Miyakogusa Predicted Gene

Lj1g3v0116660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0116660.1 Non Chatacterized Hit- tr|I1JAP7|I1JAP7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,59.93,0,coiled-coil,NULL; seg,NULL; zinc finger,Zinc finger,
CCHC-type,CUFF.25265.1
         (855 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43630.1 | Symbols: TZP | zinc knuckle (CCHC-type) family pro...   169   8e-42

>AT5G43630.1 | Symbols: TZP | zinc knuckle (CCHC-type) family
           protein | chr5:17527261-17530207 FORWARD LENGTH=831
          Length = 831

 Score =  169 bits (428), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 227/490 (46%), Gaps = 68/490 (13%)

Query: 250 PCNSRINMSRNKGKEKSLSDGDANVRLSKEENDSQSSVESCNSTEFFPKGKKRPNFQQQL 309
           P  S     + KGKEK+LSD +       E+ +S  SVESCNS     +GKKRP F++QL
Sbjct: 217 PSGSYRRREKAKGKEKALSDENFGGDGEDEDEESFGSVESCNSAGLLSRGKKRPGFEEQL 276

Query: 310 ILGSKRVKKKHVEETSGSKSYVKQDISFINWISNMVKGL--SHSIQNGSNTLAVTLANRD 367
           I GSKR+K  + +E  GS S +KQD SF+NWISNM KG+   +   N       T +N +
Sbjct: 277 IFGSKRLKTLN-QECLGSTSKLKQDSSFMNWISNMTKGIWKGNEEDNSPFVALTTTSNAN 335

Query: 368 YH---DLRRPDEKLVTCKMSQDPGPKNTGFKSIFQSMYCSSLKNVGTRTFRQEGEGSEDL 424
            H   +     ++L  C + ++ G +NTGF+S FQS+YC           +++ +   D+
Sbjct: 336 GHGQVNAIVDQQQLSPCCVKENSGCRNTGFQSFFQSIYCP----------KKQSQDVVDM 385

Query: 425 EPSNMV-----QGIDATPITCCAEKNSSSEACTRRYDAGPSSQPMIIHAN-IFN--SQES 476
           +  N V     Q +   P  C   K    +  +   + GP ++P I     +FN  S+  
Sbjct: 386 DFPNDVNAAPLQELPWIPEHCDISKG--DDLSSSGNEIGPVAEPNISSGKVVFNQTSKTQ 443

Query: 477 SKNNPVEDE--NCSILGLIKEKETMAXXXXXXXXXXXXXXXIDSTAPSERKEAD---NIC 531
           S  N  ED+  N S++ L K K                     +  P    EAD   + C
Sbjct: 444 SSENKREDKEPNISLMSLSKSKP--------------------NEEPKTCGEADGKVSPC 483

Query: 532 LGRDAPG--NMWITRFSPKSTAPLVISDHLDERYESQVHINDCHKHISYMKKNCRIEETR 589
           L     G  ++WI+RFS K + P   +    +  E+    +D  K            ++R
Sbjct: 484 LTNRNSGLKSLWISRFSSKGSFPQKKASETAK--EANASASDAAK----------TRDSR 531

Query: 590 EQPANATEAFTGLHEDKDNNVHNNFNSLSSSPGFRNSVLMTSMFARRFGAIKHTTPTNKA 649
           +  A+       +      +  +    + SS    +S  M S+FARR  A+K   P+   
Sbjct: 532 KMLADKNVIRPSISSVDGPDKPDTVLPIVSSMRIESSEAMASLFARRLEAMKSIMPSGSL 591

Query: 650 DCTS---QVVLFCLFCGTRGHQLCDCSEIAEGELEDLQKNMNSYGELEGSPCICIKCFQT 706
              +   Q  L C +CG +GH L DC E+ + EL DL +N++     E +  +CI+CFQ 
Sbjct: 592 AENAEEEQRDLICFYCGKKGHCLRDCLEVTDTELRDLVQNISVRNGREEASSLCIRCFQL 651

Query: 707 NHWAISCPTS 716
           +HWA +CP +
Sbjct: 652 SHWAATCPNA 661