Miyakogusa Predicted Gene

Lj1g3v0114230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0114230.1 Non Chatacterized Hit- tr|I1LFV4|I1LFV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48211 PE,79.26,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
HELICASE_CTER,Helicase, C-terminal; helic,CUFF.25235.1
         (554 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14790.1 | Symbols: ATSUV3, EDA15 | ATP-dependent RNA helicas...   748   0.0  
AT5G39840.1 | Symbols:  | ATP-dependent RNA helicase, mitochondr...   408   e-114

>AT4G14790.1 | Symbols: ATSUV3, EDA15 | ATP-dependent RNA helicase,
           mitochondrial (SUV3) | chr4:8496351-8499829 REVERSE
           LENGTH=571
          Length = 571

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/481 (71%), Positives = 408/481 (84%)

Query: 45  DFTDLTSPHTWYPQARSKRRRVILHVGPTNSGKTYHALKQLESSASGIYCGPLRLLAWEI 104
           DFTDLT PHTWYP AR K+R+VILHVGPTNSGKTY ALK LE S+SG+YCGPLRLLAWE+
Sbjct: 70  DFTDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLEQSSSGVYCGPLRLLAWEV 129

Query: 105 AKRLNKANVPCDLITGQEREEVDGANHRAATVEMADVSSDYQCAVIDEIQMLGCSTRGYS 164
           AKRLNKANVPCDLITGQE++ V+GA H+A TVEMADV+S Y CA+IDEIQM+GC  RG++
Sbjct: 130 AKRLNKANVPCDLITGQEKDLVEGATHKAVTVEMADVTSVYDCAIIDEIQMVGCKQRGFA 189

Query: 165 FTRALLGIAADELHLCGDPAAVPLVQEMLKITGDEVEVKFYERLSPLVPLKVPLGSFSNV 224
           FTRALLGIAADELHLCGDPA VPLV+++LK+TGD+VEV  YERLSPLVPLKVP+ S S++
Sbjct: 190 FTRALLGIAADELHLCGDPAVVPLVEDILKVTGDDVEVHTYERLSPLVPLKVPVSSVSSI 249

Query: 225 RNGDCIVTFSRKDIYGLKKKIEREGRHLCSVVYGSLPPETRTRQATMFNDASSEFDVLVA 284
           + GDC+VTFSRKDIY  KK IER G+HLCSVVYGSLPPETRT QAT FND +++FDVLVA
Sbjct: 250 KTGDCLVTFSRKDIYAYKKTIERAGKHLCSVVYGSLPPETRTAQATRFNDETNDFDVLVA 309

Query: 285 SDAIGMGLNLNISRIIFSTMKKFDGFEMRDLTVPEIKQIAGRAGRYGSNFPVGEVTCMDA 344
           SDAIGMGLNLNISRIIFST++K+DG E RDLTV EIKQIAGRAGR+ S FP+GEVTC+  
Sbjct: 310 SDAIGMGLNLNISRIIFSTLQKYDGSETRDLTVSEIKQIAGRAGRFQSKFPIGEVTCLHK 369

Query: 345 DDXXXXXXXXXXXXXILERAGLLPTYELMYMYSRLHPKYGFCQVLEHFIDNAKLSENYFI 404
           +D             ILERAGL PT++L+  YS+ HP +G  Q+LEHF++NAKLS NYFI
Sbjct: 370 EDLPLLHSSLKSPSPILERAGLFPTFDLLSGYSQAHPTHGLYQILEHFVENAKLSSNYFI 429

Query: 405 VNCEQVLKVAAVIDGFPLGLHEKYLFCISPADMDDDISSQGLVQFAENYAKKGLVRLREI 464
            N E ++KVAA++D  PLGL EKYLF +SP D++D+IS QGL QFA+N++K G+VRLREI
Sbjct: 430 SNVEDMMKVAAIVDELPLGLQEKYLFVVSPVDVNDEISGQGLAQFAQNFSKAGIVRLREI 489

Query: 465 FTPGTLTVPKTPAALKELESIHKVLDLYVWLSFRLDESFPDRELASSQKSICSMLIEEFL 524
             P  + VPKTP  LKELESIHKVLDLYVWLS RL++SFPDRE+A+SQKSIC++LIE+FL
Sbjct: 490 LAPDRVKVPKTPTELKELESIHKVLDLYVWLSLRLEDSFPDREVAASQKSICNLLIEQFL 549

Query: 525 E 525
           E
Sbjct: 550 E 550


>AT5G39840.1 | Symbols:  | ATP-dependent RNA helicase,
           mitochondrial, putative | chr5:15946769-15949186 FORWARD
           LENGTH=776
          Length = 776

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/515 (39%), Positives = 321/515 (62%), Gaps = 15/515 (2%)

Query: 24  FHLYFQFKVHPYSTRTASIRN--DFTDLTSPHTWYPQARSKRRRVILHVGPTNSGKTYHA 81
           F ++ +F +  +       ++  D  DLT P TW+P AR+ +R+++ H GPTNSGKTY+A
Sbjct: 232 FPVFVEFCIEEFPDEIKRFKSIVDTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNA 291

Query: 82  LKQLESSASGIYCGPLRLLAWEIAKRLNKANVPCDLITGQEREEVDGANHRAATVEMADV 141
           L++   + +G+YC PLRLLA E+  ++N   + C L+TGQE++ V  ANH + TVEM   
Sbjct: 292 LQRFMEAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVST 351

Query: 142 SSDYQCAVIDEIQMLGCSTRGYSFTRALLGIAADELHLCGDPAAVPLVQEMLKITGDEVE 201
              Y+ AV+DEIQM+   +RG+++T+ALLG+ ADE+HLCGDP+ + +V++M   TGDE+ 
Sbjct: 352 DELYEVAVLDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELV 411

Query: 202 VKFYERLSPL-VPLKVPLGSFSNVRNGDCIVTFSRKDIYGLKKKIEREGRHLCSVVYGSL 260
            + YER  PL V  K  LG   NV++GDC+V FSR++I+ +K  IE+   H C V+YG+L
Sbjct: 412 EEHYERFKPLVVEAKTLLGELKNVKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGAL 471

Query: 261 PPETRTRQATMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEMRDLTVPEI 320
           PPETR +QA +FND  +E+DVLVASDA+GMGLNLNI R++F ++ K++G ++  +   ++
Sbjct: 472 PPETRRQQAKLFNDQENEYDVLVASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQV 531

Query: 321 KQIAGRAGRYGSNFPVGEVTCMDADDXXXXXXXXXXXXXILERAGLLPTYELMYMYSRLH 380
           KQIAGRAGR GS +P G  T +  +D              + + GL P +E + +++   
Sbjct: 532 KQIAGRAGRRGSRYPDGLTTTLHLEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQV 591

Query: 381 PKYGFCQVLEHFIDNAKLSENYFIVNCEQVLKVAAVIDGFP-LGLHEKYLFCISPADMDD 439
           P   F  +LEHF  + +L  +YF+   + V KVA +++    L L +++ FC +P ++ +
Sbjct: 592 PDMAFSNLLEHFGKHCRLDGSYFLCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRN 651

Query: 440 DISSQGLVQFAENYAKKGLVRLREIFTPGTLTVPKTPAA----LKELESIHKVLDLYVWL 495
             +   L +FA +Y++   V +        + +PK+ A     L +LES H++L +Y+WL
Sbjct: 652 PRAMHNLYRFASSYSQNMPVNV-------AMGIPKSSAKSDAQLLDLESRHQILSMYLWL 704

Query: 496 SFRLDESFPDRELASSQKSICSMLIEEFLERFGWQ 530
           S + +E+FP  E   +  +  + L+ E L +  W+
Sbjct: 705 SNQFEENFPFVEKVEAMATNIAELLGESLSKASWK 739