Miyakogusa Predicted Gene
- Lj1g3v0116490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0116490.1 Non Chatacterized Hit- tr|A5BHP5|A5BHP5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,73.91,0.000004,Bet v1-like,NULL; SUBFAMILY NOT NAMED,NULL;
PHOSPHATIDYLCHOLINE TRANSFER PROTEIN,NULL; START,Lipid-b,CUFF.25249.1
(321 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14500.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 468 e-132
AT3G23080.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 427 e-120
AT3G23080.2 | Symbols: | Polyketide cyclase/dehydrase and lipid... 386 e-107
AT4G14500.2 | Symbols: | Polyketide cyclase/dehydrase and lipid... 352 2e-97
AT1G64720.1 | Symbols: CP5 | Polyketide cyclase/dehydrase and li... 276 2e-74
AT5G54170.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 275 3e-74
AT3G13062.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 112 3e-25
AT3G13062.2 | Symbols: | Polyketide cyclase/dehydrase and lipid... 112 4e-25
AT1G55960.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 108 6e-24
AT3G13062.3 | Symbols: | Polyketide cyclase/dehydrase and lipid... 107 9e-24
>AT4G14500.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr4:8334391-8337022
FORWARD LENGTH=433
Length = 433
Score = 468 bits (1204), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/321 (68%), Positives = 251/321 (78%), Gaps = 3/321 (0%)
Query: 1 MEDSFFDVVEFLKKPSIAETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSK 60
M++++FD++ F K PS ETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGL++LGFRSK
Sbjct: 1 MDETYFDLLNFFKNPSFTETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLIYLGFRSK 60
Query: 61 LRFLWTAPPGFGARRLWFAFTALSAFSICRTFWSNFKGKKNKXXXXXXXXXXXXXXXXXX 120
LRFLWTAPPGFGARRLW AFTALSAFS+CRT WS + NK
Sbjct: 61 LRFLWTAPPGFGARRLWLAFTALSAFSVCRTIWSRNDTRANKSATGSASSQTPVEDNDES 120
Query: 121 XXKQTTRSGDKAEERGKDIVTQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHD 180
+R D +DIVT+ DLE+LL LLE ++WQ M+++TPNM YQAWRH+
Sbjct: 121 GL--ASRGSDNGTVT-EDIVTENDLEHLLQLLEVGNAALEWQSMMDKTTPNMSYQAWRHE 177
Query: 181 PETGPTVYRSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIK 240
PETGP +YRSRTVFEDATP++VRDFFWDD+FRPKWD MLA K LEE Q GTMI W K
Sbjct: 178 PETGPVIYRSRTVFEDATPDIVRDFFWDDEFRPKWDFMLANFKTLEEDTQTGTMIVQWRK 237
Query: 241 KFPFFCSDREYIIARRIWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESR 300
KFPFFCSDREYII RRIW++G YYCVTKGVPYP+LPKRDKPRRV+ YFSSWVI+ VESR
Sbjct: 238 KFPFFCSDREYIIGRRIWESGKKYYCVTKGVPYPALPKRDKPRRVELYFSSWVIRAVESR 297
Query: 301 KGDGQLTACEVTLLHYEDMGI 321
KGDGQ TACEV+L+HYEDMGI
Sbjct: 298 KGDGQQTACEVSLVHYEDMGI 318
>AT3G23080.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:8207612-8209181
REVERSE LENGTH=419
Length = 419
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/313 (67%), Positives = 242/313 (77%), Gaps = 15/313 (4%)
Query: 9 VEFLKKPSIAETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSKLRFLWTAP 68
++F KPS+ ETFVD+LLCAVPIW+ VMIGLLIGWSWRPRWT LV+LGFRSKLRFL T P
Sbjct: 5 MDFFNKPSVTETFVDVLLCAVPIWVTVMIGLLIGWSWRPRWTSLVYLGFRSKLRFLCTVP 64
Query: 69 PGFGARRLWFAFTALSAFSICRTFWSNFKGKKNKXXXXXXXXXXXXXXXXXXXXKQTTRS 128
PGFGARR+W AFTALSAFS+C T SN N + +R+
Sbjct: 65 PGFGARRIWLAFTALSAFSVCST--SNKSSVNN-------------GSSKPVEEEAFSRA 109
Query: 129 GDKAEERGKDIVTQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHDPETGPTVY 188
DK E+ KD+VT+ DLE+LLHLLE+ +WQ M++STPNM YQAWRH+PE GP VY
Sbjct: 110 SDKVTEKEKDVVTEKDLEHLLHLLEAGNASFEWQSMMDKSTPNMSYQAWRHEPEIGPVVY 169
Query: 189 RSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSD 248
RSRTVFED TP++VRDFFWDD+FRPKWD MLAY K LEE P+ GT I HWIKKFPFFCSD
Sbjct: 170 RSRTVFEDVTPDIVRDFFWDDEFRPKWDTMLAYFKTLEEDPKTGTTIVHWIKKFPFFCSD 229
Query: 249 REYIIARRIWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTA 308
REYII RRIW++G YY VTKGVPY +L KRDKPRRV+ YFSSW+I VESRKGDGQ+TA
Sbjct: 230 REYIIGRRIWESGRKYYAVTKGVPYKALSKRDKPRRVELYFSSWIINAVESRKGDGQMTA 289
Query: 309 CEVTLLHYEDMGI 321
CEV+L+HYEDMGI
Sbjct: 290 CEVSLVHYEDMGI 302
>AT3G23080.2 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:8207612-8209088
REVERSE LENGTH=388
Length = 388
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/286 (67%), Positives = 219/286 (76%), Gaps = 15/286 (5%)
Query: 36 MIGLLIGWSWRPRWTGLVFLGFRSKLRFLWTAPPGFGARRLWFAFTALSAFSICRTFWSN 95
MIGLLIGWSWRPRWT LV+LGFRSKLRFL T PPGFGARR+W AFTALSAFS+C T SN
Sbjct: 1 MIGLLIGWSWRPRWTSLVYLGFRSKLRFLCTVPPGFGARRIWLAFTALSAFSVCST--SN 58
Query: 96 FKGKKNKXXXXXXXXXXXXXXXXXXXXKQTTRSGDKAEERGKDIVTQADLENLLHLLESK 155
N + +R+ DK E+ KD+VT+ DLE+LLHLLE+
Sbjct: 59 KSSVNN-------------GSSKPVEEEAFSRASDKVTEKEKDVVTEKDLEHLLHLLEAG 105
Query: 156 GGVMDWQCFMERSTPNMQYQAWRHDPETGPTVYRSRTVFEDATPELVRDFFWDDDFRPKW 215
+WQ M++STPNM YQAWRH+PE GP VYRSRTVFED TP++VRDFFWDD+FRPKW
Sbjct: 106 NASFEWQSMMDKSTPNMSYQAWRHEPEIGPVVYRSRTVFEDVTPDIVRDFFWDDEFRPKW 165
Query: 216 DAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDREYIIARRIWQAGNTYYCVTKGVPYPS 275
D MLAY K LEE P+ GT I HWIKKFPFFCSDREYII RRIW++G YY VTKGVPY +
Sbjct: 166 DTMLAYFKTLEEDPKTGTTIVHWIKKFPFFCSDREYIIGRRIWESGRKYYAVTKGVPYKA 225
Query: 276 LPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVTLLHYEDMGI 321
L KRDKPRRV+ YFSSW+I VESRKGDGQ+TACEV+L+HYEDMGI
Sbjct: 226 LSKRDKPRRVELYFSSWIINAVESRKGDGQMTACEVSLVHYEDMGI 271
>AT4G14500.2 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr4:8334391-8336468
FORWARD LENGTH=294
Length = 294
Score = 352 bits (903), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/280 (61%), Positives = 198/280 (70%), Gaps = 5/280 (1%)
Query: 1 MEDSFFDVVEFLKKPSIAETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSK 60
M++++FD++ F K PS ETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGL++LGFRSK
Sbjct: 1 MDETYFDLLNFFKNPSFTETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLIYLGFRSK 60
Query: 61 LRFLWTAPPGFGARRLWFAFTALSAFSICRTFWSNFKGKKNKXXXXXXXXXXXXXXXXXX 120
LRFLWTAPPGFGARRLW AFTALSAFS+CRT WS + NK
Sbjct: 61 LRFLWTAPPGFGARRLWLAFTALSAFSVCRTIWSRNDTRANKSATGSASSQTPVEDNDES 120
Query: 121 XXKQTTRSGDKAEERGKDIVTQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHD 180
+R D +DIVT+ DLE+LL LLE ++WQ M+++TPNM YQAWRH+
Sbjct: 121 GL--ASRGSDNGTVT-EDIVTENDLEHLLQLLEVGNAALEWQSMMDKTTPNMSYQAWRHE 177
Query: 181 PETGPTVYRSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIK 240
PETGP +YRSRTVFEDATP++VRDFFWDD+FRPKWD MLA K LEE Q GTMI W K
Sbjct: 178 PETGPVIYRSRTVFEDATPDIVRDFFWDDEFRPKWDFMLANFKTLEEDTQTGTMIVQWRK 237
Query: 241 KFP--FFCSDREYIIARRIWQAGNTYYCVTKGVPYPSLPK 278
K DREYII RRIW++G YYCVTK PK
Sbjct: 238 KVSGLLILCDREYIIGRRIWESGKKYYCVTKNSVGDKTPK 277
>AT1G64720.1 | Symbols: CP5 | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr1:24046887-24048537
REVERSE LENGTH=385
Length = 385
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/301 (46%), Positives = 175/301 (58%), Gaps = 47/301 (15%)
Query: 21 FVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSKLRFLWTAPPGFGARRLWFAF 80
F D+++ P+W+AV G+L+GW WRP+W L + +FL P
Sbjct: 17 FSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPT---------- 66
Query: 81 TALSAFSICRTFWSNFKGKKNKXXXXXXXXXXXXXXXXXXXXKQTTRSGDKAEERGKDIV 140
SI +T S E+ G V
Sbjct: 67 ------SILKT-----------------------------SSHHVNPSLSSKEKTG--FV 89
Query: 141 TQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHDPETGPTVYRSRTVFEDATPE 200
T D +L L+E K G W M+RSTP YQAWR DPE GP YRSRTVFEDATPE
Sbjct: 90 TDDDFRHLWKLVEVKDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPE 149
Query: 201 LVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDREYIIARRIWQA 260
+VRDFFWDD+FR KWD ML Y LE C GTM+ W++KFPFFCSDREYII RRIW A
Sbjct: 150 MVRDFFWDDEFRSKWDDMLLYSSTLERCKDTGTMVVQWVRKFPFFCSDREYIIGRRIWDA 209
Query: 261 GNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVTLLHYEDMG 320
G +YC+TKGV YPS+P+++KPRRVD Y+SSW I+ VES++GDG++T+CEV L H+EDMG
Sbjct: 210 GRVFYCITKGVQYPSVPRQNKPRRVDLYYSSWCIRAVESKRGDGEMTSCEVLLFHHEDMG 269
Query: 321 I 321
I
Sbjct: 270 I 270
>AT5G54170.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr5:21985056-21987039
REVERSE LENGTH=449
Length = 449
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 186/312 (59%), Gaps = 20/312 (6%)
Query: 23 DILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSKLRFLWTAPPGFGARRLWFAFTA 82
I+L + WLA +IGL+IGW+W+PRW V +++ +AP F + ++
Sbjct: 6 SIILGLITGWLAFVIGLVIGWAWKPRW---VSSSNNRQVKLQCSAPRSFDLSLPSSSPSS 62
Query: 83 -----LSAFS--------ICRTFWSNFKGKKNKXXXXXXXXXXXXXXXXXXXXKQTTRSG 129
L F +C T+ + ++ +
Sbjct: 63 VVTSPLKGFGSAPCLKALVCDTWTMALRQQRQTVSPDSSSSSYDSSEQHLDLVSRV---- 118
Query: 130 DKAEERGKDIVTQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHDPETGPTVYR 189
K +ER + VT+ DL +L+ L+E K G W M+R TP M+YQAW +P+ GPT YR
Sbjct: 119 KKTKERLPNTVTELDLRHLVQLVERKDGGQAWIQMMDRFTPGMRYQAWLREPKNGPTEYR 178
Query: 190 SRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDR 249
SRTVFEDATP ++RDFFWDD+FRP WD ML+ +EECP GTMI WI+KFPFFCSDR
Sbjct: 179 SRTVFEDATPVMLRDFFWDDEFRPTWDTMLSNSTTVEECPSTGTMIVRWIRKFPFFCSDR 238
Query: 250 EYIIARRIWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTAC 309
EY+I RRIW GN+YYCVTKGV PS+P +K +RVD ++SSW I+PVESR+ DG +AC
Sbjct: 239 EYVIGRRIWNCGNSYYCVTKGVSVPSIPPNNKQKRVDLFYSSWCIRPVESRRDDGVTSAC 298
Query: 310 EVTLLHYEDMGI 321
EV L H+EDMGI
Sbjct: 299 EVLLFHHEDMGI 310
>AT3G13062.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:4184777-4186795
FORWARD LENGTH=403
Length = 403
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 101/185 (54%), Gaps = 9/185 (4%)
Query: 139 IVTQADLENLLHLL-ESKGGVMDWQCFMERSTPNMQYQAWRHDPETG-PTVYRSRTVFED 196
+V+ DL+ L+ L E W+ +++S P + Y A P G P Y S TVFED
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTTVFED 142
Query: 197 ATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDREYIIARR 256
+PE++RDF+ D+++R +WD + + L+ +G I IKKFP + REY++A +
Sbjct: 143 CSPEVLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLL-TPREYVLAWK 201
Query: 257 IWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVTLLHY 316
+W+ + +YC K + +P++ K RV + S W I+ V R ACE+ ++H
Sbjct: 202 LWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGR------NACEIHMVHQ 255
Query: 317 EDMGI 321
ED G+
Sbjct: 256 EDAGL 260
>AT3G13062.2 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:4184777-4187268
FORWARD LENGTH=440
Length = 440
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 101/185 (54%), Gaps = 9/185 (4%)
Query: 139 IVTQADLENLLHLL-ESKGGVMDWQCFMERSTPNMQYQAWRHDPETG-PTVYRSRTVFED 196
+V+ DL+ L+ L E W+ +++S P + Y A P G P Y S TVFED
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTTVFED 142
Query: 197 ATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDREYIIARR 256
+PE++RDF+ D+++R +WD + + L+ +G I IKKFP + REY++A +
Sbjct: 143 CSPEVLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLL-TPREYVLAWK 201
Query: 257 IWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVTLLHY 316
+W+ + +YC K + +P++ K RV + S W I+ V R ACE+ ++H
Sbjct: 202 LWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGR------NACEIHMVHQ 255
Query: 317 EDMGI 321
ED G+
Sbjct: 256 EDAGL 260
>AT1G55960.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr1:20927962-20929825
REVERSE LENGTH=403
Length = 403
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 132 AEERGKDIVTQADLENLLHLLE--SKGGVMDWQCFMERSTPNMQYQAWRHDPETG--PTV 187
++ R +V+ DL+ L+ LE + W+ + +S + Y A R P+ G P
Sbjct: 75 SQSRISKLVSDEDLKFLIENLEEETNDSTEIWEHVIHKSNDRISYSAKRCKPKDGGGPMK 134
Query: 188 YRSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCS 247
Y S TVFE + E+VRDF+ D+D+R WD + + L+ G I IKKFP S
Sbjct: 135 YLSVTVFEGFSAEIVRDFYMDNDYRKLWDKTVVEHEQLQVDSNTGIEIGRTIKKFPLLTS 194
Query: 248 DREYIIARRIWQAG-NTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQL 306
REY++A R+WQ +YC TK + +P++ K RV + S W I+ V R
Sbjct: 195 -REYVLAWRLWQGKEKKFYCFTKECDHNMVPQQRKYVRVSYFRSGWRIRQVPGR------ 247
Query: 307 TACEVTLLHYEDMGI 321
ACE+ + H E+ G+
Sbjct: 248 NACEIKMFHQENAGL 262
>AT3G13062.3 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:4184777-4186795
FORWARD LENGTH=411
Length = 411
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 139 IVTQADLENLLHLL-ESKGGVMDWQCFMERSTPNMQYQAWRHDP---------ETGPTVY 188
+V+ DL+ L+ L E W+ +++S P + Y A P + P Y
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTVISKFYLCDGSPMKY 142
Query: 189 RSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSD 248
S TVFED +PE++RDF+ D+++R +WD + + L+ +G I IKKFP +
Sbjct: 143 LSTTVFEDCSPEVLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLL-TP 201
Query: 249 REYIIARRIWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTA 308
REY++A ++W+ + +YC K + +P++ K RV + S W I+ V R A
Sbjct: 202 REYVLAWKLWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGR------NA 255
Query: 309 CEVTLLHYEDMGI 321
CE+ ++H ED G+
Sbjct: 256 CEIHMVHQEDAGL 268