Miyakogusa Predicted Gene
- Lj1g3v0116680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0116680.1 Non Chatacterized Hit- tr|I1LFW6|I1LFW6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48213
PE,62.77,0,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; seg,NULL;
no description,Zinc finger, RING/FYVE/PHD,CUFF.25827.1
(1485 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16680.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 393 e-109
AT3G02890.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 366 e-101
AT1G43770.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 105 2e-22
AT4G17850.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 70 9e-12
AT5G61100.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 62 2e-09
AT1G43770.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 57 1e-07
>AT5G16680.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:5467534-5472956 REVERSE LENGTH=1311
Length = 1311
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 283/746 (37%), Positives = 402/746 (53%), Gaps = 75/746 (10%)
Query: 326 KVCDICGDAGREDLLAICCRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEETEKKKLD 385
KVCDICGDAGREDLLAIC CSDGAEHTYCMREML++VPEGDWLCE + AEE EK+K +
Sbjct: 284 KVCDICGDAGREDLLAICSGCSDGAEHTYCMREMLDEVPEGDWLCE--ECAEEAEKQKQE 341
Query: 386 VEGKKISKVCSTSQVSGKRLLDNIELVAPPATKRQAIELSAGSPKTSSPKKLVPLSREPS 445
+ K+ ++V + SGKR D IE A P KRQ +E S GSPK S ++ LSRE S
Sbjct: 342 AKRKRETEVTFNTYSSGKRHADKIE--AAPDAKRQVVEASTGSPKKSILPRVGALSRETS 399
Query: 446 FKSSDKLKPKLGHLMPIRNHSGADDAAITRSPSIVPRGQXXXXXXXXXXXXXXXXXXXRV 505
FK D+L+ KL H S +DD RS + Q +V
Sbjct: 400 FKGLDRLRGKLNHQT-----SFSDDTESARSAG--SQLQPPKGAFLKSSSFNCSSSKPKV 452
Query: 506 KLVDEVIPPKTKGINEHTSKNGEMPT-RMXXXXXXXXXXXXGRSSSTESKVKTPLPKSAT 564
+L+D+ I P+ K E T+ + ++ R G S ++S+ K K
Sbjct: 453 QLMDDAIHPRQKTGKEDTALDLKVGGFRNVGKSMPSRTTDAGNSGGSDSQAKMLGSKVYH 512
Query: 565 AQELKGSRQLKESGAFERKFLSRTDRPVASSVSTTKGEKLTPRGETTNPSAVNNNRELR- 623
+QE K +Q+K+ +R ASS+ +KL RG ++ S NNNR+L+
Sbjct: 513 SQEGKSLKQVKDR--------NREANASASSID----QKLKSRGNSS-VSHANNNRDLKG 559
Query: 624 VNQDGRKSALSKSMSNLSRRSLDPQV---------------------------------S 650
+ DG++ L+K +SNLSR L+ V +
Sbjct: 560 LQSDGKRGNLTKQVSNLSRNRLENSVVSGGDISTNEKCSASEQSSSQADCKDELPSTSCT 619
Query: 651 AERTSPSVDEALQNVLPRSRETANQVEKTRNSYNDRVRPAVPAASKSLLCKKCKEVGHSL 710
E ALQ+ LPRSR +K++ +++ R R ++ A +K L ++ G
Sbjct: 620 GEGMPNHGTVALQDGLPRSRVPREVGKKSKEAFSKRQRSSLLAGAKGL--PSSQKGGQ-- 675
Query: 711 ECCTAGTTQESGAEKS-VTASSSLKEEMHKGNGLKAAIQAALRRRPEIYKKKEVPNQTDE 769
TA ++ SG S ++ + ++KE+++KGN L+AA+ AALR++P + K V Q+D
Sbjct: 676 ---TAESSDTSGVSDSDLSTTKNVKEDLNKGNRLRAAVDAALRKKPS-FGKNRVLEQSDA 731
Query: 770 VSTSGRELNCEVTLQDQVLVSRSPKNSISAEETREQLEILEXXXXXXXXXXXANDLKQLK 829
+ + + E TL++Q L S+ KN +S E + IL N+ KQL
Sbjct: 732 SLVANVDSSSEKTLRNQ-LPSKMHKNHVSHEGLQGGHPILWPTSDPYKQTIVTNE-KQLI 789
Query: 830 SCPSDLCTEIGKSDFIGLTAGKSSVRDLSDKDMATSSVLSKTLAFPEYQYIWQGVFEVHR 889
+D + A K +RDL + S V+ ++ A P++++IWQG EV +
Sbjct: 790 FPGADTIPSRLVEPEVSFPAVKPVMRDLP---LVPSPVMLRSSAIPDHEFIWQGDLEVRK 846
Query: 890 NEKPPDLCTGVQAHLSSCASPKVLEVVTKFLPKVSLSEVSRLSTWPSQFHHGGVSEDNIA 949
+ +G+QAHLS+ ASP+V EVV KF SL+EV R STWP+QF G E +IA
Sbjct: 847 IINQSAMHSGIQAHLSTLASPRVAEVVNKFPETFSLNEVPRKSTWPTQFEKLGTKEAHIA 906
Query: 950 LYFFARDVESYERHYKGLLDHMARNDLALKGLFDGVELLIFPSNQLPENSQRWNMLFFLW 1009
L+FFA+D ESYER+YK L+D+M +NDLALKG D V+LLIF SNQLP N QRWNML+FLW
Sbjct: 907 LFFFAKDTESYERNYKPLVDNMIKNDLALKGNLDNVDLLIFASNQLPSNCQRWNMLYFLW 966
Query: 1010 GVFRGRQINHSDSAKKICIPSLNAMP 1035
GVF+GR+ ++ K +P+ N +P
Sbjct: 967 GVFQGRK--ETNPQKNTSLPTSNVLP 990
>AT3G02890.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:640828-645303 FORWARD LENGTH=994
Length = 994
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 266/727 (36%), Positives = 377/727 (51%), Gaps = 111/727 (15%)
Query: 326 KVCDICGDAGREDLLAICCRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEETEKKKLD 385
KVCD CGDAGREDLLAIC RCSDGAEHTYCMR ML+KVP+G WLCEECK AE+ EK KL+
Sbjct: 213 KVCDTCGDAGREDLLAICSRCSDGAEHTYCMRVMLKKVPKGYWLCEECKFAEKAEKHKLE 272
Query: 386 VEGKKISKVCSTSQVSGKRLLDNIELVAPPATKRQAIELSAGSPKTSSPKKLVPLSREPS 445
+ K+ S+V +Q+S KR +D E V P +KR A+ GSPK S ++ LSRE S
Sbjct: 273 TKRKRESEVNVNTQISSKRHIDKFEAV--PDSKRLAVGAQIGSPKRSVLPRMSTLSRETS 330
Query: 446 FKSSDKLKPKLGHLMPIRNHSGADDAAITRSPSIVPRGQXXXXXXXXXXXXXXXXXXXRV 505
FK +K KL H +HS +DD TRS + Q +V
Sbjct: 331 FKGLEKPTRKLAHYSSFNSHS-SDDTESTRSTD--SQLQSPKGSFLKSNSFNSLSSRSKV 387
Query: 506 KLVDEVIPPKTKGINEHTS-KNGEMPTRMXXXXXXXXXXXXGRSSSTESKVKTPLPKSAT 564
+ VD+ + P+ K NE++S + E ++ G S+ +SKVK
Sbjct: 388 RPVDDDMLPRQKTGNENSSLEVKEGFSKNVGKSMSSRCIDVGSSNCNDSKVK-------- 439
Query: 565 AQELKGSRQLKESGAFERKFLSRTDRPVASSVSTTKGEKLTPRGETTNPSAVNNNRELR- 623
GS+QLK+ S P AS RG ++ P A + R+L+
Sbjct: 440 -----GSKQLKD--------WSTEANPSAS----------ISRGNSSIPYA-KSPRDLKD 475
Query: 624 VNQDGRKSALSKSMSNLSRRSLDPQV-------------SAERTSPSV---DEALQ-NVL 666
+ DG++ +LSK +LSR L+ V S+E+ S DE Q + +
Sbjct: 476 LQSDGKQGSLSKQARHLSRNRLEDIVASVGDSSKNEKCSSSEQISSEAKCKDELAQVDGV 535
Query: 667 PRSRETANQVEKTRNSYNDRVRPAVPAASKSLLCKKCKEVGHSLECCTAGTTQESGAEKS 726
PRSRE EKT+++ + + + +G
Sbjct: 536 PRSREFREAGEKTKDAVGNHQK---------------RNIG------------------- 561
Query: 727 VTASSSLKEEMHKGNGLKAAIQAALRRRPEIYKKKEVPNQTDEVSTSGRELNCEVTLQDQ 786
E+ +KGN L+AA+ AALR++P K + + Q+D S + C L+
Sbjct: 562 --------EDNNKGNRLRAAVDAALRKKPSFSKNRGL-EQSDLPPVSNVDSGCNKALK-- 610
Query: 787 VLVSRSPKNSISAEETREQLEILEXXXXXXXXXXXANDL--KQLKSCPSDLCTEIGKSD- 843
L S+ P + + L N + KQ +D T +
Sbjct: 611 CLSSKVP----VIRDWPVGFQGLPGGHPNLRTDKQTNTVNEKQFTLAGTDATTASQSVEP 666
Query: 844 FIGLTAGKSSVRDLSDKDMATSSVLSKTLAFPEYQYIWQGVFEVHRNEKPPDLCTGVQAH 903
+ + +S +RDL +A +VLS T A P+ +YIWQG EV ++ + +G+QA+
Sbjct: 667 EVNDPSVQSVMRDLP---VAAPNVLSTTSAIPKPEYIWQGDLEVQKSRNLSAMHSGIQAY 723
Query: 904 LSSCASPKVLEVVTKFLPKVSLSEVSRLSTWPSQFHHGGVSEDNIALYFFARDVESYERH 963
LS+ ASPKV+EVV +F KV+L+EV RLS+WP+QF G E ++AL+FFA+D+ESYE++
Sbjct: 724 LSTLASPKVVEVVKQFPEKVTLNEVPRLSSWPAQFQDTGAKEQHVALFFFAKDIESYEKN 783
Query: 964 YKGLLDHMARNDLALKGLFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRQINHSDSA 1023
YK L+D+M + DLALKG +GVELLIF SNQLP++ QRWNMLFFLWGVFRG++ + S+
Sbjct: 784 YKPLVDNMIQKDLALKGNLEGVELLIFASNQLPQDCQRWNMLFFLWGVFRGKKESCSNPP 843
Query: 1024 KKICIPS 1030
K +P+
Sbjct: 844 KNTPLPA 850
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 7 MRLESGNCNVCSAPCSSCMHLNRALMGSKAEEFSDENCRSGEANNQYSVNEDNVSSSLGS 66
+ ++SG CNVCSAPCSSCMH N GSK++E SDEN G +Q S N DN+ S G
Sbjct: 17 LEIQSGTCNVCSAPCSSCMHHNAEFSGSKSDESSDENSH-GVLASQCSFNGDNLLRSSGV 75
Query: 67 RACESLQHAVSETSNMLSVNSSHDSPSENAESRQLL 102
A S + SE S++ VNS+HD+ SENAES++++
Sbjct: 76 NAPGSSHNTSSEASHL--VNSNHDTSSENAESKEII 109
>AT1G43770.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:16548509-16550257 FORWARD LENGTH=431
Length = 431
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 845 IGLTAGKSSVRDLSDKDMATSSVLSKTLAFPEYQYIWQGVFEVHRNEKPPDLCT--GVQA 902
I L G SS R +++ +M + A P IW+G+ V K + CT G+ A
Sbjct: 258 IQLADGSSSCR-VAESNMPLTLTSRNYRAQPIKIPIWRGLMSV----KGGNSCTMDGIVA 312
Query: 903 HLSSCASPKVLEVVTKFLPKVSLSEVSRLSTWPSQF-HHGGVSEDNIALYFFARDVESYE 961
H+SS A PKV E + ++S + RL WP F +GG ++++AL+FF + E
Sbjct: 313 HVSSLACPKVHETASSLKGRLSAEILPRLEVWPKTFLKNGGPKDESVALFFFPSSESNDE 372
Query: 962 RHYKGLLDHMARNDLALKGLFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRQ 1016
+ + L+D M +ND A++ + + ELL+F S LP++S +N ++LWGVF+ RQ
Sbjct: 373 KVFDSLVDKMKKNDSAMRCVLNDAELLLFTSYMLPKDSWTFNSKYYLWGVFKPRQ 427
>AT4G17850.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: RING/FYVE/PHD zinc finger superfamily protein
(TAIR:AT3G02890.1); Has 200 Blast hits to 194 proteins
in 51 species: Archae - 0; Bacteria - 0; Metazoa - 61;
Fungi - 11; Plants - 116; Viruses - 0; Other Eukaryotes
- 12 (source: NCBI BLink). | chr4:9922990-9923850
FORWARD LENGTH=187
Length = 187
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 327 VCDICGDAGREDLLAICCRCSDGAEHTYCMREMLEKVPEGDWLCEEC-KDAEETEKKK 383
VCD CGD G E LL ICC C GAEHTYCM E ++KVP+ W C +C K+ +E ++K
Sbjct: 39 VCDTCGDQGYEYLLVICCNCGVGAEHTYCMMEKIDKVPDS-WSCYDCTKEVDEMREEK 95
>AT5G61100.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: zinc ion binding (TAIR:AT5G61110.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink). | chr5:24579170-24580327 REVERSE LENGTH=227
Length = 227
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 326 KVCDICGDAGREDLLAICCRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEETEKKKLD 385
K C++CG E L+ C C D EHTYC R M ++VP W+CEEC+D K +
Sbjct: 32 KPCEVCGSDANELLMMTCFMCRDTREHTYCARVMFQRVPRL-WICEECRDFSSVANKTAN 90
Query: 386 VEGKK 390
+ +
Sbjct: 91 AQSSR 95
>AT1G43770.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:16548509-16549907 FORWARD LENGTH=371
Length = 371
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 845 IGLTAGKSSVRDLSDKDMATSSVLSKTLAFPEYQYIWQGVFEVHRNEKPPDLCT--GVQA 902
I L G SS R +++ +M + A P IW+G+ V K + CT G+ A
Sbjct: 258 IQLADGSSSCR-VAESNMPLTLTSRNYRAQPIKIPIWRGLMSV----KGGNSCTMDGIVA 312
Query: 903 HLSSCASPKVLEVVTKFLPKVSLSEVSRLSTWPSQF-HHGGVSEDNIALYFF 953
H+SS A PKV E + ++S + RL WP F +GG ++++AL+FF
Sbjct: 313 HVSSLACPKVHETASSLKGRLSAEILPRLEVWPKTFLKNGGPKDESVALFFF 364