT 633
Query: 517 YVTMFNLHALAGNWDEA 533
Y + H A N EA
Sbjct: 634 YENLVKGHCKARNMKEA 650
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 141/333 (42%), Gaps = 12/333 (3%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDRDL----FSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
++ +C AA + F EM RD+ ++ IIS + + G M+ A +LF M G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
++P S F L+ + ++ ++H+ +I+ G + +V TTL + K G LD A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 166 VATNKM----TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
++M N ++ G ++ +A+ L + G+ D ++ ++ A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 222 AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPND 277
+++ ++I + GL+ + L++ + G E + + PN
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
++++++ YC A +K++ S+GV + Y N+ + ++ + +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF 370
KG +S S +I + K K A + F
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/363 (17%), Positives = 148/363 (40%), Gaps = 25/363 (6%)
Query: 30 KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM----VDRDLFSWATIISAY 85
K F+ R + I+ +C A ++F EM ++ D ++ +I+ Y
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 86 AEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADV 145
+ GHM A R+ + M+ G P+ + TL+ L+ +L ++ +IG ++
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 146 SIETTLSNMYIKCGWLDGAEVATNKMT----TKNAVACTGLMVGYTQALRHTDALLLFAK 201
++ N K G ++ A + + V T LM Y ++ A + +
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR 261
M+ +G++ F++++ + G ++ ++ + G+ + LV Y
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 262 FEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
+AA ++ + P+ ++ ++ G+C++ +A F+ ++ KG ++ Y+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD 377
+ + + +V ++G L+ + + +S D Y+ ++PD
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREG----LAADKEIFDFFS-----DTKYKG----KRPD 718
Query: 378 TIA 380
TI
Sbjct: 719 TIV 721
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 172/420 (40%), Gaps = 53/420 (12%)
Query: 54 YCDCKSFTAAERVFDEM------------------------VDR--DLF----------- 76
YC K +A +VF+EM +D DLF
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 77 --SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
++ +I + A+ L M + GIKP+ + L+ S E ++L
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGA----EVATNKMTTKNAVACTGLMVGYTQAL 190
Q++ G +V L N Y K G ++ A E+ ++ + N L+ GY ++
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
H A+ + KM++ V D ++ ++ + ++ ++ S GL + T
Sbjct: 443 VHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 251 PLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
++D K R E AC F+S+ + PN ++A+I GYC++G+ D+A + + SK
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
+ NS + + A L + +K GL +S ++ +I K G D+A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 367 YQAFLTI----EKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
Y F + KPD +T I Y G+ +A + KM +GV P+ T+ L+
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 203/474 (42%), Gaps = 42/474 (8%)
Query: 38 RMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIG 93
R + N N +++ YC + A V ++M++R D+ ++ ++I G+
Sbjct: 422 RKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 94 AIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN 153
A RL S M D G+ P + +++ S +E L L + G +V + T L +
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 154 MYIKCGWLDGAEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
Y K G +D A + KM +K N++ L+ G + +A LL KM+K G++
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSYS-----VKLGLESEVSVGTPLVDFYSKCGRFEA 264
+I++ LKD G H+YS + G + + T + Y + GR
Sbjct: 601 TVSTDTILIH--RLLKD---GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 265 ACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQ 320
A +RE P+ F++S++I GY G+ + A + K +R G + + ++ +
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 321 ACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIA 380
+ ++ YG Q KG L S M+ + L+ + +T P+ +
Sbjct: 716 ---HLLEMKYGKQ-------KGSEPELCAMSNMMEFDTVVELLEKMVEHSVT---PNAKS 762
Query: 381 WTAIICAYAYHGKSE-AVKLFHKMLRS-GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
+ +I G A K+F M R+ G+ P+ + F LL+ C E + +D M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 439 SVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGG 489
+ G P ++ +I + G + + +++ + D L+WK ++ G
Sbjct: 823 -ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 875
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/478 (20%), Positives = 194/478 (40%), Gaps = 82/478 (17%)
Query: 113 FCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT 172
+ TLL S A ++ KQ++ +++ ++ + N Y K G ++ A +K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 173 T----KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDIN 228
+ T L++GY Q A +F +M +G + +E ++ ++ + I+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYC 288
+D + K E F ++R +++ +I C
Sbjct: 306 EA----------------------MDLFVKMKDDEC----FPTVR-----TYTVLIKSLC 334
Query: 289 QSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLS 348
S R +AL K + G+ N YT + + + ++ ++KGL+ +
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 349 GESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGKSEAVKLFHKML 404
+A+I Y K G ++ A +E P+T + +I Y +A+ + +KML
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Query: 405 RSGVRPNAVTFIGLLNACSHSG-----------------------------------LVK 429
V P+ VT+ L++ SG V+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 430 EGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTL 486
E DS+ K GV+P + Y +I Y +AG + EA M+ M + P++L++ L
Sbjct: 515 EACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 487 LGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALA--GNWDEA-AQYRKMMA 541
+ G + L+ A++ K+ + + + T+ +H L G++D A +++++M++
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL-IHRLLKDGDFDHAYSRFQQMLS 630
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 214/484 (44%), Gaps = 72/484 (14%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
++ ++ T+I+ + + G M A LF M GI+P + TL+ + L +G +L
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----TTKNAVACTGLMVGYTQA 189
SQ + G DV + ++ ++Y+K G L A V +M + N V T L+ G Q
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
R +A ++ +++K G++ +S ++ ++ +G ++ +K+G +V +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 250 TPLVDFYSKCG------RFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNI 303
LVD SK G RF +SIR N ++++I G+C+ RFD+AL+ F+ +
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLG-QSIRL-NVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
G+ + +T + + +I +G + E A+
Sbjct: 523 GIYGIKPDVATFTTVMRV----------------SIMEGRL-----EEALFLF------- 554
Query: 364 DYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAV---TFIGLL 419
++ F +PD +A+ +I A+ H K ++LF M R+ + + I LL
Sbjct: 555 ---FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA---LEMIRSMPF 476
C +++ +F +++ ++ ++P I YN MI Y L EA E+++ PF
Sbjct: 612 FKCHR---IEDASKFFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 477 EPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQY 536
P+T++ L+ + +++ A + MF++ A G+ A Y
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGA------------------IRMFSIMAEKGSKPNAVTY 709
Query: 537 RKMM 540
+M
Sbjct: 710 GCLM 713
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 192/468 (41%), Gaps = 55/468 (11%)
Query: 94 AIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN 153
A RL S +LD G P+ FCTL+ F ++ L + + G D+ +TL +
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 154 MYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFV 213
Y K G L + H LF++ + +GVKLD V
Sbjct: 330 GYFKAGML---------------------------GMGHK----LFSQALHKGVKLDVVV 358
Query: 214 FSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI- 272
FS + D+ T ++ + G+ V T L+ + GR A + I
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 273 ---REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
EP+ ++S++I G+C+ G ++++ G + +Y + S ++
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAII 385
+ + + + + + +++I + + + D A + F + KPD +T ++
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 386 CAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNA-CSHSGLVKEGKQFLDSMSVKYG 443
G+ EA+ LF +M + G+ P+A+ + L++A C H G Q D M +
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI-GLQLFDLMQ-RNK 596
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETAS 500
+ I N +I + + +++A + ++ EPD +++ T++ G S R L+ A
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 501 IAAGKIFHL---DPLDSATYVTMFNLHALAGNWDEAAQYR--KMMAER 543
+IF L P T +H L N D R +MAE+
Sbjct: 657 ----RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 195/450 (43%), Gaps = 26/450 (5%)
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
V D+ +++ I Y + G + A ++ RML GI P+ + L+ +
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN---KMTTKNAVACTGLMV-GY 186
++ Q+++ G + ++L + + KCG L KM V G++V G
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
++ A+ KM+ + ++L+ VF+ ++ L + ++ G++ +V
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 247 SVGTPLVDFYSKCGRFEAAC----QAFESIREPNDFSWSAIITGYCQSGRFDKALETF-- 300
+ T ++ GR E A + F+ EP+ ++ +I +C+ + L+ F
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 301 --KNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYS 358
+N S + + + V +F+ C I D ++ + I+ + + + MI Y
Sbjct: 592 MQRNKISADIAVCNVVIHLLFK-CHRIED---ASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 359 KCGKLDYAYQAF----LTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAV 413
+LD A + F +T P+T+ T +I + + A+++F M G +PNAV
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 414 TFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRS 473
T+ L++ S S ++ + + M K G+ P+I Y+ +I + G + EA +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 474 ---MPFEPDTLSWKTLLGG-CWSHRNLETA 499
PD +++ L+ G C R +E A
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 30 KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFSWATI-----ISA 84
K F+N ++ + N ++ YC + AER+F E++ F T+ I
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHV 680
Query: 85 YAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD 144
+ M GAIR+FS M + G KP++ + L+ F+ +E +L ++ G +
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 145 VSIETTLSNMYIKCGWLDGA----EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA 200
+ + + + K G +D A A + + VA L+ GY + R +A LL+
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Query: 201 KMIKEGVKLDEFV 213
M++ GVK D+ +
Sbjct: 801 HMLRNGVKPDDLL 813
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 145/361 (40%), Gaps = 28/361 (7%)
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGL---ESEVS------VGTPLVDFYSKC 259
LD V +++ C ++ +I YS +LG+ + V +G+ VD +
Sbjct: 144 LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD- 202
Query: 260 GRFEAACQAFESIREPNDFSWSAIITG--YCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
F+ C+ EP+ S + +C+ G KAL+ + + +G +
Sbjct: 203 -HFDKLCRGG---IEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNK 257
Query: 318 IFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK-- 375
+ + S + + +++ + + G + +I + K G++D A+ F +E+
Sbjct: 258 VLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316
Query: 376 --PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
PD IA++ +I Y G KLF + L GV+ + V F ++ SG +
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWKTLLGG 489
M + G+ P + Y +I + G + EA M I EP +++ +L+ G
Sbjct: 377 VVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 490 CWSHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKE 548
NL + + + P D Y + + + G A ++ M +++R
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 549 V 549
V
Sbjct: 496 V 496
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Query: 286 GYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQ 345
+C+ G+ KAL T + S +++ + + C L VH
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKML 404
LS ++ MYS CG + A F + + + W II +A +G E A+ +F +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL 464
G P+ F G+ AC G V EG +SMS YG+ P+I+ Y ++ +Y+ G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 465 QEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDP 511
EALE + MP EP+ W+TL+ H NLE A + LDP
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 4/180 (2%)
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDF 278
K C + + + +H ++S L++ YS CG A FE + E N
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
+W II + ++G + A++ F + +G I + ++ IF AC + D+ G +H ++
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL-LHFES 380
Query: 339 IKK--GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPDTIAWTAIICAYAYHGKSE 395
+ + G+ + +++ MY+ G LD A + + +P+ W ++ HG E
Sbjct: 381 MSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLE 440
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 8 IDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDN-CILQMYCDCKSFTAAERV 66
+D L K+CG L + K H ++ + N +L+MY +C A V
Sbjct: 252 VDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASV 311
Query: 67 FDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIF------CTLLGSF 120
F++M +++L +W II +A+ G AI +FSR + G P +F C +LG
Sbjct: 312 FEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDV 371
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIE--TTLSNMYIKCGWLDGA 164
+ LH + + + SIE +L MY G+LD A
Sbjct: 372 DEG-------LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEA 410
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 208/510 (40%), Gaps = 69/510 (13%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAE 64
+S+ P L K G +S +F+ R N ++ M
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 65 RVFDEMVDR-----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
V+ EM + D +++ +IS+Y + G AIRLF M D ++P+ I+ TLLG
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVAC 179
+ +E L ++ R G + V
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTV-------------------------------YTY 306
Query: 180 TGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
T L+ G +A R +A + M+++G+ D + ++ + + + S +
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFS---E 363
Query: 240 LGL----ESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSG 291
+G+ + VS T + + F+ ++ P++F++S +I GYC++
Sbjct: 364 MGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH-ADAIKKGLVQYLSGE 350
R +KAL + + KG Y CS I+ L + A+ + K L +
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAY------CSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 351 SA-----MITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLF 400
S+ MI + KCGKL A F ++ PD A+ A++ G +EA L
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLL 537
Query: 401 HKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSR 460
KM +G R + + +LN + +G+ + + +++ G+ P YN ++G ++
Sbjct: 538 RKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK-HSGIKPDGVTYNTLLGCFAH 596
Query: 461 AGLLQEALEMIRSMP---FEPDTLSWKTLL 487
AG+ +EA M+R M FE D +++ ++L
Sbjct: 597 AGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 109/271 (40%), Gaps = 47/271 (17%)
Query: 67 FDEM----VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
FD+M V F+++ +I Y + + A+ L M + G P + +C+L+ +
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NAVA 178
E +L +L + + + KCG L A N+M + + A
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
LM G +A +A L KM + G + D I+S+++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRAD----------------------INSHNI 554
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFD 294
+++ +++ G A + FE+I+ +P+ +++ ++ + +G F+
Sbjct: 555 -------------ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 295 KALETFKNIRSKGVILNSFVYTNIFQACSAI 325
+A + ++ KG ++ Y++I A +
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSILDAVGNV 632
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/532 (21%), Positives = 214/532 (40%), Gaps = 33/532 (6%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
NC + C +++ +V + D ++ T+I EG + A+ L RM++ G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVA 167
P + +++ L L ++ ADV +T+ + + G +D A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 168 TNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
+M TK + V L+ G +A + D LL M+ + + F+++L
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFE-SIRE---PNDFS 279
+ +++ + G+ + L+D Y R A + +R P+ +
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAI 339
++++I GYC R D ++ F+NI +G++ N+ Y+ + Q + ++ + +
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 340 KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD----TIAWTAIICAYAYHGKSE 395
G++ + ++ GKL+ A + F ++K + +T II GK E
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 396 -AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCM 454
A LF + GV+PN +T+ +++ G + E L M + G P YN +
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-EDGNAPNDCTYNTL 549
Query: 455 IGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRN-------LETASIAAG 504
I + R G L + ++I M F D S K ++ S L S +
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQ 609
Query: 505 KIFHLD-----PLDSATYVTMFNLH----ALAGNWDEAAQYRKMMAERNLRK 547
+ L L S T+V MF + +L N EA R+LRK
Sbjct: 610 DLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRK 661
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 203/489 (41%), Gaps = 31/489 (6%)
Query: 11 RSYKHLFKMCGMLGALSDGK-------LFHNRLQRMANGNKFIDNCILQMYCDC----KS 59
R Y +F ++ L GK LF L R + N ++ YC KS
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 60 FTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGS 119
F ER+ + ++ L ++ T++ + G + A + M DLG P + F L
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 120 FADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----N 175
++ E ++ + G + + L N K G ++ AE + K N
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDI-NTGRQIH 234
V ++ GY + A + M K+G+K D ++ +++ L ++ N ++++
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 235 SYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQS 290
+K G+ V L+ Y + F+ + + + PN S+ +I C+
Sbjct: 449 KMKLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 291 GRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGE 350
+ +A +++ +GV +Y + C + + + + +KKG+ L
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 351 SAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGKSE-AVKLFHKMLR 405
+ +I S GKL A L I KPD + ++I Y + G + + L+ +M R
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQ 465
SG++P T+ L++ C+ KEG + + + + + P + YN ++ Y+ G ++
Sbjct: 628 SGIKPTLKTYHLLISLCT-----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 466 EALEMIRSM 474
+A + + M
Sbjct: 683 KAFNLQKQM 691
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 116/541 (21%), Positives = 219/541 (40%), Gaps = 36/541 (6%)
Query: 31 LFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMV-DR---DLFSWATIISAYA 86
+F N L+ +KF+ +Q +F+ M DR +F + +I
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC 225
Query: 87 EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD-- 144
+ M A +LF ML + PS + TL+ + + G S +R AD
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC-----KAGNPEKSFKVRERMKADHI 280
Query: 145 ----VSIETTLSNMYIKCGWLDGAEVATNKMT----TKNAVACTGLMVGYTQALRHTDAL 196
++ T L ++ K G ++ AE +M +A + L GY+ + AL
Sbjct: 281 EPSLITFNTLLKGLF-KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 197 LLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFY 256
++ + GVK++ + SI+L A I +I + GL + ++D Y
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 257 SKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
+ G A E++ +P+ +++ +I +C+ G + A + ++ KGV +
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
Y + + + + G + + +I K KL A
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 373 IE----KPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
+E P + +I GK E A + +ML+ G+ N VT+ L++ S +G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWK 484
+ E + L +S K G+ P + YN +I Y AG +Q + + M +P ++
Sbjct: 580 LSEAEDLLLEISRK-GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 485 TLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERN 544
L+ C + +E G++ L P D Y + + +A+ G+ ++A +K M E++
Sbjct: 639 LLISLC-TKEGIELTERLFGEM-SLKP-DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 545 L 545
+
Sbjct: 696 I 696
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 188/442 (42%), Gaps = 18/442 (4%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+L YC K + A + D+MV+ D ++ T+I A+ L RM+ G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+P+ + ++ ++L L +++ ADV I T+ + K +D A
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 166 VATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
+M TK N V + L+ R +DA L + MI++ + + F+ ++ A
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 222 AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PND 277
++H +K ++ ++ L++ + R + A Q FE + P+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
+++ +I G+C+S R + E F+ + +G++ ++ YT + Q D +V
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKP----DTIAWTAIICAYAYHGK 393
+ G+ + S ++ GKL+ A + F ++K D +T +I GK
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 394 -SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYN 452
+ LF + GV+PN VT+ +++ L++E L M + G P YN
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK-EDGPLPDSGTYN 504
Query: 453 CMIGVYSRAGLLQEALEMIRSM 474
+I + R G + E+IR M
Sbjct: 505 TLIRAHLRDGDKAASAELIREM 526
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/518 (20%), Positives = 216/518 (41%), Gaps = 53/518 (10%)
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS 134
+F + ++SA A+ I L +M LGI + + L+ F S + L L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 135 QLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGYTQAL 190
+++++G+ + ++L N Y + A ++M + + T L+ G
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGT 250
+ ++A+ L +M++ G + + + +V+ DI+ + + +E++V +
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 251 PLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSK 306
++D K + A F+ + PN ++S++I+ C GR+ A + ++ K
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 307 GVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
+ N + + A V ++H D IK+ + + +++I + +LD A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 367 YQAF-LTIEKP--------------------------------------DTIAWTAIICA 387
Q F + K DT+ +T +I
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 388 YAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
+ G + A K+F +M+ GV P+ +T+ LL+ ++G +++ + D M K +
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKL 428
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSMPF---EPDTLSWKTLLGGCWSHRNLETASIAA 503
I Y MI +AG + + ++ S+ +P+ +++ T++ G S R L+ A
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 504 GKIFHLDPL-DSATYVTMFNLHALAGNWDEAAQYRKMM 540
K+ PL DS TY T+ H G+ +A+ + M
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 123/307 (40%), Gaps = 40/307 (13%)
Query: 24 GALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR----DLFSW 78
G SD +L + +++ N N N ++ + F AE++ D+M+ R D+F++
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
++I+ + + A ++F M+ P + TL+ F +E G +L ++
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLL 198
G D TTL G D A+ +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQK-------------------------------V 382
Query: 199 FAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSK 258
F +M+ +GV D +SI+L + ++ Y K ++ ++ + T +++ K
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 259 CGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFV 314
G+ + F S+ +PN +++ +I+G C +A K ++ G + +S
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 315 YTNIFQA 321
Y + +A
Sbjct: 503 YNTLIRA 509
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P+ F ++ +++ + +FD + + ++ G+ N + Y NI C +Q+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY-NILINC-----FCRRSQI 61
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK- 393
S + + K KL Y +P + ++++ Y HGK
Sbjct: 62 ----------------SLALALLGKMMKLGY---------EPSIVTLSSLLNGYC-HGKR 95
Query: 394 -SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYN 452
S+AV L +M+ G RP+ +TF L++ E +D M V+ G P + Y
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYG 154
Query: 453 CMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETAS--IAAGKIF 507
++ + G + A ++ M E D + + T++ +R+++ A +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 508 HLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
+ P + TY ++ + G W +A+Q M E+ + +
Sbjct: 215 GIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 196/478 (41%), Gaps = 43/478 (8%)
Query: 12 SYKHLFKM--CGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDE 69
+YK L KM CG + G + +N L G+K NC L AE+ + E
Sbjct: 391 AYKLLKKMVKCGHMP----GYVVYNILIGSICGDKDSLNCDL--------LDLAEKAYSE 438
Query: 70 MVDRDLFSWATIISAYAE----EGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSA 125
M+ + +S++ G A + M+ G P +S + +L + S
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 126 LELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT----TKNAVACTG 181
+EL L ++ R G ADV T + + + K G ++ A N+M T N V T
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 182 LMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
L+ Y +A + + A LF M+ EG + +S ++ + QI + G
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI--FERMCG 616
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFK 301
S P VD Y K Q ++ PN ++ A++ G+C+S R ++A +
Sbjct: 617 -----SKDVPDVDMYFK--------QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 302 NIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCG 361
+ +G N VY + + L +V + + G L S++I Y K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 362 KLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFI 416
+ D A + + + P+ + +T +I GK+ EA KL M G +PN VT+
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 417 GLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
+++ G ++ + L+ M K GV P Y +I + G L A ++ M
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 196/495 (39%), Gaps = 70/495 (14%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
++ +++T++ + + R+ + M+ G PS IF +L+ ++ +L
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 134 SQLIRIGFTADVSIETTL------SNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYT 187
++++ G + L + C LD AE A ++M V + +T
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 188 QAL----RHTDALLLFAKMIKEGVKLDEFVFSIVLK-ACAALKDINTGRQIHSYSVKLGL 242
+ L ++ A + +MI +G D +S VL C A K + L
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK----------MELAFLL 505
Query: 243 ESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKN 302
E+ G + D Y+ ++ ++ +C++G ++A + F
Sbjct: 506 FEEMKRGGLVADVYT----------------------YTIMVDSFCKAGLIEQARKWFNE 543
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+R G N YT + A + Y ++ + +G + + SA+I + K G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 363 LDYAYQAFLTI----EKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGL 418
++ A Q F + + PD + Y SE RPN VT+ L
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFK-----QYDDNSE-------------RPNVVTYGAL 645
Query: 419 LNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE- 477
L+ S V+E ++ LD+MS++ G +P Y+ +I + G L EA E+ M
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 478 -PDTL-SWKTLLGGCWSHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEAA 534
P TL ++ +L+ + + + AS K+ + Y M + G DEA
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 535 QYRKMMAERNLRKEV 549
+ +MM E+ + V
Sbjct: 765 KLMQMMEEKGCQPNV 779
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 168/359 (46%), Gaps = 17/359 (4%)
Query: 190 LRHTDALL-LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESE-VS 247
L+ D ++ L KM G++ D + F+IV+ ++ I +KLG E + V+
Sbjct: 98 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157
Query: 248 VGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNI 303
+G+ LV+ + + R A + + E P+ +++AII C++ R + A + FK I
Sbjct: 158 IGS-LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 304 RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL 363
KG+ N YT + S A++ +D IKK + + SA++ + K GK+
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 364 DYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGL 418
A + F + + PD + ++++I H + EA ++F M+ G + V++ L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 419 LNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPF-- 476
+N + V++G + MS + V T+ YN +I + +AG + +A E M F
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTV-TYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 477 -EPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEA 533
PD ++ LLGG + LE A + + + LD TY T+ G +EA
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 164/373 (43%), Gaps = 13/373 (3%)
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
+ DL+++ +I+ + + A+ + +ML LG +P +L+ F + +
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA----EVATNKMTTKNAVACTGLMVGY 186
L +++ IG+ D+ + + K ++ A + K N V T L+ G
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ R +DA L + MIK+ + + +S +L A + +++ V++ ++ ++
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIREP----NDFSWSAIITGYCQSGRFDKALETFKN 302
+ L++ R + A Q F+ + + S++ +I G+C++ R + ++ F+
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+ +G++ N+ Y + Q D+ + + G+ + + ++ G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 363 LDYAYQAFLTIEKP----DTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIG 417
L+ A F ++K D + +T +I GK EA LF + G++P+ VT+
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 418 LLNACSHSGLVKE 430
+++ GL+ E
Sbjct: 476 MMSGLCTKGLLHE 488
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 181/426 (42%), Gaps = 19/426 (4%)
Query: 65 RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPS 124
R F +VD + ++SA + I L +M LGI+ F ++ F
Sbjct: 80 RPFPSIVD-----FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCF 134
Query: 125 ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT----TKNAVACT 180
+ L + +++++G+ D +L N + + + A +KM + VA
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKL 240
++ + R DA F ++ ++G++ + ++ ++ + ++ S +K
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKA 296
+ V + L+D + K G+ A + FE + +P+ ++S++I G C R D+A
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 297 LETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITM 356
+ F + SKG + + Y + + G ++ + ++GLV + +I
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 357 YSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPN 411
+ + G +D A + F ++ PD + ++ +G+ E A+ +F M + + +
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 412 AVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMI 471
VT+ ++ +G V+E S+S+K G+ P I Y M+ GLL E +
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 472 RSMPFE 477
M E
Sbjct: 494 TKMKQE 499
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 187/442 (42%), Gaps = 18/442 (4%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+L YC K + A + D+MV+ D ++ T+I A+ L RM+ G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+P+ + ++ +L L +++ ADV I T+ + K +D A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 166 VATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
+M TK N V + L+ R +DA L + MI++ + + F+ ++ A
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 222 AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PND 277
+++ +K ++ ++ LV+ + R + A Q FE + P+
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
+++ +I G+C+S R + E F+ + +G++ ++ YT + Q D +V
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKP----DTIAWTAIICAYAYHGK 393
+ G+ + S ++ GKL+ A + F ++K D +T +I GK
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 394 -SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYN 452
+ LF + GV+PN VT+ +++ L++E L M + G P YN
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK-EDGPLPNSGTYN 579
Query: 453 CMIGVYSRAGLLQEALEMIRSM 474
+I + R G + E+IR M
Sbjct: 580 TLIRAHLRDGDKAASAELIREM 601
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 184/456 (40%), Gaps = 16/456 (3%)
Query: 94 AIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSN 153
AI LF M+ PS F LL + A ++ L ++ R+ + L N
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 154 MYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKL 209
+ + + A KM + V + L+ GY R +DA+ L +M++ G +
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 210 DEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF 269
D F+ ++ + + V+ G + + +V+ K G + A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 270 ESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAI 325
+ E + ++ II C+ D AL FK + +KG+ N Y+++ +
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 326 SDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAW 381
+Q+ +D I+K + L +A+I + K GK A + + + K PD +
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 382 TAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
+++ + H + +A ++F M+ P+ VT+ L+ S V++G + MS
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 441 KYGVDPTIDHYNCMIGVYSRAGL--LQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLET 498
+ V T+ + + G++ Q+ + + S PD +++ LL G ++ LE
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 499 ASIAAGKIFHLD-PLDSATYVTMFNLHALAGNWDEA 533
A + + LD Y TM AG D+
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 131/330 (39%), Gaps = 40/330 (12%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M+ I + +Y L G SD +L + +++ N N N ++ +
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
F AE+++D+M+ R D+F++ ++++ + + A ++F M+ P + T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L+ F +E G +L ++ G D TTL G D A+
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK--------- 456
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
+F +M+ +GV D +SI+L + ++
Sbjct: 457 ----------------------VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSG 291
Y K ++ ++ + T +++ K G+ + F S+ +PN +++ +I+G C
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQA 321
+A K ++ G + NS Y + +A
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 375 KPDTIAWTAIICAYAYHGK--SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
+P + ++++ Y HGK S+AV L +M+ G RP+ +TF L++ E
Sbjct: 152 EPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGG 489
+D M V+ G P + Y ++ + G AL ++ M E D + + T++
Sbjct: 211 ALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 490 CWSHRNLETAS--IAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+R+++ A + + P + TY ++ + G W +A+Q M E+ +
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 548 EV 549
+
Sbjct: 329 NL 330
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 167/385 (43%), Gaps = 17/385 (4%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMV----DRDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N +++ YC AER+ EM+ + + S+ ++I A+R ML
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
+ P + TL+ +L Q + GF D L + + G LD
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 164 AEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
A ++ + + V+ L+ G + +A + +M+K G+K D + +SI++
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EP 275
+ + Q + G+ +V + ++D K R E + F+ + +P
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N ++ +I YC+SGR ALE ++++ KG+ NS YT++ + S IS + +
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYH 391
+ +GL + +A+I Y K G++ + P+ I +T +I YA
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 392 GK-SEAVKLFHKMLRSGVRPNAVTF 415
G +EA +L ++M G+ P+++T+
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITY 788
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/530 (19%), Positives = 211/530 (39%), Gaps = 59/530 (11%)
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
V D++ + T I+A+ + G + A++LFS+M + G+ P+ F T++ +
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NAVACTGLMVGY 186
+++ G + + L + + A +MT K N + L+ +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+A A+ + M+ +G+ L ++ ++K + ++ + +G
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIITGYCQSGRFDKALETFKN 302
T ++ F++A + + P + +I+G C+ G+ KALE +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+KG ++++ + L ++ + + +G V + +I+ K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 363 LDYAYQAFLTIE-------KPDTIAWTAIICA-YAYHGKSEAVKLFHKMLRSGVRPNAVT 414
LD +AF+ ++ KPD ++ +IC + + EA++ + R+G+ P+ T
Sbjct: 556 LD---EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 415 FIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
+ +++ C + +EG++F D M K V P YN +I Y R+G L ALE+ M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 475 P---FEPDTLSWKTLLGGCWSHRNLETASI---------AAGKIFHLDPL---------- 512
P++ ++ +L+ G +E A + +FH L
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 513 -----------------DSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
+ TY M +A GN EA++ M E+ +
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 217/519 (41%), Gaps = 40/519 (7%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSF 60
M+EA ++ + ++ + GM G + +F ++ I IL K
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL-----VKGL 340
Query: 61 TAAERVFD------EMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSS 110
T A+R+ D EM + ++ + +I ++ E G + AI + M+ G+ +S
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 111 SIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK 170
S + TL+ + + ++L +++ IGF + T++ + D A +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 171 MTTKNAVACTGLMVGYTQAL----RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKD 226
M +N GL+ L +H+ AL L+ + + +G +D + +L
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 227 INTGRQIHSYSVKLG-LESEVSVGTPLVDFYSKCGRFEAACQAFESIRE-------PNDF 278
++ +I + G + VS T S C + +AF + E P+++
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNT----LISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
++S +I G + ++A++ + + + G++ + + Y+ + C G + +
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGKS 394
+ K + + +I Y + G+L A + ++ P++ +T++I + +
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 395 EAVKL-FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
E KL F +M G+ PN + L++ G + + + L M K V P Y
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVHPNKITYTV 755
Query: 454 MIGVYSRAGLLQEA---LEMIRSMPFEPDTLSWKTLLGG 489
MIG Y+R G + EA L +R PD++++K + G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 161/403 (39%), Gaps = 43/403 (10%)
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA 220
LD V NK + C L+ +A F + K GV D ++F+ + A
Sbjct: 211 LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINA 269
Query: 221 CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC----QAFESIREPN 276
+ ++ S + G+ V ++D CGR++ A + E EP
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
++S ++ G ++ R A K + KG N VY N+ + L ++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYA---YQAFLTIE-KPDTIAWTAIICAYAYHG 392
+ KGL S + +I Y K G+ D A + L+I + ++T++IC H
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 393 K-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK---------QFLDSMSVKY 442
A++ +ML + P L+ SGL K GK QFL+ V
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLI-----SGLCKHGKHSKALELWFQFLNKGFV-- 502
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEP---DTLSWKTLLGGCWSHRNLETA 499
VD N ++ AG L EA + + + D +S+ TL+ GC + L+ A
Sbjct: 503 -VDTRTS--NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 500 SIAAGKIFH--LDPLDSATYVT----MFNLHALAGNWDEAAQY 536
+ ++ L P D+ TY +FN++ + +EA Q+
Sbjct: 560 FMFLDEMVKRGLKP-DNYTYSILICGLFNMNKV----EEAIQF 597
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 341 KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK---PDTIAWTAIICAYAYHGK-SEA 396
KG+ + + ++T + + +AF + K PD +T I A+ GK EA
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
VKLF KM +GV PN VTF +++ G E F + M V+ G++PT+ Y+ ++
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM-VERGMEPTLITYSILVK 338
Query: 457 VYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETA-SIAAGKIFHLDPL 512
+RA + +A +++ M F P+ + + L+ +L A I + L
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 513 DSATYVTMFNLHALAGNWDEAAQYRKMM 540
S+TY T+ + G D A + K M
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEM 426
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 167/385 (43%), Gaps = 17/385 (4%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMV----DRDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N +++ YC AER+ EM+ + + S+ ++I A+R ML
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
+ P + TL+ +L Q + GF D L + + G LD
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 164 AEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
A ++ + + V+ L+ G + +A + +M+K G+K D + +SI++
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EP 275
+ + Q + G+ +V + ++D K R E + F+ + +P
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N ++ +I YC+SGR ALE ++++ KG+ NS YT++ + S IS + +
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYH 391
+ +GL + +A+I Y K G++ + P+ I +T +I YA
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 392 GK-SEAVKLFHKMLRSGVRPNAVTF 415
G +EA +L ++M G+ P+++T+
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITY 788
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/530 (19%), Positives = 211/530 (39%), Gaps = 59/530 (11%)
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
V D++ + T I+A+ + G + A++LFS+M + G+ P+ F T++ +
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NAVACTGLMVGY 186
+++ G + + L + + A +MT K N + L+ +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+A A+ + M+ +G+ L ++ ++K + ++ + +G
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIITGYCQSGRFDKALETFKN 302
T ++ F++A + + P + +I+G C+ G+ KALE +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+KG ++++ + L ++ + + +G V + +I+ K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 363 LDYAYQAFLTIE-------KPDTIAWTAIICA-YAYHGKSEAVKLFHKMLRSGVRPNAVT 414
LD +AF+ ++ KPD ++ +IC + + EA++ + R+G+ P+ T
Sbjct: 556 LD---EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 415 FIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
+ +++ C + +EG++F D M K V P YN +I Y R+G L ALE+ M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 475 P---FEPDTLSWKTLLGGCWSHRNLETASI---------AAGKIFHLDPL---------- 512
P++ ++ +L+ G +E A + +FH L
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 513 -----------------DSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
+ TY M +A GN EA++ M E+ +
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 217/519 (41%), Gaps = 40/519 (7%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSF 60
M+EA ++ + ++ + GM G + +F ++ I IL K
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL-----VKGL 340
Query: 61 TAAERVFD------EMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSS 110
T A+R+ D EM + ++ + +I ++ E G + AI + M+ G+ +S
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 111 SIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK 170
S + TL+ + + ++L +++ IGF + T++ + D A +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 171 MTTKNAVACTGLMVGYTQAL----RHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKD 226
M +N GL+ L +H+ AL L+ + + +G +D + +L
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 227 INTGRQIHSYSVKLG-LESEVSVGTPLVDFYSKCGRFEAACQAFESIRE-------PNDF 278
++ +I + G + VS T S C + +AF + E P+++
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNT----LISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
++S +I G + ++A++ + + + G++ + + Y+ + C G + +
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGKS 394
+ K + + +I Y + G+L A + ++ P++ +T++I + +
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 395 EAVKL-FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
E KL F +M G+ PN + L++ G + + + L M K V P Y
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVHPNKITYTV 755
Query: 454 MIGVYSRAGLLQEA---LEMIRSMPFEPDTLSWKTLLGG 489
MIG Y+R G + EA L +R PD++++K + G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 161/403 (39%), Gaps = 43/403 (10%)
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA 220
LD V NK + C L+ +A F + K GV D ++F+ + A
Sbjct: 211 LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINA 269
Query: 221 CAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAAC----QAFESIREPN 276
+ ++ S + G+ V ++D CGR++ A + E EP
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
++S ++ G ++ R A K + KG N VY N+ + L ++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYA---YQAFLTIE-KPDTIAWTAIICAYAYHG 392
+ KGL S + +I Y K G+ D A + L+I + ++T++IC H
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 393 K-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK---------QFLDSMSVKY 442
A++ +ML + P L+ SGL K GK QFL+ V
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLI-----SGLCKHGKHSKALELWFQFLNKGFV-- 502
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEP---DTLSWKTLLGGCWSHRNLETA 499
VD N ++ AG L EA + + + D +S+ TL+ GC + L+ A
Sbjct: 503 -VDTRTS--NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 500 SIAAGKIFH--LDPLDSATYVT----MFNLHALAGNWDEAAQY 536
+ ++ L P D+ TY +FN++ + +EA Q+
Sbjct: 560 FMFLDEMVKRGLKP-DNYTYSILICGLFNMNKV----EEAIQF 597
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 341 KGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK---PDTIAWTAIICAYAYHGK-SEA 396
KG+ + + ++T + + +AF + K PD +T I A+ GK EA
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 397 VKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIG 456
VKLF KM +GV PN VTF +++ G E F + M V+ G++PT+ Y+ ++
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM-VERGMEPTLITYSILVK 338
Query: 457 VYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETA-SIAAGKIFHLDPL 512
+RA + +A +++ M F P+ + + L+ +L A I + L
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 513 DSATYVTMFNLHALAGNWDEAAQYRKMM 540
S+TY T+ + G D A + K M
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEM 426
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 191/457 (41%), Gaps = 51/457 (11%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
+++ +R+ DE D+ ++ +I A + A +F +M KP + TLL
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG----WLDGAEVATNKMTT 173
F+D L+ KQ S++ + G DV T L + K G D +V ++
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
N L+ G + R DAL LF M GVK + + +
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV----------------- 438
Query: 234 HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQ 289
+D+Y K G +A + FE ++ PN + +A + +
Sbjct: 439 ------------------FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG 349
+GR +A + F ++ G++ +S Y + + S + ++ ++ ++ ++ G +
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 350 ESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGK-SEAVKLFHKML 404
+++I K ++D A++ F+ ++ KP + + ++ +GK EA++LF M+
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL 464
+ G PN +TF L + + V + L M + G P + YN +I + G +
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 465 QEALEMIRSMP--FEPDTLSWKTLLGGCWSHRNLETA 499
+EA+ M PD ++ TLL G +E A
Sbjct: 660 KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDA 696
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 211/505 (41%), Gaps = 30/505 (5%)
Query: 12 SYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
+Y L G G + + +LF +Q+ N N + C T A ++ +M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 71 VD----RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
+D D+F++ TII + G + A+ F +M L + P CTLL S +
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 693
Query: 127 ELGKQLHSQLIR--IGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTG--- 181
E ++ + + A++ E + ++ + G +D A V+ ++ N + G
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG-IDNA-VSFSERLVANGICRDGDSI 751
Query: 182 LMVGYTQALRHTD---ALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
L+ + +H + A LF K K+ GV+ +++++ I + +
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRF 293
G +V+ L+D Y K G+ + + ++ + E N + + +I+G ++G
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 294 DKALETFKNIRS-KGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
D AL+ + ++ S + + Y + S L Q+ + G + +
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 353 MITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSG 407
+I + K G+ D A F + K PD ++ ++ G+ E + F ++ SG
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 408 VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
+ P+ V + ++N S ++E + M G+ P + YN +I AG+++EA
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 468 LEM---IRSMPFEPDTLSWKTLLGG 489
++ I+ EP+ ++ L+ G
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/495 (18%), Positives = 198/495 (40%), Gaps = 55/495 (11%)
Query: 81 IISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG 140
++ A +G + +F M IK ++ + T+ S + L+ ++ G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 141 FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NAVACTGLMVGYTQALRHTDAL 196
F + L ++ +K + A +M + + + LMVG + R D++
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR-RDIDSV 242
Query: 197 L-LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDF 255
+ L +M G+K + + F+I ++ IN +I G +V T L+D
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 256 YSKCGRFEAACQAFESIRE---------------------------------------PN 276
+ + A + FE ++ P+
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
+++ ++ C++G F +A +T +R +G++ N Y + + L ++
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHG 392
+ G+ I Y K G A + F ++ P+ +A A + + A G
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 393 KS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY 451
+ EA ++F+ + G+ P++VT+ ++ S G + E + L M ++ G +P +
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MENGCEPDVIVV 541
Query: 452 NCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWKTLLGGCWSHRNLETA-SIAAGKIF 507
N +I +A + EA +M ++ M +P +++ TLL G + ++ A + G +
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 508 HLDPLDSATYVTMFN 522
P ++ T+ T+F+
Sbjct: 602 KGCPPNTITFNTLFD 616
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 51/405 (12%)
Query: 63 AERVFDEMVDRDLFSWATIISAYA-EEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSF 120
+ER+ + RD S I Y+ + ++ GA LF + DLG++P + L+G
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NA 176
+ +E+ + + Q+ G DV+ L + Y K G +D +M+T N
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
+ ++ G +A DAL L+ D+ + R
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYY-------------------------DLMSDRDFSPT 890
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGR 292
+ G PL+D SK GR A Q FE + + PN ++ +I G+ ++G
Sbjct: 891 ACTYG---------PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
D A FK + +GV + Y+ + + + G + + GL + +
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 353 MITMYSKCGKLDYAYQAFLTIEK-----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRS 406
+I K +L+ A F ++ PD + ++I G EA K+++++ R+
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHY 451
G+ PN TF L+ S SG + +M V G P Y
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM-VTGGFSPNTGTY 1105
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 155/404 (38%), Gaps = 45/404 (11%)
Query: 159 GWLDGAEVATNKMT----TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF 214
G L A A KM NA + GL+ ++ T+A+ ++ +MI EG + +
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 215 SIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE 274
S ++ +DI++ + LGL+ V T + + G+ A + + + +
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 275 ----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVY 330
P+ +++ +I C + + D A E F+ +++ + Y + S DL
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 331 GAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIIC 386
Q ++ K G V + + ++ K G A+ + P+ + +IC
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 387 AY-AYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVD 445
H +A++LF M GV+P A T+I ++ SG + + M K G+
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIA 465
Query: 446 PTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGK 505
P I N + ++AG +EA ++ + K
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGL------------------------------K 495
Query: 506 IFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
L P DS TY M ++ G DEA + M E +V
Sbjct: 496 DIGLVP-DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 104/562 (18%), Positives = 198/562 (35%), Gaps = 88/562 (15%)
Query: 9 DPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVF 67
D +Y + K +G + + KL ++ + + N ++ A ++F
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 68 DEMVDRDL----FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADP 123
M + L ++ T+++ + G + AI LF M+ G P++ F TL
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 124 SALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEV---ATNKMTTKNAVACT 180
+ L ++ +++ +G DV T+ +K G + A K+ + V
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLC 681
Query: 181 GLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVF-SIVLKACAALKDINTGRQIHSYSVK 239
L+ G +A DA + + +F ++ + A I+ V
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 240 LGL-ESEVSVGTPLVDFYSKCGRFEAACQAFESIR-----EPNDFSWSAIITGYCQSGRF 293
G+ S+ P++ + K A FE +P +++ +I G ++
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
+ A + F ++S G I + Y + A
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDA-------------------------------- 829
Query: 354 ITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRS-G 407
Y K GK+D ++ + + + +TI +I G +A+ L++ ++
Sbjct: 830 ---YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 408 VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
P A T+ L++ S SG + E KQ + M + YG P YN +I + +AG A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGM-LDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 468 LEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALA 527
+ + M E + P D TY + + +
Sbjct: 946 CALFKRMVKE------------------------------GVRP-DLKTYSVLVDCLCMV 974
Query: 528 GNWDEAAQYRKMMAERNLRKEV 549
G DE Y K + E L +V
Sbjct: 975 GRVDEGLHYFKELKESGLNPDV 996
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 111/268 (41%), Gaps = 44/268 (16%)
Query: 62 AAERVFDEMVDRDLF----SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
A + +D M DRD ++ +I ++ G + A +LF MLD G +P+ +I+ L+
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA-----EVATNKMT 172
F + L ++++ G D+ + L + G +D E+ + +
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 173 TKNAVACTGLMV-GYTQALRHTDALLLFAKM-IKEGVKLDEFVFSIVLKACAALKDINTG 230
V C L++ G ++ R +AL+LF +M G+ D + ++ ++ +
Sbjct: 994 PD--VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 231 RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQS 290
+I++ + GLE PN F+++A+I GY S
Sbjct: 1052 GKIYNEIQRAGLE-------------------------------PNVFTFNALIRGYSLS 1080
Query: 291 GRFDKALETFKNIRSKGVILNSFVYTNI 318
G+ + A ++ + + G N+ Y +
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 207/461 (44%), Gaps = 23/461 (4%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMV----DRDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N ++ +C A V +M+ + D+ + +++++ Y + A+ L +M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 104 LGIKPSSSIFCTLL-GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
+ +P++ F TL+ G F A E L +++ G D+ T+ N K G +D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASE-AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRH----TDALLLFAKMIKEGVKLDEFVFSIVL 218
A KM A + AL + DAL LF +M +G++ + ++ ++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----E 274
+ + ++ S ++ + V + L+D + K G+ A + ++ + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P+ F++S++I G+C R D+A F+ + SK N Y + + + G ++
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI----EKPDTIAWTAIICAYAY 390
+ ++GLV + +I + G D A + F + PD I ++ ++
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 391 HGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
+GK E A+ +F + +S + P+ T+ ++ +G V++G S+S+K GV P +
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVI 536
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLL 487
Y MI + R GL +EA + R M + P++ ++ TL+
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 149/337 (44%), Gaps = 13/337 (3%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N +++ C+ ++ A R+ +M++R ++ +++ +I A+ +EG ++ A +L+ M+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
I P + +L+ F L+ K + +I +V TL + K ++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 164 AEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
+M+ + N V L+ G QA A +F KM+ +GV D +SI+L
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EP 275
+ + Y K +E ++ +++ K G+ E F S+ +P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N ++ +I+G+C+ G ++A F+ ++ G + NS Y + +A D A++
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLT 372
+ G V S S +I M G+L+ +Y L+
Sbjct: 594 KEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEMLS 629
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 375 KPDTIAWTAIICAYAYHGK--SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
+PD + ++++ Y HGK SEAV L +M +PN VTF L++ E
Sbjct: 147 EPDIVTLSSLLNGYC-HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGG 489
+D M V G P + Y ++ + G + AL +++ M E D + + T++
Sbjct: 206 ALIDRM-VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 490 CWSHRNLETASIAAGKIFH--LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRK 547
+++N+ A ++ + + P + TY ++ G W +A++ M ER +
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 548 EV 549
V
Sbjct: 324 NV 325
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/508 (23%), Positives = 213/508 (41%), Gaps = 31/508 (6%)
Query: 45 FIDNCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSR 100
F N I+ + D F A +V+ M DR D++S+ + ++ + A+RL +
Sbjct: 112 FSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNN 171
Query: 101 MLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW 160
M G + + +CT++G F + + G +L +++ G + +S L + K G
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 161 LDGAEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSI 216
+ E +K+ + N + G Q A+ + +I++G K D ++
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ----AFESI 272
++ V GLE + L+ Y K G + A + A +
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGA 332
P+ F++ ++I G C G ++AL F KG+ N +Y + + S ++ A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 333 QVHADAIKKGLVQYLSGESAMITMYSKCGKL-DYAYQAFLTIEK---PDTIAWTAIICAY 388
Q+ + +KGL+ + + ++ K G + D + I K PD + +I Y
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 389 AYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMS-----VKY 442
+ K E A+++ ML +GV P+ T+ LLN GL K K F D M V+
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLN-----GLCKTSK-FEDVMETYKTMVEK 525
Query: 443 GVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETA 499
G P + +N ++ R L EAL ++ M PD +++ TL+ G + +L+ A
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 500 SIAAGKIFHLDPLDSATYVTMFNLHALA 527
K+ + S+T +HA
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/484 (19%), Positives = 189/484 (39%), Gaps = 55/484 (11%)
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
+ + Y +G + A+ +F RM +P+ + ++ D + +++ ++
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 138 RIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NAVACTGLMVGYTQALRHT 193
G T DV T + K A N M+++ N VA ++ G+ +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+ LF KM+ GV L F+ +L+ D+ ++ +K G+
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV----------- 247
Query: 254 DFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
PN F+++ I G CQ G D A+ + +G +
Sbjct: 248 --------------------LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL--------DY 365
Y N+ S + +GL + +I Y K G + D
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 366 AYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
+ F+ PD + ++I + G++ A+ LF++ L G++PN + + L+ S+
Sbjct: 348 VFNGFV----PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTL 481
G++ E Q + MS K G+ P + +N ++ + G + +A +++ M + PD
Sbjct: 404 QGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 482 SWKTLLGGCWSHRNLETASIAAGKIFH--LDPLDSATYVTMFNLHALAGNWDEAAQYRKM 539
++ L+ G + +E A + +DP D TY ++ N +++ + K
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDP-DVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 540 MAER 543
M E+
Sbjct: 522 MVEK 525
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 157/387 (40%), Gaps = 18/387 (4%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N ++ YC AER+ + V D F++ ++I EG A+ LF+ L
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
GIKP+ ++ TL+ ++ + QL +++ G +V L N K G +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 164 AEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
A+ M +K + L+ GY+ L+ +AL + M+ GV D + ++ +L
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----P 275
+ + V+ G + L++ + + + A E ++ P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF-VYTNIFQACSAISDLVYGAQV 334
+ ++ +I G+C++G D A F+ + + +S Y I A + ++ ++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAII-CAYA 389
+ + + L M+ + K G ++ Y+ L + + P +I C
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684
Query: 390 YHGKSEAVKLFHKMLRSGVRPNAVTFI 416
EA + H+M++ G+ P AV I
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVPEAVNTI 711
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/483 (19%), Positives = 184/483 (38%), Gaps = 50/483 (10%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N +L++ C E++ D+++ R +LF++ I + G + GA+R+ +++
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
G KP + L+ S + + +++ G D TL Y K G +
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 164 AEVATNKMT----TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
AE + L+ G AL LF + + +G+K + +++ ++K
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----P 275
+ I Q+ + + GL EV LV+ K G A + + P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
+ F+++ +I GY + + ALE + GV + + Y ++ S + +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE 395
++KG L + ++ + KLD E
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLD------------------------------E 549
Query: 396 AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMI 455
A+ L +M V P+AVTF L++ +G + M Y V + YN +I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 456 GVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPL 512
++ + A ++ + M PD +++ ++ G +T ++ G F L+ +
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC-----KTGNVNLGYKFLLEMM 664
Query: 513 DSA 515
++
Sbjct: 665 ENG 667
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 26/303 (8%)
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
F +M + GV+ D F+ +L C+ R + +E +V L+D
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 258 KCGR----FEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
K G+ FE Q PN S+S +I G+ ++GRFD+AL F +R G+ L+
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 314 -------VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYA 366
+YT + ++ A+ L A V IKK +V Y +A++ Y K GK D
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASV---GIKKDVVTY----NALLGGYGKQGKYDEV 498
Query: 367 YQAFLTIEK----PDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNA 421
+ F +++ P+ + ++ +I Y+ G EA+++F + +G+R + V + L++A
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 422 CSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR--SMPFEPD 479
+GLV +D M+ K G+ P + YN +I + R+ + + + S+PF
Sbjct: 559 LCKNGLVGSAVSLIDEMT-KEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSS 617
Query: 480 TLS 482
LS
Sbjct: 618 ALS 620
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 51/420 (12%)
Query: 66 VFDEMVD----RDLFSWATIISAYAEEGHMIGAI-RLFSRMLDLGIKPSSSIFCTLLGSF 120
VF+ M + +L ++ +I A + G + + F M G++P F +LL
Sbjct: 290 VFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVC 349
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NA 176
+ E + L ++ DV TL + K G +D A +M K N
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
V+ + ++ G+ +A R +AL LF +M G+ LD ++ +L + I
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGR 292
+G++ +V L+ Y K G+++ + F ++ PN ++S +I GY + G
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQAC-------SAISDLVYGAQVHADAIKKGLVQ 345
+ +A+E F+ +S G+ + +Y+ + A SA+S + ++ + I +V
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI---DEMTKEGISPNVVT 586
Query: 346 YLS-----GESAMITM---YSKCGKLDYAYQAF-----------------LTIEKPDTIA 380
Y S G SA + YS G L ++ A LT E +
Sbjct: 587 YNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNR-- 644
Query: 381 WTAIICAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSV 440
T C S +++F KM + ++PN VTF +LNACS ++ L+ + +
Sbjct: 645 -TTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 703
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 351 SAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYHGKS--EAVKLFHKML 404
SA+I+ Y + G + A F +++ +P+ + + A+I A G + K F +M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLL 464
R+GV+P+ +TF LL CS GL + + D M+ + ++ + YN ++ + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQM 390
Query: 465 QEALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD-PLDSATYVTM 520
A E++ MP + P+ +S+ T++ G + A G++ +L LD +Y T+
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 521 FNLHALAGNWDEAAQYRKMMAERNLRKEV 549
+++ G +EA + MA ++K+V
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDV 479
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 130/288 (45%), Gaps = 23/288 (7%)
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS-DLVYGAQVHA 336
+++SA+I+ Y +SG ++A+ F +++ G+ N Y + AC + A+
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF-----LTIEKPDTIAWTAIICAYAYH 391
+ + G+ ++++ + S+ G + A F IE+ D ++ ++ A
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ-DVFSYNTLLDAICKG 387
Query: 392 GKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
G+ + A ++ +M + PN V++ +++ + +G E M G+
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LGIALDRVS 446
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIF 507
YN ++ +Y++ G +EAL+++R M + D +++ LLGG + K+F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK----KVF 502
Query: 508 ------HLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
H+ P + TY T+ + ++ G + EA + + LR +V
Sbjct: 503 TEMKREHVLP-NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 165/366 (45%), Gaps = 16/366 (4%)
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
+F +M++ V + F ++I+++ +I+ + G V L+D Y
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 258 KCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
K + + + S+ EPN S++ +I G C+ GR + + +G L+
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI 373
Y + + + +HA+ ++ GL + +++I K G ++ A + FL
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQ 370
Query: 374 EK-----PDTIAWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGL 427
+ P+ +T ++ ++ G +EA ++ +M +G P+ VT+ L+N +G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 428 VKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWK 484
+++ L+ M K G+ P + Y+ ++ + R+ + EAL + R M +PDT+++
Sbjct: 431 MEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 485 TLLGG-CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAER 543
+L+ G C R E + + P D TY + N + + G+ ++A Q M E+
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 544 NLRKEV 549
+ +V
Sbjct: 550 GVLPDV 555
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/451 (19%), Positives = 174/451 (38%), Gaps = 87/451 (19%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N ++ C V EM R D ++ T+I Y +EG+ A+ + + ML
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
G+ PS + +L+ S + + Q+ G + TTL + + + G+++
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 164 AEVATNKMT----TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
A +M + + V L+ G+ + DA+ + M ++G+ D +S VL
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFS 279
D++ ++ V+ G++ P+ +
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIK-------------------------------PDTIT 487
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAI 339
+S++I G+C+ R +A + ++ + G+ + F YT + A DL Q+H + +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 340 KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKS-EAVK 398
+KG++ PD + ++ +I ++ EA +
Sbjct: 548 EKGVL-------------------------------PDVVTYSVLINGLNKQSRTREAKR 576
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSH---------------SGLVKEGKQFLDSMSVKYG 443
L K+ P+ VT+ L+ CS+ G++ E Q +SM K
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK-N 635
Query: 444 VDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
P YN MI + RAG +++A + + M
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/392 (19%), Positives = 158/392 (40%), Gaps = 28/392 (7%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFID-NCILQMYCDCKS 59
M+ S+D +Y L K G + H + R I ++ C +
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 60 FTAAERVFDEMVDRDL----FSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
A D+M R L ++ T++ ++++G+M A R+ M D G PS +
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK- 174
L+ +E + + G + DV +T+ + + + +D A +M K
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 175 ---NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
+ + + L+ G+ + R +A L+ +M++ G+ DEF ++ ++ A D+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAA----CQAFESIREPNDFSWS------ 281
Q+H+ V+ G+ +V + L++ +K R A + F P+D ++
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 282 ---------AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGA 332
++I G+C G +A + F+++ K + Y + D+
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 333 QVHADAIKKGLVQYLSGESAMITMYSKCGKLD 364
++ + +K G + + A++ K GK++
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 376 PDTIAWTAIICAYAYHGK--SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ 433
P +++ A++ A + S A +F +ML S V PN T+ L+ +G +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 434 FLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGG- 489
D M K G P + YN +I Y + + + +++RSM EP+ +S+ ++ G
Sbjct: 227 LFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 490 CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA 533
C R E + + LD TY T+ + GN+ +A
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 210/515 (40%), Gaps = 85/515 (16%)
Query: 48 NCILQMYCDCKSFTAAERVFDEM----VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N ++ +Y A +F EM V D ++ T+I GH+ A L +M +
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
GI P + + LL AD +E + + ++ ++G D + +
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH---------- 418
Query: 164 AEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
+ C MV +A + A+M + +++DE ++++
Sbjct: 419 -------------ILCQRKMVAEVEA--------VIAEMDRNSIRIDEHSVPVIMQMY-- 455
Query: 224 LKDINTGRQIHSYSV--KLGLESEVSVGT--PLVDFYSKCGRFEAACQAFESIR----EP 275
+N G + + ++ + L+ +S T ++D Y++ G + A F R +
Sbjct: 456 ---VNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR 512
Query: 276 ND-FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
ND ++ +I Y ++ +KAL FK ++++G + Y ++FQ + + DLV
Sbjct: 513 NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV-DLV----- 566
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-K 393
D ++ L + L S C KP + A+I +Y G
Sbjct: 567 --DEAQRILAEMLD---------SGC--------------KPGCKTYAAMIASYVRLGLL 601
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
S+AV L+ M ++GV+PN V + L+N + SG+V+E Q+ M ++GV
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME-EHGVQSNHIVLTS 660
Query: 454 MIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD 510
+I YS+ G L+EA + M PD + ++L C + A +
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
D ++ TM L+ G DEA + + M E L
Sbjct: 721 TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 24/246 (9%)
Query: 252 LVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKG 307
LVD Y K G + A + + + P++ + + ++ + SG FD+A FK +
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 308 VILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK-LDYA 366
V L+ +I D + L Q+LS E + + K L +A
Sbjct: 246 VDLD----------LDSIDDFPKNGSAQSPV---NLKQFLSMELFKVGARNPIEKSLHFA 292
Query: 367 YQAFLTIEKPD-TIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
+ + KP T + +I Y G+ ++A LF +ML+SGV + VTF +++ C
Sbjct: 293 SGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGT 352
Query: 425 SGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTL 481
G + E + L M K G+ P YN ++ +++ AG ++ ALE IR + PDT+
Sbjct: 353 HGHLSEAESLLKKMEEK-GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTV 411
Query: 482 SWKTLL 487
+ + +L
Sbjct: 412 THRAVL 417
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/486 (19%), Positives = 189/486 (38%), Gaps = 27/486 (5%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSF 60
MD I ID S + +M G + K R Q + ++ +Y + +
Sbjct: 436 MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW 495
Query: 61 TAAERVFDEMVD-----RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
AE VF + D+ + +I AY + A+ LF M + G P + +
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA----EVATNKM 171
L A ++ +++ ++++ G + Y++ G L A E
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 172 TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
N V L+ G+ ++ +A+ F M + GV+ + V + ++KA + + + R
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPND---FSWSAIITGYC 288
+++ +V+ ++ + G A F ++RE S++ ++ Y
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYK 735
Query: 289 QSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV-HADAIKKGLVQYL 347
G D+A+E + +R G++ + + + +A L ++ H +++ L+
Sbjct: 736 GMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDW 795
Query: 348 SGESAMITMYSKCG-------KLDYAYQAFLTIEKPD-TIAWTAIICAYAYHGKSEAVKL 399
+ T+ K G +L AY + P T + + YAY +S
Sbjct: 796 GTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELT 855
Query: 400 FHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYS 459
++ R NAV + S SG + + M K G++P I ++G+Y
Sbjct: 856 SGEIPREHFAYNAVIY-----TYSASGDIDMALKAYMRMQEK-GLEPDIVTQAYLVGIYG 909
Query: 460 RAGLLQ 465
+AG+++
Sbjct: 910 KAGMVE 915
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
CQ + A+E + KG + + + +F++C+ + L + +VH ++
Sbjct: 216 CQRRLYKDAIE----LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP 271
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHG-KSEAVKLFHKMLRS 406
+ +I+M+ +C + A + F + D +W ++CAY+ +G +A+ LF +M +
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G++PN TF+ + AC+ G ++E DSM ++G+ P +HY ++GV + G L E
Sbjct: 332 GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDP 511
A + IR +PFEP W+ + H +++ + +DP
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 16 LFKMCGMLGALSDGKLFHNR-LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
LF+ C L +L K H+ LQ G+ ++N ++ M+ +C S T A+RVFD MVD+D
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
+ SW ++ AY++ G A+ LF M G+KP+ F T+
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 2/185 (1%)
Query: 101 MLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGW 160
+LD G P F L S A+ +LE K++H ++ F D + + +M+ +C
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 161 LDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKA 220
+ A+ + M K+ + +M Y+ DAL LF +M K G+K +E F V A
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 346
Query: 221 CAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-EPNDF 278
CA + I S + G+ + ++ KCG A Q + EP
Sbjct: 347 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTAD 406
Query: 279 SWSAI 283
W A+
Sbjct: 407 FWEAM 411
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 201 KMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
+++ +G D F ++ ++CA LK + +++H + ++ + + ++ + +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 261 RFEAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQ 320
A + F+ + + + SW ++ Y +G D AL F+ + G+ N + +F
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 321 ACSAISDLVYGAQVHADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-KPD 377
AC+ + + A +H D++K G+ ++ + KCG L A Q + +P
Sbjct: 346 ACATVGG-IEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 378 TIAWTAIICAYAYHG 392
W A+ HG
Sbjct: 405 ADFWEAMRNYARLHG 419
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 183/443 (41%), Gaps = 60/443 (13%)
Query: 69 EMVDR--------DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSF 120
E+VDR DL + T+++ G A+ L +M++ G +P++ + +L
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 121 ADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----TTKNA 176
L +L ++ D + + + K G LD A N+M T N
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 177 VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSY 236
+ L+ G+ A R D L MIK + + FS+++ + + ++H
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 237 SVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGR 292
+ G+ + T L+D + K + A Q + + +PN +++ +I GYC++ R
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 293 FDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
D LE F+ + +GV+ ++ Y + Q
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQG------------------------------- 447
Query: 353 MITMYSKCGKLDYAYQAFLTI----EKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSG 407
+ + GKL+ A + F + P+ + + ++ +G+SE A+++F K+ +S
Sbjct: 448 ----FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 408 VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEA 467
+ + + +++ ++ V + S+ +K GV P + YN MIG + G L EA
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 468 LEMIRSMPFE---PDTLSWKTLL 487
+ R M + PD ++ L+
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILI 585
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAIS--DLVYGAQVHADAIKKGLVQYLSGES 351
D A++ F+++ + ++ +F A + DLV + KG+ L S
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL--KGIAHNLYTLS 127
Query: 352 AMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRS 406
MI + +C KL A+ A I K P+TI ++ +I G+ SEA++L +M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G +P+ +T L+N SG E +D M V+YG P Y ++ V ++G
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 467 ALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH-LDPLDSATYVTMFN 522
A+E++R M + D + + ++ G H +L+ A +F+ ++ T + +N
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF----NLFNEMEMKGITTNIITYN 302
Query: 523 L----HALAGNWDEAAQYRKMMAERNLRKEV 549
+ AG WD+ A+ + M +R + V
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 169/451 (37%), Gaps = 79/451 (17%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M+E I +D Y + G+L + LF+ + N N ++ +C+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
+ ++ +M+ R ++ +++ +I ++ +EG + A L M+ GI P + + +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L+ F + L+ Q+ ++ G ++ L N Y K +D
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID------------- 420
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
D L LF KM GV D ++ +++ L +N +++
Sbjct: 421 ------------------DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL-- 460
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRFDK 295
+ VS P PN ++ ++ G C +G +K
Sbjct: 461 ------FQEMVSRKVP-----------------------PNIVTYKILLDGLCDNGESEK 491
Query: 296 ALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMIT 355
ALE F+ I + L+ +Y I S + + KG+ + + MI
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 356 MYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGKSEA---VKLFHKMLRSGV 408
K G L A F +E+ PD WT I A+ G +A VKL ++ R G
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPD--GWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Query: 409 RPNAVTFIGLLNACSHSGLVKEGKQFLDSMS 439
+A T +++ S L K FLD +S
Sbjct: 610 SVDASTIKMVIDMLSDGRL---KKSFLDMLS 637
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 211/498 (42%), Gaps = 22/498 (4%)
Query: 66 VFDEMVDRDLF----SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFA 121
+F EMV F ++ ++SA A+ I L +M +LGI + + L+ F
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 122 DPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT----KNAV 177
S L L + +++++G+ ++ ++L N Y + A ++M N V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
L+ G + ++A+ L +M+ +G + D + +V+ D + + +
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRF 293
+ LE V + ++D K + A F+ + PN ++S++I+ C GR+
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
A ++ + + + F ++ + A LV +++ + +K+ + + S++
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 354 ITMYSKCGKLDYAYQAF-LTIEK---PDTIAWTAIICAY-AYHGKSEAVKLFHKMLRSGV 408
I + +LD A Q F + K PD + + +I + Y E +++F +M + G+
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 409 RPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL 468
N VT+ L+ +G ++ M V GV P I YN ++ + G L++A+
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 469 ---EMIRSMPFEPDTLSWKTLLGG-CWSHRNLETASIAAGKIFHLDPLDSATYVTMFNLH 524
E ++ EP ++ ++ G C + + + + D Y TM +
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 525 ALAGNWDEAAQYRKMMAE 542
G+ +EA K M E
Sbjct: 547 CRKGSKEEADALFKEMKE 564
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 181/442 (40%), Gaps = 18/442 (4%)
Query: 50 ILQMYCDCKSFTAAERVFDEMV----DRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLG 105
+L YC K + A + D+M + ++ T+I A+ L RM+ G
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 106 IKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE 165
+P + ++ +L L +++ + V I T+ + K +D A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 166 VATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKAC 221
+M TK N V + L+ R +DA L + MI+ + D F FS ++ A
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 222 AALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PND 277
+ +++ VK ++ + + L++ + R + A Q FE + P+
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHAD 337
+++ +I G+C+ R ++ +E F+ + +G++ N+ Y + Q D ++ +
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 338 AIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK 393
+ G+ + + ++ K GKL+ A F +++ P + +I GK
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 394 SE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYN 452
E LF + GV+P+ V + +++ G +E M + G P YN
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK-EDGTLPNSGCYN 575
Query: 453 CMIGVYSRAGLLQEALEMIRSM 474
+I R G + + E+I+ M
Sbjct: 576 TLIRARLRDGDREASAELIKEM 597
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 160/394 (40%), Gaps = 74/394 (18%)
Query: 55 CDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSS 110
C+ ++ A R+ +M++R D+F+++ +I A+ +EG ++ A +L+ M+ I PS
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 111 SIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNK 170
+ +L+ F L+ KQ+ E +K
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMF-------------------------------EFMVSK 390
Query: 171 MTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTG 230
+ V L+ G+ + R + + +F +M + G+ + ++I+++ D +
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 231 RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITG 286
++I V G+ + L+D K G+ E A FE ++ EP ++++ +I G
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 287 YCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA-CSAISDLVYGAQVHADAIKKGLVQ 345
C++G+ + + F N+ KGV + Y + C G++ ADA+ K +
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK------GSKEEADALFKEM-- 562
Query: 346 YLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLR 405
+ G L P++ + +I A G EA K +R
Sbjct: 563 ------------KEDGTL------------PNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 406 SGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMS 439
S + IGL+ H G + K FLD +S
Sbjct: 599 SCGFAGDASTIGLVTNMLHDG--RLDKSFLDMLS 630
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 157/386 (40%), Gaps = 48/386 (12%)
Query: 190 LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVG 249
L+ DA+ LF +M+K FS +L A A + + + LG+
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 250 TPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRS 305
+ L++ + + + A + EPN + S+++ GYC S R +A+ +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 306 KGVILNSFVYTNIFQACSAISDLVYGAQVHADA----------IKKGLVQYLSGESAMIT 355
G N+ + L++G +H A + KG L ++
Sbjct: 180 TGYQPNTVTFNT----------LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 356 MYSKCGKLDYAYQAFLTIEK----PDTIAWTAII---CAYAYHGKSEAVKLFHKMLRSGV 408
K G D A+ +E+ P + + II C Y + +A+ LF +M G+
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM--DDALNLFKEMETKGI 287
Query: 409 RPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL 468
RPN VT+ L++ + G + + L M ++ ++P + ++ +I + + G L EA
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 469 EMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASIAAGKIF------HLDPLDSATYVT 519
++ M +P +++ +L+ G H L+ A ++F H P D TY T
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK----QMFEFMVSKHCFP-DVVTYNT 401
Query: 520 MFNLHALAGNWDEAAQYRKMMAERNL 545
+ +E + + M++R L
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGL 427
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/384 (18%), Positives = 154/384 (40%), Gaps = 47/384 (12%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M+ I + +Y L G SD +L + ++R N + F + ++ +
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
AE+++DEMV R + +++++I+ + + A ++F M+ P + T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L+ F +E G ++ ++ + G N
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVG-------------------------------N 430
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
V L+ G QA A +F +M+ +GV + ++ +L + +
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSG 291
Y + +E + +++ K G+ E F ++ +P+ +++ +I+G+C+ G
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGES 351
++A FK ++ G + NS Y + +A D + A+ IK+ +G++
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD----REASAELIKEMRSCGFAGDA 606
Query: 352 AMITMYSKC---GKLDYAYQAFLT 372
+ I + + G+LD ++ L+
Sbjct: 607 STIGLVTNMLHDGRLDKSFLDMLS 630
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 112/280 (40%), Gaps = 37/280 (13%)
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P+ +S +++ + +FD + + +++ G+ N + Y+ + S L V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAY----QAFLTIEKPDTIAWTAIICAYAY 390
+K G + S+++ Y ++ A Q F+T +P+T+ + +I
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 391 HGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
H K SEA+ L +M+ G +P+ VT+ ++N G L+ M + ++P +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVL 257
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHL 509
YN +I + + +AL + + M ET I +
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEM----------------------ETKGIRPNVV--- 292
Query: 510 DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
TY ++ + G W +A++ M ER + +V
Sbjct: 293 ------TYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 185/448 (41%), Gaps = 26/448 (5%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVD----RDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N +L +C + A + +MV+ D F++ T+I A+ L RM+
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 104 LGIKPSSSIFCTLLGSFADPS----ALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG 159
G +P + ++ AL L K++ I G +I L N
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 160 WLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
L+ NK N V L+ R +DA L + MI+ + + FS ++
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----P 275
A + +++ +K ++ ++ + L++ + R + A FE + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNI----FQACSAISDLVYG 331
N +++ +I G+C++ R D+ +E F+ + +G++ N+ YT + FQA + +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICA 387
Q+ +D + ++ Y S ++ GK++ A F +++ PD + +I
Sbjct: 455 KQMVSDGVLPDIMTY----SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 388 YAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
GK E LF + GV+PN VT+ +++ GL +E M + G P
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK-EEGPLP 569
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSM 474
YN +I + R G + E+IR M
Sbjct: 570 DSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 186/456 (40%), Gaps = 48/456 (10%)
Query: 63 AERVFDEMVDRDLF----SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
A +F +MV F ++ ++SA A+ I L +M +LGI + + L+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVA 178
F S L L + ++++++G+ D+ V
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDI-------------------------------VT 153
Query: 179 CTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSV 238
L+ G+ R +DA+ L +M++ G + D F F+ ++ + + V
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFD 294
G + ++ +V+ K G + A + + EP ++ II C +
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 295 KALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMI 354
AL F + +KG+ N Y ++ + +++ +D I++ + + SA+I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 355 TMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVR 409
+ K GKL A + + + K PD ++++I + H + EA +F M+
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 410 PNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALE 469
PN VT+ L+ + V EG + MS + V T+ Y +I + +A A
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDNAQI 452
Query: 470 MIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIA 502
+ + M + PD +++ LL G ++ +ETA +
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 141/330 (42%), Gaps = 40/330 (12%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKS 59
MD I + +Y L + G SD +L + ++R N N + ++ +
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
AE+++DEM+ R D+F+++++I+ + + A +F M+ P+ + T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKN 175
L+ F ++ G +L ++ + G + TTL +
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH---------------------- 439
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
G+ QA +A ++F +M+ +GV D +SI+L + T +
Sbjct: 440 ---------GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 236 YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSG 291
Y + +E ++ +++ K G+ E F S+ +PN +++ +++G+C+ G
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQA 321
++A F+ ++ +G + +S Y + +A
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 116/272 (42%), Gaps = 20/272 (7%)
Query: 292 RFDKALETFKNIRSKGVILNSFVYTNIFQACSAIS--DLV--YGAQVHADAIKKGLVQYL 347
+ D A+ F ++ + ++ + A + ++ DLV G Q+ I L Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY- 119
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHK 402
S +I + + +L A + K PD + +++ + + + S+AV L +
Sbjct: 120 ---SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 403 MLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAG 462
M+ G +P++ TF L++ E +D M VK G P + Y ++ + G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRG 235
Query: 463 LLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRNLETASIAAGKIFH--LDPLDSATY 517
+ AL +++ M EP + + T++ +++N+ A ++ + + P + TY
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTY 294
Query: 518 VTMFNLHALAGNWDEAAQYRKMMAERNLRKEV 549
++ G W +A++ M ER + V
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 186/459 (40%), Gaps = 50/459 (10%)
Query: 48 NCILQMYCDCKSFTAAERVFDEM----VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N +L YC F AA + D M VD D+ ++ +I + L M
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
I P+ + TL+ F++ + + QL ++++ G +
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP-------------------- 371
Query: 164 AEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
N V L+ G+ +AL +F M +G+ E + ++L
Sbjct: 372 -----------NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFS 279
+ + R + + G+ T ++D K G + A + +P+ +
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAI 339
+SA+I G+C+ GRF A E I G+ N +Y+ + C + L +++ I
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 340 KKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGKS- 394
+G + + ++T K GK+ A + + P+T+++ +I Y G+
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM-SVKYGVDPTIDHYNC 453
+A +F +M + G P T+ LL G ++E ++FL S+ +V VD + YN
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM--YNT 658
Query: 454 MIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGG 489
++ ++G L +A+ + M PD+ ++ +L+ G
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 189/447 (42%), Gaps = 55/447 (12%)
Query: 78 WATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLI 137
+ +I Y EG + ++ +F M G PS +LGS +++
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 138 RIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQAL------- 190
+ DV+ L N+ G + + KM K+ A T +V Y L
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKSGYAPT--IVTYNTVLHWYCKKG 282
Query: 191 RHTDALLLFAKMIKEGVKLDEFVFSIVL----------KACAALKDINTGRQIHSYSVKL 240
R A+ L M +GV D +++++ K L+D+ R IH
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK-RMIHP----- 336
Query: 241 GLESEVSVGTPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIITGYCQSGRFDKA 296
+EV+ T L++ +S G+ A Q + PN +++A+I G+ G F +A
Sbjct: 337 ---NEVTYNT-LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 297 LETFKNIRSKGVILNSFVYTNIFQAC--SAISDLVYG--AQVHADAIKKGLVQYLSGESA 352
L+ F + +KG+ + Y + +A DL G ++ + + G + Y +
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY----TG 448
Query: 353 MITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGKSEAVK-LFHKMLRSG 407
MI K G LD A + K PD + ++A+I + G+ + K + ++ R G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 408 VRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH--YNCMIGVYSRAGLLQ 465
+ PN + + L+ C G +KE + ++M ++ T DH +N ++ +AG +
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE---GHTRDHFTFNVLVTSLCKAGKVA 565
Query: 466 EALEMIRSMPFE---PDTLSWKTLLGG 489
EA E +R M + P+T+S+ L+ G
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLING 592
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/482 (20%), Positives = 192/482 (39%), Gaps = 61/482 (12%)
Query: 31 LFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDL----FSWATIISAYA 86
L + +RM + N+ N ++ + + A ++ +EM+ L ++ +I +
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 87 EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVS 146
EG+ A+++F M G+ PS + LL + +L + + ++ R G
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 147 IETTLSNMYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGYTQALRHTDALLLFAKM 202
T + + K G+LD A V N+M+ + V + L+ G+ + R A + ++
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 203 IKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRF 262
+ G+ + ++S ++ C + + +I+ + G + LV K G+
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 263 EAA-----CQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTN 317
A C + I PN S+ +I GY SG KA F + G F Y +
Sbjct: 565 AEAEEFMRCMTSDGIL-PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 318 IFQACSAISDLVYGAQVH-ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKP 376
+ + L G + A+ K L +A A +
Sbjct: 624 LLKG------LCKGGHLREAEKFLKSL---------------------HAVPAAV----- 651
Query: 377 DTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQ-- 433
DT+ + ++ A G ++AV LF +M++ + P++ T+ L+ SGL ++GK
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI-----SGLCRKGKTVI 706
Query: 434 ---FLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL---EMIRSMPFEPDTLSWKTLL 487
F + V P Y C + +AG + + E + ++ PD ++ ++
Sbjct: 707 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 488 GG 489
G
Sbjct: 767 DG 768
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 150/354 (42%), Gaps = 14/354 (3%)
Query: 201 KMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
+M+K + D F+I++ A + K G + ++ +Y K G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 261 RFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
RF+AA + + ++ + + +++ +I C+S R K +++R + + N Y
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 317 NIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE-- 374
+ S ++ +Q+ + + GL +A+I + G A + F +E
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 375 --KPDTIAWTAIICAYAYHGKSEAVKLFH-KMLRSGVRPNAVTFIGLLNACSHSGLVKEG 431
P +++ ++ + + + + F+ +M R+GV +T+ G+++ +G + E
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 432 KQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWKTLLG 488
L+ MS K G+DP I Y+ +I + + G + A E+ I + P+ + + TL+
Sbjct: 463 VVLLNEMS-KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 489 GCWSHRNLETA-SIAAGKIFHLDPLDSATYVTMFNLHALAGNWDEAAQYRKMMA 541
C L+ A I I D T+ + AG EA ++ + M
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 176/463 (38%), Gaps = 57/463 (12%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N +L C + A +F EMV R D +++ ++IS +G + AI LF++ +
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAE 715
Query: 104 L--GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWL 161
+ P+ ++ + + G Q+ +G T D+ + + Y + G +
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 162 DGAEVATNKMTTKNA----VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFV-FSI 216
+ +M +N L+ GY++ + + LL+ +I G+ D+ S+
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 217 VLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPN 276
VL C + + G +I + G+E + L+ SKC AF+ ++
Sbjct: 836 VLGICES-NMLEIGLKILKAFICRGVEVDRYTFNMLI---SKCCANGEINWAFDLVKVMT 891
Query: 277 DFSWS-------AIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
S A+++ ++ RF ++ + +G+ S Y + + D+
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 330 YGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYA 389
V + I + ESAM+ +KCGK D
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD------------------------- 986
Query: 390 YHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
EA L ML+ + P +F L++ C +G V E + MS G+ +
Sbjct: 987 -----EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS-NCGLKLDLV 1040
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGG 489
YN +I G + A E+ M F + ++K L+ G
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/512 (17%), Positives = 194/512 (37%), Gaps = 29/512 (5%)
Query: 13 YKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMV 71
Y L C +G L + +++ + + F N ++ C AE M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 72 DRDLF----SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALE 127
+ S+ +I+ Y G + A +F M +G P+ + +LL L
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 128 LGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK----NAVACTGLM 183
++ L + D + TL K G L A +M + ++ T L+
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 184 VGYTQALRHTDALLLFAKMI--KEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLG 241
G + + A+L FAK + V ++ +++ + G LG
Sbjct: 696 SGLCRKGKTVIAIL-FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 242 LESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKAL 297
++ ++D YS+ G+ E + PN +++ ++ GY + +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 298 ETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
+++I G++ + ++ + L G ++ I +G+ + +I+
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
Query: 358 SKCGKLDYAYQAF-------LTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRP 410
G++++A+ ++++K A +++ H E+ + H+M + G+ P
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL--NRNHRFQESRMVLHEMSKQGISP 932
Query: 411 NAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM 470
+ +IGL+N G +K + M + + + P + M+ ++ G EA +
Sbjct: 933 ESRKYIGLINGLCRVGDIKTAFVVKEEM-IAHKICPPNVAESAMVRALAKCGKADEATLL 991
Query: 471 IR---SMPFEPDTLSWKTLLGGCWSHRNLETA 499
+R M P S+ TL+ C + N+ A
Sbjct: 992 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 1023
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/508 (21%), Positives = 205/508 (40%), Gaps = 18/508 (3%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
++ +RV D V +LF + +I + + A LF RM +G++P+ + L+
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE----VATNKMTT 173
F L+ +++ G V +L N + K G + AE NK
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
V T LM GY + AL L+ +M +G+ + F+ +L I ++
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 234 HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQ 289
+ + ++ +++ Y + G A + + + E P+ +S+ +I G C
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 290 SGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSG 349
+G+ +A + LN YT + L V + +++G+ L
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 350 ESAMI--TMYSKCGKLDYAYQAFLTIE--KPDTIAWTAIICAYAYHGK-SEAVKLFHKML 404
+I ++ K KL + + KPD + +T++I A + G EA ++ M+
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 405 RSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGL- 463
G PN VT+ ++N +G V E + M V P Y C + + ++ +
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTKGEVD 768
Query: 464 LQEALEMIRSM--PFEPDTLSWKTLLGG-CWSHRNLETASIAAGKIFHLDPLDSATYVTM 520
+Q+A+E+ ++ +T ++ L+ G C R E + + I D TY TM
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 521 FNLHALAGNWDEAAQYRKMMAERNLRKE 548
N + +A + M E+ +R +
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 206/515 (40%), Gaps = 52/515 (10%)
Query: 50 ILQMYCDCKSFTAAERVFDEMVDR-----DLFSWATIISAYAEEGHMIGAIRLFSRMLDL 104
++Q Y + VF M+ + ++ + + ++ + H A+ LF+ M+ +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
GI+P I+ ++ S + L K++ + + G ++ L + K + A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 165 -----EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
++A + CT L+ G + L + +M+ E S +++
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCT-LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----P 275
I + V G+ + V L+D K +F A F+ + + P
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
ND ++S +I +C+ G+ D AL + G+ L+ + Y ++ D+
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-S 394
A+ I K L +P + +T+++ Y GK +
Sbjct: 461 AEMINKKL-------------------------------EPTVVTYTSLMGGYCSKGKIN 489
Query: 395 EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCM 454
+A++L+H+M G+ P+ TF LL+ +GL+++ + + M+ ++ V P YN M
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVM 548
Query: 455 IGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGG-CWSHRNLETASIAAGKIFHLD 510
I Y G + +A E ++ M + PDT S++ L+ G C + + E G
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 511 PLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
L+ Y + + G +EA + M +R +
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 224/532 (42%), Gaps = 38/532 (7%)
Query: 43 NKFIDNCILQMYCDCKSFTAAERVFDEMVDRDL----FSWATIISAYAEEGHMIGAIRLF 98
N F+ N ++ C + F AE +FD M L +++ +I + G + A+
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 99 SRMLDLGIKPSSSIFCTLLG---SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMY 155
M+D G+K S + +L+ F D SA E +++I V T+L Y
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAE---GFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 156 IKCGWLDGAEVATNKMTTKNAVAC----TGLMVGYTQALRHTDALLLFAKMIKEGVKLDE 211
G ++ A ++MT K T L+ G +A DA+ LF +M + VK +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 212 FVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFES 271
++++++ D++ + + G+ + PL+ G+ A +
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 272 IR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISD 327
+ E N+ ++ ++ G+C+ G+ ++AL + + +GV L+ Y + D
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 328 --LVYG--AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF-LTIEK---PDTI 379
L +G ++H +K V Y ++MI SK G A+ + L I + P+ +
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIY----TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 380 AWTAIICAYAYHG-KSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
+TA+I G +EA L KM PN VT+ L+ + G V K
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT-KGEVDMQKAVELHN 777
Query: 439 SVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PFEPDTLSWKTLLGGCWSHRN 495
++ G+ YN +I + R G ++EA E+I M PD +++ T++ +
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 496 LETASIAAGKIFH--LDPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
++ A + + P D Y T+ + +AG +A + R M + L
Sbjct: 838 VKKAIELWNSMTEKGIRP-DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 174/420 (41%), Gaps = 66/420 (15%)
Query: 54 YCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPS 109
YC A R++ EM + ++++ T++S G + A++LF+ M + +KP+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 110 SSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATN 169
+ ++ + + + + ++ G D L + G A+V +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 170 KMTTKNA----VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALK 225
+ N + TGL+ G+ + + +AL + +M++ GV LD + +++ K
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 226 D----INTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFE-SIRE---PND 277
D +++H GL+ + + T ++D SK G F+ A ++ I E PN+
Sbjct: 662 DRKLFFGLLKEMHDR----GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 278 FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACS-AISDLVYGAQVHA 336
+++A+I G C++G ++A ++ + N Y + D+ ++H
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH- 776
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFL------------------------- 371
+AI KGL+ + + +I + + G+++ A +
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 372 ----TIE----------KPDTIAWTAII---CAYAYHGKSEAVKLFHKMLRSGVRPNAVT 414
IE +PD +A+ +I C GK A +L ++MLR G+ PN T
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK--ATELRNEMLRQGLIPNNKT 894
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 129/325 (39%), Gaps = 13/325 (4%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQR-MANGNKFIDNCILQMYCDCKS 59
M E I D SY+ L + G S+ K+F + L + N+ +L +C
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
A V EMV R DL + +I + L M D G+KP I+ +
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM---- 171
++ + + + + +I G + T + N K G+++ AEV +KM
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 172 TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
+ N V + T+ + I +G+ + ++++++ I
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGY 287
++ + + G+ + T +++ + + A + + S+ E P+ +++ +I G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 288 CQSGRFDKALETFKNIRSKGVILNS 312
C +G KA E + +G+I N+
Sbjct: 868 CVAGEMGKATELRNEMLRQGLIPNN 892
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 211/511 (41%), Gaps = 66/511 (12%)
Query: 48 NCILQMYC-DCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRML 102
N +L C +C+ A E V D MV+ L + T+++ G + A+ L RM+
Sbjct: 162 NTLLNGLCLECRVSEALELV-DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
+ G +P+ + +L L +L ++ D + + + K G LD
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 163 GAEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVL 218
A N+M K + + L+ G+ A R D L MIK + + FS+++
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 219 KACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----E 274
+ + Q+ ++ G+ L+D + K R E A Q + + +
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 275 PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV 334
P+ +++ +I GYC++ R D LE F+ + +GVI N+ Y + Q
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG------------- 447
Query: 335 HADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI----EKPDTIAWTAIICAYAY 390
+ + GKL+ A + F + +PD +++ ++
Sbjct: 448 ----------------------FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 391 HGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTID 449
+G+ E A+++F K+ +S + + ++ +++ ++ V + S+ +K GV
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK-GVKLDAR 544
Query: 450 HYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKI 506
YN MI R L +A + R M E PD L++ L+ +H + A+ AA I
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI---RAHLGDDDATTAAELI 601
Query: 507 FHLD----PLDSATYVTMFNLHALAGNWDEA 533
+ P D +T + N+ + +G D++
Sbjct: 602 EEMKSSGFPADVSTVKMVINMLS-SGELDKS 631
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 16/268 (5%)
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
D A++ F+++ + + +F A + + KG+ + S M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 354 ITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGV 408
I + +C KL YA+ I K PDT+ + ++ + SEA++L +M+ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 409 RPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL 468
+P +T L+N +G V + +D M V+ G P Y ++ V ++G A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRM-VETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 469 EMIRSMP---FEPDTLSWKTLLGGCWSHRNLETA----SIAAGKIFHLDPLDSATYVTMF 521
E++R M + D + + ++ G +L+ A + K F D + TY T+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII---TYNTLI 305
Query: 522 NLHALAGNWDEAAQYRKMMAERNLRKEV 549
AG WD+ A+ + M +R + V
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNV 333
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 158/381 (41%), Gaps = 41/381 (10%)
Query: 178 ACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYS 237
+C GL+ + + + D F MI G + F ++I++ D+ R +
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 238 VKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EPNDFSWSAIITGYCQSGRF 293
GL + ++D + K GR + FE ++ EP+ +++A+I +C+ G+
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348
Query: 294 DKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAM 353
LE ++ ++ G+ N Y+ + A + + + D + GLV
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV--------- 399
Query: 354 ITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNA 412
P+ +T++I A G S+A +L ++ML+ GV N
Sbjct: 400 ----------------------PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
VT+ L++ + +KE ++ M GV P + YN +I + +A + ALE++
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 473 SMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD-PLDSATYVTMFNLHALAG 528
+ +PD L + T + G S +E A + ++ +S Y T+ + + +G
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 529 NWDEAAQYRKMMAERNLRKEV 549
N E M E ++ V
Sbjct: 557 NPTEGLHLLDEMKELDIEVTV 577
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/455 (19%), Positives = 179/455 (39%), Gaps = 85/455 (18%)
Query: 67 FDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFAD 122
F+EM D D+ ++ +I+ + + G + + + M G+KP+ + TL+ +F
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 123 PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM----TTKNAVA 178
++ + + + R+G + T+L + K G L A N+M N V
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 179 CTGLMVGYTQALRHTDALLLFAKM-------------------IK--------------- 204
T L+ G A R +A LF KM +K
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 205 -EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFE 263
G+K D ++ + +L+ I + + + + G+++ + T L+D Y K G
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 264 AACQAFESIREPN----DFSWSAIITGYCQSGRFDKALETFKNIRSK-GVILNSFVYTNI 318
+ ++E + ++ +I G C++ KA++ F I + G+ N+ ++T +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 319 FQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDT 378
+ + + ++KGLV PD
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLV-------------------------------PDR 648
Query: 379 IAWTAIICAYAYHGKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDS 437
A+T+++ G EA+ L KM G++ + + + L+ SH +++ + FL+
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 438 MSVKYGVDPTIDHYNCM--IGVYSRAGLLQEALEM 470
M + G+ P D C+ + + G + EA+E+
Sbjct: 709 M-IGEGIHP--DEVLCISVLKKHYELGCIDEAVEL 740
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 136/347 (39%), Gaps = 50/347 (14%)
Query: 12 SYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM 70
+Y L +G LSD +L + LQ N ++ CD + AE +F +M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 71 ----VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSAL 126
V +L S+ +I + + +M A+ L + + GIKP ++ T + +
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 127 ELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGY 186
E K + +++ G A+ I TTL + Y K G
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG--------------------------- 556
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQ-IHSYSVKLGLESE 245
T+ L L +M + +++ F +++ K ++ + S GL++
Sbjct: 557 ----NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 246 VSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFK 301
++ T ++D K + EAA FE + + P+ ++++++ G + G +AL
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 302 NIRSKGVILNSFVYT---------NIFQACSAISDLVYGAQVHADAI 339
+ G+ L+ YT N Q + + + G +H D +
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Query: 23 LGALSDGKLFHNRLQRMA-NGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDL----FS 77
L + K+ N ++ N I ++ Y + T + DEM + D+ +
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 78 WATIISAYAEEGHMIGAIRLFSRML-DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQL 136
+ +I + + A+ F+R+ D G++ +++IF ++ + +E L Q+
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 137 IRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMT----TKNAVACTGLMVGYTQALRH 192
++ G D + T+L + K G + A +KM + +A T L+ G + +
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQL 699
Query: 193 TDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVK 239
A +MI EG+ DE + VLK L I+ ++ SY +K
Sbjct: 700 QKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 214/497 (43%), Gaps = 67/497 (13%)
Query: 54 YCDCKSFTAAER--VFDEM-VD---RDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK 107
YC CK AAE +FD M VD D + ++ Y ++ +M A+RL+ RM++ +
Sbjct: 245 YCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 108 PSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA--- 164
IF TL+ F L+ G+ + SQ+I+ G ++V + Y K G +D A
Sbjct: 305 LDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Query: 165 --EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
++ ++N T L+ G+ + A+ L +M+ G+ D + ++LK
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLP 424
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAF--ESIREPNDFS- 279
++ I ++ L++ + P++D G E ++ E R+ + +
Sbjct: 425 KCHELKYAMVI----LQSILDNGCGINPPVID---DLGNIEVKVESLLGEIARKDANLAA 477
Query: 280 --WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY-------------------TNI 318
+ + T C + AL + + + G F Y NI
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 319 FQACSAISDLVYGAQVHADAIKK----------------GLVQYLSGESAMITMYSKCGK 362
Q + D+ V + KK GL ++ S++I K G+
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 363 LDYAYQAFLTIE----KPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIG 417
+ A + F + +PD IA+ +I YA +G+ EA +L ++++ +RP++ T+
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 418 LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM--- 474
L++ G++++G Q+LD M ++ G+ P + Y +IG + + G + + + M
Sbjct: 658 LISGFVKMGMMEKGCQYLDKM-LEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 475 PFEPDTLSWKTLLGGCW 491
+ D +++ TLL G W
Sbjct: 717 DIKHDHIAYITLLSGLW 733
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 128/588 (21%), Positives = 234/588 (39%), Gaps = 89/588 (15%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGK-LFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M E +DP + L LG L G+ +F +++ N F + ++ YC +
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 60 FTAAERVF-----DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFC 114
A R+F E + R++ + +I + ++G M A+ L RMLD GI P +
Sbjct: 358 VDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Query: 115 TLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG----------- 163
LL L+ + ++ G + + L N+ +K L G
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAA 477
Query: 164 ---AEVATNKMTTKNAVA------------CTGLMVGYTQALR---HTDALLLFAKMIKE 205
A V T + +N +A CT L Y ++ + + A ++
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 206 GVKLDEFV-----FSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
+LD FV + IV+ D + I +LGL V++ + ++ K G
Sbjct: 538 IQELD-FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQG 596
Query: 261 RFEAACQAF----ESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
R A + F ES +P++ ++ +I Y ++GR D+A E + + + +SF YT
Sbjct: 597 RVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYT 656
Query: 317 NIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAF-LTIE- 374
+ + + G Q ++ GL + +A+I + K G +++ F L E
Sbjct: 657 VLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 375 --KPDTIAWTAIIC----AYAYHGKSEAV------KLFHKMLRS-------------GVR 409
K D IA+ ++ A A K + + KL +++R+ G +
Sbjct: 717 DIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSK 776
Query: 410 PNAVTFIG---------------LLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCM 454
A+ IG ++ +G + E L+SM K G+ P + Y +
Sbjct: 777 SFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQ-KEGIVPNLVTYTIL 835
Query: 455 IGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGG-CWSHRNLETASI 501
+ + AG ++ A+++ EPD + + TLL G C R L+ ++
Sbjct: 836 MKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALAL 883
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 176/442 (39%), Gaps = 46/442 (10%)
Query: 79 ATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIR 138
A + +A + + I A+ +M++LG P + +++ + +E L + +
Sbjct: 481 AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQE 540
Query: 139 IGFTADVSIETTLSNMYIKCGWLDGAEV---ATNKMTTKNAVACTGLMVG-YTQALRHTD 194
+ F DV + N K D A A ++ + VA ++G + R +
Sbjct: 541 LDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE 600
Query: 195 ALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVD 254
A FAKM++ G++ DE + I++ A I+ ++ VK L T L+
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Query: 255 FYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVIL 310
+ K G E CQ + + E PN ++A+I + + G F + F + +
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH 720
Query: 311 NSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKL---DYAY 367
+ Y + QV + K+ L+Q L ++++ S G +A
Sbjct: 721 DHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAM 780
Query: 368 QAFLTIEK---PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACS 423
+ ++K P+ II Y G+ EA M + G+ PN VT+ L+ +
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 424 HSGLVK------EG--------------------KQFLDSMSV-----KYGVDPTIDHYN 452
+G ++ EG K+ LD++++ K G++P D Y
Sbjct: 841 EAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYE 900
Query: 453 CMIGVYSRAGLLQEALEMIRSM 474
++ + L EA+++++ M
Sbjct: 901 KLLQCLCYSRLTMEAVKVVKDM 922
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 199/478 (41%), Gaps = 40/478 (8%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVD-------------------RDLFSWATIISAYAEE 88
N +++ +CDC + + F ++ D S A + Y E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 89 GHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIE 148
+ A+ LF +M+++G+ P F TL+ + L ++++ G DV
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 149 TTLSNMYIKCGWLDGAEVATNKM----TTKNAVACTGLMVGYTQALRHTDALLLFAKMIK 204
T+ N K G A +KM + V + ++ + H+DA LF++M++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 205 EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR-FE 263
+G+ + F ++ ++ + + +++ ++ + +V L+ K G+ FE
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 264 AACQAFESIRE---PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQ 320
A E + P+ +++++I G+C+ RFD A F + S V+ + I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIID 440
Query: 321 ACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----P 376
+ G Q+ + ++GLV + + +I + + L+ A F + P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 377 DTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFL 435
DTI ++ + + K EA++LF + S + + V + +++ V E
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 436 DSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGC 490
S+ + +GV+P + YN MI + + +A + M EPD ++ TL+ GC
Sbjct: 561 CSLPI-HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/456 (18%), Positives = 181/456 (39%), Gaps = 26/456 (5%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
+++S+ +I + + + ++ F ++ LG +P F TLL + L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
++ GF V+ L + ++ G T + L+ G R
Sbjct: 200 GYMVETGFLEAVA----LFDQMVEIGL------------TPVVITFNTLINGLCLEGRVL 243
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+A L KM+ +G+ +D + ++ + D + + S + ++ +V + + ++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 254 DFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
D K G A F + E PN F+++ +I G+C GR+ A +++ + +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
+ + + A L ++ + + + + ++MI + K + D A
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 370 FLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F + PD + + II Y + E ++L ++ R G+ N T+ L++ +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWKT 485
+ M + +GV P N ++ + L+EALE+ I+ + DT+++
Sbjct: 484 NAAQDLFQEM-ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 486 LLGG-CWSHRNLETASIAAGKIFHLDPLDSATYVTM 520
++ G C + E + H D TY M
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 163/401 (40%), Gaps = 52/401 (12%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGK-LFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M+E I D Y + G SD + LF L++ N F NC++ +C
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRML------------- 102
++ A+R+ +M++R D+ ++ +ISA +EG + A +L ML
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 103 ------------------DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD 144
DL P F T++ + ++ G QL ++ R G A+
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 145 VSIETTLSNMYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGYTQALRHTDALLLFA 200
+ TL + + + L+ A+ +M + + + C L+ G+ + + +AL LF
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 201 KMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
+ + LD ++I++ ++ + G+E +V ++ +
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 261 RFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYT 316
A F ++ EP++ +++ +I G ++G DK++E +RS G ++F
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Query: 317 NIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMY 357
+ +SD + I+ L ++GE++ I Y
Sbjct: 647 MAEEIICRVSD--------EEIIENYLRPKINGETSSIPRY 679
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 160/397 (40%), Gaps = 66/397 (16%)
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
AV C ++ + + R A+ L+ KM + L+ + F+I++K ++
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 236 YSVKLG----------------LESEVSVGTPLVDFYSKCGRFEAAC---QAFESIREPN 276
KLG LE +S L + + G EA Q E P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
+++ +I G C GR + +A + ++ +V G +H
Sbjct: 226 VITFNTLINGLCLEGR-------------------------VLEAAALVNKMV-GKGLHI 259
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII---CAYAYHGK 393
D + G + + M M L+ + T KPD + ++AII C +H
Sbjct: 260 DVVTYGTIV-----NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH-- 312
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
S+A LF +ML G+ PN T+ +++ G + ++ L M ++ ++P + +N
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFNA 371
Query: 454 MIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKIFHL- 509
+I + G L EA ++ M PDT+++ +++ G H + A +F L
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLM 427
Query: 510 -DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
P D T+ T+ +++ A DE Q + ++ R L
Sbjct: 428 ASP-DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 199/478 (41%), Gaps = 40/478 (8%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVD-------------------RDLFSWATIISAYAEE 88
N +++ +CDC + + F ++ D S A + Y E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 89 GHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIE 148
+ A+ LF +M+++G+ P F TL+ + L ++++ G DV
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 149 TTLSNMYIKCGWLDGAEVATNKM----TTKNAVACTGLMVGYTQALRHTDALLLFAKMIK 204
T+ N K G A +KM + V + ++ + H+DA LF++M++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 205 EGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR-FE 263
+G+ + F ++ ++ + + +++ ++ + +V L+ K G+ FE
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 264 AACQAFESIRE---PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQ 320
A E + P+ +++++I G+C+ RFD A F + S V+ + I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIID 440
Query: 321 ACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----P 376
+ G Q+ + ++GLV + + +I + + L+ A F + P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 377 DTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFL 435
DTI ++ + + K EA++LF + S + + V + +++ V E
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 436 DSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGC 490
S+ + +GV+P + YN MI + + +A + M EPD ++ TL+ GC
Sbjct: 561 CSLPI-HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/424 (18%), Positives = 172/424 (40%), Gaps = 25/424 (5%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
+++S+ +I + + + ++ F ++ LG +P F TLL + L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHT 193
++ GF V+ L + ++ G T + L+ G R
Sbjct: 200 GYMVETGFLEAVA----LFDQMVEIGL------------TPVVITFNTLINGLCLEGRVL 243
Query: 194 DALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLV 253
+A L KM+ +G+ +D + ++ + D + + S + ++ +V + + ++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 254 DFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVI 309
D K G A F + E PN F+++ +I G+C GR+ A +++ + +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 310 LNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
+ + + A L ++ + + + + ++MI + K + D A
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 370 FLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLV 428
F + PD + + II Y + E ++L ++ R G+ N T+ L++ +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 429 KEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEM---IRSMPFEPDTLSWKT 485
+ M + +GV P N ++ + L+EALE+ I+ + DT+++
Sbjct: 484 NAAQDLFQEM-ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 486 LLGG 489
++ G
Sbjct: 543 IIHG 546
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 147/357 (41%), Gaps = 44/357 (12%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGK-LFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M+E I D Y + G SD + LF L++ N F NC++ +C
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 60 FTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRML------------- 102
++ A+R+ +M++R D+ ++ +ISA +EG + A +L ML
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 103 ------------------DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTAD 144
DL P F T++ + ++ G QL ++ R G A+
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 145 VSIETTLSNMYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGYTQALRHTDALLLFA 200
+ TL + + + L+ A+ +M + + + C L+ G+ + + +AL LF
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 201 KMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCG 260
+ + LD ++I++ ++ + G+E +V ++ +
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 261 RFEAACQAFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
A F ++ EP++ +++ +I G ++G DK++E +RS G ++F
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 160/397 (40%), Gaps = 66/397 (16%)
Query: 176 AVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHS 235
AV C ++ + + R A+ L+ KM + L+ + F+I++K ++
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 236 YSVKLG----------------LESEVSVGTPLVDFYSKCGRFEAAC---QAFESIREPN 276
KLG LE +S L + + G EA Q E P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 277 DFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHA 336
+++ +I G C GR + +A + ++ +V G +H
Sbjct: 226 VITFNTLINGLCLEGR-------------------------VLEAAALVNKMV-GKGLHI 259
Query: 337 DAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAII---CAYAYHGK 393
D + G + + M M L+ + T KPD + ++AII C +H
Sbjct: 260 DVVTYGTIV-----NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH-- 312
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
S+A LF +ML G+ PN T+ +++ G + ++ L M ++ ++P + +N
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFNA 371
Query: 454 MIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGGCWSHRNLETASIAAGKIFHL- 509
+I + G L EA ++ M PDT+++ +++ G H + A +F L
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLM 427
Query: 510 -DPLDSATYVTMFNLHALAGNWDEAAQYRKMMAERNL 545
P D T+ T+ +++ A DE Q + ++ R L
Sbjct: 428 ASP-DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/532 (21%), Positives = 230/532 (43%), Gaps = 37/532 (6%)
Query: 50 ILQMYCDCKSFTAAERVF----------DEMVDRDLFSWATIISAYAEEGHMIGAIRLFS 99
+LQMY + F AE F D V +++ T+I Y + G + A F
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 322
Query: 100 RMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG 159
RML+ GI P++ F T++ + + L L + +++ D L +++ K
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNN 381
Query: 160 WLDGAEVATNKMT----TKNAVACTGLMVGYTQALRH--TDALLLFAKMIKEGVKLDEFV 213
++ A +M + V+ L+ Y ++RH +A L A+M + V++DE+
Sbjct: 382 DIERAGAYFKEMKDDGLKPDPVSYRTLL--YAFSIRHMVEEAEGLIAEMDDDNVEIDEYT 439
Query: 214 FSIVLKACAALKDINTG-RQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
S + + + + + V + SE +D Y + G A + F
Sbjct: 440 QSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN--IDAYGERGYLSEAERVFICC 497
Query: 273 REPND---FSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLV 329
+E N ++ +I Y S +KA E F+++ S GV + Y + Q ++ +D+
Sbjct: 498 QEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILAS-ADMP 556
Query: 330 YGAQVHADAIKK-GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAI 384
+ + + + +++ G V A+I+ + K G+L+ A + + + +PD + + +
Sbjct: 557 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 385 ICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM--SVK 441
I A+A G +A+ M +G+ N+V + L+ + G + E + + S
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 442 YGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFEPDTLSWKTLLGGCWSHRN--LETA 499
P + NCMI +YS ++++A + SM + + + C +N E A
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEA 736
Query: 500 SIAAGKIFHLDPL-DSATYVTMFNLHALAGNWDEAAQYRKMMAERNLRKEVS 550
+ A ++ + L D +Y ++ L AL G + EA + K M ++ + S
Sbjct: 737 TQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDS 788
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 51/296 (17%)
Query: 74 DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLH 133
D + +IS++ + G + A ++ M++ I+P ++ L+ +FAD ++
Sbjct: 574 DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYV 633
Query: 134 SQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKM------TTKNAVACTGLMVG-Y 186
+ G + I +L +Y K G+LD AE K+ T V + M+ Y
Sbjct: 634 EAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLY 693
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
++ A +F M + G + +EF F+++L C
Sbjct: 694 SERSMVRKAEAIFDSMKQRG-EANEFTFAMML--C------------------------- 725
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKN 302
Y K GRFE A Q + +RE + S+++++ + GRF +A+ETFK
Sbjct: 726 --------MYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKE 777
Query: 303 IRSKGVILNSFVY----TNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMI 354
+ S G+ + + T + + + + ++ IK+GL ++S S+++
Sbjct: 778 MVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLV 833
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 137/332 (41%), Gaps = 13/332 (3%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGKLFHNRLQRMANGNKFIDNCILQMYCDCKSF 60
MD+ + ID + L +M L + R N + + + Y +
Sbjct: 428 MDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYL 487
Query: 61 TAAERVF---DEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
+ AERVF E+ R + + +I AY A LF M+ G+ P + TL+
Sbjct: 488 SEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLV 547
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNA- 176
A G+ ++ G+ +D + + ++K G L+ AE +M N
Sbjct: 548 QILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE 607
Query: 177 --VACTGLMVGYTQALRHTDALLLFAKMIKE-GVKLDEFVFSIVLKACAALKDINTGRQI 233
V G+++ + + + + +KE G+ + +++ ++K + ++ I
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Query: 234 HS---YSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR---EPNDFSWSAIITGY 287
+ S +V +++ YS+ A F+S++ E N+F+++ ++ Y
Sbjct: 668 YRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMY 727
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIF 319
++GRF++A + K +R ++ + Y ++
Sbjct: 728 KKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 200/491 (40%), Gaps = 66/491 (13%)
Query: 97 LFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHS-----QLIRIGFTADVSIETTL 151
L+ M+ GIKP +S + TL+ ++ G ++H+ ++ +IG D +
Sbjct: 209 LWDEMIRKGIKPINSTYGTLIDVYSKG-----GLKVHALCWLGKMSKIGMQPDEVTTGIV 263
Query: 152 SNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVG----------YTQALRHTDALLLFAK 201
MY K AE K + A + + + Y ++ + +A F +
Sbjct: 264 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 323
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGR--QIHSY--SVKLGLESEVSVGTPLVDFYS 257
M++EG+ F+ ++ N G+ ++ S ++KL + L+ ++
Sbjct: 324 MLEEGIVPTTVTFNTMIHIYG-----NNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHT 378
Query: 258 KCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
K E A F+ +++ P+ S+ ++ + ++A + V ++ +
Sbjct: 379 KNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEY 438
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL----------SGESAMITMYSKCGKL 363
SA++ + V A+ ++K + G SA I Y + G L
Sbjct: 439 TQ-------SALTRMY----VEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYL 487
Query: 364 DYAYQAFL---TIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLL 419
A + F+ + K I + +I AY E A +LF M+ GV P+ T+ L+
Sbjct: 488 SEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLV 547
Query: 420 NACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM---PF 476
+ + + +G+ +L+ M V I Y +I + + G L A E+ + M
Sbjct: 548 QILASADMPHKGRCYLEKMRETGYVSDCIP-YCAVISSFVKLGQLNMAEEVYKEMVEYNI 606
Query: 477 EPDTLSWKTLLGGCWSHRNLETAS--IAAGKIFHLDPLDSATYVTMFNLHALAGNWDEA- 533
EPD + + L+ N++ A + A K + P +S Y ++ L+ G DEA
Sbjct: 607 EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI-PGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 534 AQYRKMMAERN 544
A YRK++ N
Sbjct: 666 AIYRKLLQSCN 676
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 127/276 (46%), Gaps = 20/276 (7%)
Query: 199 FAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSK 258
KM + G D + V+ + L +N +++ V+ +E +V V L++ ++
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 259 CGRFEAACQAFESIREP----NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFV 314
G + A E+++E N ++++I Y + G D+A ++ + N
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS---CNKTQ 679
Query: 315 YTNIFQACSAIS-----DLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA 369
Y +++ + I+ +V A+ D++K+ + M+ MY K G+ + A Q
Sbjct: 680 YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 370 FLTIEK----PDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSH 424
+ + D +++ +++ +A G+ EAV+ F +M+ SG++P+ TF L
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 425 SGLVKEGKQFLDSM---SVKYGVDPTIDHYNCMIGV 457
G+ K+ + ++ + +K G++ I + ++G+
Sbjct: 800 LGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGI 835
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 181/413 (43%), Gaps = 18/413 (4%)
Query: 105 GIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA 164
GIKP S F L+ + L + + G D TT+ YI+ G LDGA
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 165 EVATNKMT----TKNAVACTGLMVGYTQALRHTDALLLFAKMI-KEGVKLDEFVFSIVLK 219
+M + + V+ ++ G+ + R DAL +M ++G D++ F+ ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI--RE--P 275
+ +I ++ G + +V ++ K G + A + + + R+ P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N +++ +I+ C+ + ++A E + + SKG++ + + ++ Q + ++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAYAYH 391
+ KG + +I GKLD A +E I + +I +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 392 GKS-EAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDH 450
K+ EA ++F +M GV N+VT+ L++ S V++ Q +D M + G P
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPDKYT 542
Query: 451 YNCMIGVYSRAGLLQEALEMIRSMPF---EPDTLSWKTLLGGCWSHRNLETAS 500
YN ++ + R G +++A +++++M EPD +++ TL+ G +E AS
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/467 (18%), Positives = 185/467 (39%), Gaps = 29/467 (6%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDRDLF----SWATIISAYAEEGHMIGAIRLFSRMLD 103
N +++ C A + ++M L ++ T++ Y EEG + GA+R+ +M++
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
Query: 104 LGIKPSSSIFCTLLGSFAD----PSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCG 159
G S+ ++ F AL +++ +Q GF D TL N K G
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ---DGFFPDQYTFNTLVNGLCKAG 309
Query: 160 WLDGA----EVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFS 215
+ A +V + + ++ G + +A+ + +MI + ++
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 216 IVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR-- 273
++ + ++ G+ +V L+ A + FE +R
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 274 --EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYG 331
EP++F+++ +I C G+ D+AL K + G + Y + +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 332 AQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAY----QAFLTIEKPDTIAWTAIICA 387
++ + G+ + + +I K +++ A Q + +KPD + +++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 388 YAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDP 446
+ G +A + M +G P+ VT+ L++ +G V+ + L S+ +K G++
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK-GINL 608
Query: 447 TIDHYNCMIGVYSRAGLLQEALEMIRSM----PFEPDTLSWKTLLGG 489
T YN +I R EA+ + R M PD +S++ + G
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 120/298 (40%), Gaps = 12/298 (4%)
Query: 36 LQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRD----LFSWATIISAYAEEGHM 91
LQ + + + N ++ C A V D+M+ RD ++ T+IS +E +
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 92 IGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTL 151
A L + GI P F +L+ + +L ++ G D L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 152 SNMYIKCGWLDGAEVATNKMT----TKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGV 207
+ G LD A +M ++ + L+ G+ +A + +A +F +M GV
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 208 KLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQ 267
+ ++ ++ + + Q+ + G + + L+ + + G + A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 268 AFESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA 321
+++ EP+ ++ +I+G C++GR + A + ++I+ KG+ L Y + Q
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 168/412 (40%), Gaps = 56/412 (13%)
Query: 71 VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGK 130
V DL++ +++ + + A +M+ LG +P F +L+ F + +E
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 131 QLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTT----KNAVACTGLMVGY 186
+ +Q++ +G DV + TT+ + K G ++ A ++M + V T L+ G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 187 TQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEV 246
+ R DA L M K +K D F+ ++ A ++++ +++ + +
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 247 SVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKN 302
T L++ + G + A Q F + P+ +++++I G+C+ + D A++ F
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 303 IRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGK 362
+ KG+ N+ YT + Q + +V + + +G+ + + ++ GK
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 363 LDYAYQAFLTIEK-------PDTIAWTAIICAYAYHGKSE-------------------- 395
+ A F ++K P+ + ++ Y+GK E
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 396 ----------------AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEG 431
AV LF + GV+PN VT+ ++ SGL +EG
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI-----SGLFREG 509
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 205/500 (41%), Gaps = 78/500 (15%)
Query: 48 NCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
+ + ++Y D F RVFD MV + D S + A + + + +F RM+D
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
G+K + ++ +E K+L + G + T+ N Y+K G
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 164 AEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAA 223
E G + ++ K+GV ++ ++++++
Sbjct: 278 VE-------------------GVLKVMK------------KDGVVYNKVTYTLLMELSVK 306
Query: 224 LKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFS 279
++ ++ + G+ES+V V T L+ + + G + A F+ + E P+ ++
Sbjct: 307 NGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYT 366
Query: 280 WSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQA-CSAISDLVYGAQVHADA 338
+ A+I G C+ G A ++SKGV + V+ + C
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC---------------- 410
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVK 398
+KG+V E++MI Y + + F +TIA C EA +
Sbjct: 411 -RKGMVD----EASMI--YDVMEQKGFQADVFTC----NTIAS----CFNRLKRYDEAKQ 455
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVY 458
+M+ GV+ + V++ L++ G V+E K+ MS K GV P YN MI Y
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK-GVQPNAITYNVMIYAY 514
Query: 459 SRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLDPLD-- 513
+ G ++EA ++ +M +PD+ ++ +L+ G N++ A ++ L LD
Sbjct: 515 CKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQN 573
Query: 514 SATYVTMFNLHALAGNWDEA 533
S TY M + + AG DEA
Sbjct: 574 SVTYTVMISGLSKAGKSDEA 593
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 154/354 (43%), Gaps = 16/354 (4%)
Query: 48 NCILQMYCDCKSFTAAERVFDEM----VDRDLFSWATIISAYAEEGHMIGAIRLFSRMLD 103
N I+ Y + F+ E V M V + ++ ++ + G M A +LF M +
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 104 LGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDG 163
GI+ ++ +L+ ++ L +L G + L + K G +
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 164 AEVATNKMTTKNA----VACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLK 219
AE+ N+M +K V L+ GY + +A +++ M ++G + D F + +
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 220 ACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIR----EP 275
LK + +Q ++ G++ T L+D Y K G E A + F + +P
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 276 NDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
N +++ +I YC+ G+ +A + N+ + G+ +S+ YT++ ++ ++
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Query: 336 ADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKP----DTIAWTAII 385
++ KGL Q + MI+ SK GK D A+ + +++ D +TA+I
Sbjct: 563 SEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 185/436 (42%), Gaps = 64/436 (14%)
Query: 63 AERVFDEMVDR----DLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLG 118
A +F+ +++ L ++ T+++A + H + L S++ G+KP + +F ++
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 119 SFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE-----VATNKMTT 173
+ ++ L+ ++ ++ G S TL Y K G L+ + + ++M
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 174 KNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAAL------KDI 227
N C L+ + + +A + KM GVK D F+ + KA A + +D+
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 228 NTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGY 287
R +H+ VK PN + I+ GY
Sbjct: 518 IIPRMLHN-KVK-----------------------------------PNVRTCGTIVNGY 541
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQV----HADAIKKGL 343
C+ G+ ++AL F ++ GV N FV+ ++ + I+D+ +V +K +
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDV 601
Query: 344 VQYLSGESAMITMYSKCGKLDYAYQAFLTIEK----PDTIAWTAIICAYAYHGKSE-AVK 398
V + S ++ +S G + + + + + PD A++ + YA G+ E A +
Sbjct: 602 VTF----STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQ 657
Query: 399 LFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVY 458
+ ++M + GVRPN V + +++ +G +K+ Q M G+ P + Y +I +
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Query: 459 SRAGLLQEALEMIRSM 474
A +A E+++ M
Sbjct: 718 GEAKQPWKAEELLKDM 733
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 150/336 (44%), Gaps = 23/336 (6%)
Query: 22 MLGALSDGKLFHNRLQRMA----NGNK---FIDNCILQMYCDCKSFTAAERVFDEMVDRD 74
++ AL+ K FH+ L ++ NG K + N I+ + + A ++F++M +
Sbjct: 360 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 419
Query: 75 LFSWATIISAYAEEGHMIGAIRLFSRMLDLGIK-----PSSSIFCTLLGSFADPSALELG 129
A+ + + IG + SR+LD+ ++ P+ L+ ++ + +E
Sbjct: 420 CKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEA 479
Query: 130 KQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAE------VATNKMTTKNAVACTGLM 183
+ ++ G DV TL+ Y + G AE + NK+ N C ++
Sbjct: 480 WNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKP-NVRTCGTIV 538
Query: 184 VGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLE 243
GY + + +AL F +M + GV + FVF+ ++K + D++ ++ + G++
Sbjct: 539 NGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVK 598
Query: 244 SEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALET 299
+V + L++ +S G + + + + E P+ ++S + GY ++G +KA +
Sbjct: 599 PDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Query: 300 FKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVH 335
+R GV N +YT I + ++ QV+
Sbjct: 659 LNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVY 694
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 118/518 (22%), Positives = 205/518 (39%), Gaps = 82/518 (15%)
Query: 31 LFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEM----VDRDLFSWATIISAYA 86
+F+ L++ N I + ILQ YC +F+ A +F E + D + A
Sbjct: 348 VFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALG 407
Query: 87 EEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVS 146
+ G + AI LF M GI P + TL+G L ++ G T D+
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 147 IETTLS-------------------------------NMYIK----CGWLDGAEVATNKM 171
I L+ NM I+ G LD AE +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 172 TTKNAVACTGLMVGYTQA--LRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKD-IN 228
K+ ++ G+ A L H F + I+ L + V+ + + A KD I+
Sbjct: 528 EHKSRENDASMVKGFCAAGCLDHA-----FERFIRLEFPLPKSVYFTLFTSLCAEKDYIS 582
Query: 229 TGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDFSWSAII 284
+ + KLG+E E S+ L+ + + A + FE + P+ F+++ +I
Sbjct: 583 KAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMI 642
Query: 285 TGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIF------------QACSAISDLVY-- 330
YC+ +A F++++ + V + Y+ + +A I D+VY
Sbjct: 643 NTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYT 702
Query: 331 ---GAQVHADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE------KPDTI 379
H + +KK L + + + + + L + L+ E KPD
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVF 762
Query: 380 AWTAII---CAYAYHGKSEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLD 436
+T +I C G EA ++F +M+ SGV P+A + L+ C G +KE K D
Sbjct: 763 YYTVLIDWQCKIGDLG--EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 820
Query: 437 SMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSM 474
M ++ GV P + Y +I R G + +A+++++ M
Sbjct: 821 RM-IESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEM 857
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 111/293 (37%), Gaps = 50/293 (17%)
Query: 239 KLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI----REPNDFSWSAIITGYCQSGRFD 294
K G++ +V V + +++ + K A F + + N S+I+ YCQ G F
Sbjct: 319 KHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFS 378
Query: 295 KALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMI 354
+A + FK R + L+ Y F A + + ++ + KG+
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIA---------- 428
Query: 355 TMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAV 413
PD I +T +I GK S+A L +M +G P+ V
Sbjct: 429 ---------------------PDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 414 TFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRS 473
+ L + +GL +E + L M + GV PT +N +I AG L +A S
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENR-GVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Query: 474 MPFEPDTLSWKTLLG----GCWSHRNLETASIAAGKIFHLD-PLDSATYVTMF 521
+ + + G GC H A + L+ PL + Y T+F
Sbjct: 527 LEHKSRENDASMVKGFCAAGCLDH--------AFERFIRLEFPLPKSVYFTLF 571
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 98/251 (39%), Gaps = 9/251 (3%)
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
++ ++ G C R + A ++ G+ + +VY+ I + ++ V
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKP----DTIAWTAIICAYAYHGK- 393
+KK S+++ Y + G AY F + D + + A GK
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 394 SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNC 453
EA++LF +M G+ P+ + + L+ C G + + M G P I YN
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD-GTGKTPDIVIYNV 471
Query: 454 MIGVYSRAGLLQEALEMIRSMP---FEPDTLSWKTLLGGCWSHRNLETASIAAGKIFHLD 510
+ G + GL QEA E ++ M +P ++ ++ G L+ A + H
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 511 PLDSATYVTMF 521
+ A+ V F
Sbjct: 532 RENDASMVKGF 542
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 162/400 (40%), Gaps = 44/400 (11%)
Query: 97 LFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYI 156
+M+ LG +P F +LL + + +E L Q++ +GF +V TTL
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 157 KCGWLDGAEVATNKMTTK----NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEF 212
K L+ A N+M T N V L+ G + R DA L M+K ++ +
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 213 VFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESI 272
F+ ++ A + + +++++ +++ +
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVY----------------------------- 290
Query: 273 REPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGA 332
P+ F++ ++I G C G D+A + F + G N +YT + + G
Sbjct: 291 --PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 333 QVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIE----KPDTIAWTAIICAY 388
++ + +KG+V + +I Y G+ D A + F + PD + ++
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 389 AYHGKSE-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPT 447
+GK E A+ +F M + + N VT+ ++ G V++ S+ K G+ P
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPN 467
Query: 448 IDHYNCMIGVYSRAGLLQEALEMIRSMP---FEPDTLSWK 484
+ Y MI + R GL+ EA + + M F P+ +K
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 161/405 (39%), Gaps = 46/405 (11%)
Query: 49 CILQMYCDCKSFTAAE------RVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRML 102
C + M+C C S ++ + DL ++ ++++ Y + AI LF ++L
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 103 DLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLD 162
+G KP+ + TL+ L +L +Q+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM-------------------------- 214
Query: 163 GAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACA 222
TN + N V L+ G + R DA L M+K ++ + F+ ++ A
Sbjct: 215 ----GTNG-SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 223 ALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----PNDF 278
+ + +++++ +++ + +V L++ G + A Q F + PN+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 279 SWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADA 338
++ +I G+C+S R + ++ F + KGV+ N+ YT + Q + +V
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 339 IKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPD----TIAWTAIICAYAYHGKS 394
+ + + ++ GK++ A F + K + + +T II GK
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 395 E-AVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGKQFLDSM 438
E A LF + G++PN +T+ +++ GL+ E M
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 127/298 (42%), Gaps = 12/298 (4%)
Query: 30 KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDR----DLFSWATIISAY 85
+LF+ + N N ++ C+ + A + +M+ R ++ ++ +I A+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 86 AEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADV 145
+ G ++ A L++ M+ + + P + +L+ L+ +Q+ + R G +
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 146 SIETTLSNMYIKCGWL-DGAEV---ATNKMTTKNAVACTGLMVGYTQALRHTDALLLFAK 201
I TTL + + K + DG ++ + K N + T L+ GY R A +F +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 202 MIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGR 261
M D ++++L + I Y K ++ + T ++ K G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 262 FEAA----CQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVY 315
E A C F +PN +++ +I+G+C+ G +A FK ++ G + N VY
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 203/479 (42%), Gaps = 27/479 (5%)
Query: 37 QRMANGNKFIDNCILQMYCDCKSFTAAERVFDEMVDRDLFS----WATIISAYAEEGHMI 92
+R + N +++ YC AE VF+ + ++ L + + ++ Y G +
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 93 GAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLS 152
A+R+ M+++G++ +++I +L+ + L +Q+ S++ D TL
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 153 NMYIKCGWLDGAEVATNKMTTKNAVACTG----LMVGYTQALRHTDALLLFAKMIKEGVK 208
+ Y + G++D A ++M K V L+ GY++ D L L+ M+K GV
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 209 LDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQA 268
DE S +L+A L D N ++ + GL ++ ++ K + A +
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 269 FESIR----EPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSA 324
+++ +P ++ A+ GY + G +A + + KG+ +Y +
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 325 ISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQA-FLTIEKPDTIAWTA 383
L A + + +GL ++ A+IT + G +D AY F IEK I
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK--GITLNV 646
Query: 384 IICA------YAYHGKSEAVKLFHKMLR-SGVRPNAVTFIGLLNACSHSGL-VKEGKQFL 435
IC+ + EA L K++ + P + L A + + L ++ + +
Sbjct: 647 NICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV 706
Query: 436 DSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEAL----EMIRSMPFEPDTLSWKTLLGGC 490
++ + K + P YN I +AG L++A +++ S F PD ++ L+ GC
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGC 765
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/570 (20%), Positives = 220/570 (38%), Gaps = 83/570 (14%)
Query: 1 MDEACISIDPRSYKHLFKMCGMLGALSDGK-LFHNRLQRMANGNKFIDNCILQMYCDCKS 59
M E +S + +Y L K G + + + +F ++ ++ + ++ YC
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 60 FTAAERVFDEMVDRDLFSWATI----ISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCT 115
A RV D M++ + + TI I+ Y + G ++ A ++FSRM D +KP + T
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 116 LLGSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGA----EVATNKM 171
L+ + ++ +L Q+ + V L Y + G ++ +
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 172 TTKNAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGR 231
+ ++C+ L+ + +A+ L+ ++ G+ D ++++ ++ +N +
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 232 QIHSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIRE----------------- 274
+I + V L Y K G + A E +
Sbjct: 527 EILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGA 586
Query: 275 ----------------------PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNS 312
P ++ A+ITG+C G DKA T + KG+ LN
Sbjct: 587 FKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN- 645
Query: 313 FVYTNIFQACSAISDLVYGAQVHADAIKKG--LVQYLSGESAMITMYSKCGK-LDYAYQA 369
NI CS I++ ++ D I + L+Q + ++ Y + L+ +
Sbjct: 646 ---VNI---CSKIANSLF----RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATT 695
Query: 370 FLTIEK---------------PDTIAWTAIICAYAYHGKSE-AVKLFHKMLRSG-VRPNA 412
L +K P+ I + I GK E A KLF +L S P+
Sbjct: 696 CLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDE 755
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIR 472
T+ L++ C+ +G + + D M++K G+ P I YN +I + G + A ++
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALK-GIIPNIVTYNALIKGLCKLGNVDRAQRLLH 814
Query: 473 SMP---FEPDTLSWKTLLGGCWSHRNLETA 499
+P P+ +++ TL+ G N+ A
Sbjct: 815 KLPQKGITPNAITYNTLIDGLVKSGNVAEA 844
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/491 (18%), Positives = 193/491 (39%), Gaps = 91/491 (18%)
Query: 58 KSFTAAERVFDEMVDRDLFSWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
K F+ + VFD I+ YAE+G + A+ +F M + G PS +LL
Sbjct: 149 KEFSFSPTVFD-----------MILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLL 197
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEV----------- 166
+ + ++ Q+I + DV + + N Y + G +D A V
Sbjct: 198 SNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGL 257
Query: 167 -----------------------------ATNKMTTKNAVACTGLMVGYTQALRHTDALL 197
+ + ++N V T L+ GY + +A
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 198 LFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQIHSYSVKLGLESEVSVGTPLVDFYS 257
+F + ++ + D+ ++ +++ I ++H +++G+ + ++ L++ Y
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 258 KCGRFEAACQAFESIRE----PNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSF 313
K G+ A Q F + + P+ +++ ++ GYC++G D+AL+ + K V+
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
Query: 314 VYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESAMITMYSKCGKLDYAYQAFLTI 373
Y + + S I + +K+G+
Sbjct: 438 TYNILLKGYSRIGAFHDVLSLWKMMLKRGV------------------------------ 467
Query: 374 EKPDTIAWTAIICAYAYHGK-SEAVKLFHKMLRSGVRPNAVTFIGLLNACSHSGLVKEGK 432
D I+ + ++ A G +EA+KL+ +L G+ + +T +++ V E K
Sbjct: 468 -NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 433 QFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQEALEMIRSMPFE---PDTLSWKTLLGG 489
+ LD++++ + P + Y + Y + G L+EA + M + P + TL+ G
Sbjct: 527 EILDNVNI-FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 490 CWSHRNLETAS 500
+ +R+L +
Sbjct: 586 AFKYRHLNKVA 596
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/446 (19%), Positives = 165/446 (36%), Gaps = 74/446 (16%)
Query: 6 ISIDPRSYKHLFKMCGMLGALSDG-KLFHNRLQRMANGNKFIDNCILQMYCDCKSFTAAE 64
++ D S L + LG ++ KL+ N L R + N ++ C + A+
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 65 RVFDEMVDRDLF-------SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLL 117
+ D + ++F ++ + Y + G++ A + M GI P+ ++ TL+
Sbjct: 527 EILDNV---NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Query: 118 GSFADPSALELGKQLHSQLIRIGFTADVSIETTLSNMYIKCGWLDGAEVATNKMTTK--- 174
L L +L G T V+ L + G +D A +M K
Sbjct: 584 SGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGIT 643
Query: 175 -NAVACTGLMVGYTQALRHTDALLLFAKMIKEGVKLDEFVFSIVLKACAALKDINTGRQI 233
N C+ + + + +A LL K++ F ++L +LK+
Sbjct: 644 LNVNICSKIANSLFRLDKIDEACLLLQKIVD---------FDLLLPGYQSLKEFLEASAT 694
Query: 234 HSYSVKLGLESEVSVGTPLVDFYSKCGRFEAACQAFESIREPNDFSWSAIITGYCQSGRF 293
+ ES V TP + + PN+ ++ I G C++G+
Sbjct: 695 TCLKTQKIAES-VENSTP------------------KKLLVPNNIVYNVAIAGLCKAGKL 735
Query: 294 DKALETFKNI-RSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYLSGESA 352
+ A + F ++ S I + + YT + C+ D+ + + KG++ + +A
Sbjct: 736 EDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNA 795
Query: 353 MITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSEAVKLFHKMLRSGVRPNA 412
+I K G +D A +L HK+ + G+ PNA
Sbjct: 796 LIKGLCKLGNVD------------------------------RAQRLLHKLPQKGITPNA 825
Query: 413 VTFIGLLNACSHSGLVKEGKQFLDSM 438
+T+ L++ SG V E + + M
Sbjct: 826 ITYNTLIDGLVKSGNVAEAMRLKEKM 851
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 3/210 (1%)
Query: 288 CQSGRFDKALETFKNIRSKGVILNSFVYTNIFQACSAISDLVYGAQVHADAIKKGLVQYL 347
C+ G+ KA+E K+ R++G +++ I Q C L VH + +
Sbjct: 157 CREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDI 216
Query: 348 SGESAMITMYSKCGKLDYAYQAFLTIEKPDTIAWTAIICAYAYHGKSE-AVKLFHKMLRS 406
S +++I MYS CG ++ A F ++ + + W +I +A +G+ E A+ F + +
Sbjct: 217 SAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQE 276
Query: 407 GVRPNAVTFIGLLNACSHSGLVKEGKQFLDSMSVKYGVDPTIDHYNCMIGVYSRAGLLQE 466
G +P+ F + AC G + EG +SM +YG+ P ++HY ++ + + G L E
Sbjct: 277 GNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDE 336
Query: 467 ALEMIRSMPFEPDTLSWKTLLGGCWSHRNL 496
AL + SM EP+ W+TL+ H +L
Sbjct: 337 ALRFVESM--EPNVDLWETLMNLSRVHGDL 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 204 KEGVKLDEFVFSIVLKACAALKDINTGRQIHSY-SVKLGLESEVSVGTPLVDFYSKCGRF 262
EG +D + + C + + + +H + + +G+ S++S +++ YS CG
Sbjct: 174 NEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGI-SDISAYNSIIEMYSGCGSV 232
Query: 263 EAACQAFESIREPNDFSWSAIITGYCQSGRFDKALETFKNIRSKGVILNSFVYTNIFQAC 322
E A F S+ E N +W +I + ++G+ + A++TF + +G + ++ IF AC
Sbjct: 233 EDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFAC 292
Query: 323 SAISDLVYGAQVHADAIKK--GLVQYLSGESAMITMYSKCGKLDYAYQAFLTIEKPDTIA 380
+ D+ G +H +++ K G++ + +++ M ++ G LD A + F+ +P+
Sbjct: 293 GVLGDMNEGL-LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR-FVESMEPNVDL 350
Query: 381 WTAIICAYAYHG 392
W ++ HG
Sbjct: 351 WETLMNLSRVHG 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 81 IISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIFCTLLGSFADPSALELGKQLHSQLIRIG 140
II ++ EG+++ RLF L G D AL+ K +H +
Sbjct: 168 IIKSWRNEGYVVDLPRLF-------------WIAQLCG---DAQALQEAKVVHEFITSSV 211
Query: 141 FTADVSIETTLSNMYIKCGWLDGAEVATNKMTTKNAVACTGLMVGYTQALRHTDALLLFA 200
+D+S ++ MY CG ++ A N M +N G++ + + + DA+ F+
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271
Query: 201 KMIKEGVKLDEFVFSIVLKACAALKDINTG-----RQIHSYSVKLGLESEVSVGTPLVDF 255
+ +EG K D +F + AC L D+N G Y + +E VS LV
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVS----LVKM 327
Query: 256 YSKCGRFEAACQAFESIREPNDFSWSAIIT 285
++ G + A + ES+ EPN W ++
Sbjct: 328 LAEPGYLDEALRFVESM-EPNVDLWETLMN 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 18 KMCGMLGALSDGKLFHNRLQRMANGNKFID-NCILQMYCDCKSFTAAERVFDEMVDRDLF 76
++CG AL + K+ H + + N I++MY C S A VF+ M +R+L
Sbjct: 189 QLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLE 248
Query: 77 SWATIISAYAEEGHMIGAIRLFSRMLDLGIKPSSSIF------CTLLGSFAD 122
+W +I +A+ G AI FSR G KP +F C +LG +
Sbjct: 249 TWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNE 300