Miyakogusa Predicted Gene
- Lj1g3v0114210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0114210.1 tr|F2EIQ7|F2EIQ7_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,25.4,8e-17,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat;
PPR,,CUFF.25232.1
(551 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 503 e-142
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 9e-45
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 8e-44
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 174 1e-43
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 6e-42
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 157 1e-38
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 155 8e-38
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 155 9e-38
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 150 2e-36
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 5e-36
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 7e-36
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 145 5e-35
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 142 9e-34
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 3e-33
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 138 1e-32
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 4e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 5e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 5e-32
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 130 3e-30
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 6e-30
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 128 1e-29
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 1e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 127 2e-29
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 9e-29
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 124 2e-28
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 122 8e-28
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 117 2e-26
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 116 4e-26
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 115 1e-25
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 114 1e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 111 2e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 6e-24
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 104 2e-22
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 100 3e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 99 5e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 91 2e-18
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 90 4e-18
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 90 4e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 89 1e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 88 1e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 88 2e-17
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 85 1e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 83 4e-16
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 83 4e-16
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 83 6e-16
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 82 8e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 82 9e-16
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 82 1e-15
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 82 1e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 80 3e-15
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 77 2e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 77 3e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 76 5e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 76 6e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 75 9e-14
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 75 1e-13
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 72 8e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 72 1e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 72 1e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 71 3e-12
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 70 3e-12
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 70 4e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 70 5e-12
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 69 8e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 67 5e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 65 8e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 65 9e-11
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 65 1e-10
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 65 2e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 64 2e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 63 5e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 63 5e-10
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 63 5e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 61 2e-09
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 60 3e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 59 7e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 57 4e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 56 6e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 52 8e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 503 bits (1295), Expect = e-142, Method: Compositional matrix adjust.
Identities = 267/559 (47%), Positives = 359/559 (64%), Gaps = 19/559 (3%)
Query: 1 MLTKFRILHLFTHRLSPRIAAGNGSHRFLYGNPLCTAVKPPLTP-ESPELPAWVK--FSD 57
MLTK RI L ++ L RI RFL N TA + P+ ESPELP+W+K S+
Sbjct: 1 MLTKLRISKLVSYTLPRRIF----QRRFLVTNN--TAEESPIVAAESPELPSWIKDFLSN 54
Query: 58 NPTPPNA---DSDDDFVIPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKEHH 114
P+ ++ D+DFVIPSLA+WV++ ++ ++ + + ++ + L +
Sbjct: 55 KPSSSSSSVSKDDEDFVIPSLANWVESQKF-SRQQVSEGNVVKKPVEDIDKVCDFLNKKD 113
Query: 115 SSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMI 174
+S E V + L V+ S V Q+L+RF+N W A+GFF WA +QTGY HS YN M+
Sbjct: 114 TSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMV 173
Query: 175 DILGKSKNFDLVWELVEEMAKHE--GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM-KEF 231
D+LGK +NFDL+WELV EM K+E VTL TM+KV+RRL K+GK+ A+ AF M K +
Sbjct: 174 DVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSY 233
Query: 232 GVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQAR 291
GV DT A+N LMDALVK NS+EHAH V L+ I ++ +FNIL++G+C+ R FD AR
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDAR 293
Query: 292 KVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
+M+ MK F PDV +Y SF+E+YC + DFR+V+++LEEM ENGC PN VTYTIVM +L
Sbjct: 294 AMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSL 353
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
GK+ Q+++AL VYEKMK G VPD FYSSLI IL K GR KDA ++FEDM QG+ RDV
Sbjct: 354 GKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDV 413
Query: 412 VTYNTMISTACAHSREETALRLLKEMEE---RSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+ YNTMIS A HSR+E ALRLLK ME+ SC P++ETY P
Sbjct: 414 LVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGIL 473
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEA 528
HM KND+S D+ T+ LL+ GL SGK++ AC FFEE + +G+ PR K LV +LE
Sbjct: 474 LHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Query: 529 KSMLKEKEHIEKLMTPPSI 547
K+M + K I+ L+ ++
Sbjct: 534 KNMAEAKLKIQSLVQSKTM 552
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 250/415 (60%), Gaps = 4/415 (0%)
Query: 131 VSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELV 190
+S+ V ++L RF +DW A G WA++ G++HS + Y++ +DILGK+K +D + E V
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV 144
Query: 191 EEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKG 250
E M + + VTL T+ K++RR AG+ E+A+ F R+ EFG++ +T ++N+L+D L K
Sbjct: 145 ERM-RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKE 203
Query: 251 NSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
VE A VLL+ KS I N+ +FNI ++GWC+ ++A +++MK HGF P V SY
Sbjct: 204 KRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 263
Query: 311 SFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
+ I YC +F KV ++L EM NG PPN++TYT +M +L + +AL V +MK
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFE-DMPKQGIVRDVVTYNTMISTACAHSREET 429
G PD+ FY+ LI L +AGRL++A VF +MP+ G+ + TYN+MI+ C H E+
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 430 ALRLLKEMEERS-CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF-KNDLSPDLGTFSLL 487
A+ LLKEME + C PD+ TY P + M K+ LS D T++ L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
+ L ++ + A FEE+IS+ +TPRH L+++++ K+M + E IE +M
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 250/415 (60%), Gaps = 4/415 (0%)
Query: 131 VSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELV 190
+S+ V ++L RF +DW A G WA++ G++HS + Y++ +DILGK+K +D + E V
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV 144
Query: 191 EEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKG 250
E M + + VTL T+ K++RR AG+ E+A+ F R+ EFG++ +T ++N+L+D L K
Sbjct: 145 ERM-RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKE 203
Query: 251 NSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
VE A VLL+ KS I N+ +FNI ++GWC+ ++A +++MK HGF P V SY
Sbjct: 204 KRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 263
Query: 311 SFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
+ I YC +F KV ++L EM NG PPN++TYT +M +L + +AL V +MK
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFE-DMPKQGIVRDVVTYNTMISTACAHSREET 429
G PD+ FY+ LI L +AGRL++A VF +MP+ G+ + TYN+MI+ C H E+
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 430 ALRLLKEMEERS-CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF-KNDLSPDLGTFSLL 487
A+ LLKEME + C PD+ TY P + M K+ LS D T++ L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
+ L ++ + A FEE+IS+ +TPRH L+++++ K+M + E IE +M
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 222/425 (52%), Gaps = 3/425 (0%)
Query: 101 DYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQ 160
D V IS +L +H + + + L + +VS++ V+Q+LKR N PA FF WA+
Sbjct: 36 DLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRI 95
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY-VTLYTMTKVLRRLTKAGKHE 219
+ HS E Y+++++ILG SK F L+W+ + E ++ + ++ V R ++A
Sbjct: 96 PDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPS 155
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
+A AF RM EFG+ L+ L+ +L V HA + K I ++ +++IL+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
GW R+R+ ARKV ++M E V D+ +YN+ +++ C D ++ +EM G
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+A ++ I + A AG + A +V ++MK + +VP+ ++ +I L K ++ DA +
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
++M ++G D TYN++++ C H A +LL M+ C PD TY+
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL-RKSGKLDHACSFFEELISRGLTPRHG 517
E M + P + T+++++HGL RK GKL+ AC +FE +I G+ P
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYST 455
Query: 518 ALKQL 522
++ L
Sbjct: 456 TVEML 460
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 1/226 (0%)
Query: 302 FVPDVFSYNSFIESYCHDKDFRKV-DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
F + SY+ +E K F + D ++E N ++ + IV A +A S+A
Sbjct: 98 FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
+ +M GI P L+ L + A + F GIV TY+ ++
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 421 ACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPD 480
A ++ EM ER+C DL Y+ + M L PD
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277
Query: 481 LGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+F++ +H +G + A + + L P ++K L
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 323
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 217/448 (48%), Gaps = 17/448 (3%)
Query: 90 LVTPTFNENKH-DYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWV 148
LV P +E++ VE I +L+ HHS + AL+ G + + ++L R +
Sbjct: 53 LVCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGN 112
Query: 149 PAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH-------EGYVT 201
+ FF WA Q GY HS E+ M+ IL K + F VW L+EEM K E +V
Sbjct: 113 LGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVV 172
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
L +RR A + A+ M ++G++ D L+DAL K SV+ A V
Sbjct: 173 L------MRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFE 226
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
+ + P N F L+ GWCR +A++V+ MKE G PD+ + + + Y H
Sbjct: 227 DMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKA-GQLSQALEVYEKMKSHGIVPDTPFYS 380
++ +M + G PN YT+++ AL + ++ +A+ V+ +M+ +G D Y+
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
+LI K G + V +DM K+G++ VTY ++ + E L L+++M+ R
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
C PDL Y+ M N LSP + TF ++++G G L A
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 501 CSFFEELISRGL--TPRHGALKQLVKDL 526
C+ F+E++SRG+ P++G LK L+ +L
Sbjct: 467 CNHFKEMVSRGIFSAPQYGTLKSLLNNL 494
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 221/442 (50%), Gaps = 6/442 (1%)
Query: 96 NENKHDYVEAISTLLKEHHSSPELVA-QALDGHGFQVSNSSVQQILKRFNNDWVPAFGFF 154
+E D + + K SSP+LV ALD G +VS V+ +L RF N + + FF
Sbjct: 62 SEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFF 121
Query: 155 TWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTK 214
W++ Q YEHS Y++MI+ K + + L+W+L+ M K + + + T V+R+ +
Sbjct: 122 QWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK-MLNVETFCIVMRKYAR 180
Query: 215 AGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSF 274
A K ++AI AF M+++ + + A N L+ AL K +V A V + +S ++
Sbjct: 181 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTY 240
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
+IL+ GW + N +AR+V +M + G PD+ +Y+ ++ C + ++ M
Sbjct: 241 SILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDP 300
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
+ C P Y++++ G +L +A++ + +M+ G+ D ++SLI KA R+K+
Sbjct: 301 SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN 360
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
V ++M +G+ + + N ++ ++ A + ++M + C+PD +TY
Sbjct: 361 VYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIK 419
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
++M K + P + TFS+L++GL + AC EE+I G+ P
Sbjct: 420 MFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Query: 515 R---HGALKQLVKDLEAKSMLK 533
G L+QL+ E + +LK
Sbjct: 480 SGVTFGRLRQLLIKEEREDVLK 501
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+++++ GK N E+ EM + + T + ++ L KAG+ ++A+ R M
Sbjct: 240 YSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD 299
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
T ++L+ N +E A LE +S + + FN L+ +C+
Sbjct: 300 PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMK 359
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCH--DKD-----FRKVDQVLEEMSENGCPPNA 341
+V+++MK G P+ S N + +KD FRK+ +V C P+A
Sbjct: 360 NVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--------CEPDA 411
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
TYT+V+ + ++ A +V++ M+ G+ P +S LI L + + AC + E+
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
M + GI VT+ + RE+ L+ L E
Sbjct: 472 MIEMGIRPSGVTFGRLRQLLIKEEREDV-LKFLNE 505
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 199/413 (48%), Gaps = 2/413 (0%)
Query: 103 VEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTG 162
VE + ++ E + + LD +S+ + ++L+RF + PAF FF WA + G
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 190
Query: 163 YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
+ H YN M+ IL K++ F+ + ++EEM +G +T+ T T ++ A + + A+
Sbjct: 191 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAV 249
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWC 282
F MK++ + +N L+D+L + + A + + K N ++ +L+NGWC
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
RVRN +A ++ DM + G PD+ ++N +E + ++ M G PN
Sbjct: 310 RVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVR 369
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
+YTI++ K + A+E ++ M G+ PD Y+ LI G +L ++ ++M
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
++G D TYN +I E A R+ +M + +P + T++
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL-TP 514
E M K + PD ++++L+ GL GK AC + EE++ +G+ TP
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSL 266
+L L ++ K DAI F MK G + + +++ K +S+E A + S
Sbjct: 339 MLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD 326
+ ++ + L+ G+ + D +++++M+E G PD +YN+ I+ + K
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
++ +M +N P+ T+ ++M + A V+E+M GI PD Y+ LI L
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Query: 387 GKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
G+ ++AC E+M +G+ ++ YN
Sbjct: 519 IGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 36/212 (16%)
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHED 220
+G + +Y +I G K D V+EL++EM
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM--------------------------- 429
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMN 279
+E G D N L+ + EHA + + ++ I + +FN++M
Sbjct: 430 --------QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
+ RN++ R V E+M + G PD SY I + R+ + LEEM + G
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 541
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
+ Y + GQ E+ ++ K G
Sbjct: 542 PLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 2/413 (0%)
Query: 103 VEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTG 162
VE + ++ E + + LD +S+ + ++L+RF + PAF FF WA + G
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 190
Query: 163 YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
+ H+ YN M+ IL K++ F+ + ++EEM +G +T+ T T ++ A + + A+
Sbjct: 191 FAHASRTYNSMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAV 249
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWC 282
F MK++ + +N L+D+L + + A + + K N ++ +L+NGWC
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
RVRN +A ++ DM +HG PD+ ++N +E ++ M G PN
Sbjct: 310 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 369
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
+YTI++ K + A+E ++ M G+ PD Y+ LI G +L ++ ++M
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
++G D TYN +I E R+ +M + +P + T++
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 489
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL-TP 514
+ M K + PD ++++L+ GL GK AC + EE++ +G+ TP
Sbjct: 490 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 113/247 (45%), Gaps = 1/247 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y ++++ + +N + +M H + +L L ++ K DAI F MK
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G + + +++ K +S+E A + S + ++ + L+ G+ + D
Sbjct: 361 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 420
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+++++M+E G PD +YN+ I+ + K ++ +M +N P+ T+ ++M
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ A V+++M GI PD Y+ LI L G+ ++AC E+M +G+
Sbjct: 481 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Query: 409 RDVVTYN 415
++ YN
Sbjct: 541 TPLIDYN 547
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 198/413 (47%), Gaps = 2/413 (0%)
Query: 103 VEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTG 162
VE + ++ E + + LD +S+ + ++L+RF + PAF FF WA + G
Sbjct: 130 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 189
Query: 163 YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
+ H YN M+ IL K++ F+ + ++EEM +G +T+ T T ++ A + + A+
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAV 248
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWC 282
F MK++ + +N L+D+L + + A + + K N ++ +L+NGWC
Sbjct: 249 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 308
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
RVRN +A ++ DM +HG PD+ ++N +E ++ M G PN
Sbjct: 309 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 368
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
+YTI++ K + A+E ++ M G+ PD Y+ LI G +L ++ ++M
Sbjct: 369 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 428
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
++G D TYN +I E R+ +M + +P + T++
Sbjct: 429 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 488
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL-TP 514
+ M K + PD ++++L+ GL GK AC + EE++ +G+ TP
Sbjct: 489 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 113/247 (45%), Gaps = 1/247 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y ++++ + +N + +M H + +L L ++ K DAI F MK
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G + + +++ K +S+E A + S + ++ + L+ G+ + D
Sbjct: 360 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 419
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+++++M+E G PD +YN+ I+ + K ++ +M +N P+ T+ ++M
Sbjct: 420 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ A V+++M GI PD Y+ LI L G+ ++AC E+M +G+
Sbjct: 480 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Query: 409 RDVVTYN 415
++ YN
Sbjct: 540 TPLIDYN 546
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 216/444 (48%), Gaps = 12/444 (2%)
Query: 103 VEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTG 162
V IS L+K+ S + + L+ + SN V +IL R NDW AF FF WA Q G
Sbjct: 97 VGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG 156
Query: 163 YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHE-GYVTLYTMTKVLRRLTKAGKHEDA 221
Y S Y+ MI ILGK + FD W L++EM K V T+ ++R+ A
Sbjct: 157 YVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKA 216
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGW 281
I F K F ++M L+ AL + +V A ++ K P ++ SFNI++NGW
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGW 276
Query: 282 CRVRNF-DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C V +A +V +M G DV SY+S I Y KV ++ + M + P+
Sbjct: 277 CNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD 336
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSH-GIVPDTPFYSSLIFILGKAGRLKDACDVF 399
Y V+ AL KA +S+A + + M+ GI P+ Y+SLI L KA + ++A VF
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
++M ++G+ + TY+ + E LL +M + C+P +ETY
Sbjct: 397 DEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGAL 519
+ M + + PDL ++ +++HGL +GK++ A +++E+ +G+ P
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNEN-- 511
Query: 520 KQLVKDLEAKSMLKEKEHIEKLMT 543
V+D+ +S K++ E+ +T
Sbjct: 512 ---VEDM-IQSWFSGKQYAEQRIT 531
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 209/427 (48%), Gaps = 9/427 (2%)
Query: 103 VEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTG 162
VE +L++ HS + AL+ G ++ ++++L R + + FF WA Q
Sbjct: 83 VEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 142
Query: 163 YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL-RRLTKAGKHEDA 221
Y HS E+Y M+ IL K + F VW L+EEM K + + VL +R A + A
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 202
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGW 281
I M +FG + D L+DAL K SV+ A + + + P+N F L+ GW
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGW 262
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
CRV +A+ V+ M E GF PD+ Y + + Y + +L +M G PNA
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
YT+++ AL K ++ +A++V+ +M+ + D Y++L+ K G++ V +D
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREET---ALRLLKEMEERSCKPDLETYHPXXXXXXX 458
M K+G++ +TY + AH ++E+ L L+++M + PD+ Y+
Sbjct: 383 MIKKGLMPSELTY---MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACK 439
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL--TPRH 516
M +N LSP + TF ++++GL G L A F+E+++RGL ++
Sbjct: 440 LGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQY 499
Query: 517 GALKQLV 523
G LK L+
Sbjct: 500 GTLKLLL 506
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 40/371 (10%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+E ++ ++D L K + +L E+M + V L T +L + GK +A
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEA 271
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
+M E G + D L+ + A+ +L + + N+ + +L+
Sbjct: 272 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 331
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C+V ++A KV +M+ + DV +Y + + +C K VL++M + G P+
Sbjct: 332 LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS 391
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
+TY +M A K + LE+ EKM+ PD Y+ +I + K G +K+A ++
Sbjct: 392 ELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 451
Query: 401 DMPKQGIVRDVVTYNTMI----STACA-----HSREETA-----------LRLL------ 434
+M + G+ V T+ MI S C H +E L+LL
Sbjct: 452 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLK 511
Query: 435 -KEME-----------ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLG 482
K++E + +C+ ++ ++ M + D P
Sbjct: 512 DKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPD 571
Query: 483 TFSLLVHGLRK 493
TF+ L+ GL+K
Sbjct: 572 TFAKLMKGLKK 582
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 237/521 (45%), Gaps = 34/521 (6%)
Query: 46 SPELPAWVKFSDNPTPPNADSDDDFVIPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEA 105
SP LP FS + T +D ++D ++ V I +P VE
Sbjct: 18 SPLLPK--TFSTSATSLLSDHENDESAATITAAVSVPI--------SPLLTPEDTQTVEK 67
Query: 106 ISTLLKEHHS-----------SPELVAQAL-----DGHGFQVSNSSVQQILKRFNN--DW 147
+++K+H+ +P L AL QVS S V+ ++++ +
Sbjct: 68 FHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHG 127
Query: 148 VP---AFGFFTWAKTQTGYEH-SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
+P + FF WA ++ Y+H SP YN MID+ GK + FDL W L++ M +++
Sbjct: 128 IPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIE 187
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T T ++RR +AG +A+ F RM+++G D A ++++ L + A
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
K + + L+ GWCR +A KV ++MK G P+V++Y+ I++ C
Sbjct: 248 KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ V +M ++GC PNA+T+ +M KAG+ + L+VY +MK G PDT Y+ LI
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
+ L++A V M K+ + T+NT+ A R+ +M E C+
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
P+ TY+ + M ++ P++ T+ LLV G ++A
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
Query: 504 FEELI-SRGLTPRHGALKQLVKDLEAKSMLKEKEH-IEKLM 542
F+E++ + LTP + ++ L LK+ E +EK++
Sbjct: 488 FKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 37/249 (14%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G E + Y+++ID L + ++ +M T ++R KAG+ E
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKV 344
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL-LEFKSLIPLNSGSFN----- 275
+ + +MK+ G + DT N L++A + ++E+A VL K +N+ +FN
Sbjct: 345 LQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY 404
Query: 276 ------------------------------ILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
ILM + ++ D K+ ++M + P+
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGC-PPNAVTYTIVMFALGKAGQLSQALEVY 364
V +Y + +C + ++ +EM E C P+ Y +V+ L +AGQL + E+
Sbjct: 465 VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELV 524
Query: 365 EKMKSHGIV 373
EKM G+V
Sbjct: 525 EKMIQKGLV 533
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 210/434 (48%), Gaps = 16/434 (3%)
Query: 122 QALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILG--- 178
+ALD ++ V +IL+R + AF FFTWA Q Y H P YN MIDIL
Sbjct: 114 KALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTK 173
Query: 179 -KSKNFDLVWELVEEMAKHEGYVTLY-TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM- 235
K+K F +V ++++ M ++ V L + ++LR+ + ++ + F + K V
Sbjct: 174 YKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCE--RYLTHVQKFAKRKRIRVKTQ 231
Query: 236 -DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVM 294
+ A NML+DAL K V+ +L + + ++ +FN+L GWCRVR+ +A K++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 295 EDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP---PNAVTYTIVMFAL 351
E+M E G P+ F+Y + I+++C + + + M G P A T+ +++ AL
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVAL 351
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
K + + E+ +M S G +PD Y +I + A ++ +A ++M +G D+
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
VTYN + C + + + AL+L M E C P ++TY+
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE 471
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEA--- 528
M K D D+ T+ +++GL + AC EE++++GL + + L
Sbjct: 472 MDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGN 531
Query: 529 -KSMLKEKEHIEKL 541
K++ K EH++K
Sbjct: 532 LKAIHKVSEHMKKF 545
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 67/427 (15%)
Query: 120 VAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGK 179
V L+ ++S + ++++LK+ +N V A F WA+ Q G++H+ YN +I+ LGK
Sbjct: 81 VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGK 140
Query: 180 SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
K F L+W LV++M K + ++ T + RR +A K ++AI AF +M+EFG M+++
Sbjct: 141 IKQFKLIWSLVDDM-KAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSD 199
Query: 240 LNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKE 299
N ++D L K RN A+KV + MK+
Sbjct: 200 FNRMLDTLSKS----------------------------------RNVGDAQKVFDKMKK 225
Query: 300 HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQ 359
F PD+ SY +E + + + +VD+V EM + G P+ V Y I++ A KA + +
Sbjct: 226 KRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEE 285
Query: 360 ALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIS 419
A+ + +M+ P + SLI LG +L DA + FE G + TYN ++
Sbjct: 286 AIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVG 345
Query: 420 TACAHSREETALRLLKEM--------------------------------EERSCKPDLE 447
C R E A + + EM + SC+P +
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVS 405
Query: 448 TYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
TY + M + P + FS L+ L KLD AC +F E+
Sbjct: 406 TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Query: 508 ISRGLTP 514
+ G+ P
Sbjct: 466 LDVGIRP 472
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 6/245 (2%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+E Y ++I+ K+K ++ EM + + + ++ L K DA
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMN 279
+ F R K G ++ N L+ A +E A+ + + K + P N+ +++I+++
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGP-NARTYDIILH 380
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
R++ +A +V + M P V +Y + +C+ + ++ +EM G P
Sbjct: 381 HLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLP 437
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
++ ++ AL +L +A E + +M GI P +S L L GR D+
Sbjct: 438 GMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Query: 400 EDMPK 404
M +
Sbjct: 498 VKMDR 502
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 222/461 (48%), Gaps = 11/461 (2%)
Query: 61 PPNADSDDDFVIPSLAHWVDAHILDA--KPKLVTPTFNENKHDYVEA--ISTLLKEHH-S 115
PP + + + S H++ H L + P FN++K D A + ++K H S
Sbjct: 33 PPETPNHKNNITLSRFHFLGTHFLHSLGAPDKFPNRFNDDK-DKQSALDVHNIIKHHRGS 91
Query: 116 SPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMID 175
SPE + + LD G ++ V +++ R +DW PA+ Q+ + S LYN ++D
Sbjct: 92 SPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILD 151
Query: 176 ILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM 235
+LGK + F+ ++ +EM+K +G+V T +L R A K ++A+ F R KEFG+D
Sbjct: 152 VLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDD 211
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVME 295
D A + L+ L + VE A + + + + N+++NGWC + N +A++ +
Sbjct: 212 DLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWK 271
Query: 296 DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
D+ PDV SY + I + K ++ M + P+ V+ AL
Sbjct: 272 DIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKK 331
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG--IVRDVVT 413
++ +ALEV+ ++ G P+ Y+SL+ L K R + ++ E+M +G + VT
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 414 YNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF 473
++ ++ + R + +L+ M + C+ + Y+ M
Sbjct: 392 FSYLLKYS---QRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEME 448
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
++ L PD T+++ +HGL GK+ A S+F+E++S+G+ P
Sbjct: 449 RSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y MI+ L K EL M + V+ L + +A+ FR +
Sbjct: 285 YGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREIS 344
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK----SLIPLNSGSFNILMNGWCRVR 285
E G D + N L+ L K E ++ E + S P N +F+ L+ R +
Sbjct: 345 EKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSP-NDVTFSYLLKYSQRSK 403
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+ D V+E M ++ YN Y KV ++ EM +G P+ TYT
Sbjct: 404 DVDI---VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYT 460
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
I + L G++ +AL +++M S G+VP+
Sbjct: 461 IRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 1/218 (0%)
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
YN ++ + F + QV +EMS+ N TY +++ A ++ +A+ V+E+ K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
GI D + L+ L + ++ A +F ++ D+ N +++ C
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVLGNVH 264
Query: 429 TALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A R K++ C+PD+ +Y M+ +PD+ + ++
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 489 HGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
L ++ A F E+ +G P L+K L
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHL 362
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 208/463 (44%), Gaps = 12/463 (2%)
Query: 93 PTFNENKHDYVEAISTLLKEHHSSP-ELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAF 151
P N + IS LL+ P + ALD G + S V + R ++ +
Sbjct: 60 PQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLH 119
Query: 152 GFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELV-EEMAKHEG--YVTLYTMTKV 208
F WA+ + G+ SP L++ +++ L K++ F++ W LV + + EG V+ T +
Sbjct: 120 SVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVL 179
Query: 209 LRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA----LNMLMDALVKGNSVEHAHGVLLEFK 264
+RR +AG + AI AF + + +A L +L+DAL K V A L
Sbjct: 180 IRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIG 239
Query: 265 SLIPLN----SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
+ N FNIL+NGW R R QA K+ E+MK P V +Y + IE YC +
Sbjct: 240 GTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMR 299
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ +VLEEM N + + ++ LG+AG+LS+AL + E+ P Y+
Sbjct: 300 RVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYN 359
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
SL+ KAG L A + + M +G+ TYN H++ E + L ++ E
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
PD TYH + M + PDL T ++L+H L + L+ A
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 501 CSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
F+ + RG+ P++ K + L +K M + + LM+
Sbjct: 480 FEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMS 522
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 5/204 (2%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
++N +ID LG++ ++E E T+ T +++ KAG A + M
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG---SFNILMNGWCRVR 285
GVD T N K N E G+ L FK + +S ++++++ C
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEE--GMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
A +V ++MK G PD+ + I C + + + + G P +T+
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFK 499
Query: 346 IVMFALGKAGQLSQALEVYEKMKS 369
++ L G A + M S
Sbjct: 500 MIDNGLRSKGMSDMAKRLSSLMSS 523
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 175/360 (48%), Gaps = 7/360 (1%)
Query: 136 VQQILKRFNNDWVPAFGFFTWAKTQ-TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMA 194
V +LKR N A FF + Y H ++L IDI + VW L+ M
Sbjct: 59 VNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118
Query: 195 KHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE 254
+ T V R AGK + A+ F M E G D A+ N ++D L K VE
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVE 178
Query: 255 HAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE 314
A+ + + +++ ++N+++NGWC ++ +A +V+++M E G P++ +YN+ ++
Sbjct: 179 KAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLK 238
Query: 315 SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP 374
+ R + EM + C + VTYT V+ G AG++ +A V+++M G++P
Sbjct: 239 GFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP 298
Query: 375 DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST---ACAHSREETAL 431
Y+++I +L K +++A +FE+M ++G +V TYN +I A SR E
Sbjct: 299 SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE--- 355
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
L++ ME C+P+ +TY+ E M D P+L T+++L+ G+
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 2/260 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N ++D+L KSK + +EL + + V T +L + A+ + M
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
E G++ + N ++ + + HA LE K ++ ++ +++G+
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+AR V ++M G +P V +YN+ I+ C + + EEM G PN TY +++
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L AG+ S+ E+ ++M++ G P+ Y+ +I + ++ A +FE M +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 409 RDVVTYNTMISTACAHSREE 428
++ TYN +IS R E
Sbjct: 403 PNLDTYNILISGMFVRKRSE 422
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+ T+ IV AG+ +A++++ M HG D +++++ +L K+ R++ A ++
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
F + + V D VTYN +++ C R AL +LKEM ER P+L TY+
Sbjct: 184 FRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGA 518
M K D D+ T++ +VHG +G++ A + F+E+I G+ P
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 519 LKQLVKDLEAK 529
+++ L K
Sbjct: 303 YNAMIQVLCKK 313
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 170/347 (48%), Gaps = 6/347 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN+MI K+ + +++ M+ VT T +LR L +GK + A+ RM
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNT---ILRSLCDSGKLKQAMEVLDRML 231
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCRVRNF 287
+ D +L++A + + V HA +L E + P + ++N+L+NG C+
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP-DVVTYNVLVNGICKEGRL 290
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D+A K + DM G P+V ++N + S C + +++L +M G P+ VT+ I+
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ L + G L +A+++ EKM HG P++ Y+ L+ K ++ A + E M +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
D+VTYNTM++ C + E A+ +L ++ + C P L TY+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M DL PD T+S LV GL + GK+D A FF E G+ P
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 36/350 (10%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN++++ + K D + + +M + T +LR + G+ DA M
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G N+L++ L + + A +L + + NS S+N L++G+C+ + D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A + +E M G PD+ +YN+ + + C D ++L ++S GC P +TY V+
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L KAG+ +A+++ ++M++ + PDT YSSL+ L + G++ +A F + + GI
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+ VT+N+++ C + + A+ L M R CKP+ +Y
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY------------------- 557
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGA 518
++L+ GL G A EL ++GL + A
Sbjct: 558 ----------------TILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 38/232 (16%)
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
R ++ K +E+M HG VPD+ + I +C RK ++LE + +G P+ +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
TY +++ KAG+++ AL V ++M + PD Y++++ L +G+LK A +V + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
++ DV+TY +I C S A++LL EM +R C PD+ TY+
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN------------ 278
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+LV+G+ K G+LD A F ++ S G P
Sbjct: 279 -----------------------VLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 3/252 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G+ S +N++I+ L + +++E+M +H + +L K K +
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNIL 277
AI RM G D N ++ AL K VE A +L L K P+ ++N +
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI-TYNTV 455
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
++G + +A K++++M+ PD +Y+S + + + + E G
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
PNAVT+ +M L K+ Q +A++ M + G P+ Y+ LI L G K+A +
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575
Query: 398 VFEDMPKQGIVR 409
+ ++ +G+++
Sbjct: 576 LLNELCNKGLMK 587
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 175/371 (47%), Gaps = 1/371 (0%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G+ H Y+ +I L KS+NFD V +++ + +++ KAG +
Sbjct: 74 EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVD 133
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
AI F ++ F +LN L++ LV +E A K + + NS SFNIL+
Sbjct: 134 KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILI 193
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
G+ +++ A KV ++M E P V +YNS I C + D K +LE+M +
Sbjct: 194 KGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIR 253
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PNAVT+ ++M L G+ ++A ++ M+ G P Y L+ LGK GR+ +A +
Sbjct: 254 PNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLL 313
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
+M K+ I DVV YN +++ C R A R+L EM+ + CKP+ TY
Sbjct: 314 LGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGA 518
M + P TF +V GL K G LDHAC E + + L+ GA
Sbjct: 374 IEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGA 433
Query: 519 LKQLVKDLEAK 529
+ L+ DL K
Sbjct: 434 WQNLLSDLCIK 444
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%)
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
++A + +E GF D SY+S I ++F VDQ+L + + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ GKAG + +A++V+ K+ S V ++LI +L G L+ A F+ +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
+ V++N +I E A ++ EM E +P + TY+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLE 527
E M K + P+ TF LL+ GL G+ + A ++ RG P L+ DL
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 528 AKSMLKE 534
+ + E
Sbjct: 303 KRGRIDE 309
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 4/281 (1%)
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
N + A FF AK +S +N++I +++ ++ +EM + E ++
Sbjct: 164 NGELEKAKSFFDGAKDMRLRPNSVS-FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVV 222
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--L 261
T ++ L + A + M + + + +LM L A ++ +
Sbjct: 223 TYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM 282
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
E++ P ++ ILM+ + D+A+ ++ +MK+ PDV YN + C +
Sbjct: 283 EYRGCKP-GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ +VL EM GC PNA TY +++ + L V M + P +
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
++ L K G L AC V E M K+ + + ++S C
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 190/385 (49%), Gaps = 6/385 (1%)
Query: 134 SSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM 193
S V +L+ +++ V A FF WA Q Y H P +Y M+++L K+K ++ M
Sbjct: 175 SQVCAVLRSQDDERV-ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLM 233
Query: 194 AKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSV 253
+ Y T ++V+ ++AG+ DA+ M+ GV+ + N +D V+ N +
Sbjct: 234 KRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRL 293
Query: 254 EHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNS 311
E A L ++ ++P N ++N ++ G+C + ++A +++EDM G +PD SY +
Sbjct: 294 EKALRFLERMQVVGIVP-NVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 312 FIESYCHDKDFRKVDQVLEEMS-ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
+ C +K +V ++++M+ E+G P+ VTY ++ L K +AL + +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG-IVRDVVTYNTMISTACAHSREET 429
G D YS+++ L K GR+ +A D+ +M +G DVVTY +++ C +
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 430 ALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVH 489
A +LL+ M KP+ +Y ++ SP+ T+S+++H
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 490 GLRKSGKLDHACSFFEELISRGLTP 514
GLR+ GKL AC E++ +G P
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFP 557
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 160/344 (46%), Gaps = 3/344 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
Y ++ L K K V +L+++MAK G V T ++ LTK ++A+ +
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRN 286
+E G +D + ++ AL K + A ++ E K P + ++ ++NG+CR+
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
D+A+K+++ M HG P+ SY + + C + +++ E+ PN++TY++
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
+M L + G+LS+A +V +M G P + L+ L + GR +A E+ +G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
+VV + T+I C + + AL +L +M + D+ TY
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
+ M + P T+ ++H + GK+D + E++ISR
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 11/287 (3%)
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
+F+ +M + R A KV+ M+ G P++ N+ I+ + K + LE M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
G PN VTY ++ ++ +A+E+ E M S G +PD Y +++ L K R+
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 393 KDACDVFEDMPKQ-GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+ D+ + M K+ G+V D VTYNT+I H + AL LK+ +E+ + D Y
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 452 XXXXXXXXXXXXXXXXXXEHMF-KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
M K PD+ T++ +V+G + G++D A + + +
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 511 GLTPRHGALKQLV-------KDLEAKSMLKEKEHIEKLMTPPSIRFT 550
G P + L+ K LEA+ M+ E E +P SI ++
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE--EHWWSPNSITYS 528
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 150/355 (42%), Gaps = 8/355 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +++ + D +L++ M H + T +L + + GK +A +
Sbjct: 457 YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 516
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE--FKSLIPLNSGSFNILMNGWCRVRNF 287
E ++ +++M L + + A V+ E K P N+L+ CR
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP-GPVEINLLLQSLCRDGRT 575
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ARK ME+ G +V ++ + I +C + + VL++M + TYT +
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 635
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ LGK G++++A E+ +KM GI P Y ++I + G++ D + E M +
Sbjct: 636 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQK 695
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
R + YN +I C + E A LL ++ + + D +T +
Sbjct: 696 CRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYK 753
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG-LTPRHGALKQ 521
MF +L PD+ L L GK+D A L+ RG ++P+ +LKQ
Sbjct: 754 VACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ--SLKQ 806
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 10/251 (3%)
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
D Y S +E K + +VL M G ++ VM + +AGQL AL+V
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 365 EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAH 424
M+ G+ P+ ++ I + +A RL+ A E M GIV +VVTYN MI C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 425 SREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFK-NDLSPDLGT 483
R E A+ LL++M + C PD +Y+ + M K + L PD T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 484 FSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL-------EAKSMLKEKE 536
++ L+H L K D A F ++ +G +V L EAK ++ E
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI--NE 443
Query: 537 HIEKLMTPPSI 547
+ K PP +
Sbjct: 444 MLSKGHCPPDV 454
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 191/395 (48%), Gaps = 25/395 (6%)
Query: 135 SVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM- 193
+V + L ++NDW A FF W + ++G+ H+ E +N +IDILGK F++ W L+ M
Sbjct: 49 TVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMI 108
Query: 194 AKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSV 253
E T V +R A ++AI A+ ++ +F + +T+ N L+DAL
Sbjct: 109 GNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALC----- 162
Query: 254 EHAHGVLLE----FKSLIP-----LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVP 304
EH H V E K++I N+ N+++ GW ++ + + ++ + M G
Sbjct: 163 EHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTK 222
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
D+FSY+ +++ C K ++ +EM + V Y V+ A+G + + + V+
Sbjct: 223 DLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVF 282
Query: 365 EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAH 424
+M+ G P+ ++++I +L + GR++DA + ++MPK+G D +TY C
Sbjct: 283 REMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLF 336
Query: 425 SREET---ALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDL 481
SR E L L M +P ++TY + M ++ +PD
Sbjct: 337 SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDS 396
Query: 482 GTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
++ ++ L + G LD A + EE+I RGL+PR
Sbjct: 397 AAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 143/343 (41%), Gaps = 53/343 (15%)
Query: 77 HWVDAHI----LDAKPKLVTPTFN-ENKHDYVEAISTLLKEHH--SSPELV-AQALDGHG 128
+V AH+ +DA KL FN ++ + + L + H + EL + + G+G
Sbjct: 126 RYVTAHLVQEAIDAYDKL--DDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNG 183
Query: 129 FQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWE 188
F VSN+ + ++ R W+K G+ + Y +D G +K+
Sbjct: 184 FSVSNTKIHNLILR------------GWSK--LGWWGKCKEYWKKMDTEGVTKD------ 223
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
L++ + + + K+GK A+ ++ MK + +D A N ++ A+
Sbjct: 224 -------------LFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIG 270
Query: 249 KGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
VE V E + N + N ++ C A +++++M + G PD
Sbjct: 271 ASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSI 330
Query: 308 SYNSFIESYCHDKDFRKVDQVLE---EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
+Y C K ++L M +G P TY ++M + G L L V+
Sbjct: 331 TY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVW 384
Query: 365 EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ MK G PD+ Y+++I L + G L A + E+M ++G+
Sbjct: 385 KTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 178/354 (50%), Gaps = 5/354 (1%)
Query: 98 NKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWA 157
N VE +S++L+ P +AL G ++ Q+LK+ N D+ A GFF W
Sbjct: 297 NSGHIVENVSSVLRRFRWGPA-AEEALQNLGLRIDAYQANQVLKQMN-DYGNALGFFYWL 354
Query: 158 KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
K Q G++H Y M+ LG++K F + +L++EM + T +++ +A
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFN 275
+A+ F +M+E G D L+D K ++ A + ++ L P ++ +++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP-DTFTYS 473
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
+++N + + A K+ +M + G P++ +YN ++ + ++++ ++ +M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
G P+ VTY+IVM LG G L +A V+ +M+ +PD P Y L+ + GKAG ++ A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
++ M G+ +V T N+++ST ++ A LL+ M +P L+TY
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 11/312 (3%)
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LE 262
++ VLRR E+A ++ G+ +D N ++ + N +A G L+
Sbjct: 305 VSSVLRRFRWGPAAEEA------LQNLGLRIDAYQANQVLKQM---NDYGNALGFFYWLK 355
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+ + ++ ++ R + F K++++M G P+ +YN I SY
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
+ V +M E GC P+ VTY ++ KAG L A+++Y++M++ G+ PDT YS +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
I LGKAG L A +F +M QG ++VTYN M+ + AL+L ++M+
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
+PD TY M + + PD + LLV K+G ++ A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 503 FFEELISRGLTP 514
+++ ++ GL P
Sbjct: 596 WYQAMLHAGLRP 607
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 178/354 (50%), Gaps = 5/354 (1%)
Query: 98 NKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWA 157
N VE +S++L+ P +AL G ++ Q+LK+ N D+ A GFF W
Sbjct: 297 NSGHIVENVSSVLRRFRWGPA-AEEALQNLGLRIDAYQANQVLKQMN-DYGNALGFFYWL 354
Query: 158 KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
K Q G++H Y M+ LG++K F + +L++EM + T +++ +A
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFN 275
+A+ F +M+E G D L+D K ++ A + ++ L P ++ +++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP-DTFTYS 473
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
+++N + + A K+ +M + G P++ +YN ++ + ++++ ++ +M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
G P+ VTY+IVM LG G L +A V+ +M+ +PD P Y L+ + GKAG ++ A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
++ M G+ +V T N+++ST ++ A LL+ M +P L+TY
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 11/312 (3%)
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LE 262
++ VLRR E+A ++ G+ +D N ++ + N +A G L+
Sbjct: 305 VSSVLRRFRWGPAAEEA------LQNLGLRIDAYQANQVLKQM---NDYGNALGFFYWLK 355
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+ + ++ ++ R + F K++++M G P+ +YN I SY
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
+ V +M E GC P+ VTY ++ KAG L A+++Y++M++ G+ PDT YS +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
I LGKAG L A +F +M QG ++VTYN M+ + AL+L ++M+
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
+PD TY M + + PD + LLV K+G ++ A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 503 FFEELISRGLTP 514
+++ ++ GL P
Sbjct: 596 WYQAMLHAGLRP 607
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 178/354 (50%), Gaps = 5/354 (1%)
Query: 98 NKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWA 157
N VE +S++L+ P +AL G ++ Q+LK+ N D+ A GFF W
Sbjct: 297 NSGHIVENVSSVLRRFRWGPA-AEEALQNLGLRIDAYQANQVLKQMN-DYGNALGFFYWL 354
Query: 158 KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
K Q G++H Y M+ LG++K F + +L++EM + T +++ +A
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFN 275
+A+ F +M+E G D L+D K ++ A + ++ L P ++ +++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP-DTFTYS 473
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
+++N + + A K+ +M + G P++ +YN ++ + ++++ ++ +M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
G P+ VTY+IVM LG G L +A V+ +M+ +PD P Y L+ + GKAG ++ A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
++ M G+ +V T N+++ST ++ A LL+ M +P L+TY
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 11/312 (3%)
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LE 262
++ VLRR E+A ++ G+ +D N ++ + N +A G L+
Sbjct: 305 VSSVLRRFRWGPAAEEA------LQNLGLRIDAYQANQVLKQM---NDYGNALGFFYWLK 355
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+ + ++ ++ R + F K++++M G P+ +YN I SY
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
+ V +M E GC P+ VTY ++ KAG L A+++Y++M++ G+ PDT YS +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
I LGKAG L A +F +M QG ++VTYN M+ + AL+L ++M+
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
+PD TY M + + PD + LLV K+G ++ A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 503 FFEELISRGLTP 514
+++ ++ GL P
Sbjct: 596 WYQAMLHAGLRP 607
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 1/370 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN++I + N D+ L ++M + T ++ K K +D R M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G++ + + N++++ L + ++ VL E + L+ ++N L+ G+C+ NF
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
QA + +M HG P V +Y S I S C + + + L++M G PN TYT ++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ G +++A V +M +G P Y++LI G+++DA V EDM ++G+
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
DVV+Y+T++S C + ALR+ +EM E+ KPD TY
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEA 528
E M + L PD T++ L++ G L+ A E++ +G+ P L+ L
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 529 KSMLKEKEHI 538
+S +E + +
Sbjct: 568 QSRTREAKRL 577
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 174/399 (43%), Gaps = 18/399 (4%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
F + GY YN +I K NF + EM +H ++ T T ++ +
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLN 270
KAG A+ +M+ G+ + L+D + + A+ VL E P +
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP-S 414
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
++N L+NG C + A V+EDMKE G PDV SY++ + +C D + +V
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
EM E G P+ +TY+ ++ + + +A ++YE+M G+ PD Y++LI G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
L+ A + +M ++G++ DVVTY+ +I+ SR A RLL ++ P TYH
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 451 PXXXXXXXXXXXXXXXXXX---------------EHMFKNDLSPDLGTFSLLVHGLRKSG 495
E M + PD +++++HG ++G
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 496 KLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+ A + ++E++ G + LVK L + + E
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 190/446 (42%), Gaps = 34/446 (7%)
Query: 135 SVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMA 194
+ +L + ND F WA + + L IL K K + L E++A
Sbjct: 50 AASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITL--HILTKFKLYKTAQILAEDVA 107
Query: 195 K---------------HEGYVTLYTMTKVLRRLTKAGKH----EDAIAAFRRMKEFGVDM 235
E Y Y+ + V + K+ + A++ + G
Sbjct: 108 AKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP 167
Query: 236 DTAALNMLMDALVKGN-SVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFDQARKV 293
+ N ++DA ++ ++ A V E +S + N ++NIL+ G+C N D A +
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD---QVLEEMSENGCPPNAVTYTIVMFA 350
+ M+ G +P+V +YN+ I+ YC RK+D ++L M+ G PN ++Y +V+
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYC---KLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 351 LGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD 410
L + G++ + V +M G D Y++LI K G A + +M + G+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 411 VVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXE 470
V+TY ++I + C A+ L +M R P+ TY
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 471 HMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP----RHGALKQLVKDL 526
M N SP + T++ L++G +GK++ A + E++ +GL+P L +
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 527 EAKSMLK-EKEHIEKLMTPPSIRFTS 551
+ L+ ++E +EK + P +I ++S
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSS 490
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 197/435 (45%), Gaps = 45/435 (10%)
Query: 150 AFGFFTWAKT-QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKV 208
++ F T K + GYE ++N +++ L ELV+ M + TL T+ +
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 209 LRRLTKAGKHEDAIAAFRRMKEFG-----------------------------------V 233
+ L GK DA+ RM E G +
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 234 DMDTAALNMLMDALVKGNSVEHAHGVLLE-----FKSLIPLNSGSFNILMNGWCRVRNFD 288
+D ++++D L K S+++A + E FK+ I ++N L+ G+C +D
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII----TYNTLIGGFCNAGRWD 315
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
K++ DM + P+V +++ I+S+ + R+ DQ+L+EM + G PN +TY ++
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
K +L +A+++ + M S G PD ++ LI KA R+ D ++F +M +G++
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+ VTYNT++ C + E A +L +EM R +PD+ +Y
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEA 528
+ K+ + D+G + +++HG+ + K+D A F L +G+ A ++ +L
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 529 KSMLKEKEHIEKLMT 543
K L + + + + MT
Sbjct: 556 KDSLSKADILFRKMT 570
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 164/360 (45%), Gaps = 7/360 (1%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF F + + G++ YN +I + +D +L+ +M K + + T + ++
Sbjct: 282 AFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLI 267
K GK +A + M + G+ +T N L+D K N +E A + L+ K
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
P + +FNIL+NG+C+ D ++ +M G + + +YN+ ++ +C +
Sbjct: 401 P-DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
+ +EM P+ V+Y I++ L G+L +ALE++ K++ + D Y +I +
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
A ++ DA D+F +P +G+ D YN MIS C A L ++M E PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 448 TYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
TY+ E M + D+ T ++++ L SG+LD SF + L
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDK--SFLDML 636
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 170/385 (44%), Gaps = 11/385 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N + + K+K ++LV L ++M ++YT++ ++ + K A + ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGV---LLEFK---SLIPLNSGSFNILMNGWCR 283
+ G + DT N L++ L V A + ++E +LI LN+ L+NG C
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT-----LVNGLCL 205
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
A +++ M E GF P+ +Y + C ++L +M E +AV
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
Y+I++ L K G L A ++ +M+ G D Y++LI AGR D + DM
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
K+ I +VVT++ +I + + A +LLKEM +R P+ TY+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
+ M PD+ TF++L++G K+ ++D F E+ RG+ LV
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 524 KDLEAKSMLKEKEHIEKLMTPPSIR 548
+ L+ + + + M +R
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVR 470
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 156/328 (47%), Gaps = 1/328 (0%)
Query: 188 ELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL 247
+L +M + T+ ++ + K ++E +A ++M+ G+ L+++++
Sbjct: 74 DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 248 VKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
+ + +A + + L ++ FN L+NG C +A ++++ M E G P +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
+ N+ + C + +++ M E G PN VTY V+ + K+GQ + A+E+ K
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M+ I D YS +I L K G L +A ++F +M +G D++TYNT+I C R
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ +LL++M +R P++ T+ + M + ++P+ T++
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTP 514
L+ G K +L+ A + +IS+G P
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDP 401
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%)
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D A + DM + +P V +N + K + V + ++M G + T +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + +LS A K+ G PDT +++L+ L R+ +A ++ + M + G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
++T NT+++ C + + A+ L+ M E +P+ TY P
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
M + ++ D +S+++ GL K G LD+A + F E+ +G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 178/392 (45%), Gaps = 42/392 (10%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ S + Y+ ++ LGK ++ D V L++EM +YT T +R L +AGK +A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK---------SLIPL--- 269
+RM + G D +L+DAL ++ A V + K + I L
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 270 ------------------------NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
+ +F IL++ C+ NF +A ++ M++ G +P+
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLE---EMSENGCPPNAVTYTIVMFALGKAGQLSQALE 362
+ +YN+ I C ++D LE M G P A TY + + GK+G ALE
Sbjct: 398 LHTYNTLI---CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 363 VYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
+EKMK+ GI P+ ++ ++ L KAGR ++A +F + G+V D VTYN M+
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 423 AHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLG 482
+ A++LL EM E C+PD+ + M + L P +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 483 TFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
T++ L+ GL K+GK+ A FE ++ +G P
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 145/314 (46%), Gaps = 3/314 (0%)
Query: 212 LTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS-LIPLN 270
L +A E A F ++K G D A N L+DA K ++ + E + N
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 271 SGSFNILMNGWCRVRNFDQARKVMED-MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
+ + NI+++G + N D A + D M + F P +Y I+ + Q+
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E M + GC PN Y I++ GKAG+ A ++++M G+ PD YS L+ L
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME-ERSCKPDLET 448
GR+ + F+++ + G+ DVV YN +I+ R E AL L EM+ R PDL T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
Y+ + + L P++ TF+ L+ G SGK +HA + ++ ++
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 509 SRGLTPRHGALKQL 522
+ G +P G +QL
Sbjct: 1095 TGGFSPNTGTYEQL 1108
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
++N+L+ G + A+ V +K G +PDV +YN +++Y ++ ++ +EM
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVY-EKMKSHGIVPDTPFYSSLIFILGKAGR 391
S + C N +T+ IV+ L KAG + AL++Y + M P Y LI L K+GR
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
L +A +FE M G + YN +I+ + A L K M + +PDL+TY
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL-ISR 510
+ + ++ L+PD+ ++L+++GL KS +L+ A F E+ SR
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 511 GLTPRHGALKQLVKDLEAKSMLKEKEHI 538
G+TP L+ +L M++E I
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 15/290 (5%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR-M 228
YN ++D GKS D ++EL +EM+ HE T V+ L KAG +DA+ + M
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL----NSGSFNILMNGWCRV 284
+ L+D L K + A + F+ ++ N +NIL+NG+ +
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQL---FEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL---EEMSENGCPPNA 341
D A + + M + G PD+ +Y+ ++ C +VD+ L +E+ E+G P+
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM---VGRVDEGLHYFKELKESGLNPDV 996
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMK-SHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
V Y +++ LGK+ +L +AL ++ +MK S GI PD Y+SLI LG AG +++A ++
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
++ + G+ +V T+N +I + E A + + M P+ TY
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 176/374 (47%), Gaps = 23/374 (6%)
Query: 139 ILKRFNN----DWVPAFGFFTWAKTQTGYEHSPEL--YNLMIDILGKSKNFDLVWELVEE 192
+L RF++ D V F W++ + H P++ + +++D L K+ NF ++ ++
Sbjct: 334 LLDRFSDNRDLDSVKQF----WSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 193 MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS 252
M L+T ++ L + + +DA+ F M+ GV + +D K
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 253 VEHAHGVLLEFKS------LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
A + K+ ++ N+ +++ G R +A+++ +K+ G VPD
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR-----EAKQIFYGLKDIGLVPDS 503
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
+YN ++ Y + + ++L EM ENGC P+ + ++ L KA ++ +A +++ +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
MK + P Y++L+ LGK G++++A ++FE M ++G + +T+NT+ C +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
AL++L +M + C PD+ TY+ H K + PD T
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF-HQMKKLVYPDFVTLCT 682
Query: 487 LVHGLRKSGKLDHA 500
L+ G+ K+ ++ A
Sbjct: 683 LLPGVVKASLIEDA 696
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 179/423 (42%), Gaps = 45/423 (10%)
Query: 132 SNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDIL---GKSKNFDLVWE 188
S+ V + LK F D +F +F H+ E N M++ L GK + V++
Sbjct: 84 SSEEVTRGLKSFP-DTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFD 142
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
L+++ T T + + L+ G + A A R+M+EFG ++ + N L+ L+
Sbjct: 143 LMQKRIIKRDTNTYLT---IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 249 KGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
K A V + + P + +++ LM G + R+ D ++++M+ G P+V
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRP-SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV 258
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
+++ I + ++L+ M + GC P+ VTYT+++ AL A +L A EV+EK
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 367 MKS-----------------------------------HGIVPDTPFYSSLIFILGKAGR 391
MK+ G VPD ++ L+ L KAG
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+A D + M QGI+ ++ TYNT+I R + AL L ME KP TY
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
E M ++P++ + ++ L K+G+ A F L G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 512 LTP 514
L P
Sbjct: 499 LVP 501
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 198/487 (40%), Gaps = 58/487 (11%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHSSPELVA--QALDGHGFQVSNSSVQQILKRFNNDW 147
L+ + ++ D + +KE P +V L G G N +Q+ ++ F
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG---KNGKIQEAIELFE--- 597
Query: 148 VPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTK 207
Q G + +N + D L K+ L +++ +M ++T
Sbjct: 598 ---------GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF---- 263
++ L K G+ ++A+ F +MK+ V D L L+ +VK + +E A+ ++ F
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 264 ---------KSLIPL--------NSGSFN--ILMNGWCR---------VR------NFDQ 289
+ LI N+ SF+ ++ NG CR +R N
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG 767
Query: 290 ARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
AR + E K+ G P + +YN I V ++ GC P+ TY ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED-MPKQGI 407
A GK+G++ + E+Y++M +H +T ++ +I L KAG + DA D++ D M +
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
TY +I R A +L + M + C+P+ Y+
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLE 527
+ M K + PDL T+S+LV L G++D +F+EL GL P ++ L
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 528 AKSMLKE 534
L+E
Sbjct: 1008 KSHRLEE 1014
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 33/221 (14%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G + +YN++I+ GK+ D L + M K L T + ++ L G+ ++
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGW 281
+ F+ +KE G++ D N++++ L K + +E A + E K+
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT---------------- 1024
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
G PD+++YNS I + + ++ E+ G PN
Sbjct: 1025 -----------------SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
T+ ++ +G+ A VY+ M + G P+T Y L
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 182/383 (47%), Gaps = 9/383 (2%)
Query: 171 NLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
N+++ K + ++EM+ +G+ YT ++ L KAG + AI M
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
+ G D D N ++ L K V+ A VL + + P N+ ++N L++ C+
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP-NTVTYNTLISTLCKENQV 381
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
++A ++ + G +PDV ++NS I+ C ++ R ++ EEM GC P+ TY ++
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ +L G+L +AL + ++M+ G Y++LI KA + ++A ++F++M G+
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
R+ VTYNT+I C R E A +L+ +M KPD TY+
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLE 527
+ M N PD+ T+ L+ GL K+G+++ A + +G+ A +++ L
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 528 AKSMLKE-----KEHIEKLMTPP 545
K E +E +E+ PP
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPP 644
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 189/406 (46%), Gaps = 7/406 (1%)
Query: 142 RFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVT 201
R D A F A + + P LY ++ LG+S +FD + +++E+M +
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG 117
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRM-KEFGVDMDTAALNMLMDALVKGNS---VEHAH 257
T ++ + ++ ++ M EFG+ DT N +++ LV GNS VE +H
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 258 GVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
+ + I + +FN+L+ CR A ++EDM +G VPD ++ + ++ Y
Sbjct: 178 AKMSVWG--IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH-GIVPDT 376
+ D ++ E+M E GC + V+ +++ K G++ AL ++M + G PD
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
+++L+ L KAG +K A ++ + M ++G DV TYN++IS C + A+ +L +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
M R C P+ TY+ + + PD+ TF+ L+ GL +
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
A FEE+ S+G P L+ L +K L E ++ K M
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 4/377 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N++I L ++ ++E+M + T T V++ + G + A+ +M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS---LIPLNSGSFNILMNGWCRVRN 286
EFG ++N+++ K VE A + E + P + +FN L+NG C+ +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTLVNGLCKAGH 310
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
A ++M+ M + G+ PDV++YNS I C + ++ +VL++M C PN VTY
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ L K Q+ +A E+ + S GI+PD ++SLI L + A ++FE+M +G
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
D TYN +I + C+ + + AL +LK+ME C + TY+
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+ M + +S + T++ L+ GL KS +++ A +++I G P L+
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 527 EAKSMLKEKEHIEKLMT 543
+K+ I + MT
Sbjct: 551 CRGGDIKKAADIVQAMT 567
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 192/446 (43%), Gaps = 44/446 (9%)
Query: 128 GFQVSNSSVQQILKRFNNDWV--PAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDL 185
G SN SV I+ F + A F Q G+ +N +++ L K+ +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 186 VWELVEEMAKHEGY-VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM 244
E+++ M + EGY +YT V+ L K G+ ++A+ +M +T N L+
Sbjct: 314 AIEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 245 DALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGF 302
L K N VE A + +L K ++P + +FN L+ G C RN A ++ E+M+ G
Sbjct: 373 STLCKENQVEEATELARVLTSKGILP-DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 303 VPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALE 362
PD F+YN I+S C + +L++M +GC + +TY ++ KA + +A E
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 363 VYEKMKSHGIV-----------------------------------PDTPFYSSLIFILG 387
++++M+ HG+ PD Y+SL+
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
+ G +K A D+ + M G D+VTY T+IS C R E A +LL+ ++ +
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 448 TYHPXXXXXXXXXXXXXXXXXXEHMF-KNDLSPDLGTFSLLVHGL-RKSGKLDHACSFFE 505
Y+P M +N+ PD ++ ++ GL G + A F
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 506 ELISRGLTPRHGALKQLVKDLEAKSM 531
EL+ +G P +L L + L SM
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGLLTLSM 697
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 3/304 (0%)
Query: 247 LVKGNSVEHAHGVLLEFKS-LIPLNSGSFNILMNGWCRVRNFDQARKVMEDM-KEHGFVP 304
L + S + +L + KS + + +F IL+ + + D+ V++ M E G P
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKP 152
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
D YN + + V+ +MS G P+ T+ +++ AL +A QL A+ +
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 365 EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAH 424
E M S+G+VPD +++++ + G L A + E M + G V+ N ++ C
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272
Query: 425 SREETALRLLKEMEER-SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGT 483
R E AL ++EM + PD T++ + M + PD+ T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 484 FSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
++ ++ GL K G++ A +++I+R +P L+ L ++ ++E + +++T
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 544 PPSI 547
I
Sbjct: 393 SKGI 396
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 156/363 (42%), Gaps = 15/363 (4%)
Query: 89 KLVTPTFNENKHDYVEAISTLLKEHH--SSPELVAQALDGHGFQ----VSNSSVQQILKR 142
+++T + N Y ISTL KE+ + EL A+ L G NS +Q +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 143 FNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTL 202
N+ A F +++ G E YN++ID L D ++++M ++
Sbjct: 414 RNHRV--AMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 203 YTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL-- 260
T ++ KA K +A F M+ GV ++ N L+D L K VE A ++
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
+ + P + ++N L+ +CR + +A +++ M +G PD+ +Y + I C
Sbjct: 531 MIMEGQKP-DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
++L + G Y V+ L + + ++A+ ++ +M P
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Query: 381 SLIF--ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
++F + G +++A D ++ ++G V + + + S EET ++L+ +
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709
Query: 439 ERS 441
+++
Sbjct: 710 QKA 712
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 178/396 (44%), Gaps = 9/396 (2%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ +N ++ + S +F+ W E K + + +Y+ +++ +AG+ E +
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKS 182
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
+ EFG + L+D K +E A + E L + N ++ +L+NG
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ Q ++ E M+E G P++++YN + C D + QV +EM E G N
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VTY ++ L + +L++A +V ++MKS GI P+ Y++LI G+L A +
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
D+ +G+ +VTYN ++S C A +++KEMEER KP TY
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
M + L PD+ T+S+L+HG G+++ A F+ ++ + P
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 521 QLV-------KDLEAKSMLKEKEHIEKLMTPPSIRF 549
++ A +LKE E E S R+
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 161/336 (47%), Gaps = 3/336 (0%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
FF K G + Y ++I+ L K+ +E+ E+M + + LYT V+ +L
Sbjct: 221 FFEMGKL--GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS-LIPLNS 271
K G+ +DA F M+E GV + N L+ L + + A+ V+ + KS I N
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++N L++G+C V +A + D+K G P + +YN + +C D ++++E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M E G P+ VTYTI++ ++ + +A+++ M+ G+VPD YS LI G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+ +A +F+ M ++ + V YNTMI C AL+LLKEMEE+ P++ +Y
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
E M + + P SL+
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%)
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNG 280
+I+ F M + G + N L+ +V +S E KS + L+ SF IL+ G
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C +++ ++ ++ E GF P+V Y + I+ C + K + EM + G N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TYT+++ L K G Q E+YEKM+ G+ P+ Y+ ++ L K GR KDA VF+
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
+M ++G+ ++VTYNT+I C + A +++ +M+ P+L TY+
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ LSP L T+++LV G + G A +E+ RG+ P
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 185/382 (48%), Gaps = 5/382 (1%)
Query: 165 HSPELY--NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
H P+L N +++ L S L+++M ++ T VL + K+G+ A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNG 280
R+M+E + +D ++++D L K S+++A + +E K I N ++NIL+ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGG 307
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+C +D K++ DM + P+V +++ I+S+ + R+ +++ +EM G P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
+TYT ++ K L +A ++ + M S G P+ ++ LI KA R+ D ++F
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
M +G+V D VTYNT+I C + A L +EM R P++ TY
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
E + K+ + D+G +++++HG+ + K+D A F L +G+ P
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 521 QLVKDLEAKSMLKEKEHIEKLM 542
++ L K L E E + + M
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKM 569
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 4/303 (1%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF F + + G + YN++I + +D +L+ +M K + + T + ++
Sbjct: 282 AFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLI 267
K GK +A + M G+ DT L+D K N ++ A+ + L+ K
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
P N +FNIL+NG+C+ D ++ M G V D +YN+ I+ +C +
Sbjct: 401 P-NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
+ +EM PPN VTY I++ L G+ +ALE++EK++ + D Y+ +I +
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
A ++ DA D+F +P +G+ V TYN MI C A L ++MEE PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 448 TYH 450
TY+
Sbjct: 580 TYN 582
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 171/364 (46%), Gaps = 8/364 (2%)
Query: 152 GFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRR 211
GF ++ Y L + ++DI D +L +M T+ +++
Sbjct: 45 GFSAFSDRNLSYRE--RLRSGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSA 97
Query: 212 LTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLN 270
+ K +++ +A ++M+ G+ + L+++++ + + A + + L N
Sbjct: 98 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
+ +F+ L+NG C +A ++++ M E G PD+ + N+ + C + +++
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
+M E GC PNAVTY V+ + K+GQ + A+E+ KM+ I D YS +I L K G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
L +A ++F +M +GI +++TYN +I C R + +LL++M +R P++ T+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
+ M ++PD T++ L+ G K LD A + ++S+
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 511 GLTP 514
G P
Sbjct: 398 GCDP 401
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 1/250 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +ID K + D ++V+ M + T ++ KA + +D + FR+M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
GV DT N L+ + + A + E S +P N ++ IL++G C +
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A ++ E +++ D+ YN I C+ + + G P TY I++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L K G LS+A ++ KM+ G PD Y+ LI G + + E++ + G
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 409 RDVVTYNTMI 418
D T +I
Sbjct: 611 VDASTIKMVI 620
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 5/242 (2%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G + + +N++I+ K+ D EL +M+ T +++ + GK A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNG 280
F+ M V + +L+D L E A + + KS + L+ G +NI+++G
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C D A + + G P V +YN I C + + + +M E+G P+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TY I++ A G ++++++ E++K G D +I +L GRLK + F
Sbjct: 578 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKS---FL 633
Query: 401 DM 402
DM
Sbjct: 634 DM 635
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 175/357 (49%), Gaps = 9/357 (2%)
Query: 97 ENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRF---NNDWVPAFGF 153
E + D E + ++ + EL ++L G +S + ++LKR + + + F
Sbjct: 36 EEEGDDAETVFRMINGSNLQVEL-KESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEF 94
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWEL-VEEMAKHEGYVTLYTMTKVLRRL 212
+ +A G+ HS + M+ ILG+++ FD +WEL +E K ++ TM VL R+
Sbjct: 95 YRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRV 154
Query: 213 TKAGKHEDAIAAFRRMKEFGVDM-DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNS 271
K + +F + K D DTA N L+ L + S+ A V K +
Sbjct: 155 AKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDL 214
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
+FNIL++GW ++ ++A E+MK G PDV +YNS I+ YC D++ K +++++
Sbjct: 215 QTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDK 271
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M E P+ +TYT V+ LG GQ +A EV ++MK +G PD Y++ I A R
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
L DA + ++M K+G+ + TYN + + L M C P+ ++
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQS 388
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 193/392 (49%), Gaps = 14/392 (3%)
Query: 66 SDDDFVIPSLAHWV--DAHILDAKPKLV-TPTFNENKHDYVEAISTLLKEH---HSSPEL 119
SDD +I S+ + ++ P+ TP + N VE +S++L+ H++ E
Sbjct: 257 SDDRTIISSVEGFGKPSREMMKVTPRTAPTPRQHCNPGYVVENVSSILRRFKWGHAAEE- 315
Query: 120 VAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGK 179
AL GF++ Q+LK+ +N + A GFF W K Q G++H Y M+ LG+
Sbjct: 316 ---ALHNFGFRMDAYQANQVLKQMDN-YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 371
Query: 180 SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
+K F + +L++EM + T +++ +A ++A+ F +M+E G + D
Sbjct: 372 AKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 240 LNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
L+D K ++ A + ++ L P ++ ++++++N + + A ++ +M
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSP-DTFTYSVIINCLGKAGHLPAAHRLFCEM 490
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
G P++ ++N I + +++ ++ +M G P+ VTY+IVM LG G L
Sbjct: 491 VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFL 550
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
+A V+ +M+ VPD P Y L+ + GKAG + A ++ M + G+ +V T N++
Sbjct: 551 EEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSL 610
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETY 449
+ST R A LL+ M P L+TY
Sbjct: 611 LSTFLRVHRMSEAYNLLQSMLALGLHPSLQTY 642
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 151/319 (47%), Gaps = 12/319 (3%)
Query: 198 GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
GYV + ++ +LRR E+A + FG MD N ++ + ++ +A
Sbjct: 294 GYV-VENVSSILRRFKWGHAAEEA------LHNFGFRMDAYQANQVLKQM---DNYANAL 343
Query: 258 GVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES 315
G L+ + + ++ ++ R + F + K++++M G P+ +YN I S
Sbjct: 344 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS 403
Query: 316 YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
Y ++ V +M E GC P+ VTY ++ KAG L A+++Y++M+ G+ PD
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 376 TPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLK 435
T YS +I LGKAG L A +F +M QG ++VT+N MI+ ETAL+L +
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYR 523
Query: 436 EMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSG 495
+M+ +PD TY M + + PD + LLV K+G
Sbjct: 524 DMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 496 KLDHACSFFEELISRGLTP 514
+D A +++ ++ GL P
Sbjct: 584 NVDKAWQWYQAMLQAGLRP 602
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
++ GF D +Y + + + K F +++++L+EM +GC PN VTY ++ + G+A L
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
+A+ V+ +M+ G PD Y +LI I KAG L A D+++ M + G+ D TY+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
I+ A RL EM + C
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGC----------------------------------- 495
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEH 537
+P+L TF++++ K+ + A + ++ + G P +++ L L+E E
Sbjct: 496 TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEG 555
Query: 538 I 538
+
Sbjct: 556 V 556
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 172/359 (47%), Gaps = 5/359 (1%)
Query: 158 KTQTGYEHSPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKA 215
K G + P++ Y ++ L K + F++ E+++EM + ++ ++ L K
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
Query: 216 GKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL--NSGS 273
GK E+A+ +R+ +FGV + N L+D+L KG A +L + I L N +
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE-LLFDRMGKIGLRPNDVT 404
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
++IL++ +CR D A + +M + G V+ YNS I +C D + + EM
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
P VTYT +M G++++AL +Y +M GI P +++L+ L +AG ++
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
DA +F +M + + + VTYN MI C A LKEM E+ PD +Y P
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
+ + K + + ++ L+HG + GKL+ A S +E++ RG+
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 158/385 (41%), Gaps = 5/385 (1%)
Query: 166 SPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
SP L YN +ID L K + F L + M K T + ++ + GK + A++
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGW 281
M + G+ + N L++ K + A G + E K L P ++ LM G+
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP-TVVTYTSLMGGY 482
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
C ++A ++ +M G P ++++ + + R ++ EM+E PN
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
VTY +++ + G +S+A E ++M GIVPDT Y LI L G+ +A +
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX 461
+ K + + Y ++ C + E AL + +EM +R DL Y
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 462 XXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQ 521
+ M L PD ++ ++ K+G A ++ +I+ G P
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 522 LVKDLEAKSMLKEKEHIEKLMTPPS 546
++ L + E E + M P S
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVS 747
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 169/399 (42%), Gaps = 40/399 (10%)
Query: 167 PELYNL--MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAA 224
PE+ L ++ L K ++F L EL +M +Y T V+R L + A
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 225 FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWC 282
M+ G D++ N+L+D L K V A G+ L K L P + ++ L+ G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP-DVVTYCTLVYGLC 308
Query: 283 RVRNFDQARKVMEDM-----------------------------------KEHGFVPDVF 307
+V+ F+ ++M++M + G P++F
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
YN+ I+S C + F + + + + M + G PN VTY+I++ + G+L AL +M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
G+ Y+SLI K G + A +M + + VVTY +++ C+ +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
ALRL EM + P + T+ M + ++ P+ T++++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+ G + G + A F +E+ +G+ P + + L+ L
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 165/431 (38%), Gaps = 36/431 (8%)
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
F TG + S YN +I+ K + + EM + T+ T T ++
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSG 272
GK A+ + M G+ L+ L + + A + E + N
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
++N+++ G+C + +A + +++M E G VPD +SY I C + ++ +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGI-------------------- 372
+ C N + YT ++ + G+L +AL V ++M G+
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 373 ---------------VPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
PD Y+S+I K G K+A +++ M +G V + VTY +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
I+ C A L +M+ S P+ TY + L
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEH 537
+ T+++L+ G + G+++ A +I G++P ++ +L ++ +K+
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 538 IEKLMTPPSIR 548
+ MT IR
Sbjct: 844 LWNSMTEKGIR 854
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 151/387 (39%), Gaps = 71/387 (18%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
++YT T +L L +AG DA+ F M E+ V + N++++ + + A L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 261 LEF--KSLIP----------------------------------LNSGSFNILMNGWCRV 284
E K ++P LN + L++G+CR
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
++A V ++M + G D+ Y I+ KD + +L+EM + G P+ V Y
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA---CDVFE- 400
T ++ A K G +A +++ M + G VP+ Y+++I L KAG + +A C +
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 401 ----------------------DMPK---------QGIVRDVVTYNTMISTACAHSREET 429
DM K +G++ + TYN +I C R E
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEE 805
Query: 430 ALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVH 489
A L+ M PD TY M + + PD ++ L+H
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 490 GLRKSGKLDHACSFFEELISRGLTPRH 516
G +G++ A E++ +GL P +
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 148/332 (44%), Gaps = 1/332 (0%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T++ +L L K A+ F M G+ D ++ +L + + A ++
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 264 KSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
++ +N +N+L++G C+ + +A + +D+ PDV +Y + + C ++F
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
++++EM P+ + ++ L K G++ +AL + +++ G+ P+ Y++L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
I L K + +A +F+ M K G+ + VTY+ +I C + +TAL L EM +
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
K + Y+ M L P + T++ L+ G GK++ A
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 503 FFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+ E+ +G+ P L+ L ++++
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 192/466 (41%), Gaps = 45/466 (9%)
Query: 102 YVEAISTLLKEHHS-----SPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTW 156
+V+A+ +++ S S ELV++ L V++IL +D FF +
Sbjct: 41 FVDAVKRIVRGKRSWEIALSSELVSRRL-------KTVHVEEILIGTIDDPKLGLRFFNF 93
Query: 157 AKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAG 216
G++HS + ++I L K+ +L W + + L +A
Sbjct: 94 LGLHRGFDHSTASFCILIHALVKA---NLFWP---------------ASSLLQTLLLRAL 135
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNS----- 271
K D E +++ ++L+ V+ V GVL+ FK +I S
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRV--LDGVLV-FKMMITKVSLLPEV 192
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
+ + L++G + R+F A ++ DM G PDV+ Y I S C KD + +++
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M GC N V Y +++ L K ++ +A+ + + + + PD Y +L++ L K
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+ ++ ++M ++++ + E AL L+K + + P+L Y+
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
+ M K L P+ T+S+L+ + GKLD A SF E++ G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 512 LT----PRHGALKQLVK--DLEAKSMLKEKEHIEKLMTPPSIRFTS 551
L P + + K D+ A E I K + P + +TS
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFM-AEMINKKLEPTVVTYTS 477
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 9/212 (4%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+Y MID K+ +F + + + M T T V+ L KAG +A +M
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 229 KEFGVDMDTAALNMLMDALVKG-----NSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCR 283
+ + +D L KG +VE + +L K L+ N+ ++N+L+ G+CR
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL---KGLLA-NTATYNMLIRGFCR 799
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
++A +++ M G PD +Y + I C D +K ++ M+E G P+ V
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
Y ++ AG++ +A E+ +M G++P+
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 38/280 (13%)
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE--- 262
T +L + GK E+A++ + M + GVD+D +L+D +K + G+L E
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 263 ---------FKSLIP------------------LNSG------SFNILMNGWCRVRNFDQ 289
+ S+I +N G ++ ++NG C+ ++
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDK-DFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A + M+ VP+ +Y F++ + D +K + L G N TY +++
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLLANTATYNMLI 794
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ G++ +A E+ +M G+ PD Y+++I L + +K A +++ M ++GI
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
D V YNT+I C A L EM + P+ +T
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 11/267 (4%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
Q G + Y ++ID K K+ L + L++EM T ++ +K G
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIP--LNSGSF 274
++A + M G + +++ L K V A + + + S +P + G F
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 275 -NILMNGWCRVRNFDQARKV-MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
+IL G D + V + + G + + +YN I +C + +++ M
Sbjct: 759 LDILTKG-----EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRM 813
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
+G P+ +TYT ++ L + + +A+E++ M GI PD Y++LI AG +
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMIS 419
A ++ +M +QG++ + T T S
Sbjct: 874 GKATELRNEMLRQGLIPNNKTSRTTTS 900
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 207/465 (44%), Gaps = 11/465 (2%)
Query: 84 LDAKPK---LVTPTFNENKHDYVEAISTLLKEHHSSPEL--VAQALDGHGFQVSNSSVQQ 138
+ AK K L P+ + K Y + +L+ + S P +A+ LD ++S +
Sbjct: 51 IKAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFAL 110
Query: 139 ILKRF--NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH 196
+ K F DW + F + + Q + + +Y +MI +LG+ D E+ +EM
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 197 EGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGN-SVEH 255
++++ T ++ + G++E ++ RMK + N +++A +G E
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 256 AHGVLLEFK-SLIPLNSGSFNILMNGWCRVRNF-DQARKVMEDMKEHGFVPDVFSYNSFI 313
G+ E + I + ++N L++ C +R D+A V M + G VPD+ +Y+ +
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
E++ + KV +L EM+ G P+ +Y +++ A K+G + +A+ V+ +M++ G
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
P+ YS L+ + G++GR D +F +M D TYN +I + + L
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
+M E + +PD+ETY ++M ND+ P ++ ++ +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 494 SGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
+ + A F + G P L+ ++KE E I
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAI 514
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 3/361 (0%)
Query: 167 PEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAA 224
P+L Y+ +++ GK + + V +L+ EMA + + +L K+G ++A+
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 225 FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCR 283
F +M+ G + ++L++ + + + LE KS ++ ++NIL+ +
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
F + + DM E PD+ +Y I + ++L+ M+ N P++
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
YT V+ A G+A +AL + M G P + SL++ + G +K++ + +
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
GI R+ T+N I + E A++ +ME+ C PD T
Sbjct: 520 DSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVD 579
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
E M +D+ P + + +++ K+ + D EE++S ++ H + Q++
Sbjct: 580 ECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMI 639
Query: 524 K 524
K
Sbjct: 640 K 640
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 135/321 (42%), Gaps = 51/321 (15%)
Query: 170 YNLMIDILGKSKNF--------DLVWELVE-EMAKHEG-------------------YVT 201
YN++I++ G+ F D+V E +E +M +EG Y+T
Sbjct: 390 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 449
Query: 202 LYTM-------TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE 254
+ T V+ +A +E+A+ AF M E G + + L+ + +G V+
Sbjct: 450 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
Query: 255 HAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFI 313
+ +L S IP N +FN + + + F++A K DM++ PD + + +
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
Y + + + EEM + P+ + Y +++ GK + E+ E+M S+ +
Sbjct: 570 SVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRV- 628
Query: 374 PDTPFYSSLIFILGK--AGRLKDACD------VFEDMPKQGIVRDVVTYNTMISTACAHS 425
S++ ++G+ G D + V + + +G + YN ++
Sbjct: 629 ------SNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLG 682
Query: 426 REETALRLLKEMEERSCKPDL 446
++E A R+L E +R P+L
Sbjct: 683 QKERAARVLNEATKRGLFPEL 703
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 193/427 (45%), Gaps = 26/427 (6%)
Query: 136 VQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAK 195
V+ +L + D++ + FF WAKT+ HS E + +++ L K++ F ++ ++
Sbjct: 84 VKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 196 HEG--------------YVTLYTMTKVLRRLTKAGKH----EDAIAAFRRMKEFGVDMDT 237
+ G Y + +V L K H +A F +MK++G
Sbjct: 144 NGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTV 203
Query: 238 AALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMED 296
+ N M +L+ V+ A E + I N + N++M+G+CR D+ ++++D
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
M+ GF SYN+ I +C ++ M ++G PN VT+ ++ +A +
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
L +A +V+ +MK+ + P+T Y++LI + G + A +EDM GI RD++TYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
+I C ++ A + +KE+++ + P+ T+ + M ++
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELI-------SRGLTPRHGALKQLVKDLEAK 529
P+ TF++LV ++ D A E++ SR + LK KD K
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 530 SMLKEKE 536
+L+E E
Sbjct: 504 KLLQEME 510
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 193/427 (45%), Gaps = 26/427 (6%)
Query: 136 VQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAK 195
V+ +L + D++ + FF WAKT+ HS E + +++ L K++ F ++ ++
Sbjct: 84 VKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 196 HEG--------------YVTLYTMTKVLRRLTKAGKH----EDAIAAFRRMKEFGVDMDT 237
+ G Y + +V L K H +A F +MK++G
Sbjct: 144 NGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTV 203
Query: 238 AALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMED 296
+ N M +L+ V+ A E + I N + N++M+G+CR D+ ++++D
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
M+ GF SYN+ I +C ++ M ++G PN VT+ ++ +A +
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
L +A +V+ +MK+ + P+T Y++LI + G + A +EDM GI RD++TYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
+I C ++ A + +KE+++ + P+ T+ + M ++
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELI-------SRGLTPRHGALKQLVKDLEAK 529
P+ TF++LV ++ D A E++ SR + LK KD K
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 530 SMLKEKE 536
+L+E E
Sbjct: 504 KLLQEME 510
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 190/417 (45%), Gaps = 43/417 (10%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
A+ FF W++ Q Y H+ E Y ++D+L +K+ D + + E+ K E +T+ ++
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 194
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLI 267
+ K G E+ + +R+MKE G++ N LM+ LV V+ A V ++E +
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK 254
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
P + ++N ++ G+C+ +A + + DM+ G D +Y + I++ D DF
Sbjct: 255 P-DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 328 VLEEMSENG--CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
+ +EM E G PP+A +++V+ L K G+L++ V+E M G P+ Y+ LI
Sbjct: 314 LYQEMDEKGIQVPPHA--FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL-------------- 431
K+G ++DA + M +G DVVTY+ +++ C + R E AL
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 432 ---------------------RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXE 470
RL +EM E+ C D Y+ +
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 471 HMFKND-LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
M + + + T+++L+ G+ K + + A ++ +I +G+TP + L L
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 190/444 (42%), Gaps = 5/444 (1%)
Query: 95 FNENKHDYVEAISTL-LKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGF 153
+ N YV + L L + V+ + F ++ S+ ++K F +
Sbjct: 148 YTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELL 207
Query: 154 FTWAKT-QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
+ W K + G E + YN +++ L + D + E M + T +++
Sbjct: 208 WVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGY 267
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNS 271
KAG+ + A+ R M+ G + D ++ A + + E + I +
Sbjct: 268 CKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPP 327
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
+F++++ G C+ ++ V E+M G P+V Y I+ Y ++L
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M + G P+ VTY++V+ L K G++ +AL+ + + G+ ++ FYSSLI LGKAGR
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM-EERSCKPDLETYH 450
+ +A +FE+M ++G RD YN +I H + + A+ L K M EE C + TY
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
+ M ++P F L GL SGK+ AC +EL
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Query: 511 GLTPRHGALKQLVKDLEAKSMLKE 534
G+ A + ++ L +KE
Sbjct: 568 GVI-LDAACEDMINTLCKAGRIKE 590
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G + P ++L+I L K + + + E M + + T ++ K+G E
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNIL 277
DAI RM + G D +++++ L K VE A F L +NS ++ L
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL-AINSMFYSSL 438
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS---- 333
++G + D+A ++ E+M E G D + YN+ I+++ RKVD+ +
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF---TKHRKVDEAIALFKRMEE 495
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL----------- 382
E GC TYTI++ + K + +AL++++ M GI P + +L
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVA 555
Query: 383 -----------------------IFILGKAGRLKDACDVFEDMPKQG 406
I L KAGR+K+AC + + + ++G
Sbjct: 556 RACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERG 602
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
K+ + ++ Y S ++ KD ++ V E+ + P ++ + GK G +
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
+ L V+ KMK +GI P Y+ L+ L A + A VFE M I D+VTYNTM
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
I C + + A+ L++ME R + D TY + M + +
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKS 530
FSL++ GL K GKL+ + FE +I +G P + A+ ++ D AKS
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP-NVAIYTVLIDGYAKS 375
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 174/375 (46%), Gaps = 9/375 (2%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTM-TKVLRR 211
F+W +Q GY HS ++Y ++I LG + F + L+ +M K EG V ++ ++R
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQM-KDEGIVFKESLFISIMRD 155
Query: 212 LTKAGKHEDAIAAFRRMKE-FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPL 269
KAG M+ + + + N++++ LV GN + A V + S IP
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 270 NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
+F ++M +C V D A ++ DM +HG VP+ Y + I S + Q+L
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
EEM GC P+A T+ V+ L K ++++A ++ +M G PD Y L+ L K
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM-EERSCKPDLET 448
GR+ A D+F +PK ++V +NT+I H R + A +L +M PD+ T
Sbjct: 336 GRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
Y+ M P++ ++++LV G K GK+D A + E+
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 509 SRGLTPRHGALKQLV 523
+ GL P L+
Sbjct: 452 ADGLKPNTVGFNCLI 466
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 173/405 (42%), Gaps = 41/405 (10%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
T+ G + +Y +I L K + +L+EEM T V+ L K +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNIL 277
+A RM G D LM+ L K V+ A + K I + FN L
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTL 359
Query: 278 MNGWCRVRNFDQARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
++G+ D A+ V+ DM +G VPDV +YNS I Y + +VL +M G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
C PN +YTI++ K G++ +A V +M + G+ P+T ++ LI K R+ +A
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM------------------- 437
++F +MP++G DV T+N++IS C + AL LL++M
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 438 -------EERSCKPDLE---------TYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDL 481
E R ++ TY+ E M ++ +P
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 482 GTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+ ++L++GL +SG ++ A F +E++ RG TP L+ L
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 158/371 (42%), Gaps = 4/371 (1%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRR 227
++N +I D ++ +M G V + T ++ K G A+
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMNGWCRVR 285
M+ G + + +L+D K ++ A+ VL E + L P N+ FN L++ +C+
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP-NTVGFNCLISAFCKEH 473
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+A ++ +M G PDV+++NS I C + + +L +M G N VTY
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++ A + G++ +A ++ +M G D Y+SLI L +AG + A +FE M +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G ++ N +I+ C E A+ KEM R PD+ T++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKD 525
+ + PD TF+ L+ L K G + AC +E I G P H L++
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 526 LEAKSMLKEKE 536
+ + L +
Sbjct: 714 IIPQETLDRRR 724
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 8/348 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM- 228
Y +++ L K D +L + K E + ++ G+ +DA A M
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPE----IVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRN 286
+G+ D N L+ K V A VL + K P N S+ IL++G+C++
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP-NVYSYTILVDGFCKLGK 439
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
D+A V+ +M G P+ +N I ++C + + ++ EM GC P+ T+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ L + ++ AL + M S G+V +T Y++LI + G +K+A + +M QG
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
D +TYN++I C + A L ++M P + +
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M +PD+ TF+ L++GL ++G+++ + F +L + G+ P
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 182/390 (46%), Gaps = 23/390 (5%)
Query: 148 VPAF----GFFTWAKT--QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVT 201
VP+F G W ++ ++ L N + DI+ D +L +M K + +
Sbjct: 27 VPSFFNLCGSGCWERSFASASGDYREILRNRLSDII----KVDDAVDLFGDMVKSRPFPS 82
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
+ K+L + K K E I+ +M+ G+ D ++ ++ + + + A VL
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 262 EFKSL------IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES 315
+ L + L+S L+NG+C + A +++ M E G+ PD F++ + I
Sbjct: 143 KMMKLGYEPDIVTLSS-----LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 316 -YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP 374
+ H+K V ++++M + GC P+ VTY V+ L K G + AL + +KM+ I
Sbjct: 198 LFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 375 DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
D Y+++I L K + DA ++F +M +GI DV TY+++IS C + R A RLL
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 435 KEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKS 494
+M ER P++ T+ + M K + PD+ T+S L++G
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 495 GKLDHACSFFEELISRGLTPRHGALKQLVK 524
+LD A FE +IS+ P L+K
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 5/358 (1%)
Query: 160 QTGYEHSPELYNL--MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
+ GYE P++ L +++ SK LV++M + +T T ++ L K
Sbjct: 146 KLGYE--PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNI 276
+A+A +M + G D +++ L K ++ A +L + K I + +N
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
+++G C+ ++ D A + +M G PDVF+Y+S I C+ + ++L +M E
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
PN VT++ ++ A K G+L +A ++Y++M I PD YSSLI RL +A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
+FE M + +VVTY+T+I C R E + L +EM +R + TY
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M + P++ T+++L+ GL K+GKL A FE L + P
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 157/338 (46%), Gaps = 2/338 (0%)
Query: 207 KVLR-RLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
++LR RL+ K +DA+ F M + N L+ A+ K N E + + ++
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 266 L-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
L I + +++I +N +CR A V+ M + G+ PD+ + +S + YCH K
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
++++M E G P+ T+T ++ L + S+A+ + ++M G PD Y +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
L K G + A + + M K I DVV YNT+I C + + AL L EM+ + +P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
D+ TY M + ++P++ TFS L+ K GKL A +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 505 EELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
+E+I R + P L+ L E +H+ +LM
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 190/455 (41%), Gaps = 54/455 (11%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVP 149
L+ F NK A+ + + P+LV + V + KR + D
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG----------TVVNGLCKRGDIDLAL 243
Query: 150 AFGFFTWAKTQTG-YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKV 208
+ K + G E +YN +ID L K K+ D L EM ++T + +
Sbjct: 244 SL----LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 209 LRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA------------ 256
+ L G+ DA M E ++ + + L+DA VK + A
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 257 ----------------HGVLLEFKSLIPL--------NSGSFNILMNGWCRVRNFDQARK 292
H L E K + L N +++ L+ G+C+ + ++ +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 293 VMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALG 352
+ +M + G V + +Y + I + +D V ++M G PN +TY I++ L
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 353 KAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV 412
K G+L++A+ V+E ++ + PD Y+ +I + KAG+++D ++F ++ +G+ +V+
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
YNTMIS C +E A LLK+M+E P+ TY+ + M
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ D T L+ + L G+LD SF + L
Sbjct: 600 RSCGFAGDASTIGLVTNMLH-DGRLDK--SFLDML 631
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 10/289 (3%)
Query: 271 SGSFN-ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
SG + IL N + D A + DM + P + +N + + F V +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E+M G + TY+I + + QLS AL V KM G PD SSL+ +
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
R+ DA + + M + G D T+ T+I H++ A+ L+ +M +R C+PDL TY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ M K + D+ ++ ++ GL K +D A + F E+ +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 510 RGLTPRHGALKQLVKDL-------EAKSMLKEKEHIEKLMTPPSIRFTS 551
+G+ P L+ L +A +L + IE+ + P + F++
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLL--SDMIERKINPNVVTFSA 333
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 168/340 (49%), Gaps = 9/340 (2%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE----- 262
VL+ + K+G+ A+ R+M+E + +D ++++D L K S+++A + E
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
FK+ I + + L+ G+C +D K++ DM + PDV ++++ I+ + +
Sbjct: 278 FKADIII----YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
R+ +++ +EM + G P+ VTYT ++ K QL +A + + M S G P+ ++ L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
I KA + D ++F M +G+V D VTYNT+I C + E A L +EM R
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
+PD+ +Y E + K+ + D+G +++++HG+ + K+D A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 503 FFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
F L +G+ P ++ L K L E + + + M
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 7/360 (1%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF F + + G++ +Y +I + +D +L+ +M K + + + ++
Sbjct: 266 AFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLI 267
K GK +A + M + G+ DT L+D K N ++ A+ +L + K
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
P N +FNIL+NG+C+ D ++ M G V D +YN+ I+ +C +
Sbjct: 385 P-NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
+ +EM P+ V+Y I++ L G+ +ALE++EK++ + D Y+ +I +
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
A ++ DA D+F +P +G+ DV TYN MI C A L ++MEE P+
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 448 TYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
TY+ E + + S D T ++V L G+L SF + L
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKK--SFLDML 620
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 153/345 (44%), Gaps = 34/345 (9%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
++ + ++ ++K +DLV +L ++M LYT++ ++ + K A +A ++
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
+ G + DT +F+ L+NG C +
Sbjct: 135 KLGYEPDTV----------------------------------TFSTLINGLCLEGRVSE 160
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A ++++ M E G P + + N+ + C + +++ M E G PN VTY V+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
+ K+GQ + A+E+ KM+ I D YS +I L K G L +A ++F +M +G
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
D++ Y T+I C R + +LL++M +R PD+ +
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M + +SPD T++ L+ G K +LD A + ++S+G P
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 40/304 (13%)
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D A + ++M P + ++ K + V + ++M G N T +I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + +LS A K+ G PDT +S+LI L GR+ +A ++ + M + G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
++T N +++ C + + A+ L+ M E +P+ TY P
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE--------------------- 506
M + + D +S+++ GL K G LD+A + F E
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 507 --------------LISRGLTPRHGALKQLVKDLEAKSMLKE-----KEHIEKLMTPPSI 547
+I R +TP A L+ + L+E KE I++ ++P ++
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 548 RFTS 551
+TS
Sbjct: 354 TYTS 357
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 175/383 (45%), Gaps = 23/383 (6%)
Query: 145 NDWVPAFGFFTWA-KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TL 202
N+ A GF+ +A K + +L + MI LG+ + + + E A GY T+
Sbjct: 210 NECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIA-KRIFETAFAGGYGNTV 268
Query: 203 YTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE 262
Y + ++ ++G HE+AI+ F MKE+G+ + N ++DA KG +E
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG---------ME 319
Query: 263 FKSL-----------IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNS 311
FK + + + +FN L+ R ++ AR + ++M DVFSYN+
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 312 FIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
+++ C ++L +M PN V+Y+ V+ KAG+ +AL ++ +M+ G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
I D Y++L+ I K GR ++A D+ +M GI +DVVTYN ++ + +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
++ EM+ P+L TY L D+ +S L+ L
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 492 RKSGKLDHACSFFEELISRGLTP 514
K+G + A S +E+ G++P
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISP 582
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 143/293 (48%), Gaps = 6/293 (2%)
Query: 163 YEHSPEL--YNLMIDILGKSK-NFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Y P L YN +ID GK F V + +EM ++ T +L ++ G E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNIL 277
A F M ++ D + N L+DA+ KG ++ A +L + K ++P N S++ +
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP-NVVSYSTV 415
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
++G+ + FD+A + +M+ G D SYN+ + Y + +L EM+ G
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
+ VTY ++ GK G+ + +V+ +MK ++P+ YS+LI K G K+A +
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+F + G+ DVV Y+ +I C + +A+ L+ EM + P++ TY+
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN ++D + K DL +E++ +M + + + V+ KAG+ ++A+ F M+
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
G+ +D + N L+ K E A +L E S+ I + ++N L+ G+ + +D
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+ +KV +MK +P++ +Y++ I+ Y +++ ++ E G + V Y+ ++
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
AL K G + A+ + ++M GI P+ Y+S+I G++ + + D
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 15/234 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN ++ GK +D V ++ EM + L T + ++ +K G +++A+ FR K
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G+ D + L+DAL K V A ++ E K I N ++N +++ + R D
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
++ D G +P ++S S + + +V Q+ +++ N T
Sbjct: 602 RS----ADYSNGGSLP----FSSSALSALTETEGNRVIQLFGQLT---TESNNRTTKDCE 650
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
+ +LS LEV+ KM I P+ +S+++ + +DA + E++
Sbjct: 651 EGMQ---ELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 175/385 (45%), Gaps = 19/385 (4%)
Query: 149 PAFGFFT-WAKTQTG--YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTM 205
P+F + W + +G Y++ N + D+ D L +M K + ++
Sbjct: 30 PSFSHCSFWVRDFSGVRYDYRKISINRLNDL-----KLDDAVNLFGDMVKSRPFPSIVEF 84
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
+K+L + K K + I+ +M+ G+ + ++L++ + + + A VL +
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMK 144
Query: 266 L------IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
L + LNS L+NG+C A ++ M E G+ PD F++N+ I
Sbjct: 145 LGYEPDIVTLNS-----LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+ +++ M GC P+ VTY IV+ L K G + AL + +KM+ I P Y
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+++I L + DA ++F +M +GI +VVTYN++I C + R A RLL +M E
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
R P++ T+ + M K + PD+ T+S L++G +LD
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 500 ACSFFEELISRGLTPRHGALKQLVK 524
A FE +IS+ P L+K
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIK 404
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 164/389 (42%), Gaps = 36/389 (9%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G H+ Y+++I+ + L ++ +M K + T+ +L + DA
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA------------------HGVL--- 260
++ +M E G D+ N L+ L + N A +G++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 261 --------LEFKSLIPLNSGS-------FNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
L L + G +N +++ C +N + A + +M G P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
V +YNS I C+ + ++L +M E PN VT++ ++ A K G+L +A ++Y+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
+M I PD YSSLI RL +A +FE M + +VVTYNT+I C
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 426 REETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFS 485
R + + L +EM +R + TY + M + + PD+ T+S
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 486 LLVHGLRKSGKLDHACSFFEELISRGLTP 514
+L+ GL +GK++ A FE L + P
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 36/327 (11%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Q E +YN +ID L KN + L EM + T ++R L G+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILM 278
DA M E ++ + + L+DA VK + A + E K I + +++ L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
NG+C D+A+ + E M P+V +YN+ I+ +C K + ++ EMS+ G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL---------------- 382
N VTYT ++ +A + A V+++M S G++PD YS L
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 383 -----------------IFILG--KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
I I G KAG+++D D+F + +G+ +VVTY TM+S C
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 424 HSREETALRLLKEMEERSCKPDLETYH 450
+E A L +EM+E PD TY+
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYN 575
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
++ +ID K +L +EM K ++T + ++ + ++A F M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
+ N L+ K V+ + E + L+ N+ ++ L++G+ + R
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIHGFFQAREC 447
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D A+ V + M G +PD+ +Y+ ++ C++ V E + + P+ TY I+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + KAG++ +++ + G+ P+ Y++++ + G ++A +F +M ++G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
+ D TYNT+I + + L++EM RSC+
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREM--RSCR 601
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I K+K D EL EM++ T T ++ +A + ++A F++M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
GV D ++L+D L VE A V+ E+ +S + + ++NI++ G C+
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETAL-VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ + + G P+V +Y + + +C + D + EM E G P++ TY +
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPD 375
+ A + G + + E+ +M+S V D
Sbjct: 578 IRAHLRDGDKAASAELIREMRSCRFVGD 605
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 176/397 (44%), Gaps = 5/397 (1%)
Query: 147 WVPAFGFFTW---AKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
W A F W + + ++ + + ILG+ + + +L++++ E + +
Sbjct: 152 WERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVR 211
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLE 262
T +L ++ GK+E AI F RMKE G N+++D K G S GVL E
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 263 FKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
+S + + + + +++ R +A++ ++K G+ P +YN+ ++ +
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ + VL+EM EN CP ++VTY ++ A +AG +A V E M G++P+ Y++
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
+I GKAG+ +A +F M + G V + TYN ++S SR +++L +M+
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
C P+ T++ M PD TF+ L+ + G A
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 502 SFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
+ E+ G L+ L K + E++
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENV 548
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 175/456 (38%), Gaps = 28/456 (6%)
Query: 102 YVEAISTLLK-EHHSSP-------ELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGF 153
Y EA+S L + E +S P ELVA + GF + V +++
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRA-GFSKEAAGVIEMM------------- 377
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
T+ G + Y +ID GK+ D +L M + T VL L
Sbjct: 378 -----TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSG 272
K + + I MK G + A N ++ + + V E KS +
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
+FN L++ + R + A K+ +M GF V +YN+ + + D+R + V+ +M
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
G P +Y++++ K G + ++K I P +L+ K L
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPX 452
+ F K G D+V +N+M+S ++ + A +L+ + E PDL TY+
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 453 XXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
+ + K+ L PDL +++ ++ G + G + A E+ RG+
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 513 TPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
P V A M E E + + M R
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 121/248 (48%), Gaps = 3/248 (1%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LL 261
T +L+ KAG + +A++ + M+E D+ N L+ A V+ + A GV ++
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
K ++P N+ ++ +++ + + D+A K+ MKE G VP+ +YN+ +
Sbjct: 378 TKKGVMP-NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
++ ++L +M NGC PN T+ ++ G G V+ +MKS G PD +++
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
LI G+ G DA ++ +M + G V TYN +++ + ++ +M+ +
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 442 CKPDLETY 449
KP +Y
Sbjct: 557 FKPTETSY 564
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 147/374 (39%), Gaps = 36/374 (9%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN ++ +LGK + + +++ +M + T +L G + FR MK
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK 483
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G + D N L+ A + S A + E ++ ++N L+N R ++
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 543
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
V+ DMK GF P SY+ ++ Y ++ ++++ + E P+ + ++
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A K L+ + + K HG PD ++S++ I + A + E + + G+
Sbjct: 604 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 409 RDVVT-----------------------------------YNTMISTACAHSREETALRL 433
D+VT YNT+I C + A+R+
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
L EM ER +P + TY+ E M KND P+ TF ++V G +
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Query: 494 SGKLDHACSFFEEL 507
+GK A F ++
Sbjct: 784 AGKYSEAMDFVSKI 797
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 195 KHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSV 253
K GY + +L T+ ++ A ++E G+ D N LMD V+
Sbjct: 623 KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC 682
Query: 254 EHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNS 311
A +L LE L P + S+N ++ G+CR +A +++ +M E G P +F+YN+
Sbjct: 683 WKAEEILKTLEKSQLKP-DLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNT 741
Query: 312 FIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS 369
F+ Y F +++ V+E M++N C PN +T+ +V+ +AG+ S+A++ K+K+
Sbjct: 742 FVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 129/283 (45%), Gaps = 5/283 (1%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGK 217
T+ G+ YN +++ L + ++ ++ +M K +G+ T + + +L+ K G
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDM-KSKGFKPTETSYSLMLQCYAKGGN 576
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFN 275
+ R+KE + L L+ A K ++ + FK P + FN
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKP-DMVIFN 635
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
+++ + R +DQA ++E ++E G PD+ +YNS ++ Y + K +++L+ + ++
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
P+ V+Y V+ + G + +A+ + +M GI P Y++ + G +
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
DV E M K + +T+ ++ C + A+ + +++
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 167/355 (47%), Gaps = 1/355 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ +ID L + D L +EM ++ T ++R L KAGK D + M
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
+ + N+L+D VK ++ A+ + E + I N ++N LM+G+C
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A +++ M + PD+ ++ S I+ YC K +V +S+ G NAVTY+I++
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
++G++ A E++++M SHG++PD Y L+ L G+L+ A ++FED+ K +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+V Y T+I C + E A L + + KP++ TY
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
M ++ +P+ T++ L+ + G L + EE+ S G + ++K ++
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 166/340 (48%), Gaps = 3/340 (0%)
Query: 177 LGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMD 236
+ ++K F+LV + +++ + +YT+ ++ + K A + ++ + G + D
Sbjct: 98 IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157
Query: 237 TAALNMLMDALVKGNSVEHAHGVLLE--FKSLIPLNSGSFNILMNGWCRVRNFDQARKVM 294
T N L+ L V A VL++ ++ + ++N ++NG CR + A ++
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAV-VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 295 EDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKA 354
M+E DVF+Y++ I+S C D + +EM G + VTY ++ L KA
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 355 GQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTY 414
G+ + + + M S IVP+ ++ L+ + K G+L++A +++++M +GI +++TY
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 415 NTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFK 474
NT++ C +R A +L M C PD+ T+ ++ K
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 475 NDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
L + T+S+LV G +SGK+ A F+E++S G+ P
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 156/351 (44%), Gaps = 1/351 (0%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
L +EM + +L ++ + + + + ++++ G+ + LN++++
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 249 KGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
+ A+ VL + L ++ +FN L+ G +A +++ M E+G PDV
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
+YNS + C D +L +M E + TY+ ++ +L + G + A+ ++++M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
++ GI Y+SL+ L KAG+ D + +DM + IV +V+T+N ++ +
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
+ A L KEM R P++ TY+ + M +N SPD+ TF+ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
+ G ++D F + RGL LV+ +K E +
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 155/355 (43%), Gaps = 69/355 (19%)
Query: 217 KHEDAIAAFRRM-------------KEFGVDMDTAALNMLMDAL--VKGNSVEHAHGVLL 261
K +DAIA F+ M + F T N+++D ++ N + H
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH------ 121
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
N + NI++N +CR A V+ + + G+ PD ++N+ I+ +
Sbjct: 122 --------NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ +++ M ENGC P+ VTY ++ + ++G S AL++ KM+ + D YS+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
+I L + G + A +F++M +GI VVTYN+++ C + LLK+M R
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR- 292
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
++ P++ TF++L+ K GKL A
Sbjct: 293 ----------------------------------EIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 502 SFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM-----TPPSIRFTS 551
++E+I+RG++P L+ ++ L E ++ LM +P + FTS
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
Query: 181 KNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAAL 240
K D ++ ++K T + +++ ++GK + A F+ M GV D
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 241 NMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKE 299
+L+D L +E A + + KS + L + ++ G C+ + A + +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 300 HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQ 359
G P+V +Y I C + + +L +M E+G PN TY ++ A + G L+
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 360 ALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
+ ++ E+MKS G D +I +L A
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 169/351 (48%), Gaps = 39/351 (11%)
Query: 177 LGKSKNFDLVWELV-EEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM 235
L ++ DL +E+V EE+ ++ ++ KAG+ E A A M + G +
Sbjct: 194 LCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEP 253
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVM 294
D N+L++ N ++ A GV+ E +S I L++ S+N L+ CRV + D+ M
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 295 -EDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
++M+ GF DV SY++ IE++C + RK ++ EEM + G N VTYT ++ A +
Sbjct: 314 VKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 354 AGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
G S A ++ ++M G+ PD FY++++ L K+G + A VF DM + I D ++
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 414 YNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF 473
YN++IS C R A++L ++M+ + C
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKEC------------------------------- 461
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
PD TF ++ GL + KL A +++++ +G T L+K
Sbjct: 462 ----CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 8/244 (3%)
Query: 212 LTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK----SLI 267
L K+G ++A+ F M+ + + N + LV+ + E A + + K SLI
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
P F ++G C+V+ FD ++ DM+ GF+PD++++N +++ C + Q
Sbjct: 79 PFTYSRF---ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
M + G P+ V+YTI++ L +AG+++ A+E++ M G+ PD ++L+ L
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 388 KAGRLKDACDVFEDMPKQGIVR-DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDL 446
A ++ A ++ + K V+ V YN +IS C R E A L M + C+PDL
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 447 ETYH 450
TY+
Sbjct: 256 VTYN 259
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 47/413 (11%)
Query: 156 WAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV--------------- 200
W G+ P Y+ I L K K FDL+ L+ +M + G++
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDM-ETLGFIPDIWAFNVYLDLLCR 126
Query: 201 ---------TLYTM------------TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
T + M T ++ L +AGK DA+ + M GV D A
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 240 LNMLMDALVKGNSVEHAHGVLLE-FKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
L+ L V+ A+ ++ E KS + L++ +N L++G+C+ ++A + M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
+ G PD+ +YN + Y + ++ + V+ EM +G +A +Y + L + ++
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL---LKRHCRV 303
Query: 358 SQALEVY----EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
S + Y ++M+ G D YS+LI +A + A +FE+M ++G+V +VVT
Sbjct: 304 SHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 414 YNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF 473
Y ++I A +LL +M E PD Y M
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI 422
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+++++PD +++ L+ GL +SG++ A FE++ + P K ++ L
Sbjct: 423 EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 183/388 (47%), Gaps = 12/388 (3%)
Query: 172 LMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEF 231
LMI +L ++++ D+ + + +EM + + ++T V+ L K GK A MK +
Sbjct: 194 LMIALLKENRSADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 232 GVDMDTAALNMLMDALVK--GNS-VEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNF 287
G + + N L+D K GN + A VL E ++ + N +FNIL++G+ + N
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ KV ++M + P+V SYNS I C+ + + ++M G PN +TY +
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ K L +AL+++ +K G VP T Y+ LI K G++ D + E+M ++GI
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
V DV TYN +I+ C + E A +L ++ + PDL T+H
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL-ISRGLTPRHGALKQLVKDL 526
+ M K L P T+++++ G K G L A + ++ R L + L++
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 527 EAKSMLKE-----KEHIEKLMTPPSIRF 549
K L++ E +EK + P I +
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 140/290 (48%), Gaps = 7/290 (2%)
Query: 166 SPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
SP L +N++ID K N ++ +EM + + + ++ L GK +AI+
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGW 281
+M GV + N L++ K + ++ A + ++ + +P + +N+L++ +
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP-TTRMYNMLIDAY 411
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
C++ D + E+M+ G VPDV +YN I C + + ++ ++++ G P+
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 470
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
VT+ I+M + G+ +A + ++M G+ P Y+ ++ K G LK A ++
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 402 MPKQGIVR-DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
M K+ +R +V +YN ++ + E A LL EM E+ P+ TY
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 312 FIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
+ +Y ++ F + + G +A++ +M AL K + + VY++M
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC---AHSREE 428
I P+ ++ +I L K G++ A DV EDM G +VV+YNT+I C + +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 429 TALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A +LKEM E P+L T++ + M D+ P++ +++ L+
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 489 HGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+GL GK+ A S ++++S G+ P L+ MLKE
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 121/277 (43%), Gaps = 5/277 (1%)
Query: 243 LMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH 300
+D V+ S H + + + +NS ++L+ + F+ + + +
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182
Query: 301 GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
G+ S + + + V+ V +EM PN T+ +V+ AL K G++++A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 361 LEVYEKMKSHGIVPDTPFYSSLI---FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
+V E MK +G P+ Y++LI LG G++ A V ++M + + ++ T+N +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
I ++++ KEM ++ KP++ +Y+ + M +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
P+L T++ L++G K+ L A F + +G P
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 22/229 (9%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKV 208
A F K Q G + +YN++ID K D + L EEM + EG V + T +
Sbjct: 385 ALDMFGSVKGQ-GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER-EGIVPDVGTYNCL 442
Query: 209 LRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-I 267
+ L + G E A F ++ G+ D ++LM+ + A +L E + +
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFRKVD 326
++NI+M G+C+ N A + M KE +V SYN ++ Y +
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
+L EM E G PN +TY IV E+M G VPD
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVK----------------EEMVDQGFVPD 594
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 171/371 (46%), Gaps = 33/371 (8%)
Query: 177 LGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMD 236
+ KSKN+DLV L M LY+ V+ L + + A++ +M +FG + D
Sbjct: 79 IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138
Query: 237 TAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVME 295
++ L++ +GN V A ++ + + + + +N +++G C++ + A ++ +
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 296 DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
M+ G D +YNS + C + +++ +M PN +T+T V+ K G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
+ S+A+++YE+M + PD Y+SLI L GR+ +A + + M +G + DVVTYN
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 416 TMISTACAHSREETALRLLKEMEERS--------------------------------CK 443
T+I+ C R + +L +EM +R +
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
P++ TY E+M K+++ D+ T+++++HG+ K G ++ A
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 504 FEELISRGLTP 514
F L +GL P
Sbjct: 439 FRSLSCKGLKP 449
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 162/337 (48%), Gaps = 11/337 (3%)
Query: 180 SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
S N + +L +M + ++ +KVL ++ K+ ++ I+ F M+ G+ D +
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 240 LNMLMDALVKGNSVEHAHGV---LLEFK---SLIPLNSGSFNILMNGWCRVRNFDQARKV 293
N++++ L + + A V +++F ++ ++S L+NG+C+ A +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSS-----LINGFCQGNRVFDAIDL 161
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
+ M+E GF PDV YN+ I+ C ++ + M +G +AVTY ++ L
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 354 AGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
+G+ S A + M IVP+ ++++I + K G+ +A ++E+M ++ + DV T
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 414 YNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF 473
YN++I+ C H R + A ++L M + C PD+ TY+ M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
+ L D T++ ++ G ++G+ D A F + SR
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 140/304 (46%), Gaps = 6/304 (1%)
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLN 270
K G DA+ F RM+ GV D N L+ L A ++ + + ++P N
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-N 243
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
+F +++ + + F +A K+ E+M PDVF+YNS I C + Q+L+
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
M GC P+ VTY ++ K+ ++ + +++ +M G+V DT Y+++I +AG
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
R A ++F M + +R TY+ ++ C + R E AL L + M++ + D+ TY+
Sbjct: 364 RPDAAQEIFSRMDSRPNIR---TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
+ L PD+ +++ ++ G + + D + + ++
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 511 GLTP 514
GL P
Sbjct: 481 GLLP 484
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 35/270 (12%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
F+ +++ + +N+D + M+ G D++SYN I C F V+ +M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
+ G P+ VT + ++ + ++ A+++ KM+ G PD Y+++I K G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
DA ++F+ M + G+ D VTYN++++ C R A RL+++M R
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR------------- 238
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
D+ P++ TF+ ++ K GK A +EE+ R +
Sbjct: 239 ----------------------DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 514 PRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
P L+ L + E + + LM
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 185/386 (47%), Gaps = 4/386 (1%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
+ G++ Y +++ L KS N L +L +M + ++ + V+ L K G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNI 276
+DA++ F M+ G+ D + L+ L + +L E +++IP + +F+
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP-DVVTFSA 320
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L++ + + +A+++ +M G PD +YNS I+ +C + + +Q+ + M G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
C P+ VTY+I++ + KA ++ + ++ ++ S G++P+T Y++L+ ++G+L A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
++F++M +G+ VVTY ++ C + AL + ++M++ + Y+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
+ + PD+ T+++++ GL K G L A F ++ G TP
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 517 GALKQLVKD-LEAKSMLKEKEHIEKL 541
L++ L ++ E IE++
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEM 586
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 167/356 (46%), Gaps = 3/356 (0%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
L++ M ++ T VL RL K+G A+ FR+M+E + ++++D+L
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 249 KGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
K S + A + +E K I + +++ L+ G C +D K++ +M +PDV
Sbjct: 257 KDGSFDDALSLFNEMEMKG-IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++++ I+ + + + ++ EM G P+ +TY ++ K L +A ++++
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M S G PD YS LI KA R+ D +F ++ +G++ + +TYNT++ C +
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
A L +EM R P + TY E M K+ ++ +G +++
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
++HG+ + K+D A S F L +G+ P ++ L K L E + + + M
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 168/359 (46%), Gaps = 2/359 (0%)
Query: 151 FGFFTWAKT-QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
F F + + GYE ++ +++ LV+ M + + L T++ ++
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IP 268
L G+ +A+ RM E+G D +++ L K + A + + + I
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
+ ++I+++ C+ +FD A + +M+ G DV +Y+S I C+D + ++
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
L EM P+ VT++ ++ K G+L +A E+Y +M + GI PDT Y+SLI K
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
L +A +F+ M +G D+VTY+ +I++ C R + +RL +E+ + P+ T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
Y+ + M + P + T+ +L+ GL +G+L+ A FE++
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 169/389 (43%), Gaps = 9/389 (2%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
+P +N + + ++K +DLV + M + +YTMT ++ + K A +
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV---LLEFKSLIPLNSGSFNILMNGWC 282
R + G + DT + L++ V A + ++E K L + S L+NG C
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS--TLINGLC 186
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+A +++ M E+GF PD +Y + C + + +M E + V
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
Y+IV+ +L K G AL ++ +M+ GI D YSSLI L G+ D + +M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
+ I+ DVVT++ +I + A L EM R PD TY+
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
+ M PD+ T+S+L++ K+ ++D F E+ S+GL P L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 523 VKDL-EAKSMLKEKEHIEKLMT---PPSI 547
V ++ + KE +++++ PPS+
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 9/285 (3%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
FN L + R + +D + M+ +G D+++ I YC K VL
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
+ G P+ +T++ ++ G++S+A+ + ++M PD S+LI L GR+
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
+A + + M + G D VTY +++ C AL L ++MEER+ K + Y
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M + D+ T+S L+ GL GK D E+I R +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 514 PRHGALKQLV-------KDLEAKSMLKEKEHIEKLMTPPSIRFTS 551
P L+ K LEAK + E I + + P +I + S
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELY--NEMITRGIAPDTITYNS 355
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
++ +ID+ K EL EM T ++ K +A F M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
G + D ++L+++ K V+ + E K LIP N+ ++N L+ G+C+
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQSGKL 436
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ A+++ ++M G P V +Y ++ C + + K ++ E+M ++ Y I+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + A ++ A ++ + G+ PD Y+ +I L K G L +A +F M + G
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEME 438
D TYN +I S +++ L++EM+
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 3/227 (1%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G E Y+++I+ K+K D L E++ T ++ ++GK A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNG 280
F+ M GV +L+D L + A + + KS + L G +NI+++G
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C D A + + + G PDV +YN I C + D + +M E+GC P+
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 341 AVTYTIVMFA-LGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
TY I++ A LG +G +S ++E+ E+MK G D+ +I +L
Sbjct: 560 DFTYNILIRAHLGGSGLIS-SVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 3/267 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +ID K ++ + M + T + ++ KA + +D + FR +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
G+ +T N L+ + + A + E S +P + ++ IL++G C +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A ++ E M++ + YN I C+ + +S+ G P+ VTY +++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI-LGKAGRLKDACDVFEDMPKQGI 407
L K G LS+A ++ KMK G PD Y+ LI LG +G L + ++ E+M G
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEMKVCGF 591
Query: 408 VRDVVTYNTMISTACAHSREETALRLL 434
D T +I +++ L +L
Sbjct: 592 SADSSTIKMVIDMLSDRRLDKSFLDML 618
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 10/282 (3%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L NG ++ + A + E M + +P +N + K + V + M NG
Sbjct: 42 LRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
+ T TI++ + +L A V + G PDT +S+L+ GR+ +A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
+ + M + D+VT +T+I+ C R AL L+ M E +PD TY P
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
M + ++ + +S+++ L K G D A S F E+ +G+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 517 GALKQLVKDL-------EAKSMLKEKEHIEKLMTPPSIRFTS 551
L+ L + ML +E I + + P + F++
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKML--REMIGRNIIPDVVTFSA 320
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 174/360 (48%), Gaps = 9/360 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N +ID LG +D + E+M + TL T + +++ LT+A + DA + M
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-----IPLNSGSFNILMNGWCRV 284
+ G + N L+D+ ++ S+ A +E K L + L S ++N L+ G+C+
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKA----IEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
D A +++++M GF + S+ S I C F + + EM P
Sbjct: 414 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK 404
T ++ L K G+ S+ALE++ + + G V DT ++L+ L +AG+L +A + +++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 405 QGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXX 464
+G V D V+YNT+IS C + + A L EM +R KPD TY
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 465 XXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ +N + PD+ T+S+++ G K+ + + FF+E++S+ + P L++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 168/398 (42%), Gaps = 14/398 (3%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G + YN +I K+ D L++EM V + T V+ L + A
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL---IPLNSGSFNILM 278
+ M + L L+ L K +H+ + L F+ L +++ + N L+
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHG--KHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+G C D+A ++ +++ G V D SYN+ I C K + L+EM + G
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+ TY+I++ L ++ +A++ ++ K +G++PD YS +I KA R ++ +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
F++M + + + V YN +I C R AL L ++M+ + P+ TY
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH-- 516
E M L P++ ++ L+ G K G++ E+ S+ + P
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 517 -----GALKQLVKDLEAKSMLKEKEHIEKLMTPPSIRF 549
G + EA +L E EK + P SI +
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMR--EKGIVPDSITY 788
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 146/333 (43%), Gaps = 4/333 (1%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--L 261
T +L L +A + + AF + + GV D ++A KG VE A + +
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
E + P N +FN +++G +D+A E M E G P + +Y+ ++ K
Sbjct: 287 EEAGVAP-NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
VL+EM++ G PPN + Y ++ + +AG L++A+E+ + M S G+ + Y++
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
LI K G+ +A + ++M G + ++ ++I C+H ++ALR + EM R+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
P D T + L+HGL ++GKLD A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 502 SFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+E++ RG + L+ K L E
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 3/251 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I K D + ++EM K YT + ++ L K E+AI + K
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
G+ D ++++D K E E K++ P N+ +N L+ +CR
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRL 661
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
A ++ EDMK G P+ +Y S I+ + + EEM G PN YT +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ GK GQ+ + + +M S + P+ Y+ +I + G + +A + +M ++GI
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 408 VRDVVTYNTMI 418
V D +TY I
Sbjct: 782 VPDSITYKEFI 792
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 167 PELYNLMIDILGKSKNFDLVWELVE--EMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIA 223
P+ Y I I G N + V E ++ + K G + +YT + ++ KA + E+
Sbjct: 573 PDNYTYSILICGLF-NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGW 281
F M V +T N L+ A + + A + ++ K + P NS ++ L+ G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP-NSATYTSLIKGM 690
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
+ ++A+ + E+M+ G P+VF Y + I+ Y KV+ +L EM PN
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
+TYT+++ + G +++A + +M+ GIVPD+ Y I+ K G + +A
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 6/217 (2%)
Query: 312 FIESYC----HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
IE YC D + +D V ++ G P+ T I++ +L +A + + E ++ +
Sbjct: 194 LIEVYCTQFKRDGCYLALD-VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 252
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
G+ PD +++ I K G++++A +F M + G+ +VVT+NT+I R
Sbjct: 253 -CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
+ A ++M ER +P L TY + M K P++ ++ L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ ++G L+ A + ++S+GL+ L+K
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y++MID K++ + E +EM ++R ++G+ A+ MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCRVRNF 287
G+ ++A L+ + + VE A + E + L P N + L++G+ ++
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQM 731
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ ++ +M P+ +Y I Y D + + ++L EM E G P+++TY
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 348 MFALGKAGQLSQALE 362
++ K G + +A +
Sbjct: 792 IYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 174/360 (48%), Gaps = 9/360 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N +ID LG +D + E+M + TL T + +++ LT+A + DA + M
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-----IPLNSGSFNILMNGWCRV 284
+ G + N L+D+ ++ S+ A +E K L + L S ++N L+ G+C+
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKA----IEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
D A +++++M GF + S+ S I C F + + EM P
Sbjct: 414 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK 404
T ++ L K G+ S+ALE++ + + G V DT ++L+ L +AG+L +A + +++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 405 QGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXX 464
+G V D V+YNT+IS C + + A L EM +R KPD TY
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 465 XXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ +N + PD+ T+S+++ G K+ + + FF+E++S+ + P L++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 168/398 (42%), Gaps = 14/398 (3%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G + YN +I K+ D L++EM V + T V+ L + A
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL---IPLNSGSFNILM 278
+ M + L L+ L K +H+ + L F+ L +++ + N L+
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHG--KHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+G C D+A ++ +++ G V D SYN+ I C K + L+EM + G
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+ TY+I++ L ++ +A++ ++ K +G++PD YS +I KA R ++ +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
F++M + + + V YN +I C R AL L ++M+ + P+ TY
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH-- 516
E M L P++ ++ L+ G K G++ E+ S+ + P
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 517 -----GALKQLVKDLEAKSMLKEKEHIEKLMTPPSIRF 549
G + EA +L E EK + P SI +
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMR--EKGIVPDSITY 788
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 146/333 (43%), Gaps = 4/333 (1%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--L 261
T +L L +A + + AF + + GV D ++A KG VE A + +
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
E + P N +FN +++G +D+A E M E G P + +Y+ ++ K
Sbjct: 287 EEAGVAP-NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
VL+EM++ G PPN + Y ++ + +AG L++A+E+ + M S G+ + Y++
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
LI K G+ +A + ++M G + ++ ++I C+H ++ALR + EM R+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
P D T + L+HGL ++GKLD A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 502 SFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+E++ RG + L+ K L E
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 3/251 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I K D + ++EM K YT + ++ L K E+AI + K
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
G+ D ++++D K E E K++ P N+ +N L+ +CR
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRL 661
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
A ++ EDMK G P+ +Y S I+ + + EEM G PN YT +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ GK GQ+ + + +M S + P+ Y+ +I + G + +A + +M ++GI
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 408 VRDVVTYNTMI 418
V D +TY I
Sbjct: 782 VPDSITYKEFI 792
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 167 PELYNLMIDILGKSKNFDLVWELVE--EMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIA 223
P+ Y I I G N + V E ++ + K G + +YT + ++ KA + E+
Sbjct: 573 PDNYTYSILICGLF-NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGW 281
F M V +T N L+ A + + A + ++ K + P NS ++ L+ G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP-NSATYTSLIKGM 690
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
+ ++A+ + E+M+ G P+VF Y + I+ Y KV+ +L EM PN
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
+TYT+++ + G +++A + +M+ GIVPD+ Y I+ K G + +A
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 6/217 (2%)
Query: 312 FIESYC----HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
IE YC D + +D V ++ G P+ T I++ +L +A + + E ++ +
Sbjct: 194 LIEVYCTQFKRDGCYLALD-VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 252
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
G+ PD +++ I K G++++A +F M + G+ +VVT+NT+I R
Sbjct: 253 -CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
+ A ++M ER +P L TY + M K P++ ++ L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ ++G L+ A + ++S+GL+ L+K
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y++MID K++ + E +EM ++R ++G+ A+ MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCRVRNF 287
G+ ++A L+ + + VE A + E + L P N + L++G+ ++
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQM 731
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ ++ +M P+ +Y I Y D + + ++L EM E G P+++TY
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 348 MFALGKAGQLSQALE 362
++ K G + +A +
Sbjct: 792 IYGYLKQGGVLEAFK 806
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 182/389 (46%), Gaps = 23/389 (5%)
Query: 148 VPAF----GFFTWAKT--QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVT 201
VP+F G W ++ ++ L N + DI+ D +L +M K + +
Sbjct: 27 VPSFFNLCGSGCWERSFASASGDYREILRNRLSDII----KVDDAVDLFGDMVKSRPFPS 82
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
+ K+L + K K E I+ +M+ G+ D ++ ++ + + + A VL
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 262 EFKSL------IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES 315
+ L + L+S L+NG+C + A +++ M E G+ PD F++ + I
Sbjct: 143 KMMKLGYEPDIVTLSS-----LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 316 -YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP 374
+ H+K V ++++M + GC P+ VTY V+ L K G + AL + KM++ I
Sbjct: 198 LFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 375 DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
+ ++++I L K ++ A D+F +M +GI +VVTYN++I+ C + R A RLL
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 435 KEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKS 494
M E+ P++ T++ E M + + PD T++LL++G
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 495 GKLDHACSFFEELISRGLTPRHGALKQLV 523
+LD A F+ ++S+ P L+
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 164/349 (46%), Gaps = 5/349 (1%)
Query: 162 GYEHSPELYNL--MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
GYE P++ L +++ SK LV++M + +T T ++ L K
Sbjct: 148 GYE--PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
+A+A +M + G D +++ L K ++ A +L + ++ I N FN ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ C+ R+ + A + +M+ G P+V +YNS I C+ + ++L M E
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN VT+ ++ A K G+L +A +++E+M I PDT Y+ LI RL +A +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
F+ M + + ++ TYNT+I+ C R E + L +EM +R + TY
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ M N + D+ T+S+L+HGL GKLD A F+ L
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 157/339 (46%), Gaps = 2/339 (0%)
Query: 207 KVLR-RLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
++LR RL+ K +DA+ F M + N L+ A+ K N E + + ++
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 266 L-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
L I + +++I +N +CR A V+ M + G+ PD+ + +S + YCH K
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
++++M E G P+ T+T ++ L + S+A+ + ++M G PD Y +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
L K G + A ++ M I +VV +NT+I + C + E A+ L EME + +P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
++ TY+ +M + ++P++ TF+ L+ K GKL A
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 505 EELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
EE+I R + P L+ + L E + + K M
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 6/347 (1%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
++N +ID L K ++ ++ +L EM + T ++ L G+ DA M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRN 286
E ++ + N L+DA K + A + E +S+ P ++ ++N+L+NG+C
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP-DTITYNLLINGFCMHNR 378
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
D+A+++ + M +P++ +YN+ I +C K ++ EMS+ G N VTYT
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ +AG A V+++M S+ + D YS L+ L G+L A +F+ + K
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
+ ++ YNTMI C + A L + S KPD+ TY+
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M ++ P+ GT++ L+ + + +E+ S G
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 138/333 (41%), Gaps = 36/333 (10%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
A FT +T+ G + YN +I+ L + L+ M + + + T ++
Sbjct: 277 AVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLI 267
K GK +A M + +D DT N+L++ N ++ A + + K +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
P N ++N L+NG+C+ + + ++ +M + G V + +Y + I+ + D
Sbjct: 396 P-NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK------------------- 368
V ++M N P + +TY+I++ L G+L AL +++ ++
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 369 -------------SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
S I PD Y+++I L L++A D+F M + G + + TYN
Sbjct: 515 KAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLET 448
T+I + L+KEM D T
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 10/289 (3%)
Query: 271 SGSFN-ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
SG + IL N + D A + DM + P + +N + + F V +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E+M G + TY+I + + QLS AL V KM G PD SSL+ +
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
R+ DA + + M + G D T+ T+I H++ A+ L+ +M +R C+PDL TY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
M + ++ F+ ++ L K ++ A F E+ +
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 510 RGLTPRHGALKQLVKDL-------EAKSMLKEKEHIEKLMTPPSIRFTS 551
+G+ P L+ L +A +L +EK + P + F +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLL--SNMLEKKINPNVVTFNA 333
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 168 ELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR 227
+ YN +I+ K K + EL EM++ T T +++ +AG + A F++
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVR 285
M V D ++L+ L ++ A V+ ++ KS + LN +N ++ G C+
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTAL-VIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+A + + PDV +YN+ I C + ++ D + +M E+G PN+ TY
Sbjct: 518 KVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
++ A + + + E+ ++M+S G V D S
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSN--SSVQQILK-RFNND 146
L+ F E K E + + + P+ + L +GF + N +Q+ K + D
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 147 WVPAF--------GFFTWAKTQTGYEHSPEL-----------YNLMIDILGKSKNFDLVW 187
+P GF + + G E E+ Y +I ++ + D
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 188 ELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL 247
+ ++M + + T + +L L GK + A+ F+ +++ ++++ N +++ +
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 248 VKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
K V A + I + ++N +++G C R +A + MKE G +P+
Sbjct: 514 CKAGKVGEAWDLFCSLS--IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+YN+ I + D D ++++EM +G +A T ++V
Sbjct: 572 TYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 166/339 (48%), Gaps = 13/339 (3%)
Query: 193 MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS 252
M K +++ K+L + K K + I+ +M+ G+ + N+L++ + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 253 VEHAHGVLLEFK------SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
+ A +L + S++ L+S L+NG+C + A +++ M E G+ PD
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSS-----LLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
Query: 307 FSYNSFIES-YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
++ + I + H+K V +++ M + GC PN VTY +V+ L K G + A +
Sbjct: 116 ITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
KM++ I D ++++I L K + DA ++F++M +GI +VVTY+++IS C++
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 426 REETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFS 485
R A +LL +M E+ P+L T++ + M K + PD+ T++
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 486 LLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
L++G +LD A FE ++S+ P L+K
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 9/360 (2%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G H+ YN++I+ + L L+ +M K ++ T++ +L +
Sbjct: 38 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 97
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNIL 277
DA+A +M E G DT L+ L N A ++ + + P N ++ ++
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTYGVV 156
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL---EEMSE 334
+NG C+ + D A ++ M+ DV +N+ I+S C +R VD L +EM
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK---YRHVDDALNLFKEMET 213
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
G PN VTY+ ++ L G+ S A ++ M I P+ +++LI K G+ +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
A + +DM K+ I D+ TYN++I+ C H R + A ++ + M + C PDL+TY+
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M L D T++ L+ GL G D+A F++++S G+ P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 180/399 (45%), Gaps = 53/399 (13%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVP 149
L+ F NK A+ + + P LV + V + KR + D
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV----------VVNGLCKRGDIDL-- 168
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF + E ++N +ID L K ++ D L +EM + T + ++
Sbjct: 169 AFNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVK-GNSVE--HAHGVLLEFKSL 266
L G+ DA M E ++ + N L+DA VK G VE H +++ +S+
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSI 286
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC--------- 317
P + ++N L+NG+C D+A+++ E M PD+ +YN+ I+ +C
Sbjct: 287 DP-DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 318 --------------------------HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
HD D +V ++M +G PP+ +TY+I++ L
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
G+L +ALEV++ M+ I D Y+++I + KAG++ D D+F + +G+ +V
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
VTYNTMIS C+ + A LLK+M+E PD TY+
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 169/356 (47%), Gaps = 3/356 (0%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
LV+ M + L T V+ L K G + A +M+ ++ D N ++D+L
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 249 KGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
K V+ A + +E K + P N +++ L++ C + A +++ DM E P++
Sbjct: 197 KYRHVDDALNLFKEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++N+ I+++ + F + +++ ++M + P+ TY ++ +L +A +++E
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M S PD Y++LI K+ R++D ++F +M +G+V D VTY T+I
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ A ++ K+M PD+ TY ++M K+++ D+ ++
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
++ G+ K+GK+D F L +G+ P ++ L +K +L+E + K M
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I+ D ++ E M + + L T +++ K+ + ED FR M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS-LIPLNSGSFNILMNGWCRVRNFD 288
G+ DT L+ L ++A V + S +P + +++IL++G C +
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A +V + M++ D++ Y + IE C + +S G PN VTY ++
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
L L +A + +KMK G +PD+ Y++LI
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 5/213 (2%)
Query: 167 PEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIA 223
P+L YN +I KSK + EL EM+ H G V T T +++ L G ++A
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWC 282
F++M GV D ++L+D L +E A V KS I L+ + ++ G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ D + + G P+V +YN+ I C + ++ +L++M E+G P++
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
TY ++ A + G + + E+ +M+S V D
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 4/397 (1%)
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
FT +++ G+ S + N +I L + +L W + +E+++ + +YT+ ++ L
Sbjct: 188 FTLLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALC 246
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNS 271
K GK E +++E GV D N L+ A +E A ++ + K P
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP-GV 305
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++N ++NG C+ +++A++V +M G PD +Y S + C D + ++V +
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M P+ V ++ +M ++G L +AL + +K G++PD Y+ LI + G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+ A ++ +M +QG DVVTYNT++ C A +L EM ER+ PD T
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
+ M + + D+ T++ L+ G K G +D A + +++S+
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 512 LTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
+ P + LV L +K L E + M +I+
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 159/357 (44%), Gaps = 13/357 (3%)
Query: 167 PEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYV---TLYTMTKVLRRLTKAGKHEDA 221
P+L ++ M+ + +S N D + K G + +YT+ +++ + G A
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTI--LIQGYCRKGMISVA 429
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMN 279
+ M + G MD N ++ L K + A + E ++L P +S + IL++
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP-DSYTLTILID 488
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G C++ N A ++ + MKE DV +YN+ ++ + D ++ +M P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
++Y+I++ AL G L++A V+++M S I P +S+I ++G D
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER--SCKPDLETYHPXXXXXX 457
E M +G V D ++YNT+I A L+K+MEE PD+ TY+
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + ++PD T++ +++G L A +E++ RG +P
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 171/443 (38%), Gaps = 75/443 (16%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I + +EL+ M +YT V+ L K GK+E A F M
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 230 EFGVDMD-TAALNMLMDALVKGNSVE-------------------------------HAH 257
G+ D T ++LM+A KG+ VE +
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 258 GVLLEFKS-----LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSF 312
L+ F S LIP N + IL+ G+CR A + +M + G DV +YN+
Sbjct: 393 KALMYFNSVKEAGLIPDNV-IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 313 IESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGI 372
+ C K + D++ EM+E P++ T TI++ K G L A+E+++KMK I
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 373 VPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALR 432
D Y++L+ GK G + A +++ DM + I+ ++Y+ +++ C+ A R
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 433 LLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF------------------- 473
+ EM ++ KP + + E M
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 474 ------------------KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR 515
+ L PD+ T++ ++HG + ++ A ++I RG+ P
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 516 HGALKQLVKDLEAKSMLKEKEHI 538
++ ++ L E I
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRI 714
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 5/290 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Q G YN ++ L K K +L EM + + YT+T ++ K G +
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNIL 277
+A+ F++MKE + +D N L+D K ++ A + + K ++P S++IL
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP-TPISYSIL 556
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+N C + +A +V ++M P V NS I+ YC + + LE+M G
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH--GIVPDTPFYSSLIFILGKAGRLKDA 395
P+ ++Y +++ + +S+A + +KM+ G+VPD Y+S++ + ++K+A
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
V M ++G+ D TY MI+ + A R+ EM +R PD
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN ++D GK + D E+ +M E T + + ++ L G +A + M
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMNGWCRVRNF 287
+ N ++ + + L + S +P + S+N L+ G+ R N
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP-DCISYNTLIYGFVREENM 636
Query: 288 DQARKVMEDMKEH--GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+A +++ M+E G VPDVF+YNS + +C ++ + VL +M E G P+ TYT
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
++ L++A ++++M G PD F
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%)
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
C N + +++ +A +L +A E + ++S G ++LI L + G ++ A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
V++++ + G+ +V T N M++ C + E L +++E+ PD+ TY+
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
M SP + T++ +++GL K GK + A F E++ GL+P
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 517 GALKQLVKDLEAKSMLKEKEHI 538
+ L+ + K + E E +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKV 362
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 35/259 (13%)
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
++ I +Y + R+ + + G + ++ +L + G + A VY+++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST-------- 420
G+ + + ++ L K G+++ + ++G+ D+VTYNT+IS
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 421 ---------------------------ACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
C H + E A + EM PD TY
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M D+ PDL FS ++ +SG LD A +F + GL
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 514 PRHGALKQLVKDLEAKSML 532
P + L++ K M+
Sbjct: 408 PDNVIYTILIQGYCRKGMI 426
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 1/358 (0%)
Query: 190 VEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVK 249
V + A G + ++ +L ++ HE A + +R+M E ++ +L+ L++ V+
Sbjct: 60 VFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQ 119
Query: 250 GNSVEHAHGVL-LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFS 308
A GVL L K N + NIL+ G CR +A ++ +M+ + +PDVFS
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
YN+ I +C K+ K ++ EM +GC + VT+ I++ A KAG++ +A+ ++MK
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
G+ D Y+SLI G L +F+++ ++G +TYNT+I C + +
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 429 TALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A + + M ER +P++ TY M + D P+ T+++++
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 489 HGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPS 546
+ L K G + A E + R P + L+ L AK L E + LM S
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 154/362 (42%), Gaps = 35/362 (9%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AFG + G+ + +N+++ L ++ L+ EM ++ +++ V+
Sbjct: 126 AFGVLALM-LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IP 268
R + + E A+ MK G +L+DA K ++ A G L E K + +
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
+ + L+ G+C D+ + + +++ E G P +YN+ I +C ++ ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
E M E G PN TYT ++ L G+ +AL++ M P+ Y+ +I L K
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
G + DA ++ E M K+ D +TYN ++ CA + A +LL M + S D
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--- 421
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
PD+ +++ L+HGL K +L A ++ L+
Sbjct: 422 ------------------------------PDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 509 SR 510
+
Sbjct: 452 EK 453
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 137/348 (39%), Gaps = 48/348 (13%)
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHED 220
+G S + ++ID KAGK ++
Sbjct: 206 SGCSWSLVTWGILIDA-----------------------------------FCKAGKMDE 230
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG------SF 274
A+ + MK G++ D L+ ++ + E L G ++
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-----LERGDSPCAITY 285
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
N L+ G+C++ +A ++ E M E G P+V++Y I+ C ++ Q+L M E
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
PNAVTY I++ L K G ++ A+E+ E MK PD Y+ L+ L G L +
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 395 ACDVFEDMPKQGIVR--DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPX 452
A + M K DV++YN +I C +R AL + + E+ D T +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 453 XXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
+ + + + + T++ ++ G K+G L+ A
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 144/351 (41%), Gaps = 44/351 (12%)
Query: 170 YNLMIDIL---GKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFR 226
Y +ID L GK+K +L+ M + + T ++ +L K G DA+
Sbjct: 320 YTGLIDGLCGVGKTKE---ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL---LEFKSLIPLNSGSFNILMNGWCR 283
MK+ D N+L+ L ++ A +L L+ S + S+N L++G C+
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
QA + + + E D + N + S D K ++ +++S++ N+ T
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
YT ++ K G L+ A + KM+ + P Y+ L+ L K G L A +FE+M
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
+ DVV++N MI + ++A LL M PDL TY
Sbjct: 557 RDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY-------------- 602
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
S L++ K G LD A SFF++++ G P
Sbjct: 603 ---------------------SKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 3/281 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVT--LYTMTKVLRRLTKAGKHEDAIAAFRR 227
YN+++ L + D +L+ M K Y + + ++ L K + A+ +
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNILMNGWCRVRN 286
+ E D N+L+++ +K V A + + S I NS ++ +++G+C+
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
+ A+ ++ M+ P VF YN + S C + + ++ EEM + P+ V++ I
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ KAG + A + M G+ PD YS LI K G L +A F+ M G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
D ++++ + + L+K++ ++ D E
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I L K ++ + + + G T +L KAG A+ ++++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNILMNGWCRVRNFD 288
+ + ++ ++D K + A G+L + + S + + +N L++ C+ + D
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
QA ++ E+M+ PDV S+N I+ D + + +L MS G P+ TY+ ++
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
K G L +A+ ++KM G PD S++ G ++ + + + IV
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Query: 409 RDVVTYNTMISTACAHSRE-ETALRLLKEMEER 440
D T++ C S + A RLL+ +++
Sbjct: 667 LDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 35/274 (12%)
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
N LM R RN + A M E + S + +E Y + VL M +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
G N + I++ L + + +A+ + +M+ + ++PD Y+++I + L+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
A ++ +M G +VT+ +I C + + A+ LKEM+ + DL Y
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS--- 252
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
L+ G G+LD + F+E++ RG +P
Sbjct: 253 --------------------------------LIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 515 RHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
L++ LKE I + M +R
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 3/356 (0%)
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFG 232
+ID LGK D +++ E+M + T +++ G+ ED ++ M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 233 VDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMNGWCRVRNFDQA 290
D LN MD + K E + E K+ +P ++ S++IL++G + ++
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP-DARSYSILIHGLIKAGFANET 571
Query: 291 RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFA 350
++ MKE G V D +YN I+ +C K Q+LEEM G P VTY V+
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 351 LGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD 410
L K +L +A ++E+ KS I + YSSLI GK GR+ +A + E++ ++G+ +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 411 VVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXE 470
+ T+N+++ AL + M+E C P+ TY +
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 471 HMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
M K + P +++ ++ GL K+G + A + F+ + G P +++ L
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y MI +L K+ D E+ E + K+ Y ++ AGK ++A + R +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
G A N ++ L K V+ A V E K N ++NIL++ CR D
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A ++ + M++ G P+V + N ++ C + + + EEM C P+ +T+ ++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
LGK G++ A +VYEKM ++ Y+SLI GR +D +++DM Q
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
D+ NT + E + +E++ R PD +Y
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + D +++++ G K GK++ A EE+ ++G P
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 200/465 (43%), Gaps = 47/465 (10%)
Query: 94 TFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGF 153
TF N+ V I +L+ P L F+ V +L+R D A +
Sbjct: 28 TFEGNRQT-VNDICNVLETGPWGPS-AENTLSALSFKPQPEFVIGVLRRLK-DVNRAIEY 84
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
F W + +T H PE YN ++ ++ + +NFD + +++ EM+ ++ T +++
Sbjct: 85 FRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCV 144
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGS 273
KA K + + M++F +A L+ A ++V H+ +L F
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF---SAVNHSDMMLTLF---------- 191
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
+ M+E G+ P V + + I + + +L+EM
Sbjct: 192 ---------------------QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
+ + V Y + + + GK G++ A + + +++++G+ PD Y+S+I +L KA RL
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
+A ++FE + K V YNTMI + + + A LL+ + P + Y+
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
E M K D +P+L T+++L+ L ++GKLD A + + GL
Sbjct: 351 TCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 514 PRHGALKQLVKDL-------EAKSMLKEKEHIEKLMTPPSIRFTS 551
P + +V L EA +M +E ++ K+ TP I F S
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDY--KVCTPDEITFCS 452
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 173/383 (45%), Gaps = 8/383 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN ++ L K D ++ EEM K + L T ++ L +AGK + A M+
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNF 287
+ G+ + +N+++D L K ++ A + +++K P + +F L++G +V
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP-DEITFCSLIDGLGKVGRV 463
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D A KV E M + + Y S I+++ + ++ ++M C P+
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
M + KAG+ + ++E++K+ VPD YS LI L KAG + ++F M +QG
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
V D YN +I C + A +LL+EM+ + +P + TY
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR----HGALKQLV 523
E + ++ +S L+ G K G++D A EEL+ +GLTP + L LV
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 524 KDLEAKSMLKEKEHIEKLMTPPS 546
K E L + +++L P+
Sbjct: 704 KAEEINEALVCFQSMKELKCTPN 726
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+++I L K+ + +EL M + + V+ K GK A MK
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS-LIPLNSGSFNILMNGWCRVRNFD 288
G + ++D L K + ++ A+ + E KS I LN ++ L++G+ +V D
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A ++E++ + G P+++++NS +++ ++ + + M E C PN VTY I++
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L K + ++A +++M+ G+ P T Y+++I L KAG + +A +F+ G V
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEER-------SCKPDLETYH 450
D YN MI +R A L +E R +C L+T H
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLH 843
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 43/262 (16%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
A+ KT+ G+E + Y +ID L K D + L EE + + + ++
Sbjct: 606 AYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL 269
K G+ ++A + + G+ + N L+DALVK + A L+ F+S+ L
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA---LVCFQSMKEL 721
Query: 270 ----NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKV 325
N ++ IL+NG C+VR F++A ++M++ G P SY + I
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS----------- 770
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
L KAG +++A ++++ K++G VPD+ Y+++I
Sbjct: 771 ------------------------GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 386 LGKAGRLKDACDVFEDMPKQGI 407
L R DA +FE+ ++G+
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGL 828
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 163/342 (47%), Gaps = 13/342 (3%)
Query: 180 SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
S D L M K +++ K+L + K K + I+ +M+ G+ +
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 240 LNMLMDALVKGNSVEHAHGVLLEFK------SLIPLNSGSFNILMNGWCRVRNFDQARKV 293
N+L++ + + + A +L + S++ L+S L+NG+C + A +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS-----LLNGYCHGKRISDAVAL 177
Query: 294 MEDMKEHGFVPDVFSYNSFIES-YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALG 352
++ M E G+ PD ++ + I + H+K V +++ M + GC PN VTY +V+ L
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 353 KAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV 412
K G + A + KM++ I + YS++I L K DA ++F +M +G+ +V+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
TY+++IS C + R A RLL +M ER P++ T++ + M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
K + PD+ T+S L++G +LD A FE +IS+ P
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 1/356 (0%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ GYE S + +++ K LV++M + T T ++ L K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
+A+A RM + G + ++++ L K ++ A +L + ++ I N ++ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ C+ R+ D A + +M+ G P+V +Y+S I C+ + + ++L +M E
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN VT+ ++ A K G+L +A ++Y++M I PD YSSLI RL +A +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
FE M + +VVTYNT+I+ C R + + L +EM +R + TY
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M + + P++ T++ L+ GL K+GKL+ A FE L + P
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 167/363 (46%), Gaps = 5/363 (1%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM--AKHEGYVTLYTMTKVLRRLTKAG 216
Q G + + Y ++++ L K + DL + L+ +M AK E V +Y+ V+ L K
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS--TVIDSLCKYR 274
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFN 275
+DA+ F M+ GV + + L+ L A +L + + I N +FN
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
L++ + + +A K+ ++M + PD+F+Y+S I +C + + E M
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
C PN VTY ++ KA ++ + +E++ +M G+V +T Y++LI +A +A
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXX 455
VF+ M G+ +++TYNT++ C + + E A+ + + ++ +P + TY+
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 456 XXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR 515
+ + PD+ ++ ++ G + G + A + F ++ G P
Sbjct: 515 MCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Query: 516 HGA 518
G
Sbjct: 575 SGT 577
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 11/289 (3%)
Query: 271 SGSFN-ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
SG + IL NG ++ D A + M + +P +F +N + + K F V +
Sbjct: 50 SGDYREILRNGLHSMK-LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG 108
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E+M G N TY I++ + Q+S AL + KM G P SSL+
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
R+ DA + + M + G D +T+ T+I H++ A+ L+ M +R C+P+L TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
M + ++ +S ++ L K D A + F E+ +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 510 RGLTPRHGALKQLVKDL-------EAKSMLKEKEHIEKLMTPPSIRFTS 551
+G+ P L+ L +A +L + IE+ + P + F +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLL--SDMIERKINPNVVTFNA 335
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 184/413 (44%), Gaps = 39/413 (9%)
Query: 115 SSPELVAQALDGHGFQVSNSSVQQILKRFNNDWV--PAFGFFTWAKTQTGYEHSPELYNL 172
SS +L G F + ++IL+ +D A G F E +N
Sbjct: 32 SSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE-FNK 90
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFG 232
++ + K K FD+V L E+M + E LYT ++ + + A+A +M + G
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 233 VDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARK 292
+ S++ L+S L+NG+C + A
Sbjct: 151 YE-----------------------------PSIVTLSS-----LLNGYCHGKRISDAVA 176
Query: 293 VMEDMKEHGFVPDVFSYNSFIES-YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
+++ M E G+ PD ++ + I + H+K V +++ M + GC PN VTY +V+ L
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
K G AL + KM++ I D ++++I L K + DA ++F++M +GI +V
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
VTY+++IS C++ R A +LL +M E+ P+L T++ +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
M K + PD+ T++ LV+G +LD A FE ++S+ P L+K
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 152/323 (47%), Gaps = 36/323 (11%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
E ++N +ID L K ++ D L +EM + T + ++ L G+ DA
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWC 282
M E ++ + N L+DA VK G VE K I + ++N L+NG+C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC------------------------- 317
D+A+++ E M PDV +YN+ I+ +C
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 318 ----------HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
HD D +V ++M +G PP+ +TY+I++ L G+L +ALEV++ M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
+ I D Y+++I + KAG++ D D+F + +G+ +VVTYNTMIS C+
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 428 ETALRLLKEMEERSCKPDLETYH 450
+ A LLK+M+E P+ TY+
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYN 579
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 156/347 (44%), Gaps = 1/347 (0%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ GYE S + +++ K LV++M + T T ++ L K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
+A+A RM + G + ++++ L K + A +L + ++ I + FN ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ C+ R+ D A + ++M+ G P+V +Y+S I C + Q+L +M E
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN VT+ ++ A K G+ +A ++Y+ M I PD Y+SL+ RL A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
FE M + DVVTYNT+I C R E L +EM R D TY
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
+ M + + PD+ T+S+L+ GL +GKL+ A F+
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 170/356 (47%), Gaps = 3/356 (0%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
LV+ M + L T V+ L K G + A+ +M+ ++ D N ++D+L
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 249 KGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
K V+ A + +E K + P N +++ L++ C + A +++ DM E P++
Sbjct: 272 KYRHVDDALNLFKEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++N+ I+++ + F + +++ ++M + P+ TY ++ +L +A +++E
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M S PD Y++LI K+ R++D ++F +M +G+V D VTY T+I
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ A ++ K+M PD+ TY ++M K+++ D+ ++
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
++ G+ K+GK+D F L +G+ P ++ L +K +L+E + K M
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 11/289 (3%)
Query: 271 SGSFN-ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
SG + IL NG ++ D A + M + +P + +N + + K F V +
Sbjct: 50 SGDYREILRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG 108
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E+M TY I++ + Q+S AL + KM G P SSL+
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
R+ DA + + M + G D +T+ T+I H++ A+ L+ M +R C+P+L TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
M + D+ F+ ++ L K +D A + F+E+ +
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 510 RGLTPRHGALKQLVKDL-------EAKSMLKEKEHIEKLMTPPSIRFTS 551
+G+ P L+ L +A +L + IEK + P + F +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLL--SDMIEKKINPNLVTFNA 335
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +++ D ++ E M + + + T +++ K+ + ED FR M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS-LIPLNSGSFNILMNGWCRVRNFD 288
G+ DT L+ L ++A V + S +P + +++IL++G C +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A +V + M++ D++ Y + IE C + +S G PN VTY ++
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
L L +A + +KMK G +P++ Y++LI
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 5/276 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N +ID K F +L ++M K ++T ++ + + A F M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
D N L+ K VE + E + L+ ++ ++ L+ G +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDC 451
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D A+KV + M G PD+ +Y+ ++ C++ K +V + M ++ + YT +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + KAG++ +++ + G+ P+ Y+++I L L++A + + M + G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
+ + TYNT+I + + L++EM RSC+
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM--RSCR 605
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVT-LYTMTKVLRRLTKAGKHEDAIAAFRRM 228
YN +I KSK + EL EM+ H G V T T +++ L G ++A F++M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNF 287
GV D ++L+D L +E A V KS I L+ + ++ G C+
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D + + G P+V +YN+ I C + ++ +L++M E+G PN+ TY +
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDT 376
+ A + G + + E+ +M+S V D
Sbjct: 582 IRAHLRDGDKAASAELIREMRSCRFVGDA 610
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 4/408 (0%)
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFD--LVWELVEEMAKHEGYVT 201
NND A + Q GY+ Y+L+I L +S D ++ L +E+ + + +
Sbjct: 210 NNDIEKALNLIAKMR-QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELD 268
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
+ + ++ K+G A+ + G+ TA L ++ AL A +
Sbjct: 269 VQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE 328
Query: 262 EFK-SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
E + S I + ++N L+ G+ + A ++ +M++ G PD +Y+ I++Y +
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ VL+EM PN+ ++ ++ G+ + +V ++MKS G+ PD FY+
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
+I GK L A F+ M +GI D VT+NT+I C H R A + + ME R
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
C P TY+ M + P++ T + LV KSG+ + A
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 501 CSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
EE+ S GL P L+ + + ++ + ++MT ++
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 158/375 (42%), Gaps = 11/375 (2%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Q+G + YN ++ K+ +V EM K +T + ++ AG+ E
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
A + M+ V ++ + L+ + VL E KS+ + + +N+++
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ + + D A + M G PD ++N+ I+ +C +++ E M GC
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P A TY I++ + G + + KMKS GI+P+ +++L+ + GK+GR DA +
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
E+M G+ YN +I+ E A+ + M KP L +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGA 518
++M +N + PD+ T++ L+ L + K +EE+I G P
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP---- 687
Query: 519 LKQLVKDLEAKSMLK 533
D +A+SML+
Sbjct: 688 ------DRKARSMLR 696
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 1/324 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+L+ID + ++ +++EM + + +++L G+ + + MK
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
GV D N+++D K N ++HA S I + ++N L++ C+
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A ++ E M+ G +P +YN I SY + + + ++L +M G PN VT+T ++
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
GK+G+ + A+E E+MKS G+ P + Y++LI + G + A + F M G+
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
++ N++I+ R+ A +L+ M+E KPD+ TY
Sbjct: 617 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVV 676
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLR 492
E M + PD S+L LR
Sbjct: 677 YEEMIMSGCKPDRKARSMLRSALR 700
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 94/245 (38%), Gaps = 37/245 (15%)
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL--------------- 351
+YN+ I + + D K ++ +M ++G + V Y++V+ +L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 352 ----------------------GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
K+G S+AL++ ++ G+ T S+I L +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
GR +A +FE++ + GI YN ++ + A ++ EME+R PD TY
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ M D+ P+ FS L+ G R G+ +E+ S
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 510 RGLTP 514
G+ P
Sbjct: 438 IGVKP 442
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 7/206 (3%)
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
N C + Y+I++ ALG++ +L +A + +K + P T Y++LI + ++
Sbjct: 161 NLCFSYELLYSILIHALGRSEKLYEAFLLSQK---QTLTPLT--YNALIGACARNNDIEK 215
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETA--LRLLKEMEERSCKPDLETYHPX 452
A ++ M + G D V Y+ +I + ++ ++ LRL KE+E + D++ +
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDI 275
Query: 453 XXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
LS T ++ L SG+ A + FEEL G+
Sbjct: 276 IMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGI 335
Query: 513 TPRHGALKQLVKDLEAKSMLKEKEHI 538
PR A L+K LK+ E +
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESM 361
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 194/441 (43%), Gaps = 39/441 (8%)
Query: 138 QILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHE 197
+++K+ +N+ F F+ +++ + HS YNL+ L K+ DL ++ E M
Sbjct: 74 EVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG 133
Query: 198 GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
+ ++ + GK A A ++ F V+ +N L++ LVK + VE A
Sbjct: 134 VSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 258 GVL---LEFKS-------------------------LIPLNSG--------SFNILMNGW 281
+ L F+S L+ + SG ++N L+ G+
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251
Query: 282 CRVRNFDQARKVMEDMKEHGFV-PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C+ ++A ++ +D+K PDV +Y S I YC R+ +L++M G P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VT+ +++ KAG++ A E+ KM S G PD ++SLI + G++ ++E
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
+M +G+ + TY+ +I+ C +R A LL ++ + P Y+P
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
E M K PD TF++L+ G G++ A S F ++++ G +P +
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 521 QLVKDLEAKSMLKEKEHIEKL 541
L+ L M KE H+ ++
Sbjct: 492 SLLSCLLKAGMAKEAYHLNQI 512
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 194/441 (43%), Gaps = 39/441 (8%)
Query: 138 QILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHE 197
+++K+ +N+ F F+ +++ + HS YNL+ L K+ DL ++ E M
Sbjct: 74 EVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG 133
Query: 198 GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
+ ++ + GK A A ++ F V+ +N L++ LVK + VE A
Sbjct: 134 VSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 258 GVL---LEFKS-------------------------LIPLNSG--------SFNILMNGW 281
+ L F+S L+ + SG ++N L+ G+
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251
Query: 282 CRVRNFDQARKVMEDMKEHGFV-PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C+ ++A ++ +D+K PDV +Y S I YC R+ +L++M G P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VT+ +++ KAG++ A E+ KM S G PD ++SLI + G++ ++E
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
+M +G+ + TY+ +I+ C +R A LL ++ + P Y+P
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
E M K PD TF++L+ G G++ A S F ++++ G +P +
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 521 QLVKDLEAKSMLKEKEHIEKL 541
L+ L M KE H+ ++
Sbjct: 492 SLLSCLLKAGMAKEAYHLNQI 512
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 180/440 (40%), Gaps = 71/440 (16%)
Query: 139 ILKRFNND-WVP-AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH 196
++KR + VP A FF ++H+P + +MI L D V L+++M
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 197 EGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA 256
+ + V+ + G E A+ F R+KEFG D N ++D L+ N ++
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 257 HGVLLEFK--SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFS------ 308
+ V + K P N ++N+L+ C+ D A+K++ +M G PD S
Sbjct: 166 YMVYRDMKRDGFEP-NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 309 ------------------------YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
YN+ I C + D++ +++ EM E G PN ++Y
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK 404
+ ++ L +GQ+ A +M G P+ SSL+ G DA D++ M +
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 405 Q-GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
G+ +VV YNT++ C+H A+ + MEE C P++ TY
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS------------ 392
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
L++G K G LD A + ++++ G P +V
Sbjct: 393 -----------------------LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 524 KDLEAKSMLKEKEHIEKLMT 543
+ L S KE E + ++M+
Sbjct: 430 EALCRHSKFKEAESLIEIMS 449
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 5/342 (1%)
Query: 185 LVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM 244
LV E E + E V++Y ++ L K ++ A R M E G+ + + + L+
Sbjct: 231 LVKEGRELAERFEPVVSVYN--ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 245 DALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNG-WCRVRNFDQARKVMEDMKEHGF 302
+ L +E A L + K N + + L+ G + R FD + ++ G
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Query: 303 VPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALE 362
P+V +YN+ ++ +C + K V M E GC PN TY ++ K G L A+
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 363 VYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
++ KM + G P+ Y++++ L + + K+A + E M K+ V T+N I C
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468
Query: 423 AHSREETALRLLKEMEER-SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDL 481
R + A ++ ++ME++ C P++ TY+ +F +
Sbjct: 469 DAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSS 528
Query: 482 GTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
T++ L+HG +G A +++ G +P + ++
Sbjct: 529 STYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 146/360 (40%), Gaps = 40/360 (11%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM- 228
Y+ +I++L S +L + + +M K + +YT++ +++ G DA+ + +M
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNF 287
+ FG+ + A N L+ ++ A V + + N ++ L+NG+ + +
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC---------- 337
D A + M G P+V Y + +E+ C F++ + ++E MS+ C
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463
Query: 338 --------------------------PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
PPN VTY ++ L KA ++ +A + ++ G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
+ + Y++L+ AG A + M G D +T N +I C + E A
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 432 RLLKEME--ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVH 489
++L + R +PD+ +Y E M + P + T+S+L++
Sbjct: 584 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 7/248 (2%)
Query: 154 FTWAKTQT-GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
+ W K T G + +Y M++ L + F L+E M+K ++ T ++ L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 213 TKAGKHEDAIAAFRRM-KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLN 270
AG+ + A FR+M ++ + N L+D L K N +E A+G+ E F + +
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
S ++N L++G C A +++ M G PD + N I +YC + Q+L+
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Query: 331 EMS--ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI--FIL 386
+S P+ ++YT V++ L ++ + + E+M S GIVP +S LI FIL
Sbjct: 588 LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL 647
Query: 387 GKAGRLKD 394
R D
Sbjct: 648 DDIVRAHD 655
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 172/367 (46%), Gaps = 23/367 (6%)
Query: 89 KLVTPTFNENKHDYV-EAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDW 147
+ V F +N++ + +S L K +P +VA+ L + ND
Sbjct: 96 RFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVL-----------------KLGNDA 138
Query: 148 VPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTK 207
A FF WA Q GY+H YN L ++ +F +L E M +G +
Sbjct: 139 AVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELM-DSQGRPPSEKQFE 197
Query: 208 VLRRLTKAGKHEDAIA-AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-- 264
+L R+ + + + +MK+FG N +MDALVK + A V +FK
Sbjct: 198 ILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKED 257
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
L+ S +F IL+ G C+ ++ ++++ M+E+ PDVF+Y + I++ + +
Sbjct: 258 GLVE-ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
+V +EM + P+ + Y ++ L K G++ + E++ +MK I+ D Y LI
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
G+++ AC+++ED+ G + D+ YN +I C+ ++ + A +L + E +P
Sbjct: 377 GFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Query: 445 DLETYHP 451
D ET P
Sbjct: 437 DFETLSP 443
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 179/437 (40%), Gaps = 13/437 (2%)
Query: 99 KHDYV--EAISTLLKE--HHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFF 154
KHD+ A + L H + + + + +D G S + +++ ++ ++
Sbjct: 155 KHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYY 214
Query: 155 TWAKTQT-GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL-RRL 212
+ K + G++ LYN ++D L K+ FDL + E+ K +G V T +L + L
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDF-KEDGLVEESTTFMILVKGL 273
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNS 271
KAG+ E+ + +RM+E D A ++ LV +++ + V E + I +
Sbjct: 274 CKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDV 333
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++ L+ G C+ ++ ++ +MK + D Y IE + D R + E+
Sbjct: 334 MAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWED 393
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
+ ++G + Y V+ L Q+ +A ++++ + PD S ++ R
Sbjct: 394 LVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNR 453
Query: 392 LKDACDVFEDMPKQGI-VRDVVTYNTMISTACA-HSREETALRLLKEMEERSCKPDLETY 449
L D +V E + + G V D +T CA + AL + ++ + + Y
Sbjct: 454 LSDFSNVLERIGELGYPVSDYLT--QFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVY 510
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ M K PD ++S+ + + G + ACSF E++I
Sbjct: 511 NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE 570
Query: 510 RGLTPRHGALKQLVKDL 526
P A L K L
Sbjct: 571 MSCVPSIAAYLSLTKGL 587
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 138/385 (35%), Gaps = 52/385 (13%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y MI L N D + +EM + E + ++ L K G+ E F MK
Sbjct: 301 YTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMK 360
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
+ +D +L++ V V A + + S + G +N ++ G C V D
Sbjct: 361 GKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD 420
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP---------- 338
+A K+ + E PD + + + +Y VLE + E G P
Sbjct: 421 KAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFK 480
Query: 339 -------PNAV-----------------TYTIVMFALGKAGQLSQALEVYEKMKSHGIVP 374
NA+ Y I+M AL K G + ++L ++ +M+ G P
Sbjct: 481 LLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEP 540
Query: 375 DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
D+ YS I + G +K AC E + + V + Y ++ C + + L+
Sbjct: 541 DSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLV 600
Query: 435 KE---------MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFS 485
+E ME K L H E +F N++ +
Sbjct: 601 RECLGNVESGPME---FKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEV-----IYC 652
Query: 486 LLVHGLRKSGKLDHACSFFEELISR 510
++ G+ K G + A F EL R
Sbjct: 653 AIISGMSKHGTIKVAREVFTELKKR 677
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 195 KHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE 254
K G V++Y + ++ L K G + +++ F M++ G + D+++ ++ + V+ V+
Sbjct: 502 KGHGSVSVYNI--LMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVK 559
Query: 255 HA---HGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM---KEHGFVPDVFS 308
A H ++E S +P + ++ L G C++ D ++ + E G P F
Sbjct: 560 AACSFHEKIIEM-SCVP-SIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFK 615
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
Y + C + KV +V++EM++ G N V Y ++ + K G + A EV+ ++K
Sbjct: 616 YALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELK 675
Query: 369 SHGIVPDT 376
++ +
Sbjct: 676 KRKVMTEA 683
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 162/389 (41%), Gaps = 40/389 (10%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
F FF WA + S E + L+ID+L + DL W+ +EE+ V Y ++
Sbjct: 76 GFRFFIWASRRE-RLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLI 134
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALN---------------------------- 241
K G E A+ +F RMKEF D N
Sbjct: 135 SAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNC 194
Query: 242 --------MLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQAR 291
+LMD L K A + + + + P N ++ IL++G C+ + D AR
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP-NRVTYTILISGLCQRGSADDAR 253
Query: 292 KVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
K+ +M+ G PD ++N+ ++ +C + ++L ++G Y+ ++ L
Sbjct: 254 KLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
+A + +QA E+Y M I PD Y+ LI L KAG+++DA + MP +GI D
Sbjct: 314 FRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDT 373
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
YN +I C E L EM E PD T+
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
+ K+ SP + TF+ L+ GL KSG+L A
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEA 462
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 158/379 (41%), Gaps = 45/379 (11%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ +ID L +++ + +EL M K + T +++ L+KAGK EDA+ M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL-NSGSFNILMNGWCRVRNFD 288
G+ DT N ++ AL +E + LE ++ + IL+ CR
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM---------------- 332
+A ++ ++++ G P V ++N+ I+ C + ++ +L +M
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 333 -----------------------SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS 369
++ G P+ V+Y +++ +AG + AL++ ++
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREET 429
G+ PD+ Y++LI L + GR ++A +F K Y ++++ +C +
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLV 603
Query: 430 ALRL-LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A L +K +++ SC D ET + E + D LG +++ +
Sbjct: 604 AFNLWMKYLKKISCLDD-ETANEIEQCFKEGETERALRRLIELDTRKD-ELTLGPYTIWL 661
Query: 489 HGLRKSGKLDHACSFFEEL 507
GL +SG+ A F L
Sbjct: 662 IGLCQSGRFHEALMVFSVL 680
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 179/381 (46%), Gaps = 11/381 (2%)
Query: 149 PAFGFFTWAKT---QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTM 205
P+F FF W + +T Y++ +L + L D L EM K + ++
Sbjct: 30 PSFSFF-WRRAFSGKTSYDYREKLSRNGLSEL----KLDDAVALFGEMVKSRPFPSIIEF 84
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
+K+L + K K + I+ +M+ G+ + ++L++ + + + A VL +
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144
Query: 266 L-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES-YCHDKDFR 323
L N + + L+NG+C + +A +++ M G+ P+ ++N+ I + H+K
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ +++ M GC P+ VTY +V+ L K G A + KM+ + P Y+++I
Sbjct: 205 AM-ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
L K + DA ++F++M +GI +VVTY+++IS C + R A RLL +M ER
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
PD+ T+ + M K + P + T+S L++G +LD A
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 504 FEELISRGLTPRHGALKQLVK 524
FE ++S+ P L+K
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIK 404
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 182/436 (41%), Gaps = 49/436 (11%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVP 149
L+ F NK A+ + P+LV + V + KR + D
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV----------VVNGLCKRGDTDL-- 239
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF + Q E +YN +ID L K K+ D L +EM + T + ++
Sbjct: 240 AFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIP 268
L G+ DA M E ++ D + L+DA VK + A + E K I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
+ +++ L+NG+C D+A+++ E M PDV +YN+ I+ +C K + +V
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
EMS+ G N VTY I++ L +AG A E++++M S G+ P+ Y++L+ L K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
G+L+ A VFE + + + + TYN MI C + E L + + KPD+
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
Y+ ++ G + G + A + F+E+
Sbjct: 539 YNT-----------------------------------MISGFCRKGSKEEADALFKEMK 563
Query: 509 SRGLTPRHGALKQLVK 524
G P G L++
Sbjct: 564 EDGTLPNSGCYNTLIR 579
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 13/362 (3%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY-----TMTKVLRRLTK 214
+ GYE + + +++ SK LV++M +VT Y T ++ L
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM-----FVTGYQPNTVTFNTLIHGLFL 198
Query: 215 AGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSG 272
K +A+A RM G D ++++ L K + A +L +E L P
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP-GVL 257
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
+N +++G C+ ++ D A + ++M+ G P+V +Y+S I C+ + ++L +M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
E P+ T++ ++ A K G+L +A ++Y++M I P YSSLI RL
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPX 452
+A +FE M + DVVTYNT+I C + R E + + +EM +R + TY+
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 453 XXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
+ M + + P++ T++ L+ GL K+GKL+ A FE L +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 513 TP 514
P
Sbjct: 498 EP 499
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 1/328 (0%)
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFN 275
K +DA+A F M + + L+ A+ K N + + + ++L IP N +++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
IL+N +CR A V+ M + G+ P++ + +S + YCH K + ++++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
G PN VT+ ++ L + S+A+ + ++M + G PD Y ++ L K G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXX 455
++ M + + V+ YNT+I C + + AL L KEME + +P++ TY
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 456 XXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR 515
M + ++PD+ TFS L+ K GKL A ++E++ R + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 516 HGALKQLVKDLEAKSMLKEKEHIEKLMT 543
L+ L E + + + M
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMV 388
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 182/407 (44%), Gaps = 21/407 (5%)
Query: 128 GFQVSNSSVQQILKRFNN--DWVPAFGFFTWAKTQTGYEHSPEL-YNLMIDILGKSKNFD 184
G S S + KRF P F + Y++ +L N+++D+ D
Sbjct: 8 GIVASQSKKMSLAKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDL-----KLD 62
Query: 185 LVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM 244
+L EM + ++ K+L + K K + I+ RM+ + D + N+L+
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 245 DALVKGNSVEHAHGVLLEFKSL------IPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
+ + + + A VL + L + L+S L+NG+C + +A +++ M
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS-----LLNGYCHGKRISEAVALVDQMF 177
Query: 299 EHGFVPDVFSYNSFIES-YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
+ P+ ++N+ I + H+K V +++ M GC P+ TY V+ L K G +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
AL + +KM+ I D Y+++I L + DA ++F +M +GI +VVTYN++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
I C + R A RLL +M ER P++ T+ + M K +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
PD+ T+S L++G +LD A FE +IS+ P L+K
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 150/327 (45%), Gaps = 1/327 (0%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
LV++M E T ++ L K +A+A RM G D +++ L
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 249 KGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
K ++ A +L + K I + + +++ C +N + A + +M G P+V
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
+YNS I C+ + ++L +M E PN VT++ ++ A K G+L +A ++Y++M
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
I PD YSSLI RL +A +FE M + +VVTYNT+I C R
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
E + L +EM +R + TY+ + M + + PD+ T+S+L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTP 514
+ GL K GKL+ A FE L + P
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEP 498
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 160/328 (48%), Gaps = 3/328 (0%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
L++ M L+T V+ L K G + A++ ++M++ ++ D ++DAL
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 249 KGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
+V A + E K + P N ++N L+ C + A +++ DM E P+V
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRP-NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++++ I+++ + + +++ +EM + P+ TY+ ++ +L +A ++E
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M S P+ Y++LI KA R+++ ++F +M ++G+V + VTYNT+I
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ A ++ K+M PD+ TY E++ K+ + PD+ T+++
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTP 514
++ G+ K+GK++ F L +G+ P
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 164/380 (43%), Gaps = 39/380 (10%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
E +Y +ID L KN + L EM + T ++R L G+ DA
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA--------------------------- 256
M E ++ + + L+DA VK + A
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 257 -HGVLLEFKSLIPL--------NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
H L E K + L N ++N L+ G+C+ + ++ ++ +M + G V +
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
+YN+ I+ D ++ ++M +G PP+ +TY+I++ L K G+L +AL V+E +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
+ + PD Y+ +I + KAG+++D D+F + +G+ +V+ Y TMIS C +
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
E A L +EM+E P+ TY+ + M D T S++
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 488 VHGLRKSGKLDHACSFFEEL 507
++ L G+L+ S+ E L
Sbjct: 612 INMLH-DGRLEK--SYLEML 628
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 162/337 (48%), Gaps = 9/337 (2%)
Query: 183 FDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNM 242
D +L EM K + ++ +K+L + K K + I+ +M+ GV + N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 243 LMDALVKGNSVEHAHGVLLEFKSLIPLNSG----SFNILMNGWCRVRNFDQARKVMEDMK 298
+++ L + + + A +L ++ L G + N L+NG+C +A +++ M
Sbjct: 106 MINCLCRRSQLSFALAIL---GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 299 EHGFVPDVFSYNSFIES-YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
E G+ PD ++ + + + H+K V ++E M GC P+ VTY V+ L K G+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
AL + KM+ I D YS++I L K + DA ++F +M +GI DV TY+++
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
IS C + R A RLL +M ER P++ T++ + M + +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
P++ T++ L++G +LD A F ++S+ P
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 190/418 (45%), Gaps = 20/418 (4%)
Query: 140 LKRFNNDWVPAFGFFTWAKTQT-GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEG 198
+K+F D V +FG K + G H+ YN+MI+ L + ++ +M K
Sbjct: 78 MKKF--DLVISFG----EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY 131
Query: 199 YVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHG 258
++ T+ +L + +A+A +M E G DT L+ L + N A
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 259 VL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
++ + K P + ++ ++NG C+ D A ++ M++ DV Y++ I+S
Sbjct: 192 LVERMVVKGCQP-DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 317 CHDKDFRKVDQVLE---EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
C +R VD L EM G P+ TY+ ++ L G+ S A + M I
Sbjct: 251 CK---YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
P+ ++SLI K G+L +A +F++M ++ I ++VTYN++I+ C H R + A ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
M + C PD+ TY+ M + L + T++ L+HG +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 494 SGKLDHACSFFEELISRGLTPR----HGALKQLVKDLEAKSMLKEKEHIEKLMTPPSI 547
+ D+A F++++S G+ P + L L K+ + + + E+++K P I
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 169/351 (48%), Gaps = 4/351 (1%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
LVE M L T V+ L K G+ + A+ +M++ ++ D + ++D+L
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 249 KGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
K V+ A + E K + P + +++ L++ C + A +++ DM E P+V
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++NS I+++ + + +++ +EM + PN VTY ++ +L +A +++
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M S +PD Y++LI KA ++ D ++F DM ++G+V + VTY T+I S
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ A + K+M P++ TY+ E++ K+ + PD+ T+++
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEH 537
+ G+ K+GK++ F L +G+ P A ++ K LKE+ +
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF-CKKGLKEEAY 540
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 162/378 (42%), Gaps = 42/378 (11%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+Y+ +ID L K ++ D L EM ++T + ++ L G+ DA M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRN 286
E ++ + N L+DA K + A + E +S+ P N ++N L+NG+C
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP-NIVTYNSLINGFCMHDR 360
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK-------------------------- 320
D+A+++ M +PDV +YN+ I +C K
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 321 ---------DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
D V ++M +G PN +TY ++ L K G+L +A+ V+E ++
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
+ PD Y+ + + KAG+++D D+F + +G+ DV+ YNTMIS C +E A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
L +M+E PD TY+ + M + D T+ L+ L
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Query: 492 RKSGKLDHACSFFEELIS 509
G+LD F E++S
Sbjct: 601 H-DGRLDKG---FLEVLS 614
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 162/363 (44%), Gaps = 7/363 (1%)
Query: 167 PEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAA 224
P+L Y +I+ L K DL L+ +M K + + + V+ L K +DA+
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 225 FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL---LEFKSLIPLNSGSFNILMNGW 281
F M G+ D + L+ L A +L LE K I N +FN L++ +
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK--INPNVVTFNSLIDAF 320
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
+ +A K+ ++M + P++ +YNS I +C + Q+ M C P+
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
VTY ++ KA ++ +E++ M G+V +T Y++LI +A +A VF+
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX 461
M G+ +++TYNT++ C + + E A+ + + +++ +PD+ TY+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 462 XXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQ 521
+ + PD+ ++ ++ G K G + A + F ++ G P G
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 522 LVK 524
L++
Sbjct: 561 LIR 563
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 9/272 (3%)
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
D+A + +M + P + ++ + + K F V E+M G N TY I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ L + QLS AL + KM G P +SL+ R+ +A + + M + G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
D VT+ T++ H++ A+ L++ M + C+PDL TY
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
M K + D+ +S ++ L K +D A + F E+ ++G+ P L+ L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 527 -------EAKSMLKEKEHIEKLMTPPSIRFTS 551
+A +L + +E+ + P + F S
Sbjct: 286 CNYGRWSDASRLL--SDMLERKINPNVVTFNS 315
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 196/435 (45%), Gaps = 31/435 (7%)
Query: 88 PKLVTPTFNENKHDYVEAISTLLKEHHSSPE-LVAQALDGHGFQVSNSSVQQILKRFNND 146
P +TP D++ + T+L + +SP+ + L FQ+++ Q+ F
Sbjct: 35 PTTITPI----NQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLS 90
Query: 147 WVPAFGFFTWAKTQ-TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTM 205
W P FF +++T + H+ N M+ I+G S+N DL WEL +E+ K G V T
Sbjct: 91 WRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKR-GLVNDKTF 149
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
VL+ L A + + + F M FG + +N ++ L K VE A V ++ K
Sbjct: 150 RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE 209
Query: 266 LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKV 325
I + ++ ++ G+C V + +A K+ M + GF D+ + +E+ F +
Sbjct: 210 FIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEA 269
Query: 326 DQVLEEM-SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
+V M S+ G + Y +++ L K G++ A +V+++M+ G+ D ++SLI+
Sbjct: 270 SKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIY 329
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
L R+ +A + E + D+ Y+ +I R A + ++M +R C+P
Sbjct: 330 GLLVKRRVVEAYGLVEGVENP----DISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEP 385
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL-SPD-LGTF-SLLVHGLRKSGKLDHAC 501
+ TY H+ + PD L F ++ V G+ K+GK
Sbjct: 386 IMHTY---------------LMLLQGHLGRRGRKGPDPLVNFDTIFVGGMIKAGKRLETT 430
Query: 502 SFFEELISRGL-TPR 515
+ E + RGL PR
Sbjct: 431 KYIERTLKRGLEVPR 445
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 158/342 (46%), Gaps = 5/342 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y ++I+ D +L++EM ++T ++R + K G + A R ++
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFD 288
G + D + N+L+ AL+ E ++ + F N +++IL+ CR +
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A +++ MKE G PD +SY+ I ++C + + LE M +GC P+ V Y V+
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L K G+ QALE++ K+ G P++ Y+++ L +G A + +M GI
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCK--PDLETYHPXXXXXXXXXXXXXXX 466
D +TYN+MIS C + A LL +M RSC+ P + TY+
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
E M N P+ T+++L+ G+ +G A +L+
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 144/310 (46%)
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK 264
M K+ R ++G + +++ M G + D L+ ++ A V+ +
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE 151
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
+ ++N L+NG+C++ D A +V++ M+ F PD +YN I S C
Sbjct: 152 KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
+VL ++ + C P +TYTI++ A G + +AL++ ++M S G+ PD Y+++I
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
+ K G + A ++ ++ +G DV++YN ++ + E +L+ +M C P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
++ TY + M + L+PD ++ L+ + G+LD A F
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 505 EELISRGLTP 514
E +IS G P
Sbjct: 392 ETMISDGCLP 401
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 159/341 (46%), Gaps = 6/341 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I+ K D +++ M + T ++ L GK + A+ ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
+L++A + V+ A ++ E + L P + ++N ++ G C+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP-DMFTYNTIIRGMCKEGMV 279
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D+A +++ +++ G PDV SYN + + + + + ++++ +M C PN VTY+I+
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ L + G++ +A+ + + MK G+ PD Y LI + GRL A + E M G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
+ D+V YNT+++T C + + + AL + ++ E C P+ +Y+
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
M N + PD T++ ++ L + G +D A FE L+
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLV 497
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 40/309 (12%)
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSF--NILMNGWCRVRNFDQARKV 293
DT L + + GN +E H LLE N L+ G+ +RN +A +V
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLH--LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
ME +++ G PDVF+YN+ I +C +VL+ M P+ VTY I++ +L
Sbjct: 147 MEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 354 AGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
G+L AL+V ++ S P Y+ LI G + +A + ++M +G+ D+ T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 414 YNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF 473
YNT+I C + A +++ +E + C+PD+ +Y
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY------------------------ 301
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLK 533
++L+ L GK + ++ S P L+ L ++
Sbjct: 302 -----------NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 534 EKEHIEKLM 542
E ++ KLM
Sbjct: 351 EAMNLLKLM 359
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 168/369 (45%), Gaps = 4/369 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+TG + + Y ++ID L F+ EL+ +M + + T ++ K G E
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNIL 277
DA+ M+ + +T N L+ K N V A GVL + + ++P + ++N L
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLP-DVVTYNSL 468
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
++G CR NFD A +++ M + G VPD ++Y S I+S C K + + + + + G
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
PN V YT ++ KAG++ +A + EKM S +P++ +++LI L G+LK+A
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
+ E M K G+ V T +I + A ++M KPD TY
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHG 517
M +N +SPDL T+S L+ G G+ + A + + G P
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 518 ALKQLVKDL 526
L+K L
Sbjct: 709 TFLSLIKHL 717
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 171/383 (44%), Gaps = 4/383 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN M++ K N + + V ++ + +T T ++ + + A F M
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCRVRNF 287
G + A L+ L ++ A + ++ K P ++ +L+ C
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP-TVRTYTVLIKSLCGSERK 339
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+A ++++M+E G P++ +Y I+S C F K ++L +M E G PN +TY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ K G + A++V E M+S + P+T Y+ LI K+ + A V M ++ +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKV 458
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
+ DVVTYN++I C ++A RLL M +R PD TY
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLE 527
+ + + ++P++ ++ L+ G K+GK+D A E+++S+ P L+ L
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 528 AKSMLKEKEHIEKLMTPPSIRFT 550
A LKE +E+ M ++ T
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPT 601
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 180/406 (44%), Gaps = 26/406 (6%)
Query: 114 HSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVP--AFGFFTWAKTQTGYEHSPELYN 171
H SP L + VS S + F+ D P A F W Y+HS Y
Sbjct: 76 HKSPSLKSM--------VSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYA 127
Query: 172 LMIDILGKSKNFDLVWELVEEMAKHEGYV--TLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
++ +L + +V+++ M K V LY + + R++ K + E
Sbjct: 128 SLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVL-DLCRKMNKDERFE---------- 176
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFD 288
+ N L+++L + V+ V +E + + N ++N ++NG+C++ N +
Sbjct: 177 -LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVE 235
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A + + + E G PD F+Y S I YC KD +V EM GC N V YT ++
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L A ++ +A++++ KMK P Y+ LI L + R +A ++ ++M + GI
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
++ TY +I + C+ + E A LL +M E+ P++ TY+
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
E M LSP+ T++ L+ G KS + A +++ R + P
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLP 460
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 179/438 (40%), Gaps = 57/438 (13%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +ID +S NFD + L+ M +T T ++ L K+ + E+A F ++
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
+ GV+ + L+D K V+ AH +L + K+ +P NS +FN L++G C
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP-NSLTFNALIHGLCADGKL 583
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+A + E M + G P V + I D DF ++M +G P+A TYT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + G+L A ++ KM+ +G+ PD YSSLI G G+ A DV + M G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 408 VRDVVTYNTMIS---------------TACAHSRE---ETALRLLKEMEERSCKPDLETY 449
T+ ++I CA S +T + LL++M E S P+ ++Y
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKND------------LS------------------- 478
+HM +N+ LS
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Query: 479 -----PDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLK 533
P L + +L+ GL K G+ + S F+ L+ G A K ++ + + +++
Sbjct: 824 CVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Query: 534 EKEHIEKLMTPPSIRFTS 551
+ +M +F+S
Sbjct: 884 AFYELFNVMEKNGCKFSS 901
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 20/298 (6%)
Query: 172 LMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEF 231
++I L K +FD + ++M +T T ++ + G+ DA +M+E
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 232 GV--DM-----------DTAALNMLMDAL--VKGNSVE-HAHGVLLEFKSLIPLNSGSFN 275
GV D+ D N D L ++ E H L K L+ + G
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 276 ILMNGWCRVRN---FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
C + N FD +++E M EH P+ SY I C + R ++V + M
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 333 SEN-GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
N G P+ + + ++ K + ++A +V + M G +P LI L K G
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
+ VF+++ + G D + + +I E L ME+ CK +TY
Sbjct: 847 KERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 20/237 (8%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV-------KGNSVE 254
L+T + +++ G+ A +RM++ G + L+ L+ KG+ E
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 255 -HAHGVLLEFKSLIPL-----------NSGSFNILMNGWCRVRNFDQARKVMEDMKEH-G 301
A ++EF +++ L N+ S+ L+ G C V N A KV + M+ + G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
P +N+ + C K + +V+++M G P + +++ L K G+ +
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
V++ + G D + +I +GK G ++ ++F M K G TY+ +I
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 132 SNSSVQQILKRFNNDWVPA--FGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWEL 189
S++ V Q+++ N+ P FF+W+ G + +N ++ +L + K+ + L
Sbjct: 66 SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125
Query: 190 VEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVK 249
+ ++ K + T + V L K GK EDAI F+ + +F D + ++ AL
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS 185
Query: 250 GNSVEHAHGVLLEFKSLIPLNSGS-FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFS 308
V+ A GV+ K +I N S + L+ GW RN +AR+V++DMK G PD+F
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245
Query: 309 YNSFIESYCHDKDFR-------KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
+NS + C R + ++ EM P +++Y I++ LG+ ++ ++
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
++ E+MK G PDT Y ++ +L GR + ++M ++G + Y +I
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365
Query: 422 CAHSREETALRLLKEMEERS 441
C R AL+L ++M+ S
Sbjct: 366 CGVERVNFALQLFEKMKRSS 385
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 13/256 (5%)
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH---DKDFRKV 325
L+ FN ++ ++ + ++ D+++ D +++ E+ ++D +
Sbjct: 101 LHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGI 160
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
++L++ S CP + T T ++ AL G + +AL V K + Y SL+F
Sbjct: 161 FKILDKFS---CPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFG 217
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREET-------ALRLLKEME 438
+K+A V +DM GI D+ +N++++ C + AL ++ EM
Sbjct: 218 WSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMR 277
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
+P +Y+ E M ++ PD G++ +V L +G+
Sbjct: 278 SYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFG 337
Query: 499 HACSFFEELISRGLTP 514
+E+I RG P
Sbjct: 338 KGNQIVDEMIERGFRP 353
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 160/338 (47%), Gaps = 11/338 (3%)
Query: 183 FDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNM 242
FD + L EM + ++ T+VL + K K + I + +M+ G+ D + +
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 243 LMDALVKGNSVEHAH---GVLLEFK---SLIPLNSGSFNILMNGWCRVRNFDQARKVMED 296
L+ + + + A G +++ S++ L S L+NG+C+ F +A +++
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS-----LLNGFCQGNRFQEAVSLVDS 174
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
M GFVP+V YN+ I C ++D +V M + G +AVTY ++ L +G+
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
+ A + M I P+ F+++LI K G L +A +++++M ++ +V +V TYN+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
+I+ C H A + M + C PD+ TY+ M
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
L D T++ L+HG ++GKL+ A F ++ G++P
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 164/384 (42%), Gaps = 36/384 (9%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G+ S +++ + F LV+ M + V+ L K
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILM 278
+A+ F M++ G+ D N L+ L A +L + K I N F L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ + + N +AR + ++M VP+VF+YNS I +C + + M GC
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+ VTY ++ K+ ++ ++++ +M G+V D Y++LI +AG+L A V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
F M G+ D+VTYN ++ C + + E AL ++++++
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ-------------------- 421
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGA 518
K+++ D+ T+++++ GL ++ KL A F L +G+ P A
Sbjct: 422 ---------------KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 519 LKQLVKDLEAKSMLKEKEHIEKLM 542
++ L K + +E + + + M
Sbjct: 467 YITMISGLCRKGLQREADKLCRRM 490
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 146/342 (42%), Gaps = 22/342 (6%)
Query: 120 VAQALDGHGFQ----VSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMID 175
+ ++DG GF + N+ + + K N D A F + + G YN +I
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCK--NRDLNNALEVF-YCMEKKGIRADAVTYNTLIS 227
Query: 176 ILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM 235
L S + L+ +M K + + T ++ K G +A ++ M V
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL--NSGSF------NILMNGWCRVRNF 287
+ N L++ HG L + K + L + G F N L+ G+C+ +
Sbjct: 288 NVFTYNSLINGFC-------IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ K+ +M G V D F+YN+ I YC +V M + G P+ VTY I+
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ L G++ +AL + E ++ + D Y+ +I L + +LK+A +F + ++G+
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
D + Y TMIS C + A +L + M+E P Y
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 35/261 (13%)
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
++ FD + M+ G D++S+ I +C +L +M + G P+ V
Sbjct: 91 KMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIV 150
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
T ++ + + +A+ + + M G VP+ Y+++I L K L +A +VF M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
K+GI D VTYNT+IS R A RLL++M +R
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK--------------------- 249
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
+ P++ F+ L+ K G L A + ++E+I R + P L
Sbjct: 250 --------------IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 523 VKDLEAKSMLKEKEHIEKLMT 543
+ L + +++ LM
Sbjct: 296 INGFCIHGCLGDAKYMFDLMV 316
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 192/433 (44%), Gaps = 45/433 (10%)
Query: 136 VQQILKRFNNDWVPAFGFFTWA-KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMA 194
V I ++ N D A F +A K+ G+ H+ + Y+ ++ L +++ FD V L+ ++
Sbjct: 53 VSMITQQQNIDL--ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLR 110
Query: 195 KHEGYVTL--YTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMD------- 245
+ +LR AG++E ++ F R+ +FGV +LN L++
Sbjct: 111 NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQR 170
Query: 246 -----------------------------ALVKGNSVEHAHGVLLEFKS--LIPLNSGSF 274
AL K N +E A+ VL E S L+P N ++
Sbjct: 171 FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVP-NLVTY 229
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
++ G+ + + A++V+E+M + G+ PD +Y ++ YC F + V+++M +
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
N PN VTY +++ AL K + +A ++++M +PD+ +I L + ++ +
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
AC ++ M K + D +T+I C R A +L E E+ S P L TY+
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIA 408
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M++ P+ T+++L+ GL K+G + EE++ G P
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468
Query: 515 RHGALKQLVKDLE 527
L + L+
Sbjct: 469 NKTTFLILFEGLQ 481
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ Y +++D K F ++++M K+E T ++R L K K +A
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMN 279
F M E D++ ++DAL + + V+ A G+ + + +P N+ + L++
Sbjct: 316 RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA-LLSTLIH 374
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
C+ +ARK+ ++ E G +P + +YN+ I C + + ++ ++M E C P
Sbjct: 375 WLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
NA TY +++ L K G + + + V E+M G P+ + L L K G+ +DA +
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +MI L K K + +EM + KV+ L + K ++A +R+M
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 358
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
+ D A L+ L+ L K V A + EF K IP + ++N L+ G C
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELT 417
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A ++ +DM E P+ F+YN IE + + ++ +VLEEM E GC PN T+ I+
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 349 FALGKAGQLSQALEVYEKMKSHGIV 373
L K G+ A+++ +G V
Sbjct: 478 EGLQKLGKEEDAMKIVSMAVMNGKV 502
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 156 WAKTQTGYEHSPELY--NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
+ ++ + +P ++ NL++ L K + + +++++E+ L T T +L
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSG 272
G E A M + G D +LMD K A V+ + K+ I N
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
++ +++ C+ + +AR + ++M E F+PD I++ C D + + +M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 333 SENGC----------------------------------PPNAVTYTIVMFALGKAGQLS 358
+N C P+ +TY ++ + + G+L+
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
+A +++ M P+ Y+ LI L K G +K+ V E+M + G + T+ +
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 419 STACAHSREETALRLLKEMEERSCKPDLETYH 450
+EE A++++ M + K D E++
Sbjct: 478 EGLQKLGKEEDAMKIV-SMAVMNGKVDKESWE 508
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 1/364 (0%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
GY Y+ +++ + D VW+L+E M + Y ++ L + K +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
AF M G+ DT L+D K + A E S I + ++ +++G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+C++ + +A K+ +M G PD ++ I YC + +V M + GC PN
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VTYT ++ L K G L A E+ +M G+ P+ Y+S++ L K+G +++A +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
+ G+ D VTY T++ C + A +LKEM + +P + T++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
M ++P+ TF+ LV L A + ++++ SRG+ P +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 521 QLVK 524
LVK
Sbjct: 636 NLVK 639
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 202/458 (44%), Gaps = 29/458 (6%)
Query: 101 DYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQ 160
++V I+ ++K + P + ++L + + + +L + D+ FF WA+++
Sbjct: 57 EFVHQITNVIKLRRAEP--LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR 114
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH------EGYVTLYTMTK------- 207
+ + E ++I + SK+ + L+ + + +V + +
Sbjct: 115 R--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWG 172
Query: 208 --------VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
+ L G +A F +M +G+ + + N+ + L K + + A +
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAI 231
Query: 260 LL--EFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
++ EF + + N S+NI+++ C++ +A ++ M+ G+ PDV SY++ + Y
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 317 CHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDT 376
C + KV +++E M G PN+ Y ++ L + +L++A E + +M GI+PDT
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
Y++LI K G ++ A F +M + I DV+TY +IS C A +L E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
M + +PD T+ HM + SP++ T++ L+ GL K G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
LD A E+ GL P +V L ++E
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 184/430 (42%), Gaps = 45/430 (10%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWE---LVEEMAKHEGYVTLYTMTKVLRRLTK- 214
T + P ++++ +L +F L+ E + E+M + +++ + L RL+K
Sbjct: 167 TYKDWGSDPRVFDVFFQVL---VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223
Query: 215 AGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL--EFKSLIPLNSG 272
K AI FR E GV + A+ N+++ + + ++ AH +LL E K P +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVI 282
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKE--------------------------------- 299
S++ ++NG+CR D+ K++E MK
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 300 --HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
G +PD Y + I+ +C D R + EM P+ +TYT ++ + G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
+A +++ +M G+ PD+ ++ LI KAG +KDA V M + G +VVTY T+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
I C ++A LL EM + +P++ TY+ L
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEH 537
+ D T++ L+ KSG++D A +E++ +GL P L+ ML++ E
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 538 IEKLMTPPSI 547
+ M I
Sbjct: 583 LLNWMLAKGI 592
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 3/282 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Q G + Y +ID L K + D EL+ EM K ++T ++ L K+G E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNIL 277
+A+ + G++ DT LMDA K ++ A +L E K L P +FN+L
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP-TIVTFNVL 567
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
MNG+C + K++ M G P+ ++NS ++ YC + + + ++M G
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
P+ TY ++ KA + +A ++++MK G YS LI K + +A +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
VF+ M ++G+ D ++ T R +T + + E+ E
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE- 262
T T+++ KAG +DA M + G + L+D L K ++ A+ +L E
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+K + N ++N ++NG C+ N ++A K++ + + G D +Y + +++YC +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
K ++L+EM G P VT+ ++M G L ++ M + GI P+ ++SL
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
+ LK A +++DM +G+ D TY ++ C + A L +EM+ +
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 443 KPDLETY 449
+ TY
Sbjct: 663 SVSVSTY 669
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T T ++ L K G + A M + G+ + N +++ L K ++E A ++ EF
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 264 KSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
++ + ++ ++ LM+ +C+ D+A++++++M G P + ++N + +C
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
+++L M G PNA T+ ++ L A +Y+ M S G+ PD Y +L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
+ KA +K+A +F++M +G V TY+ +I + A + +M
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 443 KPDLETY 449
D E +
Sbjct: 698 AADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 1/364 (0%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
GY Y+ +++ + D VW+L+E M + Y ++ L + K +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
AF M G+ DT L+D K + A E S I + ++ +++G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+C++ + +A K+ +M G PD ++ I YC + +V M + GC PN
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VTYT ++ L K G L A E+ +M G+ P+ Y+S++ L K+G +++A +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
+ G+ D VTY T++ C + A +LKEM + +P + T++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
M ++P+ TF+ LV L A + ++++ SRG+ P +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 521 QLVK 524
LVK
Sbjct: 636 NLVK 639
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 202/458 (44%), Gaps = 29/458 (6%)
Query: 101 DYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQ 160
++V I+ ++K + P + ++L + + + +L + D+ FF WA+++
Sbjct: 57 EFVHQITNVIKLRRAEP--LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR 114
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH------EGYVTLYTMTK------- 207
+ + E ++I + SK+ + L+ + + +V + +
Sbjct: 115 R--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWG 172
Query: 208 --------VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
+ L G +A F +M +G+ + + N+ + L K + + A +
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAI 231
Query: 260 LL--EFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
++ EF + + N S+NI+++ C++ +A ++ M+ G+ PDV SY++ + Y
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 317 CHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDT 376
C + KV +++E M G PN+ Y ++ L + +L++A E + +M GI+PDT
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
Y++LI K G ++ A F +M + I DV+TY +IS C A +L E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
M + +PD T+ HM + SP++ T++ L+ GL K G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
LD A E+ GL P +V L ++E
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 184/430 (42%), Gaps = 45/430 (10%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWE---LVEEMAKHEGYVTLYTMTKVLRRLTK- 214
T + P ++++ +L +F L+ E + E+M + +++ + L RL+K
Sbjct: 167 TYKDWGSDPRVFDVFFQVL---VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223
Query: 215 AGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL--EFKSLIPLNSG 272
K AI FR E GV + A+ N+++ + + ++ AH +LL E K P +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVI 282
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKE--------------------------------- 299
S++ ++NG+CR D+ K++E MK
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 300 --HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
G +PD Y + I+ +C D R + EM P+ +TYT ++ + G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
+A +++ +M G+ PD+ ++ LI KAG +KDA V M + G +VVTY T+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
I C ++A LL EM + +P++ TY+ L
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEH 537
+ D T++ L+ KSG++D A +E++ +GL P L+ ML++ E
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 538 IEKLMTPPSI 547
+ M I
Sbjct: 583 LLNWMLAKGI 592
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 3/282 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Q G + Y +ID L K + D EL+ EM K ++T ++ L K+G E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNIL 277
+A+ + G++ DT LMDA K ++ A +L E K L P +FN+L
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP-TIVTFNVL 567
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
MNG+C + K++ M G P+ ++NS ++ YC + + + ++M G
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
P+ TY ++ KA + +A ++++MK G YS LI K + +A +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
VF+ M ++G+ D ++ T R +T + + E+ E
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE- 262
T T+++ KAG +DA M + G + L+D L K ++ A+ +L E
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+K + N ++N ++NG C+ N ++A K++ + + G D +Y + +++YC +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
K ++L+EM G P VT+ ++M G L ++ M + GI P+ ++SL
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
+ LK A +++DM +G+ D TY ++ C + A L +EM+ +
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 443 KPDLETY 449
+ TY
Sbjct: 663 SVSVSTY 669
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T T ++ L K G + A M + G+ + N +++ L K ++E A ++ EF
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 264 KSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
++ + ++ ++ LM+ +C+ D+A++++++M G P + ++N + +C
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
+++L M G PNA T+ ++ L A +Y+ M S G+ PD Y +L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
+ KA +K+A +F++M +G V TY+ +I + A + +M
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 443 KPDLETY 449
D E +
Sbjct: 698 AADKEIF 704
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 176/379 (46%), Gaps = 3/379 (0%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G + +N++I+ L ++ +M K T+ ++ + + DA
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMN 279
++ +M E G D A N ++D+L K V A +E K + P N ++ L+N
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVN 233
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G C + A +++ DM + P+V +Y++ ++++ + + ++ EEM P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
+ VTY+ ++ L ++ +A ++++ M S G + D Y++LI KA R++D +F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
+M ++G+V + VTYNT+I + A +M+ PD+ TY+
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGAL 519
E M K ++ D+ T++ ++ G+ K+GK++ A S F L +GL P
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 520 KQLVKDLEAKSMLKEKEHI 538
++ L K +L E E +
Sbjct: 474 TTMMSGLCTKGLLHEVEAL 492
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 155/328 (47%), Gaps = 1/328 (0%)
Query: 188 ELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL 247
+L +M K + ++ ++L + K K++ I+ ++M+ G+ D N++++
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 248 VKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
V A +L + L + + L+NG+CR A +++ M E G+ PD+
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
+YN+ I+S C K +E+ G PN VTYT ++ L + + S A +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M I P+ YS+L+ K G++ +A ++FE+M + I D+VTY+++I+ C H R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ A ++ M + C D+ +Y+ M + L + T++
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTP 514
L+ G ++G +D A FF ++ G++P
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 159/357 (44%), Gaps = 6/357 (1%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
+ GY+ YN +ID L K+K + ++ +E+ + + T T ++ L + +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNIL 277
DA M + + + + L+DA VK V A + E + I + +++ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+NG C D+A ++ + M G + DV SYN+ I +C K ++ EMS+ G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
N VTY ++ +AG + +A E + +M GI PD Y+ L+ L G L+ A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
+FEDM K+ + D+VTY T+I C + E A L + + KPD+ TY
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 458 XX-----XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
E + KND + G +L ++K +A S +++ S
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKS 538
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 141 KRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV 200
KR N+ AF FF + + G + Y +++ L S + L+ +M K +
Sbjct: 204 KRVND----AFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV- 259
+ T + +L K GK +A F M +D D + L++ L + ++ A+ +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 260 -LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
L+ K + + S+N L+NG+C+ + + K+ +M + G V + +YN+ I+ +
Sbjct: 319 DLMVSKGCLA-DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
D K + +M G P+ TY I++ L G+L +AL ++E M+ + D
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAH 424
Y+++I + K G++++A +F + +G+ D+VTY TM+S C
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 2/264 (0%)
Query: 283 RVRN--FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
R+R+ + A + DM + P + +N + + K + V + ++M G +
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
T+ IV+ Q+S AL + KM G PD SL+ + R+ DA + +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
M + G D+V YN +I + C R A KE+E + +P++ TY
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
M K ++P++ T+S L+ K+GK+ A FEE++ + P
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 521 QLVKDLEAKSMLKEKEHIEKLMTP 544
L+ L + E + LM
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVS 323
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 131/284 (46%), Gaps = 8/284 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ ++D K+ EL EEM + + T + ++ L + ++A F M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
G D + N L++ K VE + E + L+ N+ ++N L+ G+ + +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGFFQAGDV 381
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D+A++ M G PD+++YN + C + + K + E+M + + VTYT V
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + K G++ +A ++ + G+ PD Y++++ L G L + ++ M ++G+
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 408 VRDVVTYNTMISTACAHSREET-----ALRLLKEMEERSCKPDL 446
+++ T + T A ++ A LLK+++ CK L
Sbjct: 502 MKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL 545
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 5/201 (2%)
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
+L+ A++++ M P ++ L+ + K + + + M GI D+ T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
+I+ C + AL +L +M + +PD T + M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 476 DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE- 534
PD+ ++ ++ L K+ +++ A FF+E+ +G+ P LV L S +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 535 ----KEHIEKLMTPPSIRFTS 551
+ I+K +TP I +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSA 265
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 179/397 (45%), Gaps = 2/397 (0%)
Query: 153 FFTWAKTQT-GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRR 211
+ W + Q G H+ N++++ + L + +M K ++ T +L
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 212 LTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLN 270
+ + DA+ F +M G + N ++D L K V++A +L K I +
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
++N L++G C + A +++ M + PDVF++N+ I++ + + ++ E
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
EM P+ VTY+++++ L +L +A E++ M S G PD YS LI K+
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+++ +F +M ++G+VR+ VTY +I C + A + + M P++ TY+
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
M KN + D+ T+++++ G+ K+G++ A + L +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 511 GLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSI 547
GL P ++ L K + +E + + + M I
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 147/313 (46%), Gaps = 7/313 (2%)
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
+++L ++K K++ I + +M+ G+ + N+L++ + + + A L
Sbjct: 85 SRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL---GK 141
Query: 266 LIPL----NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
+I L + +F L+NG+CR A + + M G+ P+V YN+ I+ C K
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+L M ++G P+ VTY ++ L +G+ S A + M I PD +++
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
LI K GR+ +A + +E+M ++ + D+VTY+ +I C +SR + A + M +
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
C PD+ TY M + + + T+++L+ G ++GKL+ A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 502 SFFEELISRGLTP 514
F ++ G+ P
Sbjct: 382 EIFRRMVFCGVHP 394
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 37/324 (11%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
GY+ + +YN +ID L KSK D +L+ M K + T ++ L +G+ DA
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIP----------- 268
M + + D N L+DA VK V A E +SL P
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 269 -----------------LNSGSF------NILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
++ G F +IL+NG+C+ + + K+ +M + G V +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
+Y I+ YC +++ M G PN +TY +++ L G++ +AL +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
M+ +G+ D Y+ +I + KAG + DA D++ + QG++ D+ TY TM+
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 426 REETALRLLKEMEERSCKPDLETY 449
A L ++M+E P+ E Y
Sbjct: 481 LRREADALFRKMKEDGILPN-ECY 503
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 4/282 (1%)
Query: 268 PLNS-GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD 326
PL S F+ L++ +++ +D + E M+ G ++ + N + +C
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
L +M + G P+ VT+ ++ + ++ AL ++++M G P+ Y+++I L
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 387 GKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDL 446
K+ ++ +A D+ M K GI DVVTYN++IS C+ R A R++ M +R PD+
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 447 ETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE 506
T++ E M + L PD+ T+SLL++GL +LD A F
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 507 LISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
++S+G P L+ KS K+ EH KL S R
Sbjct: 317 MVSKGCFPDVVTYSILINGY-CKS--KKVEHGMKLFCEMSQR 355
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 191/401 (47%), Gaps = 6/401 (1%)
Query: 131 VSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELV 190
+S+ S ++KR D F A Q G+ H+ Y++++D L + K F V ++
Sbjct: 54 ISHESAVSLMKR-ERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAIL 112
Query: 191 EEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFG-VDMDTAALNMLMDALVK 249
+M ++R +++ H+ + F ++ V A++ ++ L+
Sbjct: 113 HQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLID 172
Query: 250 GNSVEHAHGVLLEFKSLIPL--NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGF-VPDV 306
V + +LL K + L N+ FNIL+ C+ + + A V+E+MK G P+
Sbjct: 173 SGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNS 232
Query: 307 FSYNSFIES-YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
+Y++ ++ + H + V+ + +S+ G P+ VT+ +++ +AG++ +A ++ +
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD 292
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
MK +G P+ YS+L+ K G++++A F+++ K G+ D V Y T+++ C +
Sbjct: 293 FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Query: 426 REETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFS 485
+ A++LL EM+ C+ D TY+ + + + G++
Sbjct: 353 ETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
Query: 486 LLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
++++ L +G+L+ A F + RG+ P H +LV L
Sbjct: 413 IILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 136/300 (45%), Gaps = 3/300 (1%)
Query: 213 TKAGKHEDAIAAFRRMKEFGVDM-DTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPL 269
K G A MK G+ ++ + LMD L + + A + + K I
Sbjct: 207 CKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISP 266
Query: 270 NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
+ +FN+++NG+CR ++A+K+++ MK++G P+V++Y++ + +C ++ Q
Sbjct: 267 DPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTF 326
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
+E+ + G + V YT +M + G+ +A+++ +MK+ DT Y+ ++ L
Sbjct: 327 DEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSE 386
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
GR ++A + + +G+ + +Y +++ C + E A++ L M ER P T+
Sbjct: 387 GRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATW 446
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ + L P ++ +V + K KL H + L+S
Sbjct: 447 NELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 111/279 (39%), Gaps = 34/279 (12%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
++ G P +N+MI+ ++ + ++++ M K+ +Y + ++ K GK
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILM 278
++A F +K+ G+ +DT LM
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLM---------------------------------- 345
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
N +CR D+A K++ +MK D +YN + + + Q+L++ G
Sbjct: 346 NCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVH 405
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
N +Y I++ AL G+L +A++ M GI P ++ L+ L ++G + V
Sbjct: 406 LNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
+ G++ ++ ++ + C + LL +
Sbjct: 466 LIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 171/409 (41%)
Query: 120 VAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGK 179
+ ++L G +S V +L R N FF WA + G Y++++ LG+
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 180 SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
K F + ++++ M L +T + + AI F + FGV T +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 240 LNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKE 299
N L+ L + + V A V K IP +S S+NI+++GW ++ ++ KV+++M E
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVE 283
Query: 300 HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQ 359
GF PD SY+ IE ++ + + G P+A Y ++ A +
Sbjct: 284 SGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE 343
Query: 360 ALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIS 419
++ Y +M P+ YS L+ L K ++ DA ++FE+M +G++ + +
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLK 403
Query: 420 TACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSP 479
C++ A+ + ++ + C+ Y + M ++
Sbjct: 404 PLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPS 463
Query: 480 DLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEA 528
D+ + +V GL G L++A EE + +G P +L L A
Sbjct: 464 DVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMA 512
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 153/317 (48%), Gaps = 8/317 (2%)
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-- 263
T ++ K GK +A +A+R M + G+ D +LM+ L K + V+ A + E
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
K + P + S+ +L+NG+ ++ N +A + ++M E G P+V YN + +C +
Sbjct: 621 KGIAP-DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
K ++L+EMS G PNAVTY ++ K+G L++A ++++MK G+VPD+ Y++L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE---- 439
+ ++ A +F K+G +N +I+ + E +L + +
Sbjct: 740 DGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
R KP+ TY+ M +L P + T++ L++G K G+
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 500 ACSFFEELISRGLTPRH 516
F+E I+ G+ P H
Sbjct: 859 MFPVFDEAIAAGIEPDH 875
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 169/381 (44%), Gaps = 36/381 (9%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+L+ID L K +N D LV EM H + Y + ++K G E A A F M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNS------------------ 271
G+ A L++ + +V + +L+E K + S
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 272 GSFNI---LMNGWCR---------VRNFDQ------ARKVMEDMKEHGFVPDVFSYNSFI 313
G++NI ++ CR ++ F Q A +V+++MKE G PD+F YNS I
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
K + L EM ENG PNA TY + +A + + A + ++M+ G++
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
P+ + LI K G++ +AC + M QGI+ D TY +++ + + + A +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
+EM + PD+ +Y + M + L+P++ +++L+ G +
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 494 SGKLDHACSFFEELISRGLTP 514
SG+++ A +E+ +GL P
Sbjct: 675 SGEIEKAKELLDEMSVKGLHP 695
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 175/411 (42%), Gaps = 45/411 (10%)
Query: 182 NFDLVWELVEEMAKHEGYVTL-YTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAAL 240
N D +L E M +G V L YT ++ L K + EDA + M GV +D
Sbjct: 257 NVDGALKLKESMI-CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315
Query: 241 NMLMDALVKGNSVEHAHGVLLEFKS----------------------------------- 265
++L+D L+KG + + A G++ E S
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 266 --LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
LIP + ++ L+ G+CR +N Q +++ +MK+ V ++Y + ++ C D
Sbjct: 376 SGLIP-QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+++EM +GC PN V YT ++ + + A+ V ++MK GI PD Y+SLI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
L KA R+ +A +M + G+ + TY IS S +A + +KEM E
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
P+ M + D T+++L++GL K+ K+D A
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 504 FEELISRGLTPRHGALKQLVKDLEAKSMLKEK-----EHIEKLMTPPSIRF 549
F E+ +G+ P + L+ +++ E +E+ +TP I +
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 175/404 (43%), Gaps = 25/404 (6%)
Query: 114 HSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPEL--YN 171
S E V ++ DG F + I K + + V F + G E P L
Sbjct: 139 RCSQEFVGKSDDGVLFGILFDG--YIAKGYIEEAVFVF------SSSMGLELVPRLSRCK 190
Query: 172 LMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE-DAIAAFRRMKE 230
+++D L + DL W++ + M + + T ++ +AG + F+ KE
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 231 FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQA 290
F TA LN+ D +K G L+PL ++++L++G C+++ + A
Sbjct: 251 F----RTATLNV--DGALKLKESMICKG-------LVPLKY-TYDVLIDGLCKIKRLEDA 296
Query: 291 RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFA 350
+ ++ +M G D +Y+ I+ ++ ++ EM +G Y +
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356
Query: 351 LGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD 410
+ K G + +A +++ M + G++P Y+SLI + ++ ++ +M K+ IV
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 411 VVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXE 470
TY T++ C+ + A ++KEM C+P++ Y +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 471 HMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + ++PD+ ++ L+ GL K+ ++D A SF E++ GL P
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 150/374 (40%), Gaps = 48/374 (12%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G + Y ++++ L K+ D E+ EM +++ ++ +K G + A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMN 279
+ F M E G+ + NML+ + +E A +L + K L P N+ ++ +++
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP-NAVTYCTIID 705
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP- 338
G+C+ + +A ++ ++MK G VPD F Y + ++ C D + + ++ GC
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCAS 764
Query: 339 --------------------------------------PNAVTYTIVMFALGKAGQLSQA 360
PN VTY I++ L K G L A
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
E++ +M++ ++P Y+SL+ K GR + VF++ GI D + Y+ +I+
Sbjct: 825 KELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Query: 421 ACAHSREETALRLLKEMEERS-----CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
AL L+ +M ++ CK + T E+M +
Sbjct: 885 FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 476 DLSPDLGTFSLLVH 489
PD T L++
Sbjct: 945 QYIPDSATVIELIN 958
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 123/324 (37%), Gaps = 48/324 (14%)
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCR 283
++ M E V D +ML+ A + +V+ VL FK+ + + N+
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--FKTEKEFRTATLNV------- 258
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
D A K+ E M G VP ++Y+ I+ C K +L EM G + T
Sbjct: 259 ----DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHT 314
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
Y++++ L K A + +M SHGI Y I ++ K G ++ A +F+ M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
G++ Y ++I C LL EM++R+
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV-------------------- 414
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
+SP T+ +V G+ SG LD A + +E+I+ G P L+
Sbjct: 415 -------------ISPY--TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 524 KDLEAKSMLKEKEHIEKLMTPPSI 547
K S + + K M I
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGI 483
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 155/382 (40%), Gaps = 25/382 (6%)
Query: 79 VDAHIL-DAKPK--LVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSS 135
VD IL DAK L+ F +K D E I ++ +P++ + + +GF +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS-KLGN 642
Query: 136 VQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAK 195
+Q+ F+ + G + +YN+++ +S + EL++EM+
Sbjct: 643 MQKASSIFDE------------MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 196 HEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEH 255
+ T ++ K+G +A F MK G+ D+ L+D + N VE
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 256 AHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGF----VPDVFSYNS 311
A + K ++ FN L+N + + +V+ + + F P+ +YN
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 312 FIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
I+ C + + ++ +M P +TYT ++ K G+ ++ V+++ + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD-----VVTYNTMISTACAHSR 426
I PD YS +I K G A + + M + V D + T ++S
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 427 EETALRLLKEMEERSCKPDLET 448
E A ++++ M PD T
Sbjct: 931 MEVAEKVMENMVRLQYIPDSAT 952
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN+MID L K N + EL +M T+ T T +L K G+ + F
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG------SFNILMNGWCR 283
G++ D +++++A +K A ++ + + ++ G + L++G+ +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
V + A KVME+M ++PD + I C + R
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 164/359 (45%), Gaps = 12/359 (3%)
Query: 158 KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
K +T E P +N ++ LG++ + + +LV +M + + + T+ ++ L K+ +
Sbjct: 287 KNKTPLEAPP--FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRR 344
Query: 218 HEDAIAAFRRMKEFGVD------MDTAALNMLMDALVKGNSVEHAHGVLLEFK---SLIP 268
++A+ F +M+ D D+ N L+D L K ++ A +L+ K +P
Sbjct: 345 VDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP 404
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
N+ ++N L++G+CR + A++V+ MKE P+V + N+ + C
Sbjct: 405 -NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
+M + G N VTY ++ A + +A+ YEKM G PD Y +LI L +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
R DA V E + + G D++ YN +I C + E +L +ME+ KPD T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
Y+ E M ++ L P + T+ ++ G+LD A F+++
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +ID ++ + E+V M + E + T+ ++ + + A+ F M+
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLEFKSLIPLNSGSFNILMNGWCRVRN 286
+ GV + L+ A ++VE A + +LE + ++ + L++G C+VR
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE--AGCSPDAKIYYALISGLCQVRR 526
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
A +V+E +KE GF D+ +YN I +C + KV ++L +M + G P+++TY
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ GK + E+M+ G+ P Y ++I G L +A +F+DM
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 407 IVR-DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
V + V YN +I+ AL L +EM+ + +P++ETY+
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNIL 277
E A+ + +M E G D L+ L + A V+ + K L+ ++N+L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+ +C N ++ +++ DM++ G PD +YN+ I + KDF V++++E+M E+G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV-PDTPFYSSLIFILGKAGRLKDAC 396
P TY V+ A G+L +AL++++ M H V P+T Y+ LI K G A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+ E+M + + +V TYN + ++ ET L+L+ EM E
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 157/361 (43%), Gaps = 47/361 (13%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV--TLYTMTKVLRRLTKAG--KHEDA 221
+ ++ N+++D+L ++ D +++++EM + E T VL + K E
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI 243
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNG 280
IA R GV ++ L + +L K A +L + K+ PL + FN L++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS- 302
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C RN D +R ++ ++ +M E P+
Sbjct: 303 -CLGRNMDISR---------------------------------MNDLVLKMDEVKIRPD 328
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMK------SHGIVPDTPFYSSLIFILGKAGRLKD 394
VT I++ L K+ ++ +ALEV+E+M+ + I D+ +++LI L K GRLK+
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 395 ACDVFEDMP-KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
A ++ M ++ V + VTYN +I C + ETA ++ M+E KP++ T +
Sbjct: 389 AEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M K + ++ T+ L+H ++ A ++E+++ G +
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 514 P 514
P
Sbjct: 509 P 509
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEG----YVTLYTMTKVLRRLTKAGKHEDAIAAF 225
YN++I + N + V+E++ +M K EG +T T+ GKH+D +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEK-EGKKPDSITYNTLISFF------GKHKDFESVE 601
Query: 226 R---RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNG 280
R +M+E G+D ++DA ++ A + + S + N+ +NIL+N
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
+ ++ NF QA + E+MK P+V +YN+ + + ++++EM E
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 164/359 (45%), Gaps = 12/359 (3%)
Query: 158 KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
K +T E P +N ++ LG++ + + +LV +M + + + T+ ++ L K+ +
Sbjct: 287 KNKTPLEAPP--FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRR 344
Query: 218 HEDAIAAFRRMKEFGVD------MDTAALNMLMDALVKGNSVEHAHGVLLEFK---SLIP 268
++A+ F +M+ D D+ N L+D L K ++ A +L+ K +P
Sbjct: 345 VDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP 404
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
N+ ++N L++G+CR + A++V+ MKE P+V + N+ + C
Sbjct: 405 -NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
+M + G N VTY ++ A + +A+ YEKM G PD Y +LI L +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
R DA V E + + G D++ YN +I C + E +L +ME+ KPD T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
Y+ E M ++ L P + T+ ++ G+LD A F+++
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 2/229 (0%)
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNIL 277
E A+ + +M E G D L+ L + A V+ + K L+ ++N+L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+ +C N ++ +++ DM++ G PD +YN+ I + KDF V++++E+M E+G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV-PDTPFYSSLIFILGKAGRLKDAC 396
P TY V+ A G+L +AL++++ M H V P+T Y+ LI K G A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
+ E+M + + +V TYN + ++ ET L+L+ EM E+SC+P+
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 157/361 (43%), Gaps = 47/361 (13%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV--TLYTMTKVLRRLTKAG--KHEDA 221
+ ++ N+++D+L ++ D +++++EM + E T VL + K E
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI 243
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNG 280
IA R GV ++ L + +L K A +L + K+ PL + FN L++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS- 302
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C RN D +R ++ ++ +M E P+
Sbjct: 303 -CLGRNMDISR---------------------------------MNDLVLKMDEVKIRPD 328
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMK------SHGIVPDTPFYSSLIFILGKAGRLKD 394
VT I++ L K+ ++ +ALEV+E+M+ + I D+ +++LI L K GRLK+
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 395 ACDVFEDMP-KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
A ++ M ++ V + VTYN +I C + ETA ++ M+E KP++ T +
Sbjct: 389 AEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M K + ++ T+ L+H ++ A ++E+++ G +
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 514 P 514
P
Sbjct: 509 P 509
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEG----YVTLYTMTKVLRRLTKAGKHEDAIAAF 225
YN++I + N + V+E++ +M K EG +T T+ GKH+D +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEK-EGKKPDSITYNTLISFF------GKHKDFESVE 601
Query: 226 R---RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNG 280
R +M+E G+D ++DA ++ A + + S + N+ +NIL+N
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ ++ NF QA + E+MK P+V +YN+ + + ++++EM E C PN
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 341 AVTYTIVMFALGKAGQL 357
+T I+M L + +L
Sbjct: 722 QITMEILMERLSGSDEL 738
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 160/364 (43%), Gaps = 19/364 (5%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ Y+ +++ L + +L + L EEM + +YT T ++ KAG E A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMN 279
F M+E G + L+ A +K V +A+ + S +P N +++ L++
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSALID 596
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPD----------------VFSYNSFIESYCHDKDFR 323
G C+ ++A ++ E M VPD V +Y + ++ +C
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ ++L+ MS GC PN + Y ++ L K G+L +A EV +M HG YSSLI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
K R A V M + +VV Y MI C + + A +L++ MEE+ C+
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
P++ TY E M ++P+ T+ +L+ K+G LD A +
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 504 FEEL 507
EE+
Sbjct: 837 LEEM 840
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 161/356 (45%), Gaps = 21/356 (5%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM- 228
Y +I K+K EL E M + T + ++ KAG+ E A F RM
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 229 --KEF-GVDM------------DTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNS 271
K+ VDM + L+D K + VE A +L + + P N
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP-NQ 674
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++ L++G C+V D+A++V +M EHGF +++Y+S I+ Y K +VL +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M EN C PN V YT ++ L K G+ +A ++ + M+ G P+ Y+++I G G+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
++ ++ E M +G+ + VTY +I C + + A LL+EM++ Y
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ + ++D +P L + LL+ L K+ +L+ A EE+
Sbjct: 855 --VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 169/409 (41%), Gaps = 62/409 (15%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH------- 218
SP+++N ++ S + ++L+++M K G++ Y + +L K
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC-GHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNI 276
+ A A+ M GV ++ ++ L E A V+ E + IP ++ +++
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP-DTSTYSK 488
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
++N C + A + E+MK G V DV++Y ++S+C + + EM E G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
C PN VTYT ++ A KA ++S A E++E M S G +P+ YS+LI KAG+++ AC
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 397 DVFEDMPKQGIVRD----------------VVTYNTMISTACAHSREETALRLLKEMEER 440
+FE M V D VVTY ++ C R E A +LL M
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 441 SCKPD-----------------------------------LETYHPXXXXXXXXXXXXXX 465
C+P+ L TY
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M +N +P++ ++ ++ GL K GK D A + + +G P
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 182/458 (39%), Gaps = 49/458 (10%)
Query: 130 QVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWEL 189
++S S V ++L R FF WA Q GY+H+ +YN ++D++ + + + E
Sbjct: 129 KLSESLVIEVL-RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEF 187
Query: 190 VEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVK 249
++++ + V + ++R+ + G A+ R+K+F + N L+ A +K
Sbjct: 188 LQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLK 247
Query: 250 GNSVEHAHGVLLEFKSLIPLNSGSFNILMNGW--CRVRNFDQARKVMEDMKEHGFVPDVF 307
+ ++ A + E SL L F + + C+V + +A ++E FVPD
Sbjct: 248 ADRLDSASLIHREM-SLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTV 303
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
Y I C F + L M C PN VTY+ ++ QL + V M
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363
Query: 368 KSHGIVPDTPFYSSLI--------------------------------FILGKAGRLKDA 395
G P ++SL+ ++G KD+
Sbjct: 364 MMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDS 423
Query: 396 --CDV-------FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDL 446
CD+ + +M G+V + + ++ C+ + E A +++EM + PD
Sbjct: 424 LNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDT 483
Query: 447 ETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE 506
TY E M + L D+ T++++V K+G ++ A +F E
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 507 LISRGLTPRHGALKQLVKD-LEAKSMLKEKEHIEKLMT 543
+ G TP L+ L+AK + E E +++
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 7/297 (2%)
Query: 157 AKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAG 216
A + G E + +Y+ +ID L K D E+ EM++H TLYT + ++ R K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSF 274
+ + A +M E + ++D L K + A+ + ++E K P N ++
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP-NVVTY 782
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
+++G+ + + +++E M G P+ +Y I+ C + +LEEM +
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
P + Y V+ K + ++L + +++ P Y LI L KA RL+
Sbjct: 843 THWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 395 ACDVFEDMP--KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
A + E++ +V TYN++I + C ++ ETA +L EM ++ P+++++
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 172/418 (41%), Gaps = 55/418 (13%)
Query: 151 FGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEG-------YVTLY 203
F FF + +Q G+ + E Y ++ L + F L+E + +G +++L
Sbjct: 102 FAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLV 161
Query: 204 TMT----------KVLRRLTKAGKHEDAIAAFR-------------------RMKEF--- 231
M ++ T G DAI FR RM +
Sbjct: 162 EMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPT 221
Query: 232 -------------GVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNI 276
G ++ N+LM+ K ++ A V E +SL P SFN
Sbjct: 222 GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQP-TVVSFNT 280
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L+NG+C+V N D+ ++ M++ PDVF+Y++ I + C + + +EM + G
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
PN V +T ++ + G++ E Y+KM S G+ PD Y++L+ K G L A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
++ + M ++G+ D +TY T+I C ETAL + KEM++ + D +
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + + PD T+++++ K G +E+ S G P
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 162/368 (44%), Gaps = 6/368 (1%)
Query: 127 HGFQVSNSSVQQILKRFN--NDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFD 184
H F V +L R N +GF+ G+ + ++N++++ K N
Sbjct: 199 HRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEI-LDAGFPLNVYVFNILMNKFCKEGNIS 257
Query: 185 LVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM 244
++ +E+ K T+ + ++ K G ++ +M++ D + L+
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 245 DALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGF 302
+AL K N ++ AHG+ E + LIP N F L++G R D ++ + M G
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIP-NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL 376
Query: 303 VPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALE 362
PD+ YN+ + +C + D +++ M G P+ +TYT ++ + G + ALE
Sbjct: 377 QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE 436
Query: 363 VYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
+ ++M +GI D +S+L+ + K GR+ DA +M + GI D VTY M+ C
Sbjct: 437 IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Query: 423 AHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLG 482
+T +LLKEM+ P + TY+ + M + PD
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
Query: 483 TFSLLVHG 490
T++ L+ G
Sbjct: 557 TYNTLLEG 564
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 6/282 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ +I+ L K D L +EM K T ++ ++ G+ + ++++M
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNF 287
G+ D N L++ K + A ++ + + L P + ++ L++G+CR +
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP-DKITYTTLIDGFCRGGDV 431
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ A ++ ++M ++G D +++ + C + ++ L EM G P+ VTYT++
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
M A K G ++ ++M+S G VP Y+ L+ L K G++K+A + + M G+
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
V D +TYNT++ H R + + + E DL +Y
Sbjct: 552 VPDDITYNTLLE---GHHRHANSSKRYIQKPEIGIVADLASY 590
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 174/420 (41%), Gaps = 56/420 (13%)
Query: 113 HHSSPELVAQALDGHGF-----------QVSNSSVQQ----ILKRFNNDWVP-----AFG 152
H +S LV LD GF +VS V++ IL+ + D A+
Sbjct: 75 HSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYR 134
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
FF W+ Q + H+ Y+L++ I + + +W LV+EM + T T ++
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSC 194
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG 272
+AG + A+ F + K F N H
Sbjct: 195 GEAGLAKQAVVQFMKSKTF-------------------NYRPFKH--------------- 220
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
S+N ++N V+ + V + M E GF PDV +YN + + + D++ +EM
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
+ +G P++ TY I++ LGK + AL MK GI P Y++LI L +AG L
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 393 KDACDVFED-MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+AC F D M K G DVV Y MI+ + A + +EM + P++ TY+
Sbjct: 341 -EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
+ M +P+ +S LV LRK+GKL A E++ +G
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 10/358 (2%)
Query: 158 KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
K +T E P +N ++ LG++ + + +LV +M + + + T+ ++ L K+ +
Sbjct: 287 KNKTPLEAPP--FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRR 344
Query: 218 HEDAIAAFRRMKEFGVD------MDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPL 269
++A+ F +M+ D D+ N L+D L K ++ A +L+ K
Sbjct: 345 VDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAP 404
Query: 270 NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
N+ ++N L++G+CR + A++V+ MKE P+V + N+ + C
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
+M + G N VTY ++ A + +A+ YEKM G PD Y +LI L +
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
R DA V E + + G D++ YN +I C + E +L +ME+ KPD TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ E M ++ L P + T+ ++ G+LD A F+++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 2/229 (0%)
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNIL 277
E A+ + +M E G D L+ L + A V+ + K L+ ++N+L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+ +C N ++ +++ DM++ G PD +YN+ I + KDF V++++E+M E+G
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV-PDTPFYSSLIFILGKAGRLKDAC 396
P TY V+ A G+L +AL++++ M H V P+T Y+ LI K G A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
+ E+M + + +V TYN + ++ ET L+L+ EM E+SC+P+
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 156/361 (43%), Gaps = 47/361 (13%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV--TLYTMTKVLRRLTKAG--KHEDA 221
+ ++ N+++D+L ++ D +++++EM + E T VL + K E
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKI 243
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNG 280
IA R GV ++ L + +L K A +L + K+ PL + FN L++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS- 302
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C RN D +R ++ ++ +M E P+
Sbjct: 303 -CLGRNMDISR---------------------------------MNDLVLKMDEVKIRPD 328
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMK------SHGIVPDTPFYSSLIFILGKAGRLKD 394
VT I++ L K+ ++ +ALEV+EKM+ + I D+ +++LI L K GRLK+
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 395 ACDVFEDMP-KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
A ++ M ++ + VTYN +I C + ETA ++ M+E KP++ T +
Sbjct: 389 AEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M K + ++ T+ L+H ++ A ++E+++ G +
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 514 P 514
P
Sbjct: 509 P 509
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEG----YVTLYTMTKVLRRLTKAGKHEDAIAAF 225
YN++I + N + V+E++ +M K EG +T T+ GKH+D +
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEK-EGKKPDSITYNTLISFF------GKHKDFESVE 601
Query: 226 R---RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNG 280
R +M+E G+D ++DA ++ A + + S + N+ +NIL+N
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ ++ NF QA + E+MK P+V +YN+ + + ++++EM E C PN
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 341 AVTYTIVMFALGKAGQL 357
+T I+M L + +L
Sbjct: 722 QITMEILMERLSGSDEL 738
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 118/295 (40%), Gaps = 62/295 (21%)
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKV-------MEDMKEHGFVPDVFSYNSFIESYCHD 319
IPL + N+L+ + R+ +Q+ V M++ + V DV N + D
Sbjct: 148 IPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLV-----D 202
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQ--ALEVYEKMKSHGIVPDTP 377
F+ +D++L++ E+ PPN +T IV+ + K L++ + + + SHG+ P++
Sbjct: 203 DAFKVLDEMLQK--ESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQG------------------------------- 406
+ + I L K R A D+ D+ K
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 407 ----IVRDVVTYNTMISTACAHSREETALRLLKEMEERS------CKPDLETYHPXXXXX 456
I DVVT +I+T C R + AL + ++M + K D ++
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 457 XXXXXXXXXXXXXEHM-FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
M + +P+ T++ L+ G ++GKL+ A +E++SR
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA----KEVVSR 431
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 170/383 (44%), Gaps = 6/383 (1%)
Query: 132 SNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVE 191
S S+Q+IL ++W F + E + LM+ G+ + E E
Sbjct: 279 SRKSLQRILDTNGDNWQAVISAFEKISKPSRTE-----FGLMVKFYGRRGDMHRARETFE 333
Query: 192 EMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGN 251
M T T ++ ++A++ R+MKE G++M ++++ K
Sbjct: 334 RMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAG 393
Query: 252 SVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
E A E K + LN+ + ++ C+ N ++A ++ +M+E G + Y+
Sbjct: 394 HAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYH 453
Query: 311 SFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
+ ++ Y D +K V + + E G P VTY ++ K G++S+ALEV MK
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETA 430
G+ + YS +I K +A VFEDM K+G+ DV+ YN +IS C + A
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 431 LRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHG 490
++ +KEM++ +P T+ P + M + P + TF+ L++G
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 491 LRKSGKLDHACSFFEELISRGLT 513
L + +++ A +E+ G++
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVS 656
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 136/306 (44%), Gaps = 2/306 (0%)
Query: 146 DWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTM 205
DW AF F + G + LYN +I N D + V+EM K T T
Sbjct: 534 DWANAFAVFE-DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK- 264
++ K+G ++ F M+ G N L++ LV+ +E A +L E
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
+ + N ++ +M G+ V + +A + ++ G D+F+Y + +++ C +
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
V +EMS P N+ Y I++ + G + +A ++ ++MK G+ PD Y+S I
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
KAG + A E+M G+ ++ TY T+I S E AL +EM+ KP
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Query: 445 DLETYH 450
D YH
Sbjct: 833 DKAVYH 838
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 10/288 (3%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N +I+ L + + + E+++EM +T TK+++ G A F R++
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
G+D+D L+ A K ++ A V E + IP NS +NIL++GW R +
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A +++ MK+ G PD+ +Y SFI + D + Q +EEM G PN TYT ++
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA------CDVFEDM 402
+A +AL YE+MK+ GI PD Y L+ L + +A + ++M
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 866
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+ G++ D+ T C + E + L E +++ PD ++H
Sbjct: 867 VEAGLIVDMGTAVHWSKCLC---KIEASGGELTETLQKTFPPDWSSHH 911
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 166/376 (44%), Gaps = 5/376 (1%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
L NL + SK ++ + EE KH L T + ++ K +A A F M
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKH----NLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL-NSGSFNILMNGWCRVRNF 287
+ G+ D N ++ A +++ A + E + L + +F +++G+ + +
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
++ +V + M+ G VP V ++N I + K ++L+EM+ G N TYT +
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
M G +A E + ++++ G+ D Y +L+ K+GR++ A V ++M + I
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
R+ YN +I A L+++M++ KPD+ TY
Sbjct: 726 PRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 785
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLE 527
E M + P++ T++ L+ G ++ + A S +EE+ + G+ P L+ L
Sbjct: 786 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 845
Query: 528 AKSMLKEKEHIEKLMT 543
+++ + E +MT
Sbjct: 846 SRASIAEAYIYSGVMT 861
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 151/336 (44%), Gaps = 2/336 (0%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
T+ T ++ TK GK A+ R MKE GV + +M+++ VK +A V
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 261 LEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
+ K + + +N +++ +C + N D+A + +++M++ P ++ I Y
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
D R+ +V + M GC P T+ ++ L + Q+ +A+E+ ++M G+ + Y
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+ ++ G A + F + +G+ D+ TY ++ C R ++AL + KEM
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
R+ + Y+ + M K + PD+ T++ + K+G ++
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 500 ACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEK 535
A EE+ + G+ P L+K A++ L EK
Sbjct: 783 ATQTIEEMEALGVKPNIKTYTTLIKGW-ARASLPEK 817
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 197/457 (43%), Gaps = 41/457 (8%)
Query: 135 SVQQILKRFNNDWVP--AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEE 192
S + +LK ++ P AF F A GY HS +Y+ ++ L +++ + V +VE
Sbjct: 9 SPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVEL 68
Query: 193 MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKE-FGVDMDTAALNMLMDALVKGN 251
+ E V++ K + A+ F+RM+E FG + + N L++A V+
Sbjct: 69 IRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 252 SVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
+ F++ + N ++N+L+ C+ + F++AR ++ M + GF PDVFSY+
Sbjct: 129 QWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYS 188
Query: 311 SFIESYCHDKDFRKVDQVLEEMSENGCP-------------------------------- 338
+ I ++ +EMSE G
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248
Query: 339 ----PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
PN T+ I++ L K G++ L+++E+MK + D YSSLI L AG +
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
A VF ++ ++ DVVTYNTM+ C + + +L L + ME ++ ++ +Y+
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIK 367
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + D T+ + +HGL +G ++ A +E+ S G
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 515 RHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIRFTS 551
A ++ L K L+E ++ K M+ + S
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 39/405 (9%)
Query: 147 WVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMT 206
WV F + +T G + + YN++I + K K F+ ++ M K +++ +
Sbjct: 130 WVKVESLFAYFET-AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYS 188
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV---LLEF 263
V+ L KAGK +DA+ F M E GV D N+L+D +K + A + LLE
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
S+ P N + NI+++G + D K+ E MK++ D+++Y+S I C +
Sbjct: 249 SSVYP-NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK--------------- 368
K + V E+ E + VTY ++ + G++ ++LE++ M+
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIK 367
Query: 369 -------------------SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
+ G D Y I L G + A V +++ G
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
DV Y ++I C R E A L+KEM + + + +
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M KN P + ++++L+ GL K+GK A +F +E++ G P
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 164/349 (46%), Gaps = 8/349 (2%)
Query: 170 YNLMIDIL---GKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFR 226
YN M+ GK K +W ++E H+ V + + +++ L + GK ++A +R
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIME----HKNSVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIP-LNSGSFNILMNGWCRVR 285
M G D + + L V A GV+ E +S L+ ++ +++ C+ +
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
++A ++++M +HG + N+ I D + L EM +NGC P V+Y
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
I++ L KAG+ +A ++M +G PD YS L+ L + ++ A +++ +
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G+ DV+ +N +I C+ + + A+ ++ ME R+C +L TY+
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+M+K L PD+ +++ ++ GL + +A FF++ + G+ P
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 7/293 (2%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
GY Y + I L + + +++E+ G++ +Y ++ L K + E+A
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNG 280
+ M + GV++++ N L+ L++ + + A L E K+ S+NIL+ G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE---EMSENGC 337
C+ F +A +++M E+G+ PD+ +Y+ + C D RK+D LE + ++G
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD---RKIDLALELWHQFLQSGL 565
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
+ + + I++ L G+L A+ V M+ + Y++L+ K G A
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
++ M K G+ D+++YNT++ C A+ + P + T++
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +ID L K K + LV+EM+KH + + ++ L + + +A R M
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG------SFNILMNGWCR 283
+ G + N+L+ L K A + E L +G +++IL+ G CR
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-----LENGWKPDLKTYSILLCGLCR 546
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
R D A ++ + G DV +N I C V+ M C N VT
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
Y +M K G ++A ++ M G+ PD Y++++ L + A + F+D
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 404 KQGIVRDVVTYNTMI 418
GI V T+N ++
Sbjct: 667 NHGIFPTVYTWNILV 681
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 7/257 (2%)
Query: 100 HDYVEAISTLLKEHH--SSPELVAQALDGHGFQVSNSSVQQILKRFNND-WVPAFGFFTW 156
+ Y I L K+ + LV + + HG ++++ ++ D + FF
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKE-MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 157 AKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAG 216
+ G + YN++I L K+ F V+EM ++ L T + +L L +
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSF 274
K + A+ + + + G++ D N+L+ L ++ A V+ +E ++ N ++
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA-NLVTY 607
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
N LM G+ +V + ++A + M + G PD+ SYN+ ++ C + + ++
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 667
Query: 335 NGCPPNAVTYTIVMFAL 351
+G P T+ I++ A+
Sbjct: 668 HGIFPTVYTWNILVRAV 684
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 161/342 (47%), Gaps = 7/342 (2%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+YN +ID L K K+ D ++L +M ++T ++ L G+ DA M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGV---LLEFKSLIPLNSGSFNILMNGWCRVR 285
E ++ D N L+DA VK + A + +++ K P + ++N L+ G+C+ +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGFCKYK 370
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
++ +V +M + G V + +Y + I + +D V ++M +G P+ +TY
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
I++ L G + AL V+E M+ + D Y+++I L KAG+++D D+F + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G+ +VVTY TM+S C +E A L EM+E P+ TY+
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ M + D TF L+ + L G+LD SF + L
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNMLH-DGRLDK--SFLDML 589
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 11/366 (3%)
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
W ++ G NL +L K D L +M K + ++ +K+L +
Sbjct: 28 LCWERSFAGASSDDCRENLSRKVLQDLK-LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIA 86
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG- 272
K K + I+ +M+ G+ + ++ ++ + + + A +L ++ L G
Sbjct: 87 KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL---GKMMKLGYGP 143
Query: 273 ---SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES-YCHDKDFRKVDQV 328
+ N L+NG+C +A +++ M E G+ PD ++ + + + H+K V +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-AL 202
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
+E M GC P+ VTY V+ L K G+ AL + KM+ I D Y+++I L K
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
+ DA D+F M +GI DV TYN +IS C + R A RLL +M E++ PDL
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKND-LSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
++ + M K+ PD+ ++ L+ G K +++ F E+
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 508 ISRGLT 513
RGL
Sbjct: 383 SQRGLV 388
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 2/357 (0%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ GY S N +++ LV++M + T T ++ L + K
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILM 278
+A+A RM G D +++ L K + A +L + K I + +N ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+G C+ ++ D A + M+ G PDVF+YN I C+ + ++L +M E
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKM-KSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
P+ V + ++ A K G+L +A ++Y++M KS PD Y++LI K R+++ +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
VF +M ++G+V + VTY T+I + A + K+M PD+ TY+
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
E+M K D+ D+ T++ ++ L K+GK++ F L +G+ P
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%)
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
+L A+ ++ M P +S L+ + K + + E M GI ++ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
I+ C S+ AL +L +M + P + T + + M +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 476 DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
PD TF+ LVHGL + K A + E ++ +G P
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 213
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 163/347 (46%), Gaps = 3/347 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+N++I++L +F+ L+++M K GY T+ T VL K G+ + AI M
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEK-SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNF 287
K GVD D NML+ L + N + + +L + K +I N ++N L+NG+
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
A +++ +M G P+ ++N+ I+ + + +F++ ++ M G P+ V+Y ++
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ L K + A Y +MK +G+ Y+ +I L K G L +A + +M K GI
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
D+VTY+ +I+ C R +TA ++ + P+ Y
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
E M + D TF++LV L K+GK+ A F + S G+ P
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 149/340 (43%), Gaps = 3/340 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN++I L +S + L+ +M K + T ++ + GK A M
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRVRNF 287
FG+ + N L+D + + + A + ++E K L P + S+ +L++G C+ F
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP-SEVSYGVLLDGLCKNAEF 424
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D AR MK +G +Y I+ C + + +L EMS++G P+ VTY+ +
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ K G+ A E+ ++ G+ P+ YS+LI+ + G LK+A ++E M +G
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
RD T+N ++++ C + A ++ M P+ ++
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ M K P T+ L+ GL K G L A F + L
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 167/384 (43%), Gaps = 19/384 (4%)
Query: 150 AFGFFTWAKTQTGYE--HSPELYNLMIDILGKSKNFDLVWELVEEMAKHEG--------Y 199
A F W Q G E H +L + IL +++ +D +++E++ G
Sbjct: 93 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 152
Query: 200 VTLYTMTK--------VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGN 251
+T Y + ++R + G +D++ FR M +G + N ++ ++VK
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 212
Query: 252 SVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
L E K I + +FNIL+N C +F+++ +M+ M++ G+ P + +YN
Sbjct: 213 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 272
Query: 311 SFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
+ + YC F+ ++L+ M G + TY +++ L ++ ++++ + M+
Sbjct: 273 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 332
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETA 430
I P+ Y++LI G++ A + +M G+ + VT+N +I + + A
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 431 LRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHG 490
L++ ME + P +Y M +N + T++ ++ G
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 491 LRKSGKLDHACSFFEELISRGLTP 514
L K+G LD A E+ G+ P
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDP 476
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 183/460 (39%), Gaps = 60/460 (13%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHS---SPELVA--QALDGHGFQVSNSSVQQILKRFN 144
L+ NE K V S LL E S SP V +DGH +S + ++ LK F
Sbjct: 344 LINGFSNEGK---VLIASQLLNEMLSFGLSPNHVTFNALIDGH---ISEGNFKEALKMF- 396
Query: 145 NDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYT 204
+ AK T E S Y +++D L K+ FDL M ++ V T
Sbjct: 397 --------YMMEAKGLTPSEVS---YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-- 262
T ++ L K G ++A+ M + G+D D + L++ K + A ++
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 263 ----------FKSLI------------------------PLNSGSFNILMNGWCRVRNFD 288
+ +LI + +FN+L+ C+
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A + M M G +P+ S++ I Y + + K V +EM++ G P TY ++
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L K G L +A + + + + DT Y++L+ + K+G L A +F +M ++ I+
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEER-SCKPDLETYHPXXXXXXXXXXXXXXXX 467
D TY ++IS C + A+ KE E R + P+ Y
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
E M +PD+ T + ++ G + GK++ E+
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 162/411 (39%), Gaps = 39/411 (9%)
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
F T G + ++ +I+ G S + + +EM K + T +T +L+ L
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNS 271
K G +A + + +DT N L+ A+ K ++ A + E +S++P +S
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP-DS 688
Query: 272 GSFNILMNGWCR---------------VRNFDQARKVM---------------------E 295
++ L++G CR R KVM E
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 748
Query: 296 DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
M G PD+ + N+ I+ Y K + +L EM PN TY I++ K
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
+S + +Y + +GI+PD SL+ + ++ L+ + + +G+ D T+N
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
+IS CA+ A L+K M D +T M K
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 476 DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+SP+ + L++GL + G + A EE+I+ + P + A +V+ L
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 3/220 (1%)
Query: 232 GVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQA 290
GV++D NML+ + A ++ SL I L+ + + +++ R F ++
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 291 RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM-SENGCPPNAVTYTIVMF 349
R V+ +M + G P+ Y I C D + V EEM + CPPN +V
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR- 977
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
AL K G+ +A + M +VP +++L+ + K G + +A ++ M G+
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
D+V+YN +I+ CA A L +EM+ + TY
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 153/375 (40%), Gaps = 11/375 (2%)
Query: 165 HSPELY--NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
H+P++ N MID + + +L+ EM G L T +L +K +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGW 281
+R + G+ D + L+ + + N +E +L F + ++ +FN+L++
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
C + A +++ M G D + ++ + + F++ VL EMS+ G P +
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
Y ++ L + G + A V E+M +H I P S+++ L K G+ +A +
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX 461
M K +V + ++ T++ C + AL L M K DL +Y+
Sbjct: 995 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1054
Query: 462 XXXXXXXXEHMFKNDLSPDLGTFSLLVHG-LRKSGKLDHACSFFEELISRGLTP------ 514
E M + + T+ L+ G L + A ++L++RG
Sbjct: 1055 MALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1114
Query: 515 -RHGALKQLVKDLEA 528
H LK ++ L+A
Sbjct: 1115 DSHRNLKMAMEKLKA 1129
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 159/365 (43%), Gaps = 28/365 (7%)
Query: 154 FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEG-------YVTLYTMT 206
F WA T G+ HS Y + L + FD V++L++EM G +VT
Sbjct: 63 FRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVT----- 117
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL 266
++R +A + I+ + +FG+ N ++D LVK ++ A EF +
Sbjct: 118 -IIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAR----EFFTR 171
Query: 267 IPLNSG------SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
+ SG ++ ILM G K+++ MK G P+ YN+ + + C +
Sbjct: 172 KMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNG 231
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ ++ EM E PN VT+ I++ A +L Q++ + EK S G VPD +
Sbjct: 232 KVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVT 287
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
++ +L GR+ +A +V E + +G DVV NT++ CA + A R EME +
Sbjct: 288 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 347
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
P++ETY+ M + + + TF+ L+ GL G+ D
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDG 407
Query: 501 CSFFE 505
E
Sbjct: 408 LKILE 412
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEG-YVTLYTMTKVLRRLTKAGK 217
++ G + S +++N ++D+L K ++ D+ E G + +YT +++ L+ +
Sbjct: 139 SKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNIL 277
D + MK GV + N L+ AL K V A ++ E K P N +FNIL
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE--P-NDVTFNIL 254
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
++ +C + Q+ ++E GFVPDV + +E C++ + +VLE + G
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
+ V ++ G++ A + +M+ G +P+ Y+ LI G L A D
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
F DM I + T+NT+I R + L++L+ M++
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 143/364 (39%), Gaps = 45/364 (12%)
Query: 188 ELVEEMAKHE-----GYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALN 241
+L++ M E G+V + T+TKV+ L G+ +A+ R++ G +D A N
Sbjct: 263 KLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACN 322
Query: 242 MLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKE 299
L+ + A +E K +P N ++N+L+ G+C V D A DMK
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYLP-NVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 300 HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN-----------GCP---------- 338
+ ++N+ I ++LE M ++ C
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRW 441
Query: 339 --------------PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
P AV + + +L + G + Y++M G VP LI
Sbjct: 442 EDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
+ G+++++ ++ DM +G + T+N +I C + ++ +++M ER C P
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
D E+Y+P M + + PD +S L+ L + + H S
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAI-HVNSSL 620
Query: 505 EELI 508
+++I
Sbjct: 621 QDII 624
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 159/347 (45%), Gaps = 14/347 (4%)
Query: 196 HEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGN-SVE 254
+ YVT VL L + + A ++ M+E G+ A+LN+L+ AL + + +V+
Sbjct: 121 QKAYVT------VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVD 174
Query: 255 HAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFI 313
+ LE K +S ++ L++G CR D+A+K+ +M E P V +Y S I
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
C K+ + + LEEM G PN TY+ +M L K G+ QA+E++E M + G
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
P+ Y++LI L K ++++A ++ + M QG+ D Y +IS CA S+ A
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXE------HMFKNDLSPDLGTFSLL 487
L EM P+ T++ M +S ++ T L
Sbjct: 355 LDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESL 414
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
V L K G+ A +E+++ G P G K L+ K+++ E
Sbjct: 415 VKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGE 461
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 8/304 (2%)
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMN---GWCRV-RNFDQAR 291
D ++ ++ LV N + A +++ K I S +IL++ G+ RV R FD R
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMK--IENCVVSEDILLSICRGYGRVHRPFDSLR 107
Query: 292 KVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
V MK+ P +Y + + + + + M E G PP + +++ AL
Sbjct: 108 -VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 352 GKA-GQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD 410
+ G + L+++ +M G PD+ Y +LI L + GR+ +A +F +M ++
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 411 VVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXE 470
VVTY ++I+ C + A+R L+EM+ + +P++ TY E
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 471 HMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKS 530
M P++ T++ L+ GL K K+ A + + +GL P G +++ A S
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 531 MLKE 534
+E
Sbjct: 347 KFRE 350
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 1/216 (0%)
Query: 300 HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQ 359
+G+V D S+ + F+ + ++ M C + + G+ +
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 360 ALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIS 419
+L V+ KMK P Y +++ IL + +L A +++M + G+ V + N +I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 420 TACAH-SREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLS 478
C + + L++ EM +R C PD TY M + D +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 479 PDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
P + T++ L++GL S +D A + EE+ S+G+ P
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 164/380 (43%), Gaps = 14/380 (3%)
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM-KEF 231
MI+ S +FD V +L+ + + + V R KA + A+ F RM EF
Sbjct: 83 MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142
Query: 232 GVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL---------IPLNSGSFNILMNGWC 282
+ N +++ ++ N + G LEF I N SFN+++ C
Sbjct: 143 RCKRSVKSFNSVLNVII--NEGLYHRG--LEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
++R D+A +V M E +PD ++Y + ++ C ++ + +L+EM GC P+ V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
Y +++ L K G L++ ++ + M G VP+ Y++LI L G+L A + E M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
+ + VTY T+I+ R A+RLL MEER + Y
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
M + P++ +S+LV GL + GK + A +I+ G P L
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 523 VKDLEAKSMLKEKEHIEKLM 542
+K + +E + K M
Sbjct: 439 MKGFFKTGLCEEAVQVWKEM 458
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 157/356 (44%), Gaps = 5/356 (1%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G SP +YN++ID L K + V +LV+ M T ++ L GK + A
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
++ RM + L++ LVK A +L + LN +++L++G
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ ++A + M E G P++ Y+ ++ C + + ++L M +GC PN
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
A TY+ +M K G +A++V+++M G + YS LI L GR+K+A V+
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM---EERSCKPDLETYHPXXXXXX 457
M GI D V Y+++I C + AL+L EM EE +PD+ TY+
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL-RKSGKLDHACSFFEELISRGL 512
M PD+ T + ++ L KS D SF EEL+ R L
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL 607
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 167/381 (43%), Gaps = 13/381 (3%)
Query: 181 KNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA-- 238
K DL +V+E ++ + VL + G + + + + ++M+ +
Sbjct: 130 KAVDLFHRMVDEFRCKR---SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPN 186
Query: 239 --ALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG-SFNILMNGWCRVRNFDQARKVME 295
+ N+++ AL K V+ A V L G ++ LM+G C+ D+A +++
Sbjct: 187 GLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 296 DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
+M+ G P YN I+ C D +V ++++ M GC PN VTY ++ L G
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
+L +A+ + E+M S +P+ Y +LI L K R DA + M ++G + Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
+IS + E A+ L ++M E+ CKP++ Y M +
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 476 DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEK 535
P+ T+S L+ G K+G + A ++E+ G + L+ L +KE
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 536 EHI-EKLMT----PPSIRFTS 551
+ K++T P ++ ++S
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSS 507
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 160/403 (39%), Gaps = 45/403 (11%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+NL+I L K + D E+ M + + YT ++ L K + ++A+ M+
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNF 287
G N+L+D L K + ++ + K +P N ++N L++G C
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP-NEVTYNTLIHGLCLKGKL 308
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV-----LEE----------- 331
D+A ++E M +P+ +Y + I + R D V +EE
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR--RATDAVRLLSSMEERGYHLNQHIYS 366
Query: 332 ---------------------MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
M+E GC PN V Y++++ L + G+ ++A E+ +M +
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETA 430
G +P+ YSSL+ K G ++A V+++M K G R+ Y+ +I C R + A
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 431 LRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND---LSPDLGTFSLL 487
+ + +M KPD Y M + PD+ T+++L
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKS 530
+ GL + A ++ RG P + L KS
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 8/368 (2%)
Query: 141 KRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV 200
+RF++ WV G +Y ++ K + +L++EM
Sbjct: 178 RRFDSVWVD-----YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKP 232
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
+Y T + L + K E+A F MK+ GV + + ++D K +V A+G+
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 261 LEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
E L+P N F L++G+C+ R AR + M + G P+++ YN I +C
Sbjct: 293 KEILVAELLP-NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
+ + +L EM P+ TYTI++ L Q+++A +++KMK+ I P +
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
Y+SLI K ++ A D+ +M G+ +++T++T+I C + A+ L EM
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
+ PD+ TY M + + P+ TF+ LV G K G+L
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Query: 499 HACSFFEE 506
A F++E
Sbjct: 532 VAIDFYQE 539
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 175/411 (42%), Gaps = 24/411 (5%)
Query: 97 ENKHDYVEAISTLLKEHHSSPELVAQA--LDGHGFQVSNSSVQQILKRFNNDWVPAFGFF 154
+NK + E + L+K+H P L + +DG+ +V+Q A+G +
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY---CKTGNVRQ-----------AYGLY 292
Query: 155 TWAKTQTGYEHSPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
K E P + + ++D K++ L M K LY ++
Sbjct: 293 ---KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLN 270
K+G +A+ M+ + D +L++ L + V A+ + + K+ + P +
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP-S 408
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
S ++N L++G+C+ N +QA + +M G P++ ++++ I+ YC+ +D + +
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
EM+ G P+ VTYT ++ A K + +AL +Y M GI P+ ++ L+ K G
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
RL A D +++ +Q + V + +I C + A R +M PD+ +Y
Sbjct: 529 RLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYV 588
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
M K + P+L LL + +G + AC
Sbjct: 589 SMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
++NG R R FD + M G VPDV Y + + K +++L+EM+ G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
PN YTI + L + ++ +A +++E MK HG++P+ YS++I K G ++ A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
+++++ ++ +VV + T++ C TA L M + P+L Y+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
M +LSPD+ T+++L++GL ++ A F+++ + + P
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 517 GALKQLV 523
L+
Sbjct: 410 ATYNSLI 416
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 3/243 (1%)
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
G F++L+ + + F++A V +MK PD + S + + F V +
Sbjct: 133 GVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQL 189
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M G P+ Y ++ K G S+ ++ ++M S GI P+ Y+ I L + +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+++A +FE M K G++ ++ TY+ MI C A L KE+ P++ +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
HM K + P+L ++ L+HG KSG + A E+ S
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 512 LTP 514
L+P
Sbjct: 370 LSP 372
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 179/416 (43%), Gaps = 42/416 (10%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G+ E N ++ +L + + W +M + E +YT ++ L K GK +
Sbjct: 183 EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLK 242
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS-------------- 265
A M+ FG+ N L+ +E A ++ E KS
Sbjct: 243 KAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 266 --------------------LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
L+P +S S+NIL+ G + + A ++M + G VP
Sbjct: 303 SWMCNEGRASEVLREMKEIGLVP-DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
++YN+ I + + ++ E+ E G ++VTY I++ + G +A +++
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
+M + GI P Y+SLI++L + + ++A ++FE + +G+ D+V NT++ CA
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 426 REETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFS 485
+ A LLKEM+ S PD TY+ M + + PD +++
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 486 LLVHGLRKSGKLDHACSFFEELISRGLTPR----HGALKQLVKDLE---AKSMLKE 534
L+ G K G HA +E++S G P + LK L K+ E A+ +L+E
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 1/277 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN++I + + ++ + +EM K T YT ++ L K E A R ++
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS-LIPLNSGSFNILMNGWCRVRNFD 288
E G+ +D+ N+L++ + + A + E + I ++ L+ CR
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A ++ E + G PD+ N+ ++ +C + + +L+EM P+ VTY +M
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L G+ +A E+ +MK GI PD Y++LI K G K A V ++M G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
++TYN ++ + E A LL+EM+ P+
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN++I+ + + + L +EM T +T T ++ L + K +A F ++
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
G+ D +N LMD +++ A +L E + I + ++N LM G C F+
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+AR++M +MK G PD SYN+ I Y D + V +EM G P +TY ++
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
L K + A E+ +MKS GIVP+ + S+I
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
F++L+ C++R D+A + MKE GF P + N + +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
N T+ I++ L K G+L +A M+ GI P Y++L+ GR++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
A + +M +G D+ TYN ++S C R A +L+EM+E PD +Y+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
+ M K + P T++ L+HGL K++ A E+ +G+
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 322 FRKVDQVLE---EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
R VD+ +E M E G P T ++ L + ++ A Y M I +
Sbjct: 168 LRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYT 227
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
++ +I +L K G+LK A M GI +VTYNT++ R E A ++ EM+
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
+ +PD++TY+P M + L PD ++++L+ G +G L+
Sbjct: 288 SKGFQPDMQTYNP---ILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 499 HACSFFEELISRGLTPRHGALKQLVKDL 526
A ++ +E++ +G+ P L+ L
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 157/346 (45%), Gaps = 9/346 (2%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
L T T +L + EDAIA F ++ G + L+ L K + HA +
Sbjct: 153 LVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA----V 208
Query: 262 EFKSLIPLNSG-----SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
E + + N ++N L+ G C + + A ++ DM + P+V ++ + I+++
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 317 CHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDT 376
+ ++ M + P+ TY ++ L G L +A +++ M+ +G P+
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
Y++LI K+ R++D +F +M ++G+V + +TY +I C R + A + +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
M R PD+ TY+ E+M K ++ ++ T+++++ G+ K GK
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
++ A F L S+G+ P ++ + ++ E + + K M
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 184 DLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNML 243
D W L+ +M K + T T ++ K GK +A + M + V D L
Sbjct: 241 DAAW-LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 244 MDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHG 301
++ L ++ A + L+E P N + L++G+C+ + + K+ +M + G
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYP-NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
V + +Y I+ YC +V +MS PP+ TY +++ L G++ +AL
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
++E M+ + + Y+ +I + K G+++DA D+F + +G+ +V+TY TMIS
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 422 CAHSREETALRLLKEMEERSCKPDLETY 449
C A L K+M+E P+ Y
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 5/309 (1%)
Query: 210 RRLTKAGKHE----DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
R++ + G H DA+ F RM L+ + K N + + + +
Sbjct: 52 RKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQI 111
Query: 266 L-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
L IP + NI+M+ C +A + M + GF PD+ ++ S + YCH
Sbjct: 112 LGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIED 171
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
+ +++ G PN VTYT ++ L K L+ A+E++ +M ++G P+ Y++L+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
L + GR DA + DM K+ I +V+T+ +I + A L M + S P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
D+ TY M +N P+ ++ L+HG KS +++ F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 505 EELISRGLT 513
E+ +G+
Sbjct: 352 YEMSQKGVV 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+ +ID K EL M + Y ++T ++ L G ++A F M+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G + L+ K VE + E + + N+ ++ +L+ G+C V D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A++V M PD+ +YN ++ C + K + E M + N VTYTI++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ K G++ A +++ + S G+ P+ Y+++I + G + +A +F+ M + G +
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 409 RDVVTY 414
+ Y
Sbjct: 501 PNESVY 506
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+Y +I KSK + ++ EM++ T T +++ G+ + A F +M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRN 286
D N+L+D L VE A ++ E+ K + +N ++ I++ G C++
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKAL-MIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
+ A + + G P+V +Y + I +C + D + ++M E+G PN Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 201/491 (40%), Gaps = 46/491 (9%)
Query: 106 ISTLLKEHH-SSPELVAQALDGHGFQVSNSSVQQILKRFNND--WVPAFGFFTWAKTQTG 162
IS L KE SS + L GF + S ++ F N + A F + + G
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME-EDG 238
Query: 163 YEHSPELYNLMIDILGKSKN-FDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
+ + YN+++++ GK ++ + LVE+M YT ++ + H++A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF------KSLIPLNS---- 271
F MK G D N L+D K + + A VL E S++ NS
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 272 --------------------------GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
++ L++G+ R + A + E+M+ G P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
+ ++N+FI+ Y + F ++ ++ +E++ G P+ VT+ ++ G+ G S+ V++
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
+MK G VP+ +++LI + G + A V+ M G+ D+ TYNT+++
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 426 REETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFS 485
E + ++L EME+ CKP+ TY E ++ + P
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 486 LLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI-----EK 540
LV K L A F EL RG +P L +V + M+ + + E+
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 541 LMTPPSIRFTS 551
TP + S
Sbjct: 659 GFTPSMATYNS 669
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 40/324 (12%)
Query: 166 SPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAI 222
SP++ +N ++ + G++ V + +EM K G+V T ++ ++ G E A+
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNILMNGW 281
+RRM + GV D + N ++ AL +G E + VL E + N ++ L++ +
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 282 CRVRNFD-----------------------------------QARKVMEDMKEHGFVPDV 306
+ +A + ++KE GF PD+
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
+ NS + Y + K + VL+ M E G P+ TY +M+ ++ ++ E+ +
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
+ + GI PD Y+++I+ + R++DA +F +M GIV DV+TYNT I + A S
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 427 EETALRLLKEMEERSCKPDLETYH 450
E A+ +++ M + C+P+ TY+
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYN 773
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 165/424 (38%), Gaps = 38/424 (8%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ S YN +I + D EL +MA+ ++T T +L +AGK E A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 222 IAAFRRMKE-----------------------------------FGVDMDTAALNMLMDA 246
++ F M+ G+ D N L+
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 247 LVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVP 304
+ GV E K +P +FN L++ + R +F+QA V M + G P
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
D+ +YN+ + + + + ++VL EM + C PN +TY ++ A ++ +
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 365 EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAH 424
E++ S I P +L+ + K L +A F ++ ++G D+ T N+M+S
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 425 SREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTF 484
A +L M+ER P + TY+ + + PD+ ++
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 485 SLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTP 544
+ +++ ++ ++ A F E+ + G+ P + A SM +E + + M
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 545 PSIR 548
R
Sbjct: 763 HGCR 766
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%)
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
+ N +++ + R + +A V++ MKE GF P + +YNS + + DF K +++L E+
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
G P+ ++Y V++A + ++ A ++ +M++ GIVPD Y++ I
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
++A V M K G + TYN+++ C +R++ A ++++
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 7/200 (3%)
Query: 321 DFRKVDQVLEEMSEN-GCPPNAVTYTIVMF--ALGKAGQLSQALEVYE---KMKSHGIVP 374
D ++D VL E+ E P + + ++ F LG + AL ++ K K + +
Sbjct: 112 DSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSML 171
Query: 375 DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
D + +I +LGK GR+ A ++F + + G DV +Y ++IS R A+ +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 435 KEMEERSCKPDLETYHPXXXXXXXXXXX-XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
K+MEE CKP L TY+ E M + ++PD T++ L+ ++
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 494 SGKLDHACSFFEELISRGLT 513
A FEE+ + G +
Sbjct: 292 GSLHQEAAQVFEEMKAAGFS 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
TL +M + R K A MKE G A N LM + + +
Sbjct: 630 TTLNSMVSIYGRRQMVAK---ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 260 LLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
L E K + P + S+N ++ +CR A ++ +M+ G VPDV +YN+FI SY
Sbjct: 687 LREILAKGIKP-DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS 369
D F + V+ M ++GC PN TY ++ K + +A E +++
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 18/347 (5%)
Query: 104 EAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGY 163
E + ++ HH SP+ + G V N+ ++ ++KR N A F K
Sbjct: 232 EVVLVEMQNHHVSPKTI-------GVTVYNAYIEGLMKRKGNT-EEAIDVFQRMKRDRC- 282
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
+ + E YNLMI++ GK+ + W+L EM H+ + T T ++ + G E A
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGW 281
F +++E G++ D N LM++ + A + L++ P + S+NI+++ +
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP-DRASYNIMVDAY 401
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
R A V E+MK G P + S+ + +Y +D K + +++EMSENG P+
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
++ G+ GQ ++ ++ +M++ D Y+ LI I GKAG L+ ++F +
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 521
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREE---TALRLLKEMEERSCKPD 445
+ ++ DVVT+ + I A+SR++ L + +EM + C PD
Sbjct: 522 LKEKNFRPDVVTWTSRIG---AYSRKKLYVKCLEVFEEMIDSGCAPD 565
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/523 (20%), Positives = 214/523 (40%), Gaps = 35/523 (6%)
Query: 30 YGNPLCTAVKPPLTPESPELPAWVKFSDNPTPPNADSDDDFVIPSL-AHWVDAHILDAKP 88
YG+ + P L+P + ++ + F T P+ +D +PS A W D + +
Sbjct: 95 YGSGFVDGIFPVLSPIAQKI---LSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQL 151
Query: 89 KLVTPTFNENKHDYVEAISTLLKEHHSSPELVAQAL--DGHGFQVSNSSVQQI-LKRFNN 145
+L N+ + +L++ P+++ L D +G + + + ++ +
Sbjct: 152 RL-----NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLES 206
Query: 146 DWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY-----V 200
+VP + + Y L+I + + ++ EM H V
Sbjct: 207 RYVP----------------TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGV 250
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
T+Y + + + G E+AI F+RMK T N++++ K + + +
Sbjct: 251 TVYN-AYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 309
Query: 261 LEFKS-LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
E +S N ++ L+N + R ++A ++ E ++E G PDV+ YN+ +ESY
Sbjct: 310 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA 369
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
++ M GC P+ +Y I++ A G+AG S A V+E+MK GI P +
Sbjct: 370 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
L+ KA + + ++M + G+ D N+M++ + ++L EME
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 489
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
C D+ TY+ + + + PD+ T++ + +
Sbjct: 490 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 549
Query: 500 ACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
FEE+I G P G K L+ ++ +++ + + M
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 172/404 (42%), Gaps = 94/404 (23%)
Query: 136 VQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLM---------------------- 173
V ++L D AF FF W+ T+ G++HS E Y ++
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 174 -------IDILGKSKN--------FDLVWELVEEMAKHEGYVTLYTMTK----------- 207
D+L ++N FD ++ ++ ++ E + ++ K
Sbjct: 171 SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230
Query: 208 --VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEF 263
+L R K GK +D F+ M G N+++D + K VE A G+ ++F
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
+ L+P ++ ++N +++G+ +V D E+MK+ PDV +YN+ I +C F
Sbjct: 291 RGLVP-DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK---FG 346
Query: 324 KVDQVLE---EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
K+ LE EM NG PN V+Y+ ++ A K G + QA++ Y M+ G+VP+ Y+
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE------------- 427
SLI K G L DA + +M + G+ +VVTY +I C R
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 428 ----------------------ETALRLLKEMEERSCKPDLETY 449
+ AL LL E++ R KPDL Y
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 13/392 (3%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
YN+MID + K + + L EEM K G V T ++ K G+ +D + F M
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMNGWCRVRN 286
K+ + D N L++ K + E K L P N S++ L++ +C+
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP-NVVSYSTLVDAFCKEGM 382
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
QA K DM+ G VP+ ++Y S I++ C + ++ EM + G N VTYT
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ L A ++ +A E++ KM + G++P+ Y++LI KA + A ++ ++ +G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
I D++ Y T I C+ + E A ++ EM+E K + Y
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR-GLTPRHGALKQLVKD 525
+ M + D+ + TF +L+ GL K+ + A +F + + GL ++
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 526 L------EAKSMLKEKEHIEKLMTPPSIRFTS 551
L EA + L E + ++K + P +TS
Sbjct: 623 LCKDNQVEAATTLFE-QMVQKGLVPDRTAYTS 653
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 4/315 (1%)
Query: 203 YTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL-- 260
YT T ++ K G DA M + GV+ + L+D L ++ A +
Sbjct: 403 YTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK 462
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
++ +IP N S+N L++G+ + +N D+A +++ ++K G PD+ Y +FI C +
Sbjct: 463 MDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
V+ EM E G N++ YT +M A K+G ++ L + ++MK I +
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQ-GIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
LI L K + A D F + G+ + + MI C ++ E A L ++M +
Sbjct: 582 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
+ PD Y + M + + DL ++ LV GL +L
Sbjct: 642 KGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQK 701
Query: 500 ACSFFEELISRGLTP 514
A SF EE+I G+ P
Sbjct: 702 ARSFLEEMIGEGIHP 716
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 4/241 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I K+KN D EL+ E+ L + L K E A MK
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 230 EFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNF 287
E G+ ++ LMDA K GN E H +L E K L I + +F +L++G C+ +
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLH-LLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 288 DQARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
+A + + G + + + I+ C D + E+M + G P+ YT
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
+M K G + +AL + +KM G+ D Y+SL++ L +L+ A E+M +G
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Query: 407 I 407
I
Sbjct: 714 I 714
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 2/288 (0%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Q G E + Y +ID L ++ EL +M L + ++ KA +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
A+ +K G+ D + L +E A V+ E K I NS + LM
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN-GC 337
+ + + N + ++++MKE V ++ I+ C +K K +S + G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
NA +T ++ L K Q+ A ++E+M G+VPD Y+SL+ K G + +A
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
+ + M + G+ D++ Y +++ ++ + A L+EM PD
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G + + +Y ++D KS N L++EM + + VT+ T ++ L K
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 220 DAIAAFRRM-KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNI 276
A+ F R+ +FG+ + A ++D L K N VE A + + K L+P + ++
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP-DRTAYTS 653
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
LM+G + N +A + + M E G D+ +Y S + H +K LEEM G
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
P+ V V+ + G + +A+E+ + H ++
Sbjct: 714 IHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 18/347 (5%)
Query: 104 EAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGY 163
E + ++ HH SP+ + G V N+ ++ ++KR N A F K
Sbjct: 210 EVVLVEMQNHHVSPKTI-------GVTVYNAYIEGLMKRKGNT-EEAIDVFQRMKRDRC- 260
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
+ + E YNLMI++ GK+ + W+L EM H+ + T T ++ + G E A
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGW 281
F +++E G++ D N LM++ + A + L++ P + S+NI+++ +
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP-DRASYNIMVDAY 379
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
R A V E+MK G P + S+ + +Y +D K + +++EMSENG P+
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
++ G+ GQ ++ ++ +M++ D Y+ LI I GKAG L+ ++F +
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 499
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREE---TALRLLKEMEERSCKPD 445
+ ++ DVVT+ + I A+SR++ L + +EM + C PD
Sbjct: 500 LKEKNFRPDVVTWTSRIG---AYSRKKLYVKCLEVFEEMIDSGCAPD 543
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/546 (20%), Positives = 222/546 (40%), Gaps = 36/546 (6%)
Query: 8 LHLFTHRLSPRIAAGNGSHR-FLYGNPLCTAVKPPLTPESPELPAWVKFSDNPTPPNADS 66
L F + R G+ R + YG+ + P L+P + ++ + F T P+ +
Sbjct: 50 LKRFNRKKLSRKRCGSLRGRGWKYGSGFVDGIFPVLSPIAQKI---LSFIQKETDPDKVA 106
Query: 67 DDDFVIPSL-AHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKEHHSSPELVAQAL- 124
D +PS A W D + + +L N+ + +L++ P+++ L
Sbjct: 107 DVLGALPSTHASWDDLINVSVQLRL-----NKKWDSIILVCEWILRKSSFQPDVICFNLL 161
Query: 125 -DGHGFQVSNSSVQQI-LKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKN 182
D +G + + + ++ + +VP + + Y L+I +
Sbjct: 162 IDAYGQKFQYKEAESLYVQLLESRYVP----------------TEDTYALLIKAYCMAGL 205
Query: 183 FDLVWELVEEMAKHEGY-----VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDT 237
+ ++ EM H VT+Y + + + G E+AI F+RMK T
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYN-AYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 238 AALNMLMDALVKGNSVEHAHGVLLEFKS-LIPLNSGSFNILMNGWCRVRNFDQARKVMED 296
N++++ K + + + E +S N ++ L+N + R ++A ++ E
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
++E G PDV+ YN+ +ESY ++ M GC P+ +Y I++ A G+AG
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
S A V+E+MK GI P + L+ KA + + ++M + G+ D N+
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 444
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
M++ + ++L EME C D+ TY+ + + +
Sbjct: 445 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 504
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKE 536
PD+ T++ + + FEE+I G P G K L+ ++ +++
Sbjct: 505 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVT 564
Query: 537 HIEKLM 542
+ + M
Sbjct: 565 SVLRTM 570
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 179/394 (45%), Gaps = 4/394 (1%)
Query: 124 LDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKT-QTGYEHSPELYNLMIDILGKSKN 182
+ G +++ + ++ F + A G+ + K +G +N ++ +L K +
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 183 FDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNM 242
+L++++ K L+T ++ L + G+ + A+ + E G D N
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 243 LMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH 300
L+ L K + + A L + + L P +S ++N L+ G+C+ A +++ D +
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEP-DSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 301 GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
GFVPD F+Y S I+ CH+ + + + E G PN + Y ++ L G + +A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
++ +M G++P+ ++ L+ L K G + DA + + M +G D+ T+N +I
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 421 ACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPD 480
+ E AL +L M + PD+ TY+ + M + +P+
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 481 LGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
L TF++L+ L + KLD A EE+ ++ + P
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 11/395 (2%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHED 220
G E YN +I K L +V + A G+V +T ++ L G+
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGD-AVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILM 278
A+A F G+ + N L+ L + A + E K LIP +FNIL+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP-EVQTFNILV 433
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
NG C++ A +++ M G+ PD+F++N I Y ++L+ M +NG
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+ TY ++ L K + +E Y+ M G P+ ++ L+ L + +L +A +
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER-SCKPDLETYHPXXXXXX 457
E+M + + D VT+ T+I C + + A L ++MEE TY+
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHG 517
+ M L PD T+ L+V G K+G ++ F E++ G P
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 518 ALKQLVKDLEAKSMLKEKEHI-----EKLMTPPSI 547
L +++ L + + E I +K + P ++
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 179/405 (44%), Gaps = 4/405 (0%)
Query: 146 DWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTM 205
D + A F + + G++H+ Y +I+ LG F+ + E++ +M ++ G L +
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 206 -TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK 264
++ + GK ++A+ F RM + + + N +M LV + AH V + +
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 265 SL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
I + SF I M +C+ A +++ +M G +V +Y + + + ++++F+
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF-YEENFK 197
Query: 324 KVD-QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
++ +M +G T+ ++ L K G + + ++ +K+ G++P+ Y+
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
I L + G L A + + +QG DV+TYN +I C +S+ + A L +M
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
+PD TY+ N PD T+ L+ GL G+ + A +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 503 FFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSI 547
F E + +G+ P L+K L + M+ E + M+ +
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 160/358 (44%), Gaps = 9/358 (2%)
Query: 163 YEHSPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHED 220
Y+ P + YN ++ +L S FD ++ M +Y+ T ++ K +
Sbjct: 105 YDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHA 164
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL---IPLNSGSFNIL 277
A+ M G +M+ A ++ + N A G L K L + L +FN L
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF--KAEGYELFGKMLASGVSLCLSTFNKL 222
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+ C+ + + K+++ + + G +P++F+YN FI+ C + +++ + E G
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVY-EKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
P+ +TY +++ L K + +A EVY KM + G+ PD+ Y++LI K G ++ A
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
+ D G V D TY ++I C AL L E + KP++ Y+
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + L P++ TF++LV+GL K G + A + +IS+G P
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 155/353 (43%), Gaps = 9/353 (2%)
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
V LY +++ L+ G +A M E G+ + N+L++ L K V A G+
Sbjct: 391 VILYN--TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 260 L--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
+ + K P + +FNIL++G+ + A ++++ M ++G PDV++YNS + C
Sbjct: 449 VKVMISKGYFP-DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTP 377
F V + + M E GC PN T+ I++ +L + +L +AL + E+MK+ + PD
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV-TYNTMISTACAHSREETALRLLKE 436
+ +LI K G L A +F M + V TYN +I A +L +E
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
M +R PD TY M +N P L T +++ L +
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIRF 549
+ A ++ +GL P + D++ K + K +E L+ I +
Sbjct: 688 VYEAAGIIHRMVQKGLVPEA---VNTICDVDKKEVAAPKLVLEDLLKKSCITY 737
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 144/332 (43%), Gaps = 8/332 (2%)
Query: 225 FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWC 282
F +M GV + + N L+ L K V+ +L + + ++P N ++N+ + G C
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP-NLFTYNLFIQGLC 262
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ D A +++ + E G PDV +YN+ I C + F++ + L +M G P++
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
TY ++ K G + A + +G VPD Y SLI L G A +F +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
+GI +V+ YNT+I A +L EM E+ P+++T++
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
+ M PD+ TF++L+HG K+++A + ++ G+ P L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 523 VKDLEAKSMLKE-----KEHIEKLMTPPSIRF 549
+ L S ++ K +EK P F
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 135/285 (47%), Gaps = 14/285 (4%)
Query: 165 HSPELYNLMIDILGKSKNFDL--VWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
+ P+++ I I G S + E+++ M + +YT +L L K K ED +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNG 280
++ M E G + N+L+++L + ++ A G+L E K S+ P ++ +F L++G
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP-DAVTFGTLIDG 575
Query: 281 WCRVRNFDQARKVMEDMKE-HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
+C+ + D A + M+E + +YN I ++ + +++ +EM + P
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
+ TY +++ K G ++ + +M +G +P +I L R+ +A +
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETAL--RLLKEMEERSC 442
M ++G+V + V +T C ++E A +L+++ ++SC
Sbjct: 696 HRMVQKGLVPEAV------NTICDVDKKEVAAPKLVLEDLLKKSC 734
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 241 NMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKE 299
N L+ +L + VE + E + L+ + +FN L+NG+C++ +A++ + + +
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 300 HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQ 359
G PD F+Y SFI +C K+ +V +EM++NGC N V+YT +++ L +A ++ +
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 360 ALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIS 419
AL + KMK P+ Y+ LI L +G+ +A ++F+ M + GI D Y +I
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 420 TACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSP 479
+ C+ + A LL+ M E P++ TY+ + M + +L P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSK-MLEQNLVP 362
Query: 480 DLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
DL T++ L+ G SG LD A + GL P
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 135/322 (41%), Gaps = 40/322 (12%)
Query: 167 PELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMT-----KVLRRLTKAGKHEDA 221
P++ LMI ++ V + M K + + Y +T +L L + G E+
Sbjct: 80 PKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEM 139
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLEFKSLIPLNSGSFNILMNG 280
+ M E V D N L++ K G VE V ++ + ++ + G
Sbjct: 140 KRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITG 199
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
CR + D A KV ++M ++G + SY I K + +L +M ++ C PN
Sbjct: 200 HCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN 259
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TYT+++ AL +GQ S+A+ ++++M GI PD Y+ LI L +A + E
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 401 ----------------------------------DMPKQGIVRDVVTYNTMISTACAHSR 426
M +Q +V D++TYNT+I+ C+
Sbjct: 320 HMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 427 EETALRLLKEMEERSCKPDLET 448
++A RLL MEE P+ T
Sbjct: 380 LDSAYRLLSLMEESGLVPNQRT 401
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 10/378 (2%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+Y+ +ID L K + L EM + ++T ++ G+ DA R M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRN 286
E ++ D N L+ A VK + A + E + + P ++ ++N ++ G+C+
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNR 416
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
FD A+ + + M PDV ++N+ I+ YC K + Q+L E+S G N TY
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ + L+ A +++++M SHG+ PDT + L++ + +L++A ++FE +
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
I D V YN +I C S+ + A L + +PD++TY+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
M N PD T++ L+ G K+G++D + E+ S G + +K
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAE--- 649
Query: 527 EAKSMLKEKEHIEKLMTP 544
E + ++E IE + P
Sbjct: 650 EIICRVSDEEIIENYLRP 667
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 22/348 (6%)
Query: 181 KNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAAL 240
K+ D + + M + + T KV+ + + + AI+ +R+M+ + ++ +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 241 NMLMDALVKGNSVEHAHGVLLEFKSLIPL----NSGSFNILMNGWC---RVR-------- 285
N+L+ + + + L F L L + +FN L++G C R+
Sbjct: 145 NILIKCFCDCHKLSFS---LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 286 ----NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
F +A + + M E G P V ++N+ I C + + ++ +M G +
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
VTY ++ + K G AL + KM+ I PD YS++I L K G DA +F +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX 461
M ++GI +V TYN MI C+ R A RLL++M ER PD+ T++
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 462 XXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ M + PD T++ +++G K + D A F+ + S
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 5/306 (1%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
+ T ++ L G+ +A A +M G+ +D +++ + K + A +L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 261 LEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
+ + I + ++ +++ C+ + A+ + +M E G P+VF+YN I+ +C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+ ++L +M E P+ +T+ ++ A K G+L +A ++ ++M I PDT Y
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+S+I+ K R DA +F+ M DVVT+NT+I C R + ++LL+E+
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
R + TY+ + M + + PD T ++L++G ++ KL+
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 500 ACSFFE 505
A FE
Sbjct: 521 ALELFE 526
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 190/446 (42%), Gaps = 45/446 (10%)
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
NND V A F + + G + ++++I+ K+ + E ++M +++
Sbjct: 352 NNDLVSALVLFDKMEKE-GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--L 261
+ +++ K KHE+A+ F E G+ + N ++ L K + A +L +
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
E + + P N S+N +M G CR +N D AR V ++ E G P+ ++Y+ I+ + D
Sbjct: 470 ESRGIGP-NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV------------------ 363
+ +V+ M+ + N V Y ++ L K GQ S+A E+
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 364 ------------------YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
YE+M +GI P+ Y+SL+ L K R+ A ++ ++M +
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G+ D+ Y +I C S E+A L E+ E P Y+
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKD 525
+ M K+ L DLGT++ L+ GL K G L A + E+ + GL P +V
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 526 LEAKS----MLKEKEHIEKLMTPPSI 547
L K ++K E ++K P++
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNV 794
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 158/389 (40%), Gaps = 38/389 (9%)
Query: 176 ILGKSKNFDLVWELV--EEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGV 233
I G KN DLV LV ++M K T + ++ K G+ E A+ +++M+ G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 234 DMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKV 293
++ ++ +KG E A + E N N +++ C+ D+A ++
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI------- 346
+ M+ G P+V SYN+ + +C K+ V + E G PN TY+I
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 347 ----------------------------VMFALGKAGQLSQALEVYEKM-KSHGIVPDTP 377
++ L K GQ S+A E+ M + +
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
Y+S+I K G + A +E+M GI +V+TY ++++ C ++R + AL + EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 438 EERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
+ + K D+ Y + + L+P ++ L+ G R G +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 498 DHACSFFEELISRGLTPRHGALKQLVKDL 526
A +++++ GL G L+ L
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 140/323 (43%), Gaps = 2/323 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM- 228
Y+++ID ++ + E+V M V ++ L K G+ A M
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNF 287
+E + + + N ++D K ++ A E + I N ++ LMNG C+
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
DQA ++ ++MK G D+ +Y + I+ +C + + E+ E G P+ Y +
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ G + AL++Y+KM G+ D Y++LI L K G L A +++ +M G+
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
V D + Y +++ + +++ +EM++ + P++ Y+
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Query: 468 XXEHMFKNDLSPDLGTFSLLVHG 490
+ M + PD TF +LV G
Sbjct: 816 LHDEMLDKGILPDGATFDILVSG 838
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 3/289 (1%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T ++R + K +A+ R E G + D+ ++ + A K + A+ +L E
Sbjct: 235 TTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREM 294
Query: 264 K--SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
K L + ++ ++ + N D A ++ ++M G +V + S I +C + D
Sbjct: 295 KEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNND 354
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ ++M + G PN+VT+++++ K G++ +ALE Y+KM+ G+ P +
Sbjct: 355 LVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHT 414
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
+I K + ++A +F++ + G+ +V NT++S C + + A LL +ME R
Sbjct: 415 IIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHG 490
P++ +Y+ ++ + L P+ T+S+L+ G
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 183/411 (44%), Gaps = 16/411 (3%)
Query: 116 SPELVAQALDGHGFQVSNSSVQQILKRFNND-WVPAFGFFTWAKTQTGYEHSPELYNLMI 174
S + VA LD Q++ + ++K + W A F W + + + + ++
Sbjct: 139 SNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAIL 198
Query: 175 DILGKSKNFDLVWELVEEMAKHEG-YVTLY-TMTKVLRRLTKAGKHEDAIAAFRRMKEFG 232
+LG+ L E+ G V +Y M V R K K ++ + A M++ G
Sbjct: 199 GVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDA---MRQRG 255
Query: 233 VDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG------SFNILMNGWCRVRN 286
D + N L++A +K + + +E ++ NSG ++N L++ R N
Sbjct: 256 CVPDLISFNTLINARLKSGGL--TPNLAVELLDMVR-NSGLRPDAITYNTLLSACSRDSN 312
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
D A KV EDM+ H PD+++YN+ I Y + +++ E+ G P+AVTY
Sbjct: 313 LDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNS 372
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK-Q 405
+++A + + EVY++M+ G D Y+++I + GK G+L A +++DM
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G D +TY +I + +R A L+ EM + KP L+TY
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
M ++ PD +S+++ L + + A + ++IS G TP +
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY 543
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 174/401 (43%), Gaps = 54/401 (13%)
Query: 81 AHILDAKPKLVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNS----SV 136
A ILDA+ +TPT DY + ++ +E V + L+ + N+ ++
Sbjct: 144 ADILDARLVQMTPT------DYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAI 197
Query: 137 QQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH 196
+L R+N + + A FT A+ G ++YN M+ + +S F ELV+ M +
Sbjct: 198 LGVLGRWNQESL-AVEIFTRAEPTVG--DRVQVYNAMMGVYSRSGKFSKAQELVDAMRQR 254
Query: 197 EGYVTLYTMTKVLR-RLTKAGKHED-AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE 254
L + ++ RL G + A+ ++ G+ D N L+ A + ++++
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 255 HAHGVL-------------------------------------LEFKSLIPLNSGSFNIL 277
A V LE K P ++ ++N L
Sbjct: 315 GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP-DAVTYNSL 373
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE-NG 336
+ + R RN ++ ++V + M++ GF D +YN+ I Y Q+ ++M +G
Sbjct: 374 LYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSG 433
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
P+A+TYT+++ +LGKA + +A + +M GI P YS+LI KAG+ ++A
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAE 493
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
D F M + G D + Y+ M+ + A L ++M
Sbjct: 494 DTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 157/387 (40%), Gaps = 3/387 (0%)
Query: 112 EHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVP--AFGFFTWAKTQTGYEHSPEL 169
EH++ V L G + S S + ++ + P A A+T+ + +
Sbjct: 695 EHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPM 754
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +I+ GK K + +V + + L T ++ + G +E A A F M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
G ++N+L+ AL +E + V+ E + + ++ S ++++ + R N
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+ +K+ MK G++P + Y IE C K R + ++ EM E + ++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ ++VY+++K G+ PD Y++LI + + R ++ + + M G+
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+ TY ++IS E A +L +E+ + K D YH
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSG 495
+ M + P L T LL+ SG
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 142/347 (40%), Gaps = 38/347 (10%)
Query: 204 TMTKVLRRLTKAGKH-EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL-- 260
TM + L A +H +A F ++ G + + ++ K E AH V+
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQ 741
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY---- 316
E K S + ++ + + + + +A V+ ++++ G PD+ ++NS + +Y
Sbjct: 742 AETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 317 -------------------------------CHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
C D ++ V+EE+ + G + +
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSIL 861
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+++ A +AG + + ++Y MK+ G +P Y +I +L K R++DA + +M +
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
++ +N+M+ A + +++ + ++E +PD TY+
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
+ M L P L T+ L+ K L+ A FEEL+S+GL
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 153/407 (37%), Gaps = 49/407 (12%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y ++ID LGK+ L+ EM TL T + ++ KAGK E+A F M
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGS-FNILMNGWCRVRNFD 288
G D A ++++D L++GN A G+ + S S + + +++ G + D
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+K + DM+E + + + ++ C D R++ + NG T ++
Sbjct: 561 DIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAIT----NGYELENDTLLSIL 616
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD----------- 397
+ +G+ S+A E+ E +K H +LI + K L A D
Sbjct: 617 GSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGW 676
Query: 398 --------------------------VFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
VF D+ G +M+ C ETA
Sbjct: 677 CFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAH 736
Query: 432 RLLKEMEER----SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
+++ + E + +C P Y ++ ++ +PDL T++ L
Sbjct: 737 QVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSL 793
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+ + G + A + F ++ G +P ++ L+ L L+E
Sbjct: 794 MSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 166/360 (46%), Gaps = 8/360 (2%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+Y+ +ID L K + L EM + ++T ++ G+ DA R M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRN 286
E ++ D N L+ A VK + A + E + + P ++ ++N ++ G+C+
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNR 416
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
FD A+ + + M PDV ++N+ I+ YC K + Q+L E+S G N TY
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ + L+ A +++++M SHG+ PDT + L++ + +L++A ++FE +
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
I D V YN +I C S+ + A L + +PD++TY+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
M N PD T++ L+ G K+G++D + E+ S G + +K +V DL
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADL 651
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 22/348 (6%)
Query: 181 KNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAAL 240
K+ D + + M + + T KV+ + + + AI+ +R+M+ + ++ +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 241 NMLMDALVKGNSVEHAHGVLLEFKSLIPL----NSGSFNILMNGWC---RVR-------- 285
N+L+ + + + L F L L + +FN L++G C R+
Sbjct: 145 NILIKCFCDCHKLSFS---LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 286 ----NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
F +A + + M E G P V ++N+ I C + + ++ +M G +
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
VTY ++ + K G AL + KM+ I PD YS++I L K G DA +F +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX 461
M ++GI +V TYN MI C+ R A RLL++M ER PD+ T++
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 462 XXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ M + PD T++ +++G K + D A F+ + S
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 7/340 (2%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN MID + L+ +M + E + T ++ K GK +A M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
+ DT N ++ K N + A + F + + +FN +++ +CR + D+
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHM---FDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
+++ ++ G V + +YN+ I +C + + +EM +G P+ +T I+++
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
+ +L +ALE++E ++ I DT Y+ +I + K ++ +A D+F +P G+
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
DV TYN MIS C S A L +M++ +PD TY+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
M N S D T +V L G+LD + F +++S
Sbjct: 631 SEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDMLS 666
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 5/306 (1%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
+ T ++ L G+ +A A +M G+ +D +++ + K + A +L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 261 LEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
+ + I + ++ +++ C+ + A+ + +M E G P+VF+YN I+ +C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+ ++L +M E P+ +T+ ++ A K G+L +A ++ ++M I PDT Y
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+S+I+ K R DA +F+ M DVVT+NT+I C R + ++LL+E+
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
R + TY+ + M + + PD T ++L++G ++ KL+
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 500 ACSFFE 505
A FE
Sbjct: 521 ALELFE 526
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 153/348 (43%), Gaps = 7/348 (2%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
LV +M ++ + T ++ + K G + A+ +M+E + D + ++D L
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 249 KGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
K A + E K + P N ++N +++G+C + A++++ DM E PDV
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAP-NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++N+ I + + + +++ +EM P+ VTY +++ K + A +++
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M S PD ++++I + +A R+ + + ++ ++G+V + TYNT+I C
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
A L +EM PD T + E + + + D +++
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
++HG+ K K+D A F L G+ P ++ KS + +
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 161/353 (45%), Gaps = 4/353 (1%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G H NL+++ +S L + +M K + T T ++ + E+A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
++ +M E G+ D ++D+L K V +A + + ++ I + + L+NG
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
C + A ++ M + PDV ++N+ I+++ + F +++ EM PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TYT ++ G + +A +++ M++ G PD Y+SLI K ++ DA +F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
+M ++G+ + +TY T+I + A + M R P++ TY+
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 461 XXXXXXXXXEHMFKNDL---SPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
E M K ++ +P++ T+++L+HGL +GKL+ A FE++ R
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 158/346 (45%), Gaps = 4/346 (1%)
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFG 232
+++++ K K FD+V L + + LYT ++ ++ + A + +M + G
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 233 VDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQAR 291
+ D L++ GN +E A ++ + + I + + +++ C+ + + A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 292 KVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
+ + M+ +G PDV Y S + C+ +R D +L M++ P+ +T+ ++ A
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
K G+ A E+Y +M I P+ Y+SLI G + +A +F M +G DV
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
V Y ++I+ C + + A+++ EM ++ + TY H
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR---GLTP 514
M + P++ T+++L+H L +GK+ A FE++ R G+ P
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 1/336 (0%)
Query: 180 SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
S F+ +L M + ++ TK+L + K K + I ++ GV D
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 240 LNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
N+LM+ + + A L + L + +F L+NG+C ++A ++ M
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
E G PDV Y + I+S C + + ++M G P+ V YT ++ L +G+
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
A + M I PD +++LI K G+ DA +++ +M + I ++ TY ++I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 419 STACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLS 478
+ C + A ++ ME + C PD+ Y M + L+
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 479 PDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ T++ L+ G + GK + A F ++SRG+ P
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N +ID K F EL EM + ++T T ++ G ++A F M+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G D A L++ K V+ A + E + + N+ ++ L+ G+ +V +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE---NGCPPNAVTYT 345
A++V M G P++ +YN + C++ +K + E+M + +G PN TY
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+++ L G+L +AL V+E M+ + Y+ +I + KAG++K+A ++F +P +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
G+ +VVTY TMIS + A L ++M+E
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 126/320 (39%), Gaps = 21/320 (6%)
Query: 245 DALVKGNSVEHAHGVLLEFKSLIPLN------SGSFNILMNGWCRVRNFDQARKVMEDMK 298
+ LVKGNS G L F L+ L+ IL NG ++ F++A + M
Sbjct: 11 NRLVKGNS-----GKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQ-FNEALDLFTHMV 64
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
E +P + + + K F V + + + G + T ++M ++ Q
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLI--FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
A KM G PD ++SLI F LG R+++A + M + GI DVV Y T
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGN--RMEEAMSMVNQMVEMGIKPDVVMYTT 182
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
+I + C + AL L +ME +PD+ Y M K
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKE 536
+ PD+ TF+ L+ K GK A + E+I + P L+ + + E
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 537 HIEKLMT-----PPSIRFTS 551
+ LM P + +TS
Sbjct: 303 QMFYLMETKGCFPDVVAYTS 322
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 4/350 (1%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
+ ++Y ++ I K + +L EEM + T+YT T++++ L KAG+ ++A +
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCR 283
+ M G+ D LN LM+ L K VE V E P S+N ++
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP-TVVSYNTVIKALFE 385
Query: 284 VR-NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ + + + MK P F+Y+ I+ YC K +LEEM E G PP
Sbjct: 386 SKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
Y ++ ALGKA + A E+++++K + + Y+ +I GK G+L +A D+F +M
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
QG DV YN ++S A LL++MEE C+ D+ +++
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP 565
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
E + + + PD T++ L+ +G + A E+ +G
Sbjct: 566 RRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 187/437 (42%), Gaps = 43/437 (9%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTL--YTMTKVLR 210
FF WA + ++H Y +I L +++ + ++ ++E+ ++ YV++ ++++++
Sbjct: 112 FFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNT-YVSVSPAVLSELVK 170
Query: 211 RLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF---KSLI 267
L +A A++ F + K ++ N ++ L++ E H V E
Sbjct: 171 ALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF 230
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
P ++ +++ L++ + ++ D A ++ ++MK++ P Y + + Y K
Sbjct: 231 P-DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
+ EEM GC P TYT ++ LGKAG++ +A Y+ M G+ PD F ++L+ ILG
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA-------------------------- 421
K GR+++ +VF +M VV+YNT+I
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSE 409
Query: 422 ----------CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
C +R E AL LL+EM+E+ P Y +
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSM 531
+ +N + +++++ K GKL A F E+ ++G P A L+ + M
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 532 LKEKEHIEKLMTPPSIR 548
+ E + + M R
Sbjct: 530 INEANSLLRKMEENGCR 546
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 170 YNLMIDILGKSK-NFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
YN +I L +SK + V ++M + +T + ++ K + E A+ M
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNILMNGWCRVRNF 287
E G AA L++AL K E A+ + E K + ++S + +++ + +
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+A + +MK G PDV++YN+ + + + +L +M ENGC + ++ I+
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII 555
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + G +A+E++E +K GI PD Y++L+ AG ++A + +M +G
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 408 VRDVVTYNTMI 418
D +TY++++
Sbjct: 616 EYDAITYSSIL 626
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 34/240 (14%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G+ P Y +I+ LGK+K ++ EL +E+ ++ G V+ +++ K GK
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMN 279
+A+ F MK G D A +N LM+
Sbjct: 497 EAVDLFNEMKNQGSGPDVYA----------------------------------YNALMS 522
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G + ++A ++ M+E+G D+ S+N + + R+ ++ E + +G P
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
+ VTY ++ AG +A + +MK G D YSS++ +G KD F
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 178/400 (44%), Gaps = 22/400 (5%)
Query: 131 VSNSSVQQILKRFNNDWVPAFG--FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWE 188
+S ++V Q L+ VPA G FF W + G+ H + + LM++ LG+++N ++
Sbjct: 66 ISRTTVLQTLRLIK---VPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARN 121
Query: 189 LVEEMAKHE-GYVTLYT--MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMD 245
+ + + G V L ++R AG ++++ F+ MK+ G+ N L+
Sbjct: 122 FLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLS 181
Query: 246 ALVKGNSVEHAHGVLLEFKSL--IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFV 303
L+K AH + E + + +S +FN L+NG+C+ D+A ++ +DM+ +
Sbjct: 182 ILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN 241
Query: 304 PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP--PNAVTYTIVMFALGKAGQLSQAL 361
PDV +YN+ I+ C + VL M + PN V+YT ++ ++ +A+
Sbjct: 242 PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAV 301
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF--EDMPKQGIVRDVVTYNTMIS 419
V+ M S G+ P+ Y++LI L +A R + D+ + D T+N +I
Sbjct: 302 LVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIK 361
Query: 420 TACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF------ 473
C + A+++ +EM PD +Y +F
Sbjct: 362 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLL 421
Query: 474 -KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
K++ P ++ + L +GK A F +L+ RG+
Sbjct: 422 GKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV 461
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
Query: 331 EMSENGCPPNAVTY-TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E NGC Y ++ + G AG +++++++ MK GI P ++SL+ IL K
Sbjct: 127 ERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 390 GRLKDACDVFEDMPKQ-GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
GR A D+F++M + G+ D T+NT+I+ C +S + A R+ K+ME C PD+ T
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFK--NDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE 506
Y+ M K D+ P++ +++ LV G ++D A F +
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 507 LISRGLTPRHGALKQLVKDL 526
++SRGL P L+K L
Sbjct: 307 MLSRGLKPNAVTYNTLIKGL 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 155/389 (39%), Gaps = 26/389 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTL----YTMTKVLRRLTKAGKHEDAIAAF 225
YN +I L ++ +D + +++ + ++ + T T +++ AG + A+ F
Sbjct: 319 YNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHG---------VLLEFKSLIPLNSGSFNI 276
+ M + D+A+ ++L+ L N + A VLL PL + ++N
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL-AAAYNP 435
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
+ C QA KV + + G V D SY + I +C + F+ ++L M
Sbjct: 436 MFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRRE 494
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
P+ TY +++ L K G+ A + ++M +P + S++ L K ++
Sbjct: 495 FVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESF 554
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETA---LRLLKEMEERSCKPDLETYHPXX 453
+ M ++ I +++ ++ + +++E A +RLL + +L Y
Sbjct: 555 CLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCEN 614
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M D+ T + ++ GL K + A S + EL+ G
Sbjct: 615 RKLLDAHTLVLFCLEKSQMV------DIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNH 668
Query: 514 PRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
+ L LEA +E + + K M
Sbjct: 669 QQLSCHVVLRNALEAAGKWEELQFVSKRM 697
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 4/316 (1%)
Query: 225 FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWC 282
R++ E G D++ N M L+KG+ + + F + + P +G + +L+
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG-YLVLVQALL 401
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ F + + ++ M G + V+SYN+ I+ C + L EM + G PN V
Sbjct: 402 NAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV 461
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
T+ + G + + V EK+ HG PD +S +I L +A +KDA D F++M
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
+ GI + +TYN +I + C+ + +++L +M+E PDL Y+
Sbjct: 522 LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKV 581
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
+ M + L PD T+S L+ L +SG+ A F + G P K+L
Sbjct: 582 KKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP-DSYTKRL 640
Query: 523 VKDLEAKSMLKEKEHI 538
V++L+ + +E +
Sbjct: 641 VEELDLRKSGLSRETV 656
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 163/387 (42%), Gaps = 10/387 (2%)
Query: 140 LKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY 199
L ++ ND F G + S LYN +ID L KS + DL + ++M
Sbjct: 160 LAKYCNDVFAQISFL-------GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCK 212
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
+T ++ + K G ++AI ++M++ G + +L+D + V+ A
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ 272
Query: 260 L--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
L + + L P N + ++G R +A +V+ E Y++ +
Sbjct: 273 LEMMRVRKLNP-NEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLS 331
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTP 377
++ ++ Q L ++ E G P++ T+ M L K L + +++ S G+ P
Sbjct: 332 NNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN 391
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
Y L+ L A R + + M G++ V +YN +I C R E A L EM
Sbjct: 392 GYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM 451
Query: 438 EERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
++R P+L T++ E + + PD+ TFSL+++ L ++ ++
Sbjct: 452 QDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEI 511
Query: 498 DHACSFFEELISRGLTPRHGALKQLVK 524
A F+E++ G+ P L++
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNILIR 538
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 10/213 (4%)
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
++L+E+ ++G + +++ + G+ G +V+ ++ G+ P T Y+++I L
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 387 GKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDL 446
K+ L A F+ M G D TYN +I C + A+RL+K+ME+ +P++
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 447 ETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE 506
TY E M L+P+ T VHG+ + C FE
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLP---PCKAFEV 307
Query: 507 LISRGLTPRHGALKQLVKD-----LEAKSMLKE 534
L+ G + L+++ D L SM KE
Sbjct: 308 LV--GFMEKDSNLQRVGYDAVLYCLSNNSMAKE 338
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 108/302 (35%), Gaps = 7/302 (2%)
Query: 248 VKGNSVEHAHGVLLEFKSLIPLNSGSFNI-------LMNGWCRVRNFDQARKVMEDMKEH 300
V GN++ +LL + L + + I L+ W R+ V +
Sbjct: 115 VLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFL 174
Query: 301 GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
G P YN+ I++ ++M +GC P+ TY I++ + K G + +A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
+ + ++M+ G P+ Y+ LI AGR+ +A E M + + + T T +
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 421 ACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPD 480
A +L E+ Y + + PD
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 481 LGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEK 540
TF+ + L K L C F+ +SRG+ P LV+ L E + K
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 541 LM 542
M
Sbjct: 415 QM 416
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 155/344 (45%), Gaps = 3/344 (0%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEH--AHG 258
T Y +VLR + +DAI F M + + L+ A+ K N + + G
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 259 VLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
+E I N ++NIL+N +CR A ++ M + G+ PD+ + NS + +CH
Sbjct: 102 EKMEILG-ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCH 160
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
++++M E G P+ VT+T ++ L + S+A+ + ++M G PD
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
Y +++ L K G A ++ M I +VV Y+T+I + C + E+ AL L EME
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
+ +P++ TY M + ++P+L TFS L+ K GKL
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 499 HACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
A +EE+I R + P L+ L E + + +LM
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 1/356 (0%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ GYE N +++ LV++M + T T ++ L K
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
+A+A RM + G D +++ L K + A +L + ++ I N ++ ++
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ C+ R+ D A + +M+ G P+V +Y+S I C+ + ++L +M E
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN VT++ ++ A K G+L +A ++YE+M I P+ YSSLI RL +A +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
E M ++ + +VVTYNT+I+ C R + + L +EM +R + TY
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M + P++ T+++L+ GL K+GKL A FE L + P
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 145/295 (49%), Gaps = 5/295 (1%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM--AKHEGYVTLYTMTKVLRRLTKAG 216
Q G + Y +++ L K + DL L+ +M AK E V +Y+ V+ L K
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS--TVIDSLCKYR 267
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFN 275
+DA+ F M+ GV + + L+ L A +L + + I N +F+
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
L++ + + +A K+ E+M + P++F+Y+S I +C + Q+LE M
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
C PN VTY ++ KA ++ + +E++ +M G+V +T Y++LI +A +A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
VF+ M G+ +++TYN ++ C + + A+ + + ++ + +PD+ TY+
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 1/264 (0%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
E + +Y+ +ID L K ++ D L EM + T + ++ L G+ DA
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWC 282
M E ++ + + L+DA VK + A + E K I N +++ L+NG+C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ +A++++E M +P+V +YN+ I +C K K ++ EMS+ G N V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
TYT ++ +A A V+++M S G+ P+ Y+ L+ L K G+L A VFE +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 403 PKQGIVRDVVTYNTMISTACAHSR 426
+ + D+ TYN MI C +
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGK 513
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 163/358 (45%), Gaps = 15/358 (4%)
Query: 158 KTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGK 217
K +TG+ HS F+ + L EM + ++ T++L +
Sbjct: 41 KLRTGFLHSIR--------------FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRR 86
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNI 276
+E I ++M+ +G+ D + +L+ + + + A VL + L + +F
Sbjct: 87 YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L++G+C V A ++ M + G+ P+V YN+ I+ C + + ++L EM + G
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
+ VTY ++ L +G+ S A + M I PD +++LI + K G L +A
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
+++++M + + + VTYN++I+ C H R A + M + C P++ TY+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M + D+ T++ L+HG + GKL A F ++SR +TP
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 7/295 (2%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
++GYE + +YN +ID L K+ ++ EL+ EM K + T +L L +G+
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNIL 277
DA R M + ++ D L+D VK +++ A + E +S + N+ ++N +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ---VLEEMSE 334
+NG C A+K + M G P+V +YN+ I +C FR VD+ + + MS
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK---FRMVDEGMKLFQRMSC 344
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
G + TY ++ + G+L AL+++ M S + PD + L+ L G ++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
A F+DM + +V YN MI C + E A L + KPD TY
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 144/307 (46%), Gaps = 1/307 (0%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHG-VL 260
LY+ T ++ + + A++ +M + G + L+ N + A V+
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
L KS N +N L++G C+ + A +++ +M++ G DV +YN+ + C+
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ ++L +M + P+ VT+T ++ K G L +A E+Y++M + P+ Y+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
S+I L GRL DA F+ M +G +VVTYNT+IS C + ++L + M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
D+ TY+ M ++PD+ T +L+HGL +G+++ A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 501 CSFFEEL 507
F+++
Sbjct: 406 LVKFDDM 412
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 142/343 (41%), Gaps = 8/343 (2%)
Query: 209 LRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMD-------ALVKGNSVEHAHGVLL 261
+RRL G FRR+ + AA D + E A +
Sbjct: 1 MRRLIVTGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFF 60
Query: 262 EFKSLIPLNS-GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
E PL S F L+ +R ++ + M+ +G D++S+ I +C
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
VL +M + G P+ VT+ ++ ++ A + M G P+ Y+
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
+LI L K G L A ++ +M K+G+ DVVTYNT+++ C R A R+L++M +R
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
S PD+ T+ + M ++ + P+ T++ +++GL G+L A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 501 CSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
F+ + S+G P L+ M+ E + + M+
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 3/241 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+ +ID+ K N D EL +EM + T ++ L G+ DA F M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG--SFNILMNGWCRVRNF 287
G + N L+ K V+ L + S N+ ++N L++G+C+V
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMK-LFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
A + M PD+ ++ + C + + ++M E+ V Y I+
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ L KA ++ +A E++ ++ G+ PD Y+ +I L K G ++A ++ M ++GI
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Query: 408 V 408
+
Sbjct: 488 I 488
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 170/381 (44%), Gaps = 1/381 (0%)
Query: 145 NDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYT 204
NDW + W + Y S YN+++ + ++K FD+ L +EM + YT
Sbjct: 133 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYT 192
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK 264
+ ++ K G + A++ ++M++ V D + L++ + A + K
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 265 -SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
S I + ++N ++N + + + F +AR ++++M E G +P+ SY++ + Y + F
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ V EM E C + T I++ G+ + +A ++ ++ I P+ Y++++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
+ G+A +A +F M ++ I ++VVTYNTMI E A L++EM+ R +
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
P+ TY + + + + D + ++ + G + HA
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 504 FEELISRGLTPRHGALKQLVK 524
EL PR A+ L K
Sbjct: 493 LHELKLPDNIPRETAITILAK 513
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 151/334 (45%), Gaps = 37/334 (11%)
Query: 146 DWVPAFGFFTWAKTQTGYEHSPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
D+ A F+ K ++G +P+L YN MI++ GK+K F L++EM +
Sbjct: 240 DYSKAISIFSRLK-RSGI--TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
+ + +L + K +A++ F MKE +D N+++D + + V+ A +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 264 KSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+ + I N S+N ++ + F +A + M+ +V +YN+ I+ Y +
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
K +++EM G PNA+TY+ ++ GKAG+L +A +++K++S G+ D Y ++
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Query: 383 IF-------------------------------ILGKAGRLKDACDVFEDMPKQGIVRDV 411
I IL KAGR ++A VF + G V+D+
Sbjct: 477 IVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 536
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
+ MI+ + R + + ++M PD
Sbjct: 537 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPD 570
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 50/279 (17%)
Query: 171 NLMIDILGKSKNFDLVWE---LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR 227
N+MID+ G+ D+V E L + K + + + +LR +A +AI FR
Sbjct: 334 NIMIDVYGQ---LDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 390
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEH--AHGVLLEFKSL-IPLNSGSFNILMNGWCRV 284
M+ ++ + N ++ + G ++EH A ++ E +S I N+ +++ +++ W +
Sbjct: 391 MQRKDIEQNVVTYNTMIK--IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
D+A + + ++ G D Y + I +Y ++L E+ P
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508
Query: 345 TIVMFALGKAGQLSQA-----------------------------------LEVYEKMKS 369
TI L KAG+ +A +EV+EKM++
Sbjct: 509 TI----LAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRT 564
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
G PD+ + ++ GK + A V+ +M ++G V
Sbjct: 565 AGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 603
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Query: 212 LTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPL 269
L KAG+ E+A FR+ E G D + +++ + + V + ++ P
Sbjct: 511 LAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP- 569
Query: 270 NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFV-PDVFSYNSFIESYCHDKDFRKVDQV 328
+S +++N + + R F++A V +M+E G V PD + + Y KDF V+ +
Sbjct: 570 DSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESL 628
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTP 377
+ + + + + +V +A +L+ A V +M+ GI+ P
Sbjct: 629 FQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFP 677
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 182/459 (39%), Gaps = 56/459 (12%)
Query: 119 LVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILG 178
L+ + L HG +++ V+ +L R + F GY
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGY--------------- 286
Query: 179 KSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA 238
FD WEL+ M + + T + +L KAG ++A + ++K FG+ D+
Sbjct: 287 ----FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 239 ALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
+++ ++D K E A ++ F+ L P N ++ ++ C + +A + +++
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKLIHSFR-LRP-NIFVYSSFLSNICSTGDMLRASTIFQEIF 400
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
E G +PD Y + I+ YC+ K Q + ++G PP+ T TI++ A + G +S
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
A V+ MK+ G+ D Y++L+ GK +L ++ ++M GI DV TYN +I
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 419 STACAHSREETALRLLKEMEERS-----------------------------------CK 443
+ + A ++ E+ R K
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
PD+ T + L PD+ ++ L+HG G ++ AC
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 504 FEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
++ RG+ P LV LE K + + H L+
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLL 679
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 201/479 (41%), Gaps = 36/479 (7%)
Query: 101 DYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPA---FGFFTWA 157
D VE I +L +H+ + + G ++ +V +IL + + A FF W+
Sbjct: 81 DCVETIRNVLVKHN----WIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWS 136
Query: 158 KTQTGYEHSPELYNLMIDILGKS----KNFDLVWELVEEMAKHEGYVTLYTM----TKVL 209
+ G EHS + MI IL + D++ LV++ + E + L T++
Sbjct: 137 ELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRID 196
Query: 210 RRL------------TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
RR+ + K A+ ++ +FG+ L+ +++ + +E A
Sbjct: 197 RRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAR 256
Query: 258 GVLLEFKSLIP-LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
+ S LN+ ++ + +C FD+ +++ MK +G PD+ ++ FI+
Sbjct: 257 EFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKL 316
Query: 317 CHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDT 376
C ++ VL ++ G ++V+ + V+ K G+ +A+++ + S + P+
Sbjct: 317 CKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNI 373
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
YSS + + G + A +F+++ + G++ D V Y TMI C R + A +
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
+ + P L T +M L D+ T++ L+HG K+ +
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE-----KEHIEKLMTPPSIRFT 550
L+ +E+ S G++P L+ + + + E E I + P ++ FT
Sbjct: 494 LNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 182/459 (39%), Gaps = 56/459 (12%)
Query: 119 LVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILG 178
L+ + L HG +++ V+ +L R + F GY
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGY--------------- 286
Query: 179 KSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA 238
FD WEL+ M + + T + +L KAG ++A + ++K FG+ D+
Sbjct: 287 ----FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 239 ALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
+++ ++D K E A ++ F+ L P N ++ ++ C + +A + +++
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKLIHSFR-LRP-NIFVYSSFLSNICSTGDMLRASTIFQEIF 400
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
E G +PD Y + I+ YC+ K Q + ++G PP+ T TI++ A + G +S
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
A V+ MK+ G+ D Y++L+ GK +L ++ ++M GI DV TYN +I
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 419 STACAHSREETALRLLKEMEERS-----------------------------------CK 443
+ + A ++ E+ R K
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
PD+ T + L PD+ ++ L+HG G ++ AC
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 504 FEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
++ RG+ P LV LE K + + H L+
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLL 679
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 201/479 (41%), Gaps = 36/479 (7%)
Query: 101 DYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPA---FGFFTWA 157
D VE I +L +H+ + + G ++ +V +IL + + A FF W+
Sbjct: 81 DCVETIRNVLVKHN----WIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWS 136
Query: 158 KTQTGYEHSPELYNLMIDILGKS----KNFDLVWELVEEMAKHEGYVTLYTM----TKVL 209
+ G EHS + MI IL + D++ LV++ + E + L T++
Sbjct: 137 ELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRID 196
Query: 210 RRL------------TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
RR+ + K A+ ++ +FG+ L+ +++ + +E A
Sbjct: 197 RRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAR 256
Query: 258 GVLLEFKSLIP-LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
+ S LN+ ++ + +C FD+ +++ MK +G PD+ ++ FI+
Sbjct: 257 EFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKL 316
Query: 317 CHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDT 376
C ++ VL ++ G ++V+ + V+ K G+ +A+++ + S + P+
Sbjct: 317 CKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNI 373
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
YSS + + G + A +F+++ + G++ D V Y TMI C R + A +
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
+ + P L T +M L D+ T++ L+HG K+ +
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE-----KEHIEKLMTPPSIRFT 550
L+ +E+ S G++P L+ + + + E E I + P ++ FT
Sbjct: 494 LNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 163/398 (40%), Gaps = 73/398 (18%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +ID K+ N + +++ E M +L T +L+ L KAG EDA + MK
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 230 EFG-----------------------------------VDMDTAALNMLMDALVKGNSVE 254
+ G V M+ ++L++AL K +E
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 255 HAHGVLLE--FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSF 312
A +L K L+P N +N +++G+CR + AR +E M++ G PD +YN
Sbjct: 372 KAEEILGREMAKGLVP-NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 313 IESYC-----------------------------------HDKDFRKVDQVLEEMSENGC 337
I +C +F K +L+EM +NG
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
PN V+Y ++ L K +L +A V M+ G+ P Y+ LI G+++DA
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
++M K+GI ++VTYNT+I + A LL E+ + KPD+ TY+
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSG 495
E M ++ + P L T+ LL+ K G
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 157/360 (43%), Gaps = 11/360 (3%)
Query: 169 LYNLMIDILGKSKNFDLVWEL--VEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFR 226
+YN MID G + DLV +E M K ++RR + G+ E+A
Sbjct: 391 IYNTMID--GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRV 284
+MK GV N+L+ + + +L +E +P N S+ L+N C+
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP-NVVSYGTLINCLCKG 507
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
+A+ V DM++ G P V YN I+ C + +EM + G N VTY
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK 404
++ L G+LS+A ++ ++ G+ PD Y+SLI G AG ++ ++E+M +
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 405 QGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXX 464
GI + TY+ +IS C E RL EM S KPDL Y+
Sbjct: 628 SGIKPTLKTYHLLISL-CTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 465 XXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ M + + D T++ L+ G K GKL S +E+ +R + P +VK
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 161/381 (42%), Gaps = 34/381 (8%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+YN++ID L K K + +L +EM +L T ++ KAG E + RM
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFD 288
K +H L+ +FN L+ G + +
Sbjct: 276 K-----------------------ADHIEPSLI-----------TFNTLLKGLFKAGMVE 301
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A V+++MK+ GFVPD F+++ + Y ++ V E ++G NA T +I++
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
AL K G++ +A E+ + + G+VP+ Y+++I + G L A E M KQG+
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
D + YN +I C E A + + +M+ + P +ETY+
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEA 528
+ M N P++ ++ L++ L K KL A ++ RG++P+ L+ +
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 529 KSMLKEKEHIEKLMTPPSIRF 549
K +++ K M I
Sbjct: 542 KGKIEDAFRFSKEMLKKGIEL 562
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 129/311 (41%), Gaps = 32/311 (10%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G S E YN++I G+ FD +++++EM + + + ++ L K K +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNG 280
R M++ GV NML+D +E A E K I LN ++N L++G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+A ++ ++ G PDVF+YNS I Y + ++ + EEM +G P
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 341 AVTYTIVMFALGKAG-------------------------------QLSQALEVYEKMKS 369
TY +++ K G + +A + ++M
Sbjct: 634 LKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREET 429
I D Y+SLI K G+L + + ++M + + + TYN ++ C +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 430 ALRLLKEMEER 440
A +EM+E+
Sbjct: 754 AYVWYREMQEK 764
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%)
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
++ G P S ++ K FR V + E+ P+ Y + A K
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
+ + LE++ +MK I P Y+ LI L K R+ DA +F++M + ++ ++TYNT
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
+I C E + ++ + M+ +P L T++ + M
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKE 536
PD TFS+L G + K + A +E + G+ L+ L + +++ E
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 537 HI 538
I
Sbjct: 375 EI 376
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 189/453 (41%), Gaps = 61/453 (13%)
Query: 122 QALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKT-QTGYEHSPELYNLMIDILGKS 180
++LD + +S V QIL+R + D FF W + + GY+HS Y+ + + ++
Sbjct: 46 RSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRT 105
Query: 181 KNFDLVWELVEEMAKHEGYVTLYTMTKVL-RRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
V +L+ M K +G TM K+L L ++GK E A+ M+E G ++ +
Sbjct: 106 GLLGEVPDLLGSM-KEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSV 164
Query: 240 LNMLMDALVKGNSVEHAHGVLL-------------------------------------- 261
+ ++ ALVK + + A +L
Sbjct: 165 YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRR 224
Query: 262 -----EFKSL---------IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH------G 301
EFK + ++ S+NI ++G+ + D A + ++MKE
Sbjct: 225 ADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSS 284
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
F PD+ +YNS I C + V +E+ +G P+ TY I++ K+ ++ A+
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
+Y +M+ +G VPDT Y+ L+ KA ++ +AC +FE M ++G+ TYN +I
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
Query: 422 CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDL 481
+ R E L +++++ D T+ E M S DL
Sbjct: 405 FRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDL 464
Query: 482 GTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
T S L+ G K G+ D + + L P
Sbjct: 465 VTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%)
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++YNS + S+ F+ VL++M EN C + TY +++ LGK G+ A V ++
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
+ G D Y++LI LGKA RL +A +F+ M GI DVV+YNTMI +
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 427 EETALRLLKEMEERSCKPD 445
+ A + LK M + C P+
Sbjct: 751 LKEAYKYLKAMLDAGCLPN 769
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 13/241 (5%)
Query: 216 GKHEDAIAAFRRMKE--------FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--S 265
G + A++ F+ MKE FG D+ T N L+ L + A V E K
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICT--YNSLIHVLCLFGKAKDALIVWDELKVSG 319
Query: 266 LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKV 325
P NS ++ IL+ G C+ D A ++ +M+ +GFVPD YN ++ + +
Sbjct: 320 HEPDNS-TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
Q+ E+M + G + TY I++ L + G+ ++ +K G D +S +
Sbjct: 379 CQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ 438
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
L + G+L+ A + E+M +G D+VT ++++ R + +L+K + E + P+
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Query: 446 L 446
+
Sbjct: 499 V 499
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
L S ++N +M+ + + F AR V++ M E+ D+ +YN I+ V
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
L+ +++ G + V Y ++ ALGKA +L +A ++++ MKS+GI PD Y+++I + K
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVT 413
AG+LK+A + M G + + VT
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 171/409 (41%), Gaps = 29/409 (7%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ +YN ++D K++ +L E+M + + +T ++ L + G+ E
Sbjct: 354 GFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG 413
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
F +K+ G +D +++ L + +E A ++ E ++ ++ + + L+ G
Sbjct: 414 FTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIG 473
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES-----YCHDKDFRKV----DQVLEE 331
+ + +D K+M+ ++E VP+V +N+ +E+ DKD+ + L+
Sbjct: 474 FHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDI 533
Query: 332 MSENGCPPNAVT-----------YTIVMFALGKAGQLSQ-----ALEVYEKMKSHGIVPD 375
MS G + + ++ + A Q +Q L +++++ D
Sbjct: 534 MSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFD 593
Query: 376 TPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV--TYNTMISTACAHSREETALRL 433
++ + I G L AC +FE G V D+ TYN+M+S+ +TA +
Sbjct: 594 VDMMNTFLSIYLSKGDLSLACKLFEIFNGMG-VTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
L +M E C D+ TY+ + + K D+ ++ L++ L K
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 494 SGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
+ +LD A F+ + S G+ P + +++ LKE K M
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM 761
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 122/279 (43%), Gaps = 21/279 (7%)
Query: 151 FGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVT------LYT 204
F F TW+ YN+ I G + D L +EM + + T
Sbjct: 244 FKFDTWS------------YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICT 291
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LE 262
++ L GK +DA+ + +K G + D + +L+ K ++ A + ++
Sbjct: 292 YNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ 351
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+ +P ++ +N L++G + R +A ++ E M + G ++YN I+ +
Sbjct: 352 YNGFVP-DTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
+ ++ + G +A+T++IV L + G+L A+++ E+M++ G D SSL
Sbjct: 411 EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
+ K GR + + + + +V +V+ +N + +
Sbjct: 471 LIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEAS 509
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
+T YT ++ K G + A +M E D A N+++ L K + A V
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 260 LLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
L K L+ +N L+N + D+A ++ + MK +G PDV SYN+ IE
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
++ + L+ M + GC PN VT TI+ + LGK
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVTDTILDY-LGK 781
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 221 AIAAFRRMKEFGV-DMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILM 278
A F GV D+ + N +M + VK + A GVL + F++ + ++N+++
Sbjct: 613 ACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
G ++ D A V++ + + G D+ YN+ I + + Q+ + M NG
Sbjct: 673 QGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGIN 732
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
P+ V+Y ++ KAG+L +A + + M G +P+
Sbjct: 733 PDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 40/250 (16%)
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP-NAVTYT 345
F AR + K F DV N+F+ Y D ++ E + G + TY
Sbjct: 577 FGLARGQRVEAKPDSF--DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYN 634
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+M + K G A V ++M + D Y+ +I LGK GR A V + + KQ
Sbjct: 635 SMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQ 694
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G D+V YNT+I+ +R + A +L
Sbjct: 695 GGYLDIVMYNTLINALGKATRLDEATQLF------------------------------- 723
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKD 525
+HM N ++PD+ +++ ++ K+GKL A + + ++ G P H + + D
Sbjct: 724 ----DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNH--VTDTILD 777
Query: 526 LEAKSMLKEK 535
K M K +
Sbjct: 778 YLGKEMEKAR 787
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 164/379 (43%), Gaps = 14/379 (3%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMID---ILGKSKNFDLVWELVEEMAKHEGYVTLYTMT 206
A F ++ G E + YN +I+ ++G + V L+ E VT T
Sbjct: 244 AMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVT---YT 300
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLEF 263
+++ K G E+A F +KE + D +LMD + + A H ++E
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 360
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
+ N+ N L+NG+C+ +A ++ M + PD +YN+ ++ YC
Sbjct: 361 G--VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ ++ ++M + P +TY I++ + G L +++ M G+ D S+L+
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
L K G +A ++E++ +G++ D +T N MIS C + A +L + CK
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
P ++TY E+M + + P + ++ L+ G K L+
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 504 FEELISRGLTP---RHGAL 519
EL +RGLTP +GAL
Sbjct: 599 VIELRARGLTPTVATYGAL 617
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 170/445 (38%), Gaps = 62/445 (13%)
Query: 122 QALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSK 181
+AL S+ + IL+R + F A Q + + Y M+ IL +++
Sbjct: 59 EALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRAR 118
Query: 182 NFDLVWELVEEMA--KHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
N+ + E+ H G+V + +V KEF
Sbjct: 119 NYQQTKSYLCELVALNHSGFVVWGELVRVF-------------------KEF--SFSPTV 157
Query: 240 LNMLMDALVKGNSVEHAHGVLLEFKSL--IPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
+M++ + V++A V + IP ++L N + NF A V + M
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENF-VALHVYDQM 216
Query: 298 KEHGFVPDVFSYNSFIESYCH----DK--------------------------------D 321
PDVF+ + + +YC DK D
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ +VL MSE G N VTYT ++ K G + +A V+E +K +V D Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
L+ + G+++DA V ++M + G+ + N++I+ C + A ++ M + S
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
KPD TY+ + M + ++ P + T+++L+ G + G
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 502 SFFEELISRGLTPRHGALKQLVKDL 526
S ++ ++ RG+ + L++ L
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEAL 481
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 21/287 (7%)
Query: 168 ELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR 227
E+YN +I K ++ + V +LV E+ T+ T ++ G + A A
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNF 287
M E G+ ++ + + ++L + + ++ A L + ++ F++L+ G+ ++ F
Sbjct: 637 MIEKGITLNVNICSKIANSLFRLDKIDEA---CLLLQKIV-----DFDLLLPGYQSLKEF 688
Query: 288 DQA--------RKVMEDMKEHG----FVPDVFSYNSFIESYCHDKDFRKVDQVLEEM-SE 334
+A +K+ E ++ VP+ YN I C ++ ++ S
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
+ P+ TYTI++ AG +++A + ++M GI+P+ Y++LI L K G +
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
A + +P++GI + +TYNT+I A+RL ++M E+
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 151/392 (38%), Gaps = 79/392 (20%)
Query: 171 NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKE 230
N+MI L K + + E+++ + + T + K G ++A A M+
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 231 FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMNGWCRVRNFD 288
G+ N L+ K + +++E ++ L P ++ L+ GWC + D
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP-TVATYGALITGWCNIGMID 628
Query: 289 QARKVMEDMKEHGFVPDV--------------------------FSYNSFIESYCHDKDF 322
+A +M E G +V ++ + Y K+F
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 323 RKVD-------QVLEEMSENGCP-----PNAVTYTIVMFALGKAGQLSQALEVY-EKMKS 369
+ Q + E EN P PN + Y + + L KAG+L A +++ + + S
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREET 429
+PD Y+ LI AG + A + ++M +GI+ ++VTYN +I C +
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 430 ALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVH 489
A RLL ++ ++ P+ TY+ L+
Sbjct: 809 AQRLLHKLPQKGITPNAITYNT-----------------------------------LID 833
Query: 490 GLRKSGKLDHACSFFEELISRGLTPRHGALKQ 521
GL KSG + A E++I +GL G+ KQ
Sbjct: 834 GLVKSGNVAEAMRLKEKMIEKGLV--RGSDKQ 863
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 179/433 (41%), Gaps = 57/433 (13%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN ++D ++ D +L ++M + E T+ T +L+ ++ G D ++ ++ M
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNF 287
+ GV+ D + + L++AL K A + + + L+ ++ + N++++G C++
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT-DTITLNVMISGLCKMEKV 522
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
++A+++++++ P V +Y + Y + ++ V E M G P Y +
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ K L++ ++ ++++ G+ P Y +LI G + A +M ++GI
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 408 VRDVVTYNTMISTACAHSR------EETALRL---------------LKEMEERSCKPDL 446
T N I + A+S +E L L LKE E S L
Sbjct: 643 -----TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 447 ETYH---------------PXXXXXXXXXXXXXXXXXXE---HMFKNDLS-----PDLGT 483
+T P E +F + LS PD T
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 484 FSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI----- 538
+++L+HG +G ++ A + +E+ +G+ P L+K L + + +
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 539 EKLMTPPSIRFTS 551
+K +TP +I + +
Sbjct: 818 QKGITPNAITYNT 830
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 5/253 (1%)
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
KE F P VF + ++ Y + V + M G P+ ++ ++ L + G+
Sbjct: 149 KEFSFSPTVF--DMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGEN 206
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF--EDMPKQGIVRDVVTYN 415
AL VY++M S + PD S ++ ++G + D VF E G+ +VVTYN
Sbjct: 207 FVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNV-DKAMVFAKETESSLGLELNVVTYN 265
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
++I+ E R+L+ M ER ++ TY E + +
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 476 DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEK 535
L D + +L+ G ++G++ A + +I G+ L+ L E
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 536 EHIEKLMTPPSIR 548
E I M S++
Sbjct: 386 EQIFSRMNDWSLK 398
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 189/416 (45%), Gaps = 19/416 (4%)
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
+ D+ AF + + + G++ YN+++D L K + ++ E+M K Y
Sbjct: 216 SRDYSKAFDVYCEIR-RGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEY 271
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T T ++R + + GK ++A+ F M G+ ++ N LM L KG V+ A V F
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV---F 328
Query: 264 KSLIPL----NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
++ N ++++L+N + V+E K + ++SY + +
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY-MTQGIYSY--LVRTLSKL 385
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+ ++ +M +Y ++ +L AG+ +A+E+ K+ G+V DT Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+++ LGK ++ D+FE M K G D+ TYN +I++ + A+ + +E+E
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
CKPD+ +Y+ + M + L+PD+ T+S L+ K+ +++
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 500 ACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI-----EKLMTPPSIRFT 550
A S FEE++ +G P L+ LE E + ++ +TP SI +T
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYT 621
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 175/393 (44%), Gaps = 27/393 (6%)
Query: 171 NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKE 230
N++I G +++ + LV+ K + + +T +L+ ++ + A + ++
Sbjct: 175 NILIGFFGNTEDLQMCLRLVK---KWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRR 231
Query: 231 FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQ 289
G +D A NML+DAL K E A V + K + ++ I++ R+ D+
Sbjct: 232 GGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDE 288
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A + +M G +V YN+ ++ K K QV M E GC PN TY++++
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 350 ALGKAGQLSQ---ALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM---P 403
L GQL + +E+ ++ + GI YS L+ L K G + +A +F DM P
Sbjct: 349 LLVAEGQLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFP 402
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
+G RD +Y +M+ + C + A+ +L ++ E+ D Y+
Sbjct: 403 VKG-ERD--SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQIS 459
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
E M K+ SPD+ T+++L+ + G++D A + FEEL P + L+
Sbjct: 460 HIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI 519
Query: 524 KDLEAKSMLKE-----KEHIEKLMTPPSIRFTS 551
L + E KE EK + P + +++
Sbjct: 520 NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 170/400 (42%), Gaps = 43/400 (10%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
A G F T+ G + YN ++ +L K K D ++ M + YT + +L
Sbjct: 289 AVGLFNEMITE-GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IP 268
L G+ K + M + L+ L K V AH + + S +
Sbjct: 348 NLLVAEGQLVRLDGVVEISKRY---MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
S+ ++ C +A +++ + E G V D YN+ + K + +
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
E+M ++G P+ TY I++ + G+ G++ +A+ ++E+++ PD Y+SLI LGK
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
G + +A F++M ++G+ DVVTY+T++ R E A L +EM + C+P++ T
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
Y+ +L+ L K+G+ A + ++
Sbjct: 585 YN-----------------------------------ILLDCLEKNGRTAEAVDLYSKMK 609
Query: 509 SRGLTP---RHGALKQLVKDLEAKSMLKEKEHIEKLMTPP 545
+GLTP + L++L KS ++ K I + P
Sbjct: 610 QQGLTPDSITYTVLERLQSVSHGKSRIRRKNPITGWVVSP 649
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 243 LMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGF 302
++D++VK N HG N + NIL+ + N + + + +K+
Sbjct: 158 ILDSMVKSN----VHG-----------NISTVNILIGFF---GNTEDLQMCLRLVKKWDL 199
Query: 303 VPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALE 362
+ F+Y +++Y +D+ K V E+ G + Y +++ AL K +A +
Sbjct: 200 KMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQ 256
Query: 363 VYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
V+E MK D Y+ +I +G+ G+ +A +F +M +G+ +VV YNT++
Sbjct: 257 VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLA 316
Query: 423 AHSREETALRLLKEMEERSCKPDLETY 449
+ A+++ M E C+P+ TY
Sbjct: 317 KGKMVDKAIQVFSRMVETGCRPNEYTY 343
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 152/310 (49%), Gaps = 23/310 (7%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEG---YVTLYTMT 206
A FF W +T G++H+ M +L K +F +W+ + ++++ E VT ++T
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-- 264
+++ L + G ++A+A F RMKE+ D A N +++AL + + + A +L + +
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 265 -SLIPLNSGSFNILMNGWCRV-----------RNFDQARKVMEDMKEHGFVPDVFSYNSF 312
P ++ ++ IL++ +CR R +A ++ +M GFVPDV +YN
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 313 IESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK--SH 370
I+ C + ++ E+M GC PN VTY + ++ A+E+ MK H
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH 349
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETA 430
G VP + Y+ LI L + R +A D+ +M + G+V TY + A S E A
Sbjct: 350 G-VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCD---ALSSEGLA 405
Query: 431 LRLLKEMEER 440
L +E+ +R
Sbjct: 406 STLDEELHKR 415
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 161/354 (45%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
+ G + +YN+++ KS + + +L+ EM + + ++T ++ K H
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILM 278
+A++ RM+ GV + N + + + A + E K + N ++ L+
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLI 314
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+G+CR+ + D+A ++ E M+ GF P V +YNS + C D R+ +++L EMS
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+ +T ++ A K + A++V +KM G+ D Y +LI K L++A +
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
M ++G TY+ ++ ++++ +LL+E E+R D+ Y
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICK 494
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
E M K L D F+ + + ++GK+ A + F+ + +R L
Sbjct: 495 LEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRL 548
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 165/430 (38%), Gaps = 94/430 (21%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
++ FF W + +HS + MI IL K K+F +L++++A+ E L + VL
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRE----LLSSPLVL 118
Query: 210 RRLT----------------------KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL 247
R L KAG D+I F +++ G+ A +L+++L
Sbjct: 119 RSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSL 178
Query: 248 VKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
VK R D K+ + M + G V ++
Sbjct: 179 VKQ----------------------------------RLTDTVWKIFKKMVKLGVVANIH 204
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
YN + + D K +++L EM E G P+ TY ++ K +AL V ++M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVF---------------------------- 399
+ G+ P+ Y+S I + GR+++A +F
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDID 324
Query: 400 ------EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
E M +G VVTYN+++ C R A RLL EM + +PD T +
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
+ M ++ L D+ ++ L+HG K +L++A +I +G +
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 514 PRHGALKQLV 523
P + LV
Sbjct: 445 PGYATYSWLV 454
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T T ++ + ++A+ M+ G N ++ L + + A+ +L E
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 264 --KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
K + P N + N L+N +C++ + A KV + M E G D++SY + I +C +
Sbjct: 369 SGKKIEPDNI-TCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVM---FALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
+ L M E G P TY+ ++ + K ++++ LE +EK G+ D
Sbjct: 428 LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK---RGLCADVAL 484
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
Y LI + K ++ A +FE M K+G+V D V + TM + A L M
Sbjct: 485 YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMY 544
Query: 439 ERSCKPDLETY 449
R +L+ Y
Sbjct: 545 NRRLMVNLKLY 555
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +ID + + D L E M + T +LR+L + G+ +A M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFD 288
++ D N L++A K + A V + +S + L+ S+ L++G+C+V +
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A++ + M E GF P +Y+ ++ + + ++ ++LEE + G + Y ++
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ K Q+ A ++E M+ G+V D+ ++++ + + G++ +A +F+ M + ++
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLM 549
Query: 409 RDVVTYNTM 417
++ Y ++
Sbjct: 550 VNLKLYKSI 558
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 146/321 (45%), Gaps = 38/321 (11%)
Query: 136 VQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDL----VWELVE 191
+ ++L RF +D A FF W K G + Y L++ IL SK F L + EL+E
Sbjct: 82 ISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIE 141
Query: 192 EMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGN 251
+K E V R L A + D +ML+ +K
Sbjct: 142 LTSKKEE-------VDVFRVLVSATDE--------------CNWDPVVFDMLVKGYLKLG 180
Query: 252 SVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMED-------MKEHGFVP 304
VE V E L+SG F++ + + N +MED M G P
Sbjct: 181 LVEEGFRVFREV-----LDSG-FSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHP 234
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
+ +++N +C+D +FR+VD LE+M E G P+ VTY ++ + + G+L +A +Y
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 365 EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAH 424
+ M +VPD Y+SLI L K GR+++A F M +GI D ++YNT+I C
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 425 SREETALRLLKEMEERSCKPD 445
+ + +LL EM S PD
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPD 375
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 131/336 (38%), Gaps = 22/336 (6%)
Query: 190 VEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK-EFGVDMDTAALNMLMDALV 248
V+ + H GY + ++VL R AI F+ +K + G + +L+ LV
Sbjct: 70 VKSLIPHLGYPEI---SRVLLRFQSDASR--AITFFKWVKFDLGKRPNVGNYCLLLHILV 124
Query: 249 KGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFS 308
A L E LI L S + D R ++ E + P VF
Sbjct: 125 SSKKFPLAMQFLCE---LIELTS-----------KKEEVDVFRVLVSATDECNWDPVVF- 169
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
+ ++ Y + +V E+ ++G + VT ++ L K + +VY M
Sbjct: 170 -DMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
GI P+T ++ L + ++ D E M ++G D+VTYNT++S+ C R +
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 429 TALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A L K M R PDL TY M + PD +++ L+
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 489 HGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ K G + + E++ + P K +V+
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVE 384
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 130/319 (40%), Gaps = 8/319 (2%)
Query: 187 WELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDA 246
W++ M + + YT + + +M+E G + D N L+ +
Sbjct: 221 WQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 247 LVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVP 304
+ ++ A + ++ + ++P + ++ L+ G C+ +A + M + G P
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVP-DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
D SYN+ I +YC + ++ ++L EM N P+ T +++ + G+L A+
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 365 EKMKSHGIVPDTPFYSS--LIFILGKAGRLKDACDVFED-MPKQGIVRDVVTYNTMISTA 421
+++ + D PF LI L + G+ A + + + ++G TYN +I +
Sbjct: 400 VELRRLKV--DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 422 CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDL 481
E AL L +++ ++ D +TY MF +++ PD
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
Query: 482 GTFSLLVHGLRKSGKLDHA 500
LV+G K D A
Sbjct: 518 FICGALVYGYCKELDFDKA 536
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
C + V + +++ K G + + V+ ++ G + L+ L K ++D
Sbjct: 162 CNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCW 221
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
V+ M + GI + T+N + + C S L++MEE +PDL TY+
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
+ M++ + PDL T++ L+ GL K G++ A F ++ RG+ P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 517 GALKQLVKDLEAKSMLKEKEHIEKLMTPPSI---RFTS 551
+ L+ + M+++ + + M S+ RFT
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC 379
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 123/316 (38%), Gaps = 41/316 (12%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N++ ++ NF V + +E+M + L T ++ + G+ ++A ++ M
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
V D L+ L K V AH + + P + S+N L+ +C+
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP-DCMSYNTLIYAYCKEGMM 357
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCH-------------------DKDFRKVDQV 328
Q++K++ +M + VPD F+ +E + D F D +
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFL 417
Query: 329 LEEMSENGCPPNAV-----------------TYTIVMFALGKAGQLSQALEVYEKMKSHG 371
+ + + G P A TY ++ +L + + +AL + K+K+
Sbjct: 418 IVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQN 477
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
V D Y +LI L + GR ++A + +M + D ++ C + A
Sbjct: 478 QVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAE 537
Query: 432 RLLK--EMEERSCKPD 445
RLL ME R P+
Sbjct: 538 RLLSLFAMEFRIFDPE 553
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIP-LNSGSFNILMNGWCRV 284
R ++E G + N L+++L + +++E A + + K+ L++ ++ L+ CR+
Sbjct: 436 RIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRI 495
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
+A +M +M + PD F + + YC + DF K +++L + + +Y
Sbjct: 496 GRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESY 555
Query: 345 TIVMFALGKAG-QLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
++ A+ + G +ALE+ E+M+ G VP+ LI +L
Sbjct: 556 NSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 161/390 (41%), Gaps = 12/390 (3%)
Query: 118 ELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDIL 177
E +AL+ Q + V ++L+ FF+W + GY+H+ E YN+ I +
Sbjct: 629 ERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVA 688
Query: 178 GKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDT 237
G K+F + L EM + +T T ++ + + G AI F+ MK+ G+ +
Sbjct: 689 GCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSS 748
Query: 238 AALNMLMDALV--KGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKV 293
+ L+ L KG +VE A E +P + + C V N A+
Sbjct: 749 STFKCLITVLCEKKGRNVEEATRTFREMIRSGFVP-DRELVQDYLGCLCEVGNTKDAKSC 807
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE---NGCPPNAVTYTIVMFA 350
++ + + GF P +Y+ +I + C K+++ L E++ + TY ++
Sbjct: 808 LDSLGKIGF-PVTVAYSIYIRALCR---IGKLEEALSELASFEGERSLLDQYTYGSIVHG 863
Query: 351 LGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD 410
L + G L +AL+ MK G P Y+SLI K +L+ + + M +
Sbjct: 864 LLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPS 923
Query: 411 VVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXE 470
VVTY MI + + E A + MEER PD +TY
Sbjct: 924 VVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLS 983
Query: 471 HMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
M ++P F + +GL + GK D A
Sbjct: 984 EMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 184/430 (42%), Gaps = 15/430 (3%)
Query: 124 LDGHGFQVSNSSVQQILKRFNNDWVP--AFGFFTWAKTQTGYEHSPELYNLMIDILGKSK 181
L+ F+ V+ +LKR VP A FF W K + G+ H +YN M+ I G+++
Sbjct: 146 LEKLSFRFEPEIVENVLKRCFK--VPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEAR 203
Query: 182 NFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALN 241
N D+V ELV EM K+ + T T ++ KA K + F +M++ G ++D A N
Sbjct: 204 NLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYN 263
Query: 242 MLMDALVKGNSVEHAHGVLLEF-----KSLIPLNSGSFNILMNGWCRVRNFDQARKVMED 296
+++ +L + A LEF + I ++ +L++ + D + + +D
Sbjct: 264 IMIRSLCIAGRGDLA----LEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADD 319
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
M + + ++ ++S+C ++ +++ E+ +A + I++ L +A +
Sbjct: 320 MVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANR 379
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
+ ALE+ + MK + D+ Y +I + + A + FE + K G V TY
Sbjct: 380 MVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTE 438
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
++ + E L EM E +PD M +
Sbjct: 439 IMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKG 498
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKE 536
+ P ++S+ V L +S + D F ++ + + R ++ +E K+ KEK
Sbjct: 499 IKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSME-KNGEKEKI 557
Query: 537 HIEKLMTPPS 546
H+ K + S
Sbjct: 558 HLIKEIQKRS 567
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
++ GF V YN+ + ++ VD+++ EM +NGC + T+TI++ GKA ++
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
+ L V+EKM+ G D Y+ +I L AGR A + +++M ++GI + TY +
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 418 ISTACAHSREETALRLLKEMEERSCK-PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
+ + + + +M R C+ + + + + +
Sbjct: 301 LDCIAKSEKVDVVQSIADDM-VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKE 359
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH-------GALKQLVKDLEAK 529
+ D F +LV GL ++ ++ A + + R L + G L+Q +
Sbjct: 360 MCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQ----NDVS 415
Query: 530 SMLKEKEHIEKLMTPPSI 547
L++ E I+K PP +
Sbjct: 416 KALEQFEVIKKSGRPPRV 433
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 163/351 (46%), Gaps = 9/351 (2%)
Query: 103 VEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFN-NDWVPAFGFFTWAKTQT 161
V A L + + + L Q+ +S + ++L+R + N + FF WA T +
Sbjct: 30 VSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLS 89
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
+ HS +Y DIL DL+ ++E K E +V + TM VL +A ++A
Sbjct: 90 SHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEA 149
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMN 279
+ R+ EF V DT A N+++ + A ++ E L P + ++ ++N
Sbjct: 150 LWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP-DVITYTSMIN 208
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM-SENG-- 336
G+C D A ++ ++M +H V + +Y+ +E C D + ++L EM E+G
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 337 -CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI-FILGKAGRLKD 394
PNAVTYT+V+ A + ++ +AL V ++M + G +P+ LI +L +K
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKA 328
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
+ + + K G V +++ + R E A ++ + M R +PD
Sbjct: 329 LSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPD 379
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 4/194 (2%)
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
+ V+E + C N T IV+ +A +AL V K + DT Y+ +I
Sbjct: 114 IKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIR 173
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
+ G L A + ++M G+ DV+TY +MI+ C + + A RL KEM + C
Sbjct: 174 LFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVL 233
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKND----LSPDLGTFSLLVHGLRKSGKLDHA 500
+ TY M K D +SP+ T++L++ + +++ A
Sbjct: 234 NSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEA 293
Query: 501 CSFFEELISRGLTP 514
+ + +RG P
Sbjct: 294 LLVLDRMGNRGCMP 307
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 11/382 (2%)
Query: 72 IPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQV 131
I S+ +D H++ K P N + V I +++ PEL Q LD F
Sbjct: 117 IRSVEPGLDDHVMVGGLK--KPYMNASS---VAKIVEVVQRWKWGPELETQ-LDKLQFVP 170
Query: 132 SNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVE 191
+ + Q LK + A F WAK Q Y S E Y ++ D L + ++F + L E
Sbjct: 171 NMVHITQSLK-IVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFE 229
Query: 192 EMAKHE---GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
EM + G ++ +V++ L KA K E A F++ +E G +DT N LM +
Sbjct: 230 EMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFL 289
Query: 249 KGNSVEHAHGVLLEFKSLIPLNSGS-FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
A + + L GS + +++ + D A K+ + MKE P
Sbjct: 290 NKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFS 349
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
++S ++S +V EM G P+A + ++ + KAG+L AL ++++M
Sbjct: 350 VFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM 409
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
K G P+ Y+ +I K+G+L+ A VF+DM K G + TY+ ++ +
Sbjct: 410 KKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQV 469
Query: 428 ETALRLLKEMEERSCKPDLETY 449
++A+++ M +P L +Y
Sbjct: 470 DSAMKIYNSMTNAGLRPGLSSY 491
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 148/331 (44%), Gaps = 6/331 (1%)
Query: 118 ELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQ-TGYEHSPELYN-LMID 175
E + Q HG +S ++ Q+++ F + K Q +G + + YN LM+
Sbjct: 229 EEMVQDSSSHG-DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMML 287
Query: 176 ILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM 235
L K + +E+ E M K + + T ++ L K+G+ + A F++MKE +
Sbjct: 288 FLNKGLPYK-AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRP 346
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGS-FNILMNGWCRVRNFDQARKVM 294
+ + L+D++ K ++ + V +E + S + F L++ + + D A ++
Sbjct: 347 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLW 406
Query: 295 EDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKA 354
++MK+ GF P+ Y IES+ V ++M + G P TY+ ++ +
Sbjct: 407 DEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGS 466
Query: 355 GQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTY 414
GQ+ A+++Y M + G+ P Y SL+ +L + A + +M G DV
Sbjct: 467 GQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCAS 526
Query: 415 NTMISTACAHSREETALRLLKEMEERSCKPD 445
+ ++ + + AL+ L+ M K +
Sbjct: 527 DVLM-IYIKDASVDLALKWLRFMGSSGIKTN 556
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 117/264 (44%)
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
L+ ++N ++ + + A + +E G D +YN+ + + + K ++
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
E M + + TY +++ +L K+G+L A +++++MK + P +SSL+ +GK
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
AGRL + V+ +M G + ++I + + +TALRL EM++ +P+
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
Y + M K P T+S L+ SG++D A + +
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 509 SRGLTPRHGALKQLVKDLEAKSML 532
+ GL P + L+ L K ++
Sbjct: 481 NAGLRPGLSSYISLLTLLANKRLV 504
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 157/357 (43%), Gaps = 49/357 (13%)
Query: 167 PELYNL--MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAA 224
P L N +ID L K + +E++EEM ++ +YT T ++ L K G E A
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 225 FRRMKEFGVDMDTAALNM-----LMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNIL 277
F ++ V DT N+ ++ K + + A + K L P N ++ L
Sbjct: 345 FLKL----VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP-NVNTYTTL 399
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+NG C+ +F +A ++M M + GF+P++++YN+ I+S C + ++L + G
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
+ VTYTI++ K ++QAL + +M G D + LI + ++K++
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
+F+ + G++ TY +MIS C + AL+ M+ C PD TY
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS------ 573
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
L+ GL K +D AC +E +I RGL+P
Sbjct: 574 -----------------------------LISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 147/351 (41%), Gaps = 7/351 (1%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T T +L L + G AI FR+M + G + L+D L K S++ A +L E
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 264 -KSLIPLNSGSFNILMNGWCRVRNFDQA-RKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
++ N + L++G C+ ++A R ++ ++ + P+V +Y S I YC +
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ + + M E G PN TYT ++ KAG +A E+ M G +P+ Y++
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
I L K R +A ++ G+ D VTY +I C + AL M +
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
+ D+ + + + L P T++ ++ K G +D A
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553
Query: 502 SFFEELISRGLTPRHGALKQLVKDLEAKSMLKE-----KEHIEKLMTPPSI 547
+F + G P L+ L KSM+ E + I++ ++PP +
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEV 604
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 171/432 (39%), Gaps = 54/432 (12%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
A FF WA + H LY + D L + N E++ M L
Sbjct: 110 ALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCM---------------L 154
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLI 267
R ++ G+ +A+ M+ G+ + +N +++ V+ +E+A V + + ++
Sbjct: 155 RNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVV 214
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD---------------------- 305
P +S S+ +++ G R +A + + M + GF+PD
Sbjct: 215 P-DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 306 -------------VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALG 352
+ ++ S I+ C ++ ++LEEM NG PN T+T ++ L
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 353 KAGQLSQALEVYEKM-KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
K G +A ++ K+ +S P+ Y+S+I K +L A +F M +QG+ +V
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
TY T+I+ C A L+ M + P++ TY+
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSM 531
F L D T+++L+ K ++ A +FF + G L+ +
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Query: 532 LKEKEHIEKLMT 543
+KE E + +L+
Sbjct: 514 MKESERLFQLVV 525
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 150/364 (41%), Gaps = 5/364 (1%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF F Y+ + Y MI K + L M + + + T T ++
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIP 268
KAG A M + G + N +D+L K + A+ +L + F +
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
+ ++ IL+ C+ + +QA M + GF D+ N I ++C K ++ +++
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
+ + G P TYT ++ K G + AL+ + MK HG VPD+ Y SLI L K
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
+ +AC ++E M +G+ VT T+ C + A+ LL+ +++ K + T
Sbjct: 581 KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---KLWIRT 637
Query: 449 YHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
+ + + D S D T + +SGK ++ + E I
Sbjct: 638 VRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK-NNLVTDLTERI 696
Query: 509 SRGL 512
SRG+
Sbjct: 697 SRGV 700
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 146/304 (48%), Gaps = 7/304 (2%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY-VTLYTMTKV 208
A+ FF W Q + H+ Y+L++ I + + + L++EM K +GY T T +
Sbjct: 135 AYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLL 193
Query: 209 LRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV---KGNSVEHAHGVLLEFKS 265
+ +AG D + F + K F + N ++ +L+ + ++ + +LE
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLE-DG 252
Query: 266 LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKV 325
P + ++NI+M R+ D+ +++++M + GF PD+++YN +
Sbjct: 253 FTP-DVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
+L M E G P + +T ++ L +AG+L ++ G PD Y+ +I
Sbjct: 312 LNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
G L+ A ++F++M ++G + +V TYN+MI C + + A LLKEME R C P+
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 446 LETY 449
Y
Sbjct: 432 FVVY 435
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 6/246 (2%)
Query: 163 YEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
Y+HS YN ++ L K + L+ + E+M + + T V+ + GK +
Sbjct: 221 YKHS---YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGS--FNILMNG 280
M + G D N+L+ L GN A +L + + + G F L++G
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMRE-VGVEPGVIHFTTLIDG 336
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
R + + M++ + G PDV Y I Y + K +++ +EM+E G PN
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TY ++ AG+ +A + ++M+S G P+ YS+L+ L AG++ +A +V +
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVK 456
Query: 401 DMPKQG 406
DM ++G
Sbjct: 457 DMVEKG 462
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%)
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
Y+ ++ + +++ + ++++EM ++G P A T+ +++ G+AG +E + K
Sbjct: 154 CYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKS 213
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
K+ P Y++++ L + K V+E M + G DV+TYN ++ +
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
+ RLL EM + PDL TY+ HM + + P + F+ L
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
+ GL ++GKL+ F +E + G TP ++ + L++ E + K MT
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMT 389
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 1/336 (0%)
Query: 180 SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
S F+ L +MA+ ++ +++L + K K+E I+ FR ++ G+ D +
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 240 LNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
L+D + + A L + L + +F L+NG+C V F +A +++ +
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
G+ P+V YN+ I+S C VL+ M + G P+ VTY ++ L +G
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
+ + M GI PD +S+LI + GK G+L +A + +M ++ + ++VTYN++I
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 419 STACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLS 478
+ C H + A ++L + + P+ TY+ M ++ +
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 479 PDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
D T++ L G ++GK A ++S G+ P
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 3/290 (1%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
GYE + +YN +ID L + + ++++ M K + T ++ RL +G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMN 279
M G+ D + L+D K + A E +S+ P N ++N L+N
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP-NIVTYNSLIN 297
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G C D+A+KV+ + GF P+ +YN+ I YC K ++L MS +G
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
+ TY + +AG+ S A +V +M S G+ PD ++ L+ L G++ A
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
ED+ K V ++TYN +I C + E A L + + PD+ TY
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 160/382 (41%), Gaps = 1/382 (0%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G H + +ID + L + +M K ++ T ++ + +A
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
++ ++ G + + N ++D+L + V A VL K + I + ++N L+
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ + +++ DM G PDV ++++ I+ Y + + + EM + PN
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VTY ++ L G L +A +V + S G P+ Y++LI KA R+ D +
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
M + G+ D TYNT+ C + A ++L M PD+ T++
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG 408
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
E + K+ + T+++++ GL K+ K++ A F L +G++P
Sbjct: 409 KIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYI 468
Query: 521 QLVKDLEAKSMLKEKEHIEKLM 542
++ L K + +E + + M
Sbjct: 469 TMMIGLRRKRLWREAHELYRKM 490
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%)
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
F+ A + DM E +P + ++ + + + V + + G + ++T
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ + +LS AL KM G P + SL+ R +A + + + G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
+VV YNT+I + C + TAL +LK M++ +PD+ TY+
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
M + +SPD+ TFS L+ K G+L A + E+I R + P L+ L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 527 EAKSMLKEKEHIEKLMTP 544
+L E + + ++
Sbjct: 300 CIHGLLDEAKKVLNVLVS 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 3/243 (1%)
Query: 166 SPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
SP++ ++ +ID+ GK + EM + + T ++ L G ++A
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWC 282
+ G + N L++ K V+ +L + + ++ ++N L G+C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ F A KV+ M G PD++++N ++ C K LE++ ++ +
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
TY I++ L KA ++ A ++ + G+ PD Y +++ L + ++A +++ M
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 403 PKQ 405
K+
Sbjct: 491 QKE 493
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 149/310 (48%), Gaps = 13/310 (4%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
A GF W + + + H+ E + +D G+ K+F + E++ +K++G T+ +
Sbjct: 126 ALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEII---SKYKGIAGGKTLESAI 182
Query: 210 RRLTKAGKHEDAIAAFRRMK-EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIP 268
RL +AG+ + F +M+ ++G+ D +L +++ L + A ++ + I
Sbjct: 183 DRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF 242
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE---SYCHDKD-FR- 323
+ ++L++GWC D+A ++ +M GF +YN ++ C KD F+
Sbjct: 243 PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKL 302
Query: 324 --KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+V++VL EM G P N T+ +++ L K + +A+ ++ +M G PD Y
Sbjct: 303 QPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLV 362
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGI--VRDVVTYNTMISTACAHSREETALRLLKEMEE 439
LI L +A R+ + ++ + M G + + Y + C R E A+ + K M+
Sbjct: 363 LIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKA 422
Query: 440 RSCKPDLETY 449
CKP ++TY
Sbjct: 423 NGCKPGIKTY 432
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 215 AGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE-------HAHGVLLEFK-SL 266
A K ++A M G ++ T A NM++D + K + VLLE +
Sbjct: 258 AEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRG 317
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD 326
+P N+ +FN+L+N C++R ++A + M E G PD +Y I S + D
Sbjct: 318 VPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGD 377
Query: 327 QVLEEMSENGCPP--NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
+++++M G N Y + L +L A+ V++ MK++G P Y L+
Sbjct: 378 EMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMG 437
Query: 385 ILGKAGRLKDACDVFEDMPKQGIV 408
+ +L A ++++ K+GI
Sbjct: 438 KMCANNQLTRANGLYKEAAKKGIA 461
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 40/418 (9%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRR 227
YN +I K + + + + +E+ K +G++ TL T ++ K G +
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKEL-KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 228 MKEFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRN 286
+KE G+ + LN ++DA + G V+ A + + + ++NIL+N C+
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
+ A +++ + G +P+ SY I++YC K++ ++L +M+E GC P+ VTY I
Sbjct: 361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM---- 402
++ L +G + A+ + K+ G+ PD Y+ L+ L K GR A +F +M
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 403 -------------------------------PKQGIVRDVVTYNTMISTACAHSREETAL 431
++G+ DVV +N MI C + AL
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
+ M E PD TY +M KN P++ T++ L++G
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Query: 492 RKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKE--HIEKLMTPPSI 547
G A F+E+ R L P L++ L +S EK + E +MT +
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV 658
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 171/404 (42%), Gaps = 23/404 (5%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN++I+ L K ++ ++E +K + +++ K+ +++ A +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNF 287
E G D +L+ LV ++ A + ++ + + P ++ +N+LM+G C+ F
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP-DAAIYNMLMSGLCKTGRF 466
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
A+ + +M + +PD + Y + I+ + DF + +V E G + V + +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ ++G L +AL +M +VPD YS++I K + A +F M K
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
+VVTY ++I+ C + A KEM+ R P++ TY
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 468 XX-EHMFKNDLSPDLGTFSLLVHGLRK--SGKL-------DHACS-----FFEELISRGL 512
E M N P+ TF+ L+ G K SGK+ +H S FF + S G
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 513 TPRHGALKQLVKDLEAKSMLK-----EKEHIEKLMTPPSIRFTS 551
+ A + L M+K + + ++K +P + F +
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAA 750
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 155/399 (38%), Gaps = 43/399 (10%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
SP +++ + D+ K FD W E+ K E + + + L+ L + +
Sbjct: 67 SPFVFDRIQDVEIGVKLFD--WLSSEK--KDEFFSNGFACSSFLKLLARYRIFNEIEDVL 122
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLEFKSLIPLNSGSFNILMNGWC 282
++ V + AL+ ++ A + S+ A + ++E +P + + N L++
Sbjct: 123 GNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVP-DVIACNSLLSLLV 181
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ R ARKV ++M + G D +S ++ C++ +++E GC PN V
Sbjct: 182 KSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIV 241
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
Y ++ K G + A V++++K G +P + ++I K G + + ++
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV 301
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH------------ 450
++G+ V N +I H + + + CKPD+ TY+
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 451 -----------------------PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
P M + PD+ T+ +L
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+HGL SG +D A + +LI RG++P L+ L
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 18/272 (6%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+Y +ID +S +FD ++ + V + +++ ++G ++A+A RM
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRN 286
E + D + ++D VK + A + +E P N ++ L+NG+C +
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP-NVVTYTSLINGFCCQGD 605
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD-FRKVDQVLEEMSENGCPPNAVTYT 345
F A + ++M+ VP+V +Y + I S + K E M N C PN VT+
Sbjct: 606 FKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFN 665
Query: 346 IVMFALGKA--------------GQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
++ K GQ S E + +MKS G Y+S + L G
Sbjct: 666 CLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGM 725
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
+K AC + M K+G D V++ ++ C
Sbjct: 726 VKTACMFQDKMVKKGFSPDPVSFAAILHGFCV 757
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 184/414 (44%), Gaps = 9/414 (2%)
Query: 123 ALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKN 182
+L+ F +++ S ++ ++W AF F W + + + +LMI +LG +
Sbjct: 113 SLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGCDDQKS--CDLMIWVLGNHQK 170
Query: 183 FDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNM 242
F++ W L+ +M + T M ++ R A AI F M +F A
Sbjct: 171 FNIAWCLIRDMF-NVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQG 229
Query: 243 LMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRV-RNFDQARKVMEDMKEHG 301
L+ AL + +E A +L K L P++ FN+++NGWC + + +A+++ +M +
Sbjct: 230 LLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYC 289
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
P+ SY+ I + + ++ +EM + G P Y +++ L + +A+
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
++ +K+ G+ PD+ Y+S+I L +AG+L A +V M + + V T++ +
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409
Query: 422 CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDL 481
E L +L +M+ P ET+ M + ++ +
Sbjct: 410 ----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANP 465
Query: 482 GTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEK 535
+ + GL G L+ A + E+ S+G + L++L+++ + K + K K
Sbjct: 466 ALYLATIQGLLSCGWLEKAREIYSEMKSKGFVG-NPMLQKLLEEQKVKGVRKSK 518
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 170/371 (45%), Gaps = 15/371 (4%)
Query: 156 WAKTQTGYEHS--PE-LYNLMIDILGKSKNFDLVWELVEEMAKHEGYV---TLYTMTKVL 209
W Q Y+ PE ++N++ IL S D + L E + + + + L + ++
Sbjct: 71 WFSDQKDYDQKEDPEAIFNVLDYILKSS--LDRLASLRESVCQTKSFDYDDCLSIHSSIM 128
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL 269
R L GK + A+ ++M GV N L++ L K +E A G++ E + + P
Sbjct: 129 RDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPS 188
Query: 270 -NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH-----DKDFR 323
N S+N L+ G C V N D+A + M ++G P+ + N + + C + + +
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
++++L+ N P + V TI+M + K G + QALEV+++M + D+ Y+ +I
Sbjct: 249 LLEEILDSSQANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
L +G + A DM K+G+ DV TYNT+IS C + + A L M+
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
PD +Y M K+ L P++ +++++ G + G A S
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 504 FEELISRGLTP 514
++S G+ P
Sbjct: 428 LNLMLSYGVKP 438
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 40/320 (12%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAG----KHEDAIAAF 225
YN +I L N D L M K+ T ++ L + G ++ +
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRV 284
+ +D +LMD+ K +V A V E + +P +S +N+++ G C
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSS 313
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
N A M DM + G PDVF+YN+ I + C + F + + M G P+ ++Y
Sbjct: 314 GNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISY 373
Query: 345 TIVMFAL-----------------------------------GKAGQLSQALEVYEKMKS 369
+++ L G+ G S AL V M S
Sbjct: 374 KVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS 433
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREET 429
+G+ P+ ++LI K GRL DA V +M I D TYN ++ AC
Sbjct: 434 YGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRL 493
Query: 430 ALRLLKEMEERSCKPDLETY 449
A +L EM R C+PD+ TY
Sbjct: 494 AFQLYDEMLRRGCQPDIITY 513
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 4/254 (1%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
+M C D A + + M G +P + ++N + C K D ++ EM E G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL---- 392
PN V+Y ++ L + +AL ++ M +GI P+ + ++ L + G +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPX 452
K + D + D+V ++ + + AL + KEM +++ D Y+
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 453 XXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
M K ++PD+ T++ L+ L K GK D AC + + G+
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 513 TPRHGALKQLVKDL 526
P + K +++ L
Sbjct: 367 APDQISYKVIIQGL 380
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+YN++I L S N + + +M K ++T ++ L K GK ++A M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGS-----FNILMNGWCR 283
+ GV D + +++ L V A+ EF + +S +N++++G+ R
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRAN----EFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ--VLEEMSENGCPPNA 341
+ A V+ M +G P+V++ N+ I Y K R +D V EM P+
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV--KGGRLIDAWWVKNEMRSTKIHPDT 475
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
TY +++ A G L A ++Y++M G PD Y+ L+ L GRLK A +
Sbjct: 476 TTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSR 535
Query: 402 MPKQGIVRDVVTY 414
+ GI D V +
Sbjct: 536 IQATGITIDHVPF 548
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSG 272
+ G A++ M +GV + N L+ VKG + A V E +S I ++
Sbjct: 417 RYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTT 476
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
++N+L+ C + + A ++ ++M G PD+ +Y + C +K + +L +
Sbjct: 477 TYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
G + V + I+ + + +A VY+K
Sbjct: 537 QATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 1/323 (0%)
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNIL 277
+DA+ +M++ G+ D +L+D L K V A VL K I N +++ L
Sbjct: 30 KDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSL 89
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+ G C+ A + + +M P+V ++++ I++Y KVD V + M +
Sbjct: 90 ITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 149
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
PN TY+ +++ L ++ +A+++ + M S G P+ YS+L K+ R+ D
Sbjct: 150 DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIK 209
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
+ +DMP++G+ + V+ NT+I + + AL + M P++ +Y+
Sbjct: 210 LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLF 269
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHG 517
EHM K D+ T+++++HG+ K+ + A F +L + + P
Sbjct: 270 ANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFK 329
Query: 518 ALKQLVKDLEAKSMLKEKEHIEK 540
A ++ +L M E + + +
Sbjct: 330 AYTIMIAELNRAGMRTEADALNR 352
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 4/268 (1%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L+NG+C + A V M++ G DV I++ C ++ +VL+ M + G
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
PN VTY+ ++ L K+G+L+ A +M S I P+ +S+LI K G+L
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
V++ M + I +V TY+++I C H+R + A+++L M + C P++ TY
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR- 515
+ M + ++ + + + L+ G ++GK+D A F + S GL P
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 516 ---HGALKQLVKDLEAKSMLKEKEHIEK 540
+ L L + E + L EH++K
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQK 286
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 138/282 (48%), Gaps = 1/282 (0%)
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVR 285
+M + G++ D + L++ NS++ A V + + + I + IL++ C+ R
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
A +V++ MK+ G P+V +Y+S I C ++ L EM PN +T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++ A K G+LS+ VY+ M I P+ YSSLI+ L R+ +A + + M +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G +VVTY+T+ + SR + ++LL +M +R + + +
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+M N L P++ ++++++ GL +G+++ A S FE +
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 148/337 (43%), Gaps = 20/337 (5%)
Query: 117 PELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDI 176
P++V + +GF +SNS + + + G + + ++ID
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAV-------------YVAGQMEKMGIKRDVVVDTILIDT 57
Query: 177 LGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMD 236
L K++ E+++ M + T + ++ L K+G+ DA M ++ +
Sbjct: 58 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117
Query: 237 TAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL----NSGSFNILMNGWCRVRNFDQARK 292
+ L+DA K + V +K +I + N +++ L+ G C D+A K
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSV---YKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 174
Query: 293 VMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALG 352
+++ M G P+V +Y++ + ++L++M + G N V+ ++
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 353 KAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV 412
+AG++ AL V+ M S+G++P+ Y+ ++ L G ++ A FE M K D++
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
TY MI C + A L +++ + +PD + Y
Sbjct: 295 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 4/278 (1%)
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
N VPA K + G + Y+ +I L KS + EM + +
Sbjct: 61 NRLVVPALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--L 261
T + ++ K GK + ++ M + +D + + L+ L N V+ A +L +
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
K P N +++ L NG+ + D K+++DM + G + S N+ I+ Y
Sbjct: 180 ISKGCTP-NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
V M+ NG PN +Y IV+ L G++ +AL +E M+ D Y+
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIS 419
+I + KA +K+A D+F + + + D Y MI+
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 178 GKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDT 237
GK D V++++ +M+ ++T + ++ L + ++AI M G +
Sbjct: 132 GKLSKVDSVYKMMIQMSIDP---NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 188
Query: 238 AALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMED 296
+ L + K + V+ +L + + + N+ S N L+ G+ + D A V
Sbjct: 189 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
M +G +P++ SYN + + + K E M + + +TYTI++ + KA
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 308
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
+ +A +++ K+K + PD Y+ +I L +AG +A
Sbjct: 309 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 169/384 (44%), Gaps = 37/384 (9%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
++ + ++ K G+ AI+ R + +DT N ++ L + + A+ L
Sbjct: 129 VFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLS 185
Query: 262 EFKSLIPL-NSGSFNILMNGWCRVRNFDQARKVME------------------------- 295
E + L ++ S+N L++G+C+V NF +A+ +++
Sbjct: 186 EMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE 245
Query: 296 ---DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALG 352
DM GF PDV +++S I C + +L EM E PN VTYT ++ +L
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 353 KAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV 412
KA AL +Y +M GI D Y+ L+ L KAG L++A F+ + + V +VV
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
TY ++ C +A ++ +M E+S P++ TY M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSML 532
++ P+ T+ ++ GL K+GK + A +E+ G+ + L LV L+ +
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 533 KE-----KEHIEKLMTPPSIRFTS 551
KE K+ + K +T I +TS
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTS 509
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 171/364 (46%), Gaps = 9/364 (2%)
Query: 178 GKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDT 237
GK L+ +EEM+ + +VT T ++ L KA + A+A + +M G+ +D
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTY---TTLVDSLFKANIYRHALALYSQMVVRGIPVDL 329
Query: 238 AALNMLMDALVKGNSVEHAHG---VLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVM 294
+LMD L K + A +LLE + +P N ++ L++G C+ + A ++
Sbjct: 330 VVYTVLMDGLFKAGDLREAEKTFKMLLE-DNQVP-NVVTYTALVDGLCKAGDLSSAEFII 387
Query: 295 EDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKA 354
M E +P+V +Y+S I Y + +L +M + PN TY V+ L KA
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447
Query: 355 GQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTY 414
G+ A+E+ ++M+ G+ + +L+ L + GR+K+ + +DM +G+ D + Y
Sbjct: 448 GKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 507
Query: 415 NTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFK 474
++I EE AL +EM+ER D+ +Y+ + M +
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN-VLISGMLKFGKVGADWAYKGMRE 566
Query: 475 NDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+ PD+ TF+++++ RK G + ++++ S G+ P + +V L ++E
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 535 KEHI 538
HI
Sbjct: 627 AIHI 630
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 5/293 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G E +N+M++ K + + + +L ++M +L + V+ L + GK E
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME 625
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVK---GNSVEHAHGVLLEFKSLIPLNSGSFNI 276
+AI +M + + + +D K +++ H LL + I L+ +N
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG--IKLSRQVYNT 683
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L+ C++ +A VM DM+ GF+PD ++NS + Y RK M E G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
PN TY ++ L AG + + + +MKS G+ PD Y++LI K G +K +
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
++ +M G+V TYN +IS + A LLKEM +R P+ TY
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 9/317 (2%)
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNIL 277
H+ + +M GV D ALN+L+ + K + A +L +I +++ ++N +
Sbjct: 110 HDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN--RVISIDTVTYNTV 167
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
++G C D+A + + +M + G +PD SYN+ I+ +C +F + +++E+SE
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE--- 224
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
N +T+TI+ L L E Y M G PD +SS+I L K G++ +
Sbjct: 225 -LNLITHTIL---LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
+ +M + + + VTY T++ + + AL L +M R DL Y
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHG 517
+ + +++ P++ T++ LV GL K+G L A +++ + + P
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 518 ALKQLVKDLEAKSMLKE 534
++ K ML+E
Sbjct: 401 TYSSMINGYVKKGMLEE 417
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 164/382 (42%), Gaps = 11/382 (2%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G E + + + +++ L + V LV++M + T ++ K G E A
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSV--EHAHGVLLEFKSLIPLNSGSFNILMN 279
+A M+E G+ D + N+L+ ++K V + A+ + E K + P + +FNI+MN
Sbjct: 524 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMRE-KGIEP-DIATFNIMMN 581
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
+ + + K+ + MK G P + S N + C + + +L +M P
Sbjct: 582 SQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHP 641
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
N TY I + K + + +E + S+GI Y++LI L K G K A V
Sbjct: 642 NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVM 701
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
DM +G + D VT+N+++ S AL M E P++ TY+
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGAL 519
M + PD T++ L+ G K G + + + + E+I+ GL P+
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTY 821
Query: 520 KQLV-------KDLEAKSMLKE 534
L+ K L+A+ +LKE
Sbjct: 822 NVLISEFANVGKMLQARELLKE 843
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 6/216 (2%)
Query: 212 LTKAGKHEDAIAAFRR---MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSL 266
L + KH+ A A F+ + +G+ + N L+ L K + A V+ +E +
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD 326
IP ++ +FN LM+G+ + +A M E G P+V +YN+ I ++VD
Sbjct: 710 IP-DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
+ L EM G P+ TY ++ K G + ++ +Y +M + G+VP T Y+ LI
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 387 GKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
G++ A ++ ++M K+G+ + TY TMIS C
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 167/387 (43%), Gaps = 44/387 (11%)
Query: 132 SNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVE 191
S + VQ+++ +D + A F +A Q + HS + ++I LG+ + F+L+ ++
Sbjct: 50 SPTRVQKLIAS-QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDV-- 106
Query: 192 EMAKHE--GY-VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
+AKH GY +T T +++ +A E ++ F +M EF LN ++D LV
Sbjct: 107 -LAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 249 KGNSVEHAHGVLLEFKSL--IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
L + L + N+ S+N+LM +C + A ++ M E VPDV
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
SY I+ +C ++L++M G P+ ++YT ++ +L + QL +A ++ +
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
MK G PD Y+++I + R DA V +DM G + V+Y T+I C
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ + L+EM + SP +
Sbjct: 346 FDEGKKYLEEMISKG-----------------------------------FSPHFSVSNC 370
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLT 513
LV G GK++ AC E ++ G T
Sbjct: 371 LVKGFCSFGKVEEACDVVEVVMKNGET 397
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 1/258 (0%)
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC-HDKDFRKVD 326
PL F L+ + + ++ M E F P N ++ H +K
Sbjct: 116 PLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAF 175
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
++ + +G PN +Y ++M A LS A +++ KM +VPD Y LI
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 387 GKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDL 446
+ G++ A ++ +DM +G V D ++Y T++++ C ++ A +LL M+ + C PDL
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL 295
Query: 447 ETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE 506
Y+ + M N SP+ ++ L+ GL G D + EE
Sbjct: 296 VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEE 355
Query: 507 LISRGLTPRHGALKQLVK 524
+IS+G +P LVK
Sbjct: 356 MISKGFSPHFSVSNCLVK 373
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 155/354 (43%), Gaps = 48/354 (13%)
Query: 139 ILKRF--NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH 196
IL+ F + W F W + Q G + S Y+ I +G +KN E+ + +
Sbjct: 104 ILRDFGISGRWQDLIQLFEWMQ-QHG-KISVSTYSSCIKFVG-AKNVSKALEIYQSIPDE 160
Query: 197 EGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA 256
+ +Y +L L K GK + I F +MK G+ D N L+ +K V++
Sbjct: 161 STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIK---VKNG 217
Query: 257 HGVLLEFKSLIPLNSGSFNILMNG----WCRVRN-FDQARKVMEDMKEHGFVPDVFSYNS 311
+ +E +P N + +M G C ++A ++ MK G P+++ Y+S
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 312 FIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
+ SY D++K D+++ EM G PN V T ++ K G ++ E+ +++S G
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 337
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD--------------------- 410
+ Y L+ L KAG+L++A +F+DM +G+ D
Sbjct: 338 YAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAK 397
Query: 411 --------------VVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+V NTM+ C E+ +R++K+M+E++ PD T+H
Sbjct: 398 ELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFH 451
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 138/340 (40%), Gaps = 49/340 (14%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFG-VDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL 266
+LR +G+ +D I F M++ G + + T + + V +V A LE
Sbjct: 104 ILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCI---KFVGAKNVSKA----LEIYQS 156
Query: 267 IPLNSGSFNILMNGW---CRVRN--FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
IP S N+ + C V+N D K+ + MK G PDV +YN+ + K+
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN 216
Query: 322 -FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ K +++ E+ NG ++V Y V+ G+ +A ++MK G P+ YS
Sbjct: 217 GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYS 276
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
SL+ G K A ++ +M G+V + V T++ + + LL E+E
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA 336
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
+ + P + +L+ GL K+GKL+ A
Sbjct: 337 G-------------------------------YAENEMP----YCMLMDGLSKAGKLEEA 361
Query: 501 CSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEK 540
S F+++ +G+ A ++ L KE + + +
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSR 401
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 98/224 (43%), Gaps = 3/224 (1%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHED 220
G + +Y ++ I + + +++M K EG+ +Y + +L + G ++
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQM-KVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMN 279
A MK G+ + + L+ +KG + + +L E +S N + +LM+
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G + ++AR + +DMK G D ++ + I + C K F++ ++ +
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKC 410
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ V ++ A +AG++ + + +KM + PD + LI
Sbjct: 411 DLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 13/263 (4%)
Query: 292 KVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
++ E M++HG + V +Y+S I+ + K+ K ++ + + + N ++ L
Sbjct: 119 QLFEWMQQHGKI-SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCL 176
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK------DACDVFEDMPKQ 405
K G+L ++++++MK G+ PD Y++L+ AG +K A ++ ++P
Sbjct: 177 VKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL-----AGCIKVKNGYPKAIELIGELPHN 231
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
GI D V Y T+++ ++ R E A +++M+ P++ Y
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKD 525
M L P+ + L+ K G D + EL S G L+
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDG 351
Query: 526 LEAKSMLKEKEHIEKLMTPPSIR 548
L L+E I M +R
Sbjct: 352 LSKAGKLEEARSIFDDMKGKGVR 374
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 17/241 (7%)
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYV---TLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
++ + K FD EL+ E+ + GY Y M ++ L+KAGK E+A + F MK
Sbjct: 313 LLKVYIKGGLFDRSRELLSEL-ESAGYAENEMPYCM--LMDGLSKAGKLEEARSIFDDMK 369
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGV------LLEFKSLIPLNSGSFNILMNGWCR 283
GV D A ++++ AL + + A + E L+ LN+ ++ +CR
Sbjct: 370 GKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNT-----MLCAYCR 424
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
+ ++M+ M E PD +++ I+ + +K Q +M G
Sbjct: 425 AGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEEL 484
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
+ +++ LGK ++A VY ++ + ++ IL + LKDA V +D
Sbjct: 485 CSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKDNA 544
Query: 404 K 404
K
Sbjct: 545 K 545
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 161/398 (40%), Gaps = 38/398 (9%)
Query: 146 DWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTM 205
+W FF W K+++ + YN+ + L + F L+ E+ EM K + T
Sbjct: 165 EWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITY 224
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
+ ++ + + AI F RM + G+ D + ++D K VE
Sbjct: 225 STIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVE----------- 273
Query: 266 LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKV 325
+ + E G+ PD +++ + + D+ +
Sbjct: 274 -----------------------EVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGI 310
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
VL+EM PN V Y ++ A+G+AG+ A ++ +M G+ P+ ++L+ I
Sbjct: 311 RYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKI 370
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER-SCKP 444
GKA +DA ++E+M + D + YNT+++ EE A RL +M+E C+P
Sbjct: 371 YGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRP 430
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
D +Y E M K + ++ + LV L K+ ++D F
Sbjct: 431 DNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVF 490
Query: 505 EELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
+ I RG+ P L L ++ + E EK+M
Sbjct: 491 DLSIKRGVKPDDRLCGCL---LSVMALCESSEDAEKVM 525
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 40/334 (11%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
+ T T ++ L G+ A+A RM E G +++ L K E A +L
Sbjct: 10 VVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGDTESALNLLS 65
Query: 262 EFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
+ + I + +N +++ C+ + A+ + +M + G PDV +Y+ I+S+C
Sbjct: 66 KMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ +Q+L +M E P+ VT++ ++ AL K G++S+A E+Y M GI P T Y+
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
S+I K RL DA + + M + DVVT++T+I+ C R + + + EM R
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
+ TY + L+HG + G LD A
Sbjct: 246 GIVANTVTY-----------------------------------TTLIHGFCQVGDLDAA 270
Query: 501 CSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+IS G+ P + + ++ L +K L++
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
Query: 165 HSPELYNLMIDILGKSKNFDLVWELVEEMAKH--EGYVTLYTMTKVLRRLTKAGKHEDAI 222
H P Y +I+ L K + + L+ +M + + +V +Y ++ RL K G H A
Sbjct: 41 HQP--YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYN--AIIDRLCKDGHHIHAQ 96
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGW 281
F M + G+ D + ++D+ + A +L + + I + +F+ L+N
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
+ +A ++ DM G P +YNS I+ +C ++L+ M+ C P+
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
VT++ ++ KA ++ +E++ +M GIV +T Y++LI + G L A D+
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
M G+ + +T+ +M+++ C+ A +L+++++
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M E GC P+ VT+T +M L G++ QAL + ++M G P Y ++I L K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
+ A ++ M + I VV YN +I C A L EM ++ PD+ TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
M + ++PD+ TFS L++ L K GK+ A + +++ RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 512 LTP 514
+ P
Sbjct: 177 IFP 179
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
M E G PDV ++ + + C + + +++ M E G P Y ++ L K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
AL + KM+ I Y+++I L K G A ++F +M +GI DV+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
MI + C R A +LL++M ER PD+ T+ M +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ P T++ ++ G K +L+ A + + S+ +P
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
++ +I+ L K E+ +M + + T T ++ K + DA M
Sbjct: 149 FSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMA 208
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
D + L++ K V++ + E + I N+ ++ L++G+C+V + D
Sbjct: 209 SKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 268
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
A+ ++ M G P+ ++ S + S C K+ RK +LE++ ++
Sbjct: 269 AAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 164/391 (41%), Gaps = 36/391 (9%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y ++I L + + + ++ K ++ T + ++ K G A + M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFD 288
+ G D +L+D L K + HA ++ I LN FN L++GWCR+ FD
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A KV M +G PDV ++ + + + + + M + G P+A+ Y ++
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A K + + L++++ M+ + I D + +I +L K R++DA F ++ + +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 409 RDVVTYNTMISTACAHSR-----------------------------------EETALRL 433
D+VTYNTMI C+ R + A+R+
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
M E+ KP+ TY E M + +SP + ++S+++ GL K
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 494 SGKLDHACSFFEELISRGLTPRHGALKQLVK 524
G++D A + F + I L P A L++
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 176/433 (40%), Gaps = 13/433 (3%)
Query: 120 VAQALDGH------GFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLM 173
V +ALD H GF+V S ++LK + D + G + + +
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 174 IDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGV 233
I+ K D ++L + M + L + ++ KAG F + GV
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 234 DMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL----IPLNSGSFNILMNGWCRVRNFDQ 289
+D + +D VK + A V +K + I N ++ IL+ G C+ +
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVV---YKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A + + + G P + +Y+S I+ +C + R + E+M + G PP+ V Y +++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
L K G + A+ KM I + ++SLI + R +A VF M GI
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
DV T+ T++ + R E AL L M + +PD Y
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAK 529
+ M +N +S D+ ++++H L K +++ A FF LI + P ++ +
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 530 SMLKEKEHIEKLM 542
L E E I +L+
Sbjct: 650 RRLDEAERIFELL 662
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 136/325 (41%), Gaps = 42/325 (12%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
++N +ID + FD ++ M + + T T V+R G+ E+A+ F RM
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 229 KEFGVDMDTAALNMLMDALVK-------------------------GNSVEH----AHGV 259
+ G++ D A L+DA K N V H H +
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 260 LLEFKSLIPLNSG-------SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSF 312
K L G ++N ++ G+C +R D+A ++ E +K F P+ +
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 313 IESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGI 372
I C + D ++ M+E G PNAVTY +M K+ + + +++E+M+ GI
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 373 VPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALR 432
P YS +I L K GR+ +A ++F ++ DVV Y +I C R A
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 433 LLKEMEERSCKPD------LETYHP 451
L + M KPD L Y+P
Sbjct: 798 LYEHMLRNGVKPDDLLQRALSEYNP 822
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 140/296 (47%), Gaps = 2/296 (0%)
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNILMN 279
A + F M E G++ + ++L+D K ++A V+ + S N +N ++N
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 280 GWCRVRNFDQARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
G C+V +A+++++++ KE + SYNS I+ + D + EMSENG
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN VT+T ++ K+ ++ ALE+ +MKS + D P Y +LI K +K A +
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
F ++P+ G++ +V YN++IS + + A+ L K+M DL TY
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ + PD +LV+GL K G+ A EE+ + +TP
Sbjct: 743 DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
Query: 260 LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
++E K + P N +N +M CR++N D AR + +M E G P+ F+Y+ I+ + +
Sbjct: 474 MMEQKGIEP-NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM-KSHGIVPDTPF 378
KD + V+ +M+ + N V Y ++ L K GQ S+A E+ + + K
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
Y+S+I K G A + + +M + G +VVT+ ++I+ C +R + AL + EM+
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
K DL Y + + L P++ ++ L+ G R GK+D
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 499 HACSFFEELISRGLT 513
A ++++++ G++
Sbjct: 713 AAIDLYKKMVNDGIS 727
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 147/333 (44%), Gaps = 2/333 (0%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G E + Y+++ID K+K+ W+++ +M ++ L K G+
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 220 DAIAAFRRM-KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNIL 277
A + + KE M + N ++D VK + A E ++ N +F L
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+NG+C+ D A ++ +MK D+ +Y + I+ +C D + + E+ E G
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
PN Y ++ G++ A+++Y+KM + GI D Y+++I L K G + A D
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD 751
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
++ ++ GIV D + + +++ + A ++L+EM+++ P++ Y
Sbjct: 752 LYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHH 811
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHG 490
+ M + + D F+LLV G
Sbjct: 812 REGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 184/483 (38%), Gaps = 59/483 (12%)
Query: 75 LAHWVDAHILDAKPKLVTPTFNENKH---DYVEAISTLLKEHHSS-----PELVAQALDG 126
L +++ + ++ + + P N+++ E ISTL H +S P +
Sbjct: 16 LHRFINPKPISSQTRFLHPPDNQSRDISDSTTETISTLEFPHKTSVPNHSPLTSTSETEN 75
Query: 127 HGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDIL-------GK 179
H V ++ V ++L ND V A + W K +++ ++I IL +
Sbjct: 76 H---VDDARVIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDR 132
Query: 180 SKNF--------------DLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
+ N +V LV+ + +T +L + + + A+ F
Sbjct: 133 ASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCF 192
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNI----LMNGW 281
M + V +N ++ +LV+ N ++ A + + ++ + N+ LM
Sbjct: 193 GLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEI---YNKMVLIGVAGDNVTTQLLMRAS 249
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM-SENGCPPN 340
R R ++A K+ + G PD ++ +++ C D +L EM + G P +
Sbjct: 250 LRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPAS 309
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TYT V+ A K G + +A+ V ++M GI +SL+ K L A D+F
Sbjct: 310 QETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
M ++G+ D V ++ M+ C + E A+ M+ P H
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLR---------KSGKLDHACSFFEELISRG 511
F+ S + HG K GK+D A SF + + +G
Sbjct: 430 SPEAALEIFNDSFE----------SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG 479
Query: 512 LTP 514
+ P
Sbjct: 480 IEP 482
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 158/381 (41%), Gaps = 61/381 (16%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T +L+ K G EDA F ++E + N+ + LV+ A VL +
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 264 --KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
K + P + S+NILM+G C++ A+ ++ MK +G PD +Y + YC
Sbjct: 353 TDKGIGP-SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+L+EM N C PNA T I++ +L K G++S+A E+ KM G DT +
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 382 LIFILGKAGRLKDACDVFEDMPKQG-----------------------IVRDVVTYNTMI 418
++ L +G L A ++ + M G + D++TY+T++
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 419 STACAHSR-----------------------------------EETALRLLKEMEERSCK 443
+ C R +A R+LK+ME++ C
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
LETY+ + M + +SP++ T++ + L + K++ A +
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651
Query: 504 FEELISRGLTPRHGALKQLVK 524
+E++ + + P + K L++
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIE 672
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 170/384 (44%), Gaps = 12/384 (3%)
Query: 171 NLMIDILGKSKNFDLVWELVEEM----AKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFR 226
+L+ +L + N L W + + + ++ ++L + R L +A HE+
Sbjct: 4 SLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHN 63
Query: 227 RMKEFGVD-MDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGS---FNILMNGWC 282
+ + ++L ++ K N ++ A +S P N S +N+L+
Sbjct: 64 LILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCI 123
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ R + + +DM G P +++N I + C ++ +EM E GC PN
Sbjct: 124 KERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF 183
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
T+ I++ KAG + LE+ M+S G++P+ Y++++ + GR D+ + E M
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC----KPDLETYHPXXXXXXX 458
++G+V D+VT+N+ IS C + A R+ +ME +P+ TY+
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGA 518
E + +ND L ++++ + GL + GK A + +++ +G+ P +
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 519 LKQLVKDLEAKSMLKEKEHIEKLM 542
L+ L ML + + I LM
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLM 387
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
++Y +L K + E ++ M G+ T N+L+ AL + V+ A +
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 261 LEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
E K P N +F IL+ G+C+ D+ +++ M+ G +P+ YN+ + S+C
Sbjct: 171 DEMPEKGCKP-NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV----P 374
+ ++++E+M E G P+ VT+ + AL K G++ A ++ M+ + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 375 DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
++ Y+ ++ K G L+DA +FE + + + + +YN + H + A +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 435 KEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKS 494
K+M ++ P + +Y+ M +N + PD T+ L+HG
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 495 GKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
GK+D A S +E++ P L+ L + E E + + M
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 155/353 (43%), Gaps = 18/353 (5%)
Query: 184 DLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNML 243
D L++EM ++ YT +L L K G+ +A R+M E G +DT N++
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 244 MDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFV 303
+D L ++ A ++ K + S + L N + + V + + E+ +
Sbjct: 473 VDGLCGSGELDKAIEIV---KGMRVHGSAALGNLGNSYIGL--------VDDSLIENNCL 521
Query: 304 PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV 363
PD+ +Y++ + C F + + EM P++V Y I + K G++S A V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 364 YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
+ M+ G Y+SLI LG ++ + + ++M ++GI ++ TYNT I C
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 424 HSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLS---PD 480
+ E A LL EM +++ P++ ++ + +F+ +S
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFK----YLIEAFCKVPDFDMAQEVFETAVSICGQK 697
Query: 481 LGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLK 533
G +SL+ + L +G+L A E ++ RG K LV+ L K L+
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELE 750
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 154/390 (39%), Gaps = 63/390 (16%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV-----LLE 262
++ + G+++D+ +M+E G+ D N + AL K V A + L E
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
+ L NS ++N+++ G+C+V + A+ + E ++E+ + + SYN +++ F
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
+ + VL++M++ G P+ +Y I+M L K G LS A + MK +G+ PD Y L
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 383 IF-----------------------------------ILGKAGRLKDACDVFEDMPKQGI 407
+ L K GR+ +A ++ M ++G
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEME-----------------------ERSCKP 444
D VT N ++ C + A+ ++K M E +C P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
DL TY M L PD +++ +H K GK+ A
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 505 EELISRGLTPRHGALKQLVKDLEAKSMLKE 534
+++ +G L+ L K+ + E
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 5/351 (1%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
S LYNL+++ K + + V L ++M YT ++R L + + A F
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL-NSGSFNILMNGWCRV 284
M E G + +L+ K + +L +S L N +N +++ +CR
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN---GCP-PN 340
D + K++E M+E G VPD+ ++NS I + C + ++ +M + G P PN
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPN 290
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
++TY +++ K G L A ++E ++ + + Y+ + L + G+ +A V +
Sbjct: 291 SITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLK 350
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
M +GI + +YN ++ C A ++ M+ PD TY
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
+ M +N+ P+ T ++L+H L K G++ A ++ +G
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 124/308 (40%), Gaps = 27/308 (8%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH---------EGYVTLY------ 203
+ GY N+++D L S D E+V+ M H Y+ L
Sbjct: 458 NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIE 517
Query: 204 --------TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEH 255
T + +L L KAG+ +A F M + D+ A N+ + K +
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 256 AHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE 314
A VL + K + ++N L+ G + +M++MKE G P++ +YN+ I+
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 315 SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP 374
C + +L+EM + PN ++ ++ A K A EV+E S I
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS--ICG 695
Query: 375 DTPFYSSLIFI-LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
SL+F L AG+L A ++ E + +G Y ++ + C E A +
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 434 LKEMEERS 441
L +M +R
Sbjct: 756 LHKMIDRG 763
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 102/280 (36%), Gaps = 37/280 (13%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ +++ L K+ F L EM + + K GK A + M+
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
+ G N L+ L N + HG++ E K I N ++N + C +
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A ++++M + P+VFS+ IE++C DF +V E + + C Y+++
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE-TAVSICGQKEGLYSLMF 705
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL-------------------------- 382
L AGQL +A E+ E + G T Y L
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765
Query: 383 ---------IFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
I LGK G K+A + M + V +V
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G S E YN +I LG + L++EM + + T ++ L + K E
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMN 279
DA M + + + + L++A K + A V S+ G ++++ N
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
+A +++E + + GF F Y +ES C + +L +M + G
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKM 367
+ V+ LGK G +A +KM
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSFADKM 794
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 136/280 (48%), Gaps = 2/280 (0%)
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRN 286
M G++ D ++ + +L + V+ A ++ E + P ++ ++N L+ C+ ++
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 287 FDQARKVMEDMKEHGFV-PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+ +++M++ V PD+ S+ I++ C+ K+ R+ ++ ++ G P+ Y
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+M + S+A+ VY+KMK G+ PD Y++LIF L KAGR+++A + M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
G D TY ++++ C AL LL+EME R C P+ TY+
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
E M + + + ++ LV L KSGK+ A F+
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 164 EHSPE---LYNLMIDILGKSKNFDLVWELVEEMAKH-EGYVTLYTMTKVLRRLTKAGKHE 219
+HSP YN ++ L K K+ +V+E V+EM + L + T ++ + +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILM 278
+A+ ++ G D N +M + A GV + K + + ++N L+
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
G + ++AR ++ M + G+ PD +Y S + C + +LEEM GC
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN TY ++ L KA + + +E+YE MKS G+ ++ Y++L+ L K+G++ +A +V
Sbjct: 368 PNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
F D + +S A A+S ET L+ LK+ +E+ P
Sbjct: 428 F----------DYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLVP 463
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 3/282 (1%)
Query: 273 SFNILMNGWCRV--RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
+F IL++ CR + +V+ M +G PD + + + S C + +++
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH-GIVPDTPFYSSLIFILGKA 389
E++E PP+ TY ++ L K L E ++M+ + PD ++ LI + +
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
L++A + + G D YNT++ C S+ A+ + K+M+E +PD TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ + M PD T++ L++G+ + G+ A S EE+ +
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 510 RGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIRFTS 551
RG P L+ L ++ + + ++M ++ S
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 121/284 (42%), Gaps = 12/284 (4%)
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM--KEHGFVPDVFSYNSFIESYCH--DK 320
S IPL+ N ++ + + + K+ + + + F P ++ + C D
Sbjct: 79 SRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS 138
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
V +VL M NG P+ VT I + +L + G++ +A ++ +++ PDT Y+
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVR-DVVTYNTMISTACAHSREETALRLLKEMEE 439
L+ L K L + ++M V+ D+V++ +I C A+ L+ ++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
KPD Y+ + M + + PD T++ L+ GL K+G+++
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Query: 500 ACSFFEELISRGLTPRHGALKQLV-------KDLEAKSMLKEKE 536
A + + ++ G P L+ + L A S+L+E E
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME 362
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 9/361 (2%)
Query: 170 YNLMIDILGK----SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
+N++I L K S+ DL + E+ A E + T T ++ + G+ E+ A F
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRA--ECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCR 283
M G+ + + N LM A A VL + K +IP + S+ L+N + R
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP-DVVSYTCLLNSYGR 402
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
R +A++V M++ P+V +YN+ I++Y + + ++ +M ++G PN V+
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
++ A ++ + V +S GI +T Y+S I A L+ A +++ M
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
K+ + D VT+ +IS +C S+ A+ LKEME+ S E Y
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 582
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
M PD+ ++ ++H S K AC F E+ + G+ P A L+
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Query: 524 K 524
+
Sbjct: 643 R 643
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 166/384 (43%), Gaps = 50/384 (13%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA----LNMLMDALVKGNSVEHAHGVLLEF 263
++R L++ G E + F+ MK + + A NM++ + N V+ A G+ E
Sbjct: 113 LIRELSRRGCIELCVNVFKWMK---IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169
Query: 264 K--SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
+ S P ++ +++ L+N R + A +M+DM P +YN+ I + +
Sbjct: 170 QKWSCKP-DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+R+ +V ++M++NG P+ VT+ IV+ A Q S+AL +E MK + PDT ++
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 382 LIFILGKAGRLKDACD-------------------------------------VFEDMPK 404
+I+ L K G+ A D VFE M
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 405 QGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXX 464
+G+ ++V+YN ++ H TAL +L ++++ PD+ +Y
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 408
Query: 465 XXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
M K P++ T++ L+ +G L A F ++ G+ P ++ L
Sbjct: 409 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL-- 466
Query: 525 DLEAKSMLKEKEHIEKLMTPPSIR 548
L A S K+K +++ +++ R
Sbjct: 467 -LAACSRSKKKVNVDTVLSAAQSR 489
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 140/344 (40%), Gaps = 1/344 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +++ G+S+ E+ M K + T ++ G +A+ FR+M+
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
+ G+ + ++ L+ A + + VL +S I LN+ ++N + + +
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A + + M++ D ++ I C + + L+EM + P Y+ V+
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A K GQ+++A ++ +MK G PD Y+S++ + + AC++F +M GI
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
D + + ++ + L+ M E+ +
Sbjct: 633 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 692
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
+ M S +G + ++H KSGK++ F ++I+ G+
Sbjct: 693 IQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 736
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 183/403 (45%), Gaps = 8/403 (1%)
Query: 131 VSNSSVQQILKRFNNDWVPAFGFFTWAKTQTG-----YEHSPELYNLMIDILGKSKNFDL 185
VS+ + +L+R ND A F ++ + +S Y+++I LG SK FD
Sbjct: 7 VSSFRLASLLRR-ENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDE 65
Query: 186 VWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM 244
+ +++ + V T V+ + A+ F M ++ +LN L+
Sbjct: 66 LDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLL 125
Query: 245 DALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVP 304
AL+K +E L ++ ++NIL++G + FD A K+ ++M + P
Sbjct: 126 SALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKP 185
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSE-NGCPPNAVTYTIVMFALGKAGQLSQALEV 363
++ + I C D ++ ++ +M + G P Y ++ AL + G+LS A ++
Sbjct: 186 TGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL 245
Query: 364 YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
++ I D YS+LI L KAGR + + E+M ++G D VTYN +I+ C
Sbjct: 246 KDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCV 305
Query: 424 HSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGT 483
+ E+A R+L EM E+ KPD+ +Y+ E M + SPD +
Sbjct: 306 ENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLS 365
Query: 484 FSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+ ++ GL + + + A +E++ +G PR L+ ++ L
Sbjct: 366 YRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
T++ +++ L + G+ A E + +D A + L+ +L+K +L
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMIL 281
Query: 261 LEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
E K P ++ ++N+L+NG+C + + A +V+++M E G PDV SYN + +
Sbjct: 282 EEMSEKGCKP-DTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFR 340
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
K + + + E+M GC P+ ++Y IV L + Q +A + ++M G P
Sbjct: 341 IKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDR 400
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
+ L ++G+L+ V + +GI D ++ MI T C ++ LL
Sbjct: 401 LEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMCKEPVISDSIDLL 455
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 9/361 (2%)
Query: 170 YNLMIDILGK----SKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
+N++I L K S+ DL + E+ A E + T T ++ + G+ E+ A F
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRA--ECRPDVVTFTSIMHLYSVKGEIENCRAVF 211
Query: 226 RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCR 283
M G+ + + N LM A A VL + K +IP + S+ L+N + R
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP-DVVSYTCLLNSYGR 270
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
R +A++V M++ P+V +YN+ I++Y + + ++ +M ++G PN V+
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
++ A ++ + V +S GI +T Y+S I A L+ A +++ M
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 390
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
K+ + D VT+ +IS +C S+ A+ LKEME+ S E Y
Sbjct: 391 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 450
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
M PD+ ++ ++H S K AC F E+ + G+ P A L+
Sbjct: 451 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Query: 524 K 524
+
Sbjct: 511 R 511
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 43/347 (12%)
Query: 241 NMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
NM++ + N V+ A G+ E + S P ++ +++ L+N R + A +M+DM
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKP-DAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
P +YN+ I + ++R+ +V ++M++NG P+ VT+ IV+ A Q S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD--------------------- 397
+AL +E MK + PDT ++ +I+ L K G+ A D
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 398 ----------------VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
VFE M +G+ ++V+YN ++ H TAL +L ++++
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
PD+ +Y M K P++ T++ L+ +G L A
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 502 SFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
F ++ G+ P ++ L L A S K+K +++ +++ R
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTL---LAACSRSKKKVNVDTVLSAAQSR 357
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 140/344 (40%), Gaps = 1/344 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +++ G+S+ E+ M K + T ++ G +A+ FR+M+
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
+ G+ + ++ L+ A + + VL +S I LN+ ++N + + +
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A + + M++ D ++ I C + + L+EM + P Y+ V+
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A K GQ+++A ++ +MK G PD Y+S++ + + AC++F +M GI
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 500
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
D + + ++ + L+ M E+ +
Sbjct: 501 PDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 560
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
+ M S +G + ++H KSGK++ F ++I+ G+
Sbjct: 561 IQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 604
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
+N+++ R DQAR + +M++ PD +Y++ I ++ +R ++++M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR-L 392
P+ TY ++ A G +G +ALEV +KM +G+ PD + +++ K+GR
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH-NIVLSAYKSGRQY 132
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER--SCKPDLETYH 450
A FE M + D T+N +I + AL L M E+ C+PD+ T+
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
E M L P++ +++ L+ G A S ++
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 511 GLTP 514
G+ P
Sbjct: 253 GIIP 256
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 155/360 (43%), Gaps = 7/360 (1%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
E S YN++I+ K+ + +M + VT Y+ ++ K G +DA
Sbjct: 270 EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG 329
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCR 283
M G+ T+ N+ + AL ++ A +L S+ + S+N LM+G+ +
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL---SSMAAPDVVSYNTLMHGYIK 386
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
+ F +A + +D++ P + +YN+ I+ C + ++ EEM+ P+ +T
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM- 402
YT ++ K G LS A EVY++M GI PD Y++ + G A + E+M
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
D+ YN I C A+ +++ PD TY
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR---HGAL 519
+ M + L P + T+ +L++G K+G+L+ A + E+ RG+ P H AL
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 4/279 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +ID L +S N + L EEM + + T T +++ K G A + M
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLEFKSLIPLNSGSFNILMNGWCRVRN 286
G+ D A ++ + A H ++ P + +N+ ++G C+V N
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP-DLTIYNVRIDGLCKVGN 530
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
+A + + G VPD +Y + I Y + F+ + +EM P+ +TY +
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
+++ KAG+L QA + +MK G+ P+ +++L++ + KAG + +A M ++G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
I + +Y +IS C + E ++L KEM ++ +PD
Sbjct: 651 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 157/380 (41%), Gaps = 34/380 (8%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF FF W + Q+ + S + + M++IL ++ DL+ E Y+ V
Sbjct: 102 AFRFFNWIQRQSDVKQSRQAFAAMLEILAEN---DLM---------SEAYL-------VA 142
Query: 210 RRLTKAGKHE-DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIP 268
R G HE D + + + D A + + V A LL F+ +I
Sbjct: 143 ERSIDLGMHEIDDL-----LIDGSFDKLIALKLLDLLLWVYTKK-SMAEKFLLSFEKMIR 196
Query: 269 L----NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
+ + NI++ R ++A V E M EHG +P V ++N+ ++S D +
Sbjct: 197 KGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLER 256
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
VD++ EM + VTY I++ K G++ +A + M+ G ++ LI
Sbjct: 257 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
K G DA V ++M GI TYN I C R + A LL M P
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAP 372
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
D+ +Y+ + + D+ P + T++ L+ GL +SG L+ A
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 505 EELISRGLTPRHGALKQLVK 524
EE+ ++ + P LVK
Sbjct: 433 EEMTTQLIFPDVITYTTLVK 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 165 HSPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
H+P+L YN+ ID L K N E ++ + T T V+R + G+ + A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGW 281
+ M + +L+ K +E A E K + N + N L+ G
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
C+ N D+A + + M+E G P+ +SY I C + + +V ++ +EM + P+
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKM 367
T+ + L K + S+ +E E++
Sbjct: 691 YTHRALFKHLEKDHE-SREVEFLERL 715
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 191/474 (40%), Gaps = 82/474 (17%)
Query: 134 SSVQQILKRFNNDWVPAFGFFTWAKTQ-TGYEHSPELYNLMIDILGKSKNFDLVWELVEE 192
S + QILK+ N V A F AK + Y H+ +Y MIDILGKS + ++E
Sbjct: 13 SLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIER 71
Query: 193 MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS 252
M + V+R ++AG+ EDAI+ F+ + EF + + + L+ +VK +
Sbjct: 72 MKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESE 131
Query: 253 VEHAHGVLLEFKSLIPLNS--GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
+E A + ++ +NS + N+LM C+V D A +V ++M G PD SY
Sbjct: 132 LEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYR 191
Query: 311 SFIESYCHDKDFRKVDQVLEEM----SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++ +C + + +L M S+ G + V Y I++ AL AG++ A+E+ K
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGK 251
Query: 367 MKSHGI-------------------------------------VPDTPFYSSLIFILGKA 389
+ G+ +P YS++ L +
Sbjct: 252 ILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEE 311
Query: 390 GRLKDACDV--------FEDMP-----------KQGIVRDVVT----------------- 413
G+L + +V FE P + G +++ V+
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 414 YNTMISTACAHSREETALRLLKEMEER-SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
YN +I C + A+ LK+M ++ SC + ETY E M
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
P + T+ +++ GL + A + EE++S+ + P K L + +
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 191/474 (40%), Gaps = 82/474 (17%)
Query: 134 SSVQQILKRFNNDWVPAFGFFTWAKTQ-TGYEHSPELYNLMIDILGKSKNFDLVWELVEE 192
S + QILK+ N V A F AK + Y H+ +Y MIDILGKS + ++E
Sbjct: 13 SLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIER 71
Query: 193 MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS 252
M + V+R ++AG+ EDAI+ F+ + EF + + + L+ +VK +
Sbjct: 72 MKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESE 131
Query: 253 VEHAHGVLLEFKSLIPLNS--GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
+E A + ++ +NS + N+LM C+V D A +V ++M G PD SY
Sbjct: 132 LEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYR 191
Query: 311 SFIESYCHDKDFRKVDQVLEEM----SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
++ +C + + +L M S+ G + V Y I++ AL AG++ A+E+ K
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGK 251
Query: 367 MKSHGI-------------------------------------VPDTPFYSSLIFILGKA 389
+ G+ +P YS++ L +
Sbjct: 252 ILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEE 311
Query: 390 GRLKDACDV--------FEDMP-----------KQGIVRDVVT----------------- 413
G+L + +V FE P + G +++ V+
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 414 YNTMISTACAHSREETALRLLKEMEER-SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
YN +I C + A+ LK+M ++ SC + ETY E M
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
P + T+ +++ GL + A + EE++S+ + P K L + +
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 178/405 (43%), Gaps = 9/405 (2%)
Query: 140 LKRFNN--DWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHE 197
L RF W W + Q + S + ++I GK NF+ ++ ++K
Sbjct: 110 LVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMG 169
Query: 198 GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
+ + T ++ + GK +A A FRRM+ G + +++ V+G+ + A
Sbjct: 170 STPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAE 229
Query: 258 GV----LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFI 313
V L E KS + + +++++ + + N+++ARKV M G +YNS +
Sbjct: 230 EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM 289
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
+ +++V ++ ++M + P+ V+Y +++ A G+A + +AL V+E+M G+
Sbjct: 290 ---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 346
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
P Y+ L+ +G ++ A VF+ M + I D+ +Y TM+S S E A +
Sbjct: 347 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 406
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
K ++ +P++ TY E M + + + + ++ +
Sbjct: 407 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 466
Query: 494 SGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
A +++E+ S G+ P A L+ + L+E + +
Sbjct: 467 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 41/277 (14%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
F +L+ + ++ NF+ A +V+ + + G P+V SY + +ESY + + M
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM---KSHGIVPDTPFYSSLIFILGKAG 390
+G P+A+TY I++ + + +A EV+E + K + PD Y +I++ KAG
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+ A VF M +G+ + VTYN+++S E S K + Y
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSF------------------ETSYKEVSKIY- 302
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
+ M ++D+ PD+ +++LL+ ++ + + A S FEE++
Sbjct: 303 -------------------DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 511 GLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSI 547
G+ P H A L+ M+++ + + K M I
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 178/405 (43%), Gaps = 9/405 (2%)
Query: 140 LKRFNN--DWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHE 197
L RF W W + Q + S + ++I GK NF+ ++ ++K
Sbjct: 117 LVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMG 176
Query: 198 GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
+ + T ++ + GK +A A FRRM+ G + +++ V+G+ + A
Sbjct: 177 STPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAE 236
Query: 258 GV----LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFI 313
V L E KS + + +++++ + + N+++ARKV M G +YNS +
Sbjct: 237 EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM 296
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
+ +++V ++ ++M + P+ V+Y +++ A G+A + +AL V+E+M G+
Sbjct: 297 ---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 353
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
P Y+ L+ +G ++ A VF+ M + I D+ +Y TM+S S E A +
Sbjct: 354 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
K ++ +P++ TY E M + + + + ++ +
Sbjct: 414 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 473
Query: 494 SGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
A +++E+ S G+ P A L+ + L+E + +
Sbjct: 474 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 41/277 (14%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
F +L+ + ++ NF+ A +V+ + + G P+V SY + +ESY + + M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM---KSHGIVPDTPFYSSLIFILGKAG 390
+G P+A+TY I++ + + +A EV+E + K + PD Y +I++ KAG
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+ A VF M +G+ + VTYN+++S E S K + Y
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSF------------------ETSYKEVSKIY- 309
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
+ M ++D+ PD+ +++LL+ ++ + + A S FEE++
Sbjct: 310 -------------------DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 511 GLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSI 547
G+ P H A L+ M+++ + + K M I
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 2/308 (0%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKS 265
++ L K G E A ++ + G +D+ L+ +G ++ A V ++ +
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEV 260
Query: 266 LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKV 325
NS S++IL++G C V ++A + + M E G P +Y I++ C K
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
+ +EM GC PN TYT+++ L + G++ +A V KM I P Y++LI
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
K GR+ A ++ M K+ +V T+N ++ C + A+ LLK M + PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 446 LETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
+ +Y+ M D+ PD TF+ +++ K GK D A +F
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 506 ELISRGLT 513
++ +G++
Sbjct: 501 LMLRKGIS 508
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 191/477 (40%), Gaps = 53/477 (11%)
Query: 72 IPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQV 131
I + +D+HI L+ N D ++ + KE +P V+ ++ HG
Sbjct: 221 ILKIGFVLDSHI--GTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGL-- 276
Query: 132 SNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVE 191
V ++ + AFG + G + S Y ++I L D + L +
Sbjct: 277 --CEVGRLEE--------AFGLKDQMG-EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD 325
Query: 192 EMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGN 251
EM ++T T ++ L + GK E+A R+M + + N L++ K
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDG 385
Query: 252 SVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSY 309
V A +L +E ++ P N +FN LM G CRV +A +++ M ++G PD+ SY
Sbjct: 386 RVVPAFELLTVMEKRACKP-NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 310 NSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS 369
N I+ C + ++L M+ P+ +T+T ++ A K G+ A M
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDA-----------------------------CDVFE 400
GI D ++LI + K G+ +DA C V E
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 401 DMP------KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
++ K G+V VVTY T++ + R+L+ M+ C P++ Y
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
M + +SP+ T++++V G +GKLD A ++ RG
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 163/391 (41%), Gaps = 36/391 (9%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+++I L + + + L ++M + + T T +++ L G + A F M
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G + +L+D L + +E A+GV + K I + ++N L+NG+C+
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A +++ M++ P+V ++N +E C K +L+ M +NG P+ V+Y +++
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L + G ++ A ++ M I PD ++++I K G+ A M ++GI
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 409 RDVVTYNTMISTACAHSREETALRLLK------------------EMEERSCK------- 443
D VT T+I C + AL +L+ +M + CK
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 444 ----------PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
P + TY E M + P++ ++++++GL +
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 494 SGKLDHACSFFEELISRGLTPRHGALKQLVK 524
G+++ A + G++P H +VK
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 43/347 (12%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T T ++ + K GK DA+ + + + +LN+++D L KG V+ +L +
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 264 K--SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
L+P + ++ L++G R + + +++E MK G +P+V+ Y I C
Sbjct: 573 NKLGLVP-SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ +++L M ++G PN VTYT+++ G+L +ALE M G + YSS
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 382 LI--FILGKAG--------------------RLKDACDVFEDMPKQGIVRDVVTYNTMIS 419
L+ F+L + G + + V E + G + + + +++
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLG--GCISGLCIF--LVT 747
Query: 420 TACAHSREETALRLLKEMEERSCKPD------LETYHPXXXXXXXXXXXXXXXXXXEHMF 473
C R + + L++ + ER + +E+Y +
Sbjct: 748 RLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITL-------VL 800
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI-SRGLTPRHGAL 519
K+ P +F L++ GL+K G + A EL+ S G+ + G L
Sbjct: 801 KSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVL 847
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 152/342 (44%), Gaps = 4/342 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN ++ K + +++VE M + L T ++ L AG + + MK
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 230 EFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLEFKS-LIPLNSGSFNILMNGWCRVRNF 287
+ D N L+D + G S+E A ++ + ++ + N + NI + C+
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLE-ARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 288 DQA-RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
+ RKV E + HGF PD+ +Y++ I++Y D +++ EM + G N +T
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ AL K +L +A + G + D Y +LI + +++ A +++++M K
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
I V T+N++I C H + E A+ E+ E PD T++
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
K+ PD T ++L++GL K G + A +FF LI
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 3/294 (1%)
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLN--SGSFNILM 278
A F M + GV ++ N+L++ +E A G+L S +N + ++N ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ ++++ DMK++G VP+ +YN+ + YC ++ Q++E M +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P+ TY I++ L AG + + LE+ + MKS + PD Y++LI + G +A +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM-EERSCKPDLETYHPXXXXXX 457
E M G+ + VT+N + C + E R +KE+ + PD+ TYH
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
M + + + T + ++ L K KLD A + RG
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 143/327 (43%), Gaps = 44/327 (13%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY----VTLYTMTKVLRRLTKAGK 217
G + + +N+ + L K + + V V+E+ G+ VT +T+ K K G
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY---LKVGD 431
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL-LEFKSLIPLNSGSFNI 276
A+ R M + G+ M+T LN ++DAL K ++ AH +L K ++ ++
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L+ G+ R ++A ++ ++MK+ P V ++NS I CH + +E++E+G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD--------------------- 375
P+ T+ ++ K G++ +A E Y + H PD
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 376 -------------TPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
T Y+++I K +LK+A D+ +M ++G+ D TYN+ IS
Sbjct: 612 NFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671
Query: 423 AHSREETALRLLKEMEER--SCKPDLE 447
+ LLK+ + S K DL+
Sbjct: 672 EDGKLSETDELLKKFSGKFGSMKRDLQ 698
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 26/264 (9%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +I + + + E+ +EM K + T+ T ++ L GK E A+ F +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFD 288
E G+ D + N ++ K VE A E K ++ + NIL+NG C+ +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A + E V D +YN+ I ++C DK ++ +L EM E G P+ TY +
Sbjct: 609 KALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV-FEDMP---- 403
L + G+LS+ E+ +K GK G +K V E P
Sbjct: 668 SLLMEDGKLSETDELLKKFS------------------GKFGSMKRDLQVETEKNPATSE 709
Query: 404 -KQGIVRDVVTYNTMISTACAHSR 426
K+ + + + Y+ +I C+ R
Sbjct: 710 SKEELNTEAIAYSDVIDELCSRGR 733
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 4/181 (2%)
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK---AGRLKD 394
PP+ + I + A G+ AL++++KM + P+ ++L+ L + + +
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM-EERSCKPDLETYHPXX 453
A +VF+DM K G+ +V T+N +++ C + E AL +L+ M E PD TY+
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
M KN L P+ T++ LV+G K G L A E + +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 514 P 514
P
Sbjct: 308 P 308
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 170/408 (41%), Gaps = 42/408 (10%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGY---VTLYTMTKVLRRLTKAGKH------- 218
LYN I L S+ +D WE+ E M K Y VT + LR+ ++ K
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 219 --------------------------EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS 252
E+A+ M++ G+ +T N LMDA K N
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 253 VEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
+E G+ E K L P ++ ++NILM+ + R D ++ +M++ G P+V SY
Sbjct: 395 IEEVEGLFTEMRDKGLKP-SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 311 SFIESYCHDKDFRKV--DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
I +Y K + D L M + G P++ +YT ++ A +G +A +E+M
Sbjct: 454 CLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
GI P Y+S++ ++G ++++ M ++ I +TYNT++
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 429 TALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A ++ E + +P + TY+ + M +L PD T+S ++
Sbjct: 573 EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Query: 489 HGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKE 536
+ + A + + ++ G P + ++L LE K+ K ++
Sbjct: 633 YAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRK 680
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 169/410 (41%), Gaps = 9/410 (2%)
Query: 110 LKEHHSSPELVAQALDGHGFQVSNSS-VQQILKRFNNDWVPA-FGFFTWAKTQTGYEHSP 167
LKE+ + E+ L G +VS++ V+ ++ + +V + F+ W Q SP
Sbjct: 183 LKENQTLGEM----LSGFERRVSDTECVEALVMMGESGFVKSCLYFYEWMSLQEPSLASP 238
Query: 168 ELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR 227
+++ +LG+ + D + L+ + E + + + L+ + +++DA +
Sbjct: 239 RACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEA 298
Query: 228 MKEFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVR 285
M + V D +L+ L K G S + + + + + + F L+ +C
Sbjct: 299 MDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG 358
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
++A + +M++ G + YN+ +++Y +V+ + EM + G P+A TY
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD-ACDVFEDMPK 404
I+M A + Q + +M+ G+ P+ Y+ LI G+ ++ D A D F M K
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 405 QGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXX 464
G+ +Y +I E A +EM + KP +ETY
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Query: 465 XXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ M + + T++ L+ G K G A E GL P
Sbjct: 539 LMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 162 GYEHSPELYNLMIDILGKSKNF-DLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHED 220
G E + + Y +I G++K D+ + M K + ++ T ++ + +G HE
Sbjct: 444 GLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEK 503
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-----IPLNSGSFN 275
A A+F M + G+ ++DA + G L+E L I ++N
Sbjct: 504 AYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT----GKLMEIWKLMLREKIKGTRITYN 559
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
L++G+ + + +AR V+ + + G P V +YN + +Y K+ Q+L+EM+
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
P+++TY+ +++A + +A ++ M G VPD Y L IL + K+
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNR 679
Query: 396 CD 397
D
Sbjct: 680 KD 681
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 152 GFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRR 211
G FT + + G + S YN+++D + D+V L+ EM + + T ++
Sbjct: 400 GLFTEMRDK-GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISA 458
Query: 212 LTKAGKHEDAIA-AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPL 269
+ K D A AF RMK+ G+ + + L+ A E A+ E K I
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKP 518
Query: 270 NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
+ ++ +++ + R + + ++ + M +YN+ ++ + + + V+
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E S+ G P+ +TY ++M A + GQ ++ ++ ++M + + PD+ YS++I+ +
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRV 638
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTM 417
K A + M K G V D +Y +
Sbjct: 639 RDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 35/258 (13%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
+++ C+ N A+ + +M E G P+V +YN I+S+CH + DQ+L M E
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
P+ VT++ ++ A K ++S+A E+Y++M I P T Y+S+I K R+ DA
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXX 456
+ + M +G DVVT++T+I+ C R + + + EM R
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG--------------- 180
Query: 457 XXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
+ + T++ L+HG + G LD A E+IS G+ P +
Sbjct: 181 --------------------IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Query: 517 GALKQLVKDLEAKSMLKE 534
++ L +K L++
Sbjct: 221 ITFHCMLAGLCSKKELRK 238
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 117/236 (49%), Gaps = 3/236 (1%)
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-- 263
T ++ RL K G H +A F M E G+ + N ++D+ A +L
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
K + P + +F+ L+N + + R +A ++ ++M P +YNS I+ +C
Sbjct: 74 KQINP-DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVD 132
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
++L+ M+ GC P+ VT++ ++ KA ++ +E++ +M GIV +T Y++LI
Sbjct: 133 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+ G L A D+ +M G+ D +T++ M++ C+ A +L+++++
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN MID +G+ DA R M
Sbjct: 48 YNCMID-----------------------------------SFCHSGRWSDADQLLRHMI 72
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK--SLIPLNSGSFNILMNGWCRVRNF 287
E ++ D + L++A VK V A + E S+ P + ++N +++G+C+
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP-TTITYNSMIDGFCKQDRV 131
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
D A+++++ M G PDV ++++ I YC K ++ EM G N VTYT +
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK 404
+ + G L A ++ +M S G+ PD + ++ L L+ A + ED+ K
Sbjct: 192 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 46/261 (17%)
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
M + DV + ++ C D + + EM E G PN +TY ++ + +G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
S A ++ M I PD +S+LI K ++ +A +++++M + I +TYN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
MI C R + A R+L M + C
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGC---------------------------------- 146
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL--------TPRHGALKQLVKDLEA 528
SPD+ TFS L++G K+ ++D+ F E+ RG+ T HG + V DL+A
Sbjct: 147 -SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ--VGDLDA 203
Query: 529 KSMLKEKEHIEKLMTPPSIRF 549
L E I + P I F
Sbjct: 204 AQDLL-NEMISCGVAPDYITF 223
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
++ +I+ K + E+ +EM + + T T ++ K + +DA M
Sbjct: 83 FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMA 142
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
G D + L++ K V++ + E + I N+ ++ L++G+C+V + D
Sbjct: 143 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 202
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
A+ ++ +M G PD +++ + C K+ RK +LE++ ++
Sbjct: 203 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 164/400 (41%), Gaps = 60/400 (15%)
Query: 151 FGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKH-----EGYVTLYTM 205
F F WA T + H + + M L + FD ++ L+ +A + G + +
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPEL 156
Query: 206 TKVLRR----LTKAGKHEDAIAAFRRMKEFGVDM--DTAALNMLMDALVKGNSVEHAHGV 259
+ R +A K + A+ AF MK +D + N +++ VK ++ A
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRL-IDGKPNVGVYNTVVNGYVKSGDMDKA--- 212
Query: 260 LLEF-----KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE 314
L F K + +FNIL+NG+CR FD A + +MKE G P+V S+N+ I
Sbjct: 213 -LRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 315 SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS---------------- 358
+ + ++ EM E GC + T I++ L + G++
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 359 -------------------QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
+A+E+ E++ G P ++L+ L K+GR + A
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 400 EDMPKQGIVRDVVTYNTMISTACA--HSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
E M GI+ D VT+N ++ C+ HS + LRLL + +PD TYH
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA--SSKGYEPDETTYHVLVSGFT 449
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
M D+ PD+ T++ L+ GL +GK
Sbjct: 450 KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 152/370 (41%), Gaps = 36/370 (9%)
Query: 179 KSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA 238
K + DL E+ M +T+Y++T V+ L + G+ E + + G+ +
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 239 ALNMLMDALVKGNSVEHAHGVL-LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
N +++A VK GVL + K + N ++ +LM + A K+ ++M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
+E G DV Y S I C + ++ + +E++E G P++ TY ++ + K G++
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT- 416
A + +M+S G+ +++LI + G + +A +++ M ++G DV T NT
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 417 ----------------------------------MISTACAHSREETALRLLKEMEERSC 442
+I C E A RL EM +
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
+P+ TY+ +M N + PD T++ L+HG + +D A
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 503 FFEELISRGL 512
F E+ +GL
Sbjct: 561 LFSEMGLKGL 570
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 142/292 (48%), Gaps = 3/292 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G E +Y +I + N + L +E+ + + YT ++ + K G+
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNIL 277
A M+ GV++ N L+D + V+ A + ++E K + + N +
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF-QADVFTCNTI 440
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
+ + R++ +D+A++ + M E G SY + I+ YC + + + ++ EMS G
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
PNA+TY ++++A K G++ +A ++ M+++G+ PD+ Y+SLI A + +A
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
+F +M +G+ ++ VTY MIS + + A L EM+ + D + Y
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVY 612
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 159/366 (43%), Gaps = 36/366 (9%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G ++ Y L++++ K+ +L +EM + ++ T ++ + G + A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
F + E G+ + L+D + K + A ++ E +S + + FN L++G
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+CR D+A + + M++ GF DVF+ N+ + K + + Q L M E G +
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
V+YT ++ K G + +A ++ +M S G+ P+ Y+ +I+ K G++K+A +
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
+M G+ D TY ++I C + A+RL EM + + TY
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTY----------- 577
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
++++ GL K+GK D A ++E+ +G T +
Sbjct: 578 ------------------------TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Query: 521 QLVKDL 526
L+ +
Sbjct: 614 ALIGSM 619
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSL 266
V R G E+ + F M + G+ +D + + + A K ++ + S
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD 326
+ + S I++ G CR ++++K++++ G P+ ++YN+ I +Y +DF V+
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
VL+ M ++G N VTYT++M K G++S A +++++M+ GI D Y+SLI
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 387 GKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
+ G +K A +F+++ ++G+ TY +I C A L+ EM+ +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
T+ G S Y +ID + K L+ EM +T ++ + G
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNIL 277
++A + M++ G D N + + + A L + + L++ S+ L
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
++ +C+ N ++A+++ +M G P+ +YN I +YC ++ ++ M NG
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
P++ TYT ++ A + +A+ ++ +M G+ ++ Y+ +I L KAG+ +A
Sbjct: 536 DPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFG 595
Query: 398 VFEDMPKQGIVRDVVTYNTMIST 420
++++M ++G D Y +I +
Sbjct: 596 LYDEMKRKGYTIDNKVYTALIGS 618
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 35/258 (13%)
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
R D ++ M + G V+S +E C + K ++++E S G P A TY
Sbjct: 203 RRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTY 262
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK 404
++ A K S V + MK G+V + Y+ L+ + K G++ DA +F++M +
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 405 QGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXX 464
+GI DV Y ++IS C + A L E+ E+
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG----------------------- 359
Query: 465 XXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
LSP T+ L+ G+ K G++ A E+ S+G+ L+
Sbjct: 360 ------------LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 525 DLEAKSMLKEKEHIEKLM 542
K M+ E I +M
Sbjct: 408 GYCRKGMVDEASMIYDVM 425
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Query: 355 GQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK-DAC-DVFEDMPKQGIVRDVV 412
G + L V++ M G+ D S ++F++ R + D C ++F M G+ V
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDER--SCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVY 225
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
+ ++ C E + +L+KE + KP+ TY+ + M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
K+ + + T++LL+ K+GK+ A F+E+ RG+
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 164/379 (43%), Gaps = 3/379 (0%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
E+ E N ++ L + +LVE MA+H + + ++R L + + + A+
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL--IPLNSGSFNILMNGW 281
R M G DT NM++ L K + A VLLE SL P + ++N ++
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTAL-VLLEDMSLSGSPPDVITYNTVIRCM 219
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
N +QA + +D ++G P + +Y +E C + +VLE+M+ GC P+
Sbjct: 220 FDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI 279
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
VTY ++ + G L + V + + SHG+ +T Y++L+ L + ++
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNI 339
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX 461
M + V+TYN +I+ C A+ +M E+ C PD+ TY+
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 462 XXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQ 521
+ P L T++ ++ GL K G + A + +++ G+ P +
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 522 LVKDLEAKSMLKEKEHIEK 540
L+ ++++E + K
Sbjct: 460 LIYGFCRANLVEEAGQVLK 478
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 1/295 (0%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
+ T T ++ + + AI M G D N L++ + ++E V+
Sbjct: 244 MITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQ 303
Query: 262 EFKS-LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
S + LN+ ++N L++ C +D+ +++ M + + P V +YN I C +
Sbjct: 304 HILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKAR 363
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ +M E C P+ VTY V+ A+ K G + A+E+ +K+ P Y+
Sbjct: 364 LLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYN 423
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
S+I L K G +K A +++ M GI D +T ++I C + E A ++LKE R
Sbjct: 424 SVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR 483
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSG 495
TY E M PD ++ +V G+ + G
Sbjct: 484 GNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G E + YN ++ L + +D V E++ M + T+ T ++ L KA A
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRA 368
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-SLIPLNSGSFNILMNG 280
I F +M E D N ++ A+ K V+ A +L K + P ++N +++G
Sbjct: 369 IDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ +A ++ M + G PD + S I +C + QVL+E S G
Sbjct: 429 LAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR 488
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
TY +V+ L K ++ A+EV E M + G PD Y++++
Sbjct: 489 GSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 172/389 (44%), Gaps = 8/389 (2%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+TG+ S Y ++ + K + + +V E+ + + V+ +++G E
Sbjct: 73 ETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNME 132
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL---LEFKSL-IPLNSGSFN 275
DA+ A +MKE G++ T+ N L+ E + +L LE ++ + N +FN
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD-FRKVDQVLEEMS- 333
+L+ WC+ + ++A +V++ M+E G PD +YN+ Y + R +V+E+M
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
+ PN T IV+ + G++ L +MK + + ++SLI +
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
+V M + + DV+TY+T+++ + E A ++ KEM + KPD Y
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
E + P++ F+ ++ G +G +D A F ++ G++
Sbjct: 373 KGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVS 431
Query: 514 PRHGALKQLVKD-LEAKSMLKEKEHIEKL 541
P + L+ LE K K +E ++ +
Sbjct: 432 PNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 15/349 (4%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV----TLYTMTKVLRRLTKAGK 217
G + YN +I G + + EL++ M EG V + T +++ K K
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLML-EEGNVDVGPNIRTFNVLVQAWCKKKK 203
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE---FKSLIPLNSGSF 274
E+A ++M+E GV DT N + V+ A ++E K N +
Sbjct: 204 VEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC 263
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
I++ G+CR + + MKE ++ +NS I + D +D+VL M E
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKE 323
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
+ +TY+ VM A AG + +A +V+++M G+ PD YS L +A K
Sbjct: 324 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 383
Query: 395 ACDVFEDMPKQGIVR---DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
A ++ E + IV +VV + T+IS C++ + A+R+ +M + P+++T+
Sbjct: 384 AEELLETL----IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
+ M + P+ TF LL R +G D +
Sbjct: 440 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 488
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A+ V + + E G P + SY + + + K + + ++ E+ ++G +++ + V+
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A ++G + A++ KMK G+ P T Y++LI G AG+ + + ++ + M ++G V
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 409 R---DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX--XXXXXXXXX 463
++ T+N ++ C + E A ++K+MEE +PD TY+
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ + K P+ T ++V G + G++ F +
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
++N +I+ + + D + E++ M + + T + V+ + AG E A F+ M
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFD 288
+ GV D A ++L V+ + A +L N F +++GWC + D
Sbjct: 357 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMD 416
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A +V M + G P++ ++ + + Y K K ++VL+ M G P T+ ++
Sbjct: 417 DAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLA 476
Query: 349 FALGKAGQLSQALEVYEKMKSHGI 372
A AG ++ + +K I
Sbjct: 477 EAWRVAGLTDESNKAINALKCKDI 500
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 152/335 (45%), Gaps = 5/335 (1%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
+ V+ + K G+ + A M FG + D + N L+D + + A VL
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 264 KS----LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
++ + + SFN L NG+ +++ D+ M M + P+V +Y+++I+++C
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC-SPNVVTYSTWIDTFCKS 176
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+ + + M + PN VT+T ++ KAG L A+ +Y++M+ + + Y
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
++LI K G ++ A +++ M + + + + Y T+I + A++ L +M
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 440 RSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDH 499
+ + D+ Y E M K+DL PD+ F+ +++ KSG++
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 500 ACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
A + + +LI RG P AL ++ + L E
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 152/359 (42%), Gaps = 6/359 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ ID KS L + M + + T T ++ KAG E A++ ++ M+
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
+ ++ L+D K ++ A + + + NS + +++G+ + + D
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A K + M G D+ +Y I C + ++ +++E+M ++ P+ V +T +M
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A K+G++ A+ +Y K+ G PD S++I + K G+L +A V+ + K
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEKA--- 401
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+ V Y +I C RL ++ E PD Y
Sbjct: 402 -NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLE 527
M + L DL ++ L++GL G + A F+E+++ G++P L++ E
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 117/242 (48%), Gaps = 4/242 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y ++I L + E+VE+M K + + T ++ K+G+ + A+ + ++
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
E G + D AL+ ++D + K + A + + + N + +L++ C+ +F +
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEA----IVYFCIEKANDVMYTVLIDALCKEGDFIE 421
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
++ + E G VPD F Y S+I C + ++ M + G + + YT +++
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
L G + +A +V+++M + GI PD+ + LI K G + A D+ DM ++G+V
Sbjct: 482 GLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT 541
Query: 410 DV 411
V
Sbjct: 542 AV 543
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 122/303 (40%), Gaps = 33/303 (10%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +ID K E+ M + T ++ + G ++A+ +M
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNF 287
G+ +D A +++ L ++ A ++ +E L+P + F +MN + +
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP-DMVIFTTMMNAYFKSGRM 354
Query: 288 DQARKVMEDMKEHGFVPDVFS------------------------------YNSFIESYC 317
A + + E GF PDV + Y I++ C
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALC 414
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTP 377
+ DF +V+++ ++SE G P+ YT + L K G L A ++ +M G++ D
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
Y++LI+ L G + +A VF++M GI D ++ +I A LL +M
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Query: 438 EER 440
+ R
Sbjct: 535 QRR 537
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 118/317 (37%), Gaps = 46/317 (14%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L+N C + + K + + G+ P S+NS + C + + ++ M G
Sbjct: 31 LINSNCGILSL----KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFG 86
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMK-SHGIV---------------------- 373
C P+ ++Y ++ + G + A V E ++ SHG +
Sbjct: 87 CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD 146
Query: 374 --------------PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIS 419
P+ YS+ I K+G L+ A F M + + +VVT+ +I
Sbjct: 147 EVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Query: 420 TACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSP 479
C E A+ L KEM ++ TY M ++ + P
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 480 DLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIE 539
+ ++ ++ G + G D+A F +++++G+ A ++ L LKE I
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 540 KLM-----TPPSIRFTS 551
+ M P + FT+
Sbjct: 327 EDMEKSDLVPDMVIFTT 343
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 5/300 (1%)
Query: 243 LMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH 300
L+ L K N ++ A V L+ +IP ++ ++ L+N C+ N A +++E M++H
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIP-DASAYTYLVNQLCKRGNVGYAMQLVEKMEDH 170
Query: 301 GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
G+ + +YN+ + C + Q +E + + G PNA TY+ ++ A K +A
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
+++ +++ G P+ Y+ L+ K GR DA +F ++P +G +VV+YN ++
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 421 ACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND--LS 478
C R E A LL EM+ P + TY+ + M K +
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFR 350
Query: 479 PDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
+++ ++ L K GK+D +E+I R P G + E S ++E +I
Sbjct: 351 VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYI 410
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 152/361 (42%), Gaps = 16/361 (4%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
Q G + Y+ +++ K + D +L++E+ G L + +L K G+ +
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG------- 272
DA+A FR + G + + N+L+ L E A+ +L E ++ G
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAE------MDGGDRAPSVV 317
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKE--HGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
++NIL+N +QA +V+++M + H F SYN I C + V + L+
Sbjct: 318 TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLD 377
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
EM C PN TY + ++ +A + + + + FY S+I L + G
Sbjct: 378 EMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKG 437
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE-RSCKPDLETY 449
A + +M + G D TY+ +I C A+ +L MEE +CKP ++ +
Sbjct: 438 NTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNF 497
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ E M + P+ T+++LV G+ +L+ A +EL
Sbjct: 498 NAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRL 557
Query: 510 R 510
R
Sbjct: 558 R 558
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
+E + G P+V + C +K +V+E M +G P+A YT ++ L K
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 354 AGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
G + A+++ EKM+ HG +T Y++L+ L G L + E + ++G+ + T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 414 YNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF 473
Y+ ++ A + A++LL E+ + +P+L +Y+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYN----------------------- 250
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL------- 526
+L+ G K G+ D A + F EL ++G + L++ L
Sbjct: 251 ------------VLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 527 EAKSMLKE 534
EA S+L E
Sbjct: 299 EANSLLAE 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 23/299 (7%)
Query: 124 LDGHGFQVSNSSVQQILKRFNND--WVPAFGFFTWAKTQTGYEHSPEL--YNLMIDILGK 179
L GF+ + S +L+ D W A G + +P + YN++I+ L
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLA---EMDGGDRAPSVVTYNILINSLAF 328
Query: 180 SKNFDLVWELVEEMAK--HEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDT 237
+ ++++EM+K H+ VT + V+ RL K GK + + M +
Sbjct: 329 HGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
Query: 238 AALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGS-------FNILMNGWCRVRNFDQA 290
N + G+ EH V F + L++ + ++ CR N A
Sbjct: 389 GTYNAI------GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAA 442
Query: 291 RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN-GCPPNAVTYTIVMF 349
+++ +M GF PD +Y++ I C + F +VL M E+ C P + ++
Sbjct: 443 FQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMIL 502
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
L K + A+EV+E M +P+ Y+ L+ + L+ A +V +++ + ++
Sbjct: 503 GLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVI 561
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 9/281 (3%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+++ID L K N + L+ +M K L T T ++R L K GK E+A F R+
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNF 287
G+++D L+D + + ++ A +L +E + + P + ++N ++NG C
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQP-SILTYNTVINGLCMAGRV 398
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+A +V G V DV +Y++ ++SY ++ V ++ E P + V I+
Sbjct: 399 SEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNIL 453
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ A G +A +Y M + PDT Y+++I K G++++A ++F ++ K
Sbjct: 454 LKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS- 512
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
V V YN +I C +TA +L E+ E+ D+ T
Sbjct: 513 VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHT 553
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 137/310 (44%), Gaps = 12/310 (3%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
L T T ++ L + GK ++ RR+++ G + D + + KG ++ A L+
Sbjct: 207 LVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA---LM 263
Query: 262 EFKSLIPLNSG----SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
+ + ++ S++IL++G + N ++A ++ M + G P++ +Y + I C
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTP 377
+ + + G + Y ++ + + G L++A + M+ GI P
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
Y+++I L AGR+ +A D +G+V DV+TY+T++ + + L + +
Sbjct: 384 TYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Query: 438 EERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
E DL + M + DL+PD T++ ++ G K+G++
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 498 DHACSFFEEL 507
+ A F EL
Sbjct: 499 EEALEMFNEL 508
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 235 MDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKV 293
MD ++++ L K + A + KS + LN+ ++N L+NG C+ +A ++
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
+ ++ G VP +Y I++ C + F +++L+ M G PN + Y ++ K
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 354 AGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
GQ A+ V + + PD SS+I K G +++A VF + + I D
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 414 YNTMISTACAHSREETALRLLKEM 437
+ +I C R E A LL+EM
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREM 856
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 137/342 (40%), Gaps = 6/342 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +ID L K D E++ E+ + Y+ ++T +L + G + + ++
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSL-IPLNSGSFNILMNGWCRVRN 286
+ D+ LN + L K S E A V ++ K L + S L++ +R+
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD---NLRS 635
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
D V+ + DV Y I C + K + G N +TY
Sbjct: 636 LDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNS 695
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ L + G L +AL +++ +++ G+VP Y LI L K G DA + + M +G
Sbjct: 696 LINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG 755
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
+V +++ YN+++ C + E A+R++ PD T
Sbjct: 756 LVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEAL 815
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
++S D F L+ G G+++ A E++
Sbjct: 816 SVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 113/293 (38%), Gaps = 38/293 (12%)
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN--------------------- 335
++ HG P ++ S I + + +VLE M+
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 336 GCP-----------------PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
G P PN VTYT ++ AL + G++ + ++ +++ G D F
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
YS+ I K G L DA +M ++G+ RDVV+Y+ +I E AL LL +M
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
+ +P+L TY + + D + L+ G+ + G L+
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 499 HACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIRFTS 551
A S ++ RG+ P ++ L + E + + K + I +++
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYST 417
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 136/337 (40%), Gaps = 30/337 (8%)
Query: 193 MAKHEGYVTLYTM-----TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL 247
+ + G TL +M T ++ L K G A+ K GV ++T N L++ L
Sbjct: 641 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 248 VKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
+ + A + LE L+P + ++ IL++ C+ F A K+++ M G VP+
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVP-SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN 759
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
+ YNS ++ YC +V+ P+A T + ++ K G + +AL V+
Sbjct: 760 IIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFT 819
Query: 366 KMKSHGIVPDTPFYSSLIFILG--KAGRLKDACDVFEDM-PKQGIVRDVVTYNTMISTA- 421
+ K I D F+ L I G GR+++A + +M + +V+ + + ++ +
Sbjct: 820 EFKDKNISAD--FFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESE 877
Query: 422 ---------CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
C R A+++L E+ Y E +
Sbjct: 878 SIRGFLVELCEQGRVPQAIKILDEISS-------TIYPSGKNLGSYQRLQFLNDVNEEEI 930
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
K D D + V L SGKL+ A F ++S
Sbjct: 931 KKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVLS 967
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 174/433 (40%), Gaps = 58/433 (13%)
Query: 92 TPTFNENKHDYVEAISTLL----KEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDW 147
TPT K DY AI+ ++ +E H PE ++L+ V++ V ++L+ +
Sbjct: 41 TPT----KGDYFAAINHVVNIVRREIH--PE---RSLNSLRLPVTSEFVFRVLRATSRSS 91
Query: 148 VPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTK 207
+ FF WA++ Y + Y EL + +A H+ Y +++ + K
Sbjct: 92 NDSLRFFNWARSNPSYTPTSMEYE----------------ELAKSLASHKKYESMWKILK 135
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLI 267
+MK+ +D+ L +++ K V+ A +E + +
Sbjct: 136 -------------------QMKDLSLDISGETLCFIIEQYGKNGHVDQA----VELFNGV 172
Query: 268 PLNSGS------FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
P G +N L++ C V+ F A ++ M G PD +Y + +C
Sbjct: 173 PKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGK 232
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
++ + L+EMS G P A +++ L AG L A E+ KM G VPD ++
Sbjct: 233 MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNI 292
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
LI + K+G ++ +++ K G+ D+ TY T+I + + A RLL E
Sbjct: 293 LIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
KP Y P M P+ +++L+ + GK A
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAA 412
Query: 502 SFFEELISRGLTP 514
++ E+ GL P
Sbjct: 413 NYLVEMTEMGLVP 425
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 1/223 (0%)
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
+ P Y +S K + + ++L++M + + T ++ GK G + QA+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 362 EVYEKM-KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
E++ + K+ G Y+SL+ L A + M ++G+ D TY +++
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 421 ACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPD 480
C+ + + A L EM R P M K PD
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 481 LGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
+ TF++L+ + KSG+++ + GL K L+
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLI 329
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 169/406 (41%), Gaps = 51/406 (12%)
Query: 136 VQQILKRF---NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEE 192
V ++L R +++ + A FF ++ + + + + + IL + + FD W L+ E
Sbjct: 69 VSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAE 128
Query: 193 MAK-HEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM------KEFGVDMDTAALNMLMD 245
+ K + ++ +M+ +L ++ K G +E+ + AF +M K+FGVD
Sbjct: 129 VRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVD----------- 177
Query: 246 ALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
FNIL+ +C R +AR + E + F PD
Sbjct: 178 ---------------------------EFNILLRAFCTEREMKEARSIFEKLHSR-FNPD 209
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
V + N + + D + EM + G PN+VTY I + K +AL ++E
Sbjct: 210 VKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE 269
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
M ++LI G A A +F+++ K+G+ D YN ++S+
Sbjct: 270 DMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCG 329
Query: 426 REETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX--XXXXXXXXEHMFKNDLSPDLGT 483
A++++KEMEE+ +PD T+H + M + L P T
Sbjct: 330 DVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPT 389
Query: 484 FSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAK 529
+L+ +G+++ ++ ++ +G P AL+ L L A+
Sbjct: 390 IVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCAR 435
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 143/343 (41%), Gaps = 38/343 (11%)
Query: 145 NDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYT 204
N W A F + Q YE + Y + +LG K D L E M T+
Sbjct: 122 NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDV 181
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFG-VDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T ++ K+ + A + MK D +L+ K + ++LE
Sbjct: 182 YTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEM 241
Query: 264 KSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHG-FVPDVFSYNSFIESYCHDKD 321
L + ++ ++N +++G+ + F++ V+ DM E G +PDV + NS I SY + ++
Sbjct: 242 SYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 301
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
RK++ G P+ T+ I++ + GKAG + V + M+ T Y+
Sbjct: 302 MRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNI 361
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI---STACAHSREETALR------ 432
+I GKAGR++ DVF M QG+ + +TY +++ S A + ++ LR
Sbjct: 362 VIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSD 421
Query: 433 --------------------------LLKEMEERSCKPDLETY 449
L +MEER CKPD T+
Sbjct: 422 VVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITF 464
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 2/290 (0%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
AF + K+ + + + ++I K FDLV +V EM+ + T ++
Sbjct: 198 AFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTII 257
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDM-DTAALNMLMDALVKGNSVEHAHGVLLEFKSL-I 267
KAG E+ + M E G + D LN ++ + G ++ F+ + +
Sbjct: 258 DGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGV 317
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
+ +FNIL+ + + + + VM+ M++ F +YN IE++ K+D
Sbjct: 318 QPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDD 377
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
V +M G PN++TY ++ A KAG + + V ++ + +V DTPF++ +I G
Sbjct: 378 VFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYG 437
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
+AG L +++ M ++ D +T+ TMI T AH + L K+M
Sbjct: 438 QAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 79/210 (37%), Gaps = 2/210 (0%)
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
K+H + P +Y + + K + + E M G P YT ++ GK+ L
Sbjct: 136 KQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELL 195
Query: 358 SQALEVYEKMKS-HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
+A E MKS PD ++ LI K GR + +M G+ VTYNT
Sbjct: 196 DKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNT 255
Query: 417 MI-STACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
+I A EE L +E+ PD+ T +
Sbjct: 256 IIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM 315
Query: 476 DLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
+ PD+ TF++L+ K+G CS +
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSVMD 345
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 169/387 (43%), Gaps = 6/387 (1%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY-VTLYTMTKVLRRLTKAGKHEDAIAA 224
SP++++ ++ ++ + +E++E+ + EG+ V+++ + + L + +
Sbjct: 147 SPDVFDSLVRACTQNGDAQGAYEVIEQ-TRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 225 FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCR 283
++ M G + N+++ + K + + A V K + N SFN++++G C+
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 284 VRNFDQARKVMEDMK--EHGFV-PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ A +++ M FV P+ +YNS I +C +++ +M ++G N
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TY ++ A G+AG +AL + ++M S G+V +T Y+S+++ L G ++ A V
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLR 385
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
DM + + D T ++ C + + A+ +++ E+ D+ ++
Sbjct: 386 DMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDK 445
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
M LS D +F L+ G K GKL+ A ++ +I T
Sbjct: 446 KLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYN 505
Query: 521 QLVKDLEAKSMLKEKEHIEKLMTPPSI 547
+V L + M E + M I
Sbjct: 506 SIVNGLSKRGMAGAAEAVVNAMEIKDI 532
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 153/360 (42%), Gaps = 7/360 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN +I+ K+ DL + +M K T ++ +AG ++A+ M
Sbjct: 294 YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMT 353
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
G+ ++T N ++ L +E A VL + S + ++ + I++ G CR
Sbjct: 354 SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVK 413
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A + + E V D+ +N+ + + DK DQ+L M G +A+++ ++
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
K G+L +ALE+Y+ M + Y+S++ L K G A V M +
Sbjct: 474 DGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----I 529
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKP--DLETYHPXXXXXXXXXXXXXXX 466
+D+VTYNT+++ + E A +L +M+++ + L T++
Sbjct: 530 KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAK 589
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
+ M + + PD T+ L+ K + + LI +G+TP +V+ L
Sbjct: 590 EVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 4/340 (1%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKH 218
++G + + +N +I GK + L++ M + E T +++ K
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE--FKSLIPLNSGSFNI 276
E+A +M+ +GV D N L A + S A +++ + + N +
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGT 536
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
++NG+C ++A + MKE G P++F +NS I+ + + D V +V++ M E G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
P+ VT++ +M A G + + E+Y M GI PD +S L +AG + A
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 397 DVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM-EERSCKPDLETYHPXXXX 455
+ M K G+ +VV Y +IS C+ + A+++ K+M P+L TY
Sbjct: 657 QILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Query: 456 XXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSG 495
+ M ++ P T L+ G + G
Sbjct: 717 FGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
LMNG +A + + E G P + +Y + + + K F + ++ ++ +NG
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
P+ + + ++ A ++G L QA++++EKMK G P +++LI GK G+L+++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 397 DVFEDMPKQGIVR-DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXX 455
+ + M + +++ + T N ++ C + E A ++ +M+ KPD+ T++
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 456 XXXXXXXXXXX-XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M N + P++ T +V+G + GK++ A FF + G+ P
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 515 RHGALKQLVK 524
L+K
Sbjct: 565 NLFVFNSLIK 574
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 154/384 (40%), Gaps = 42/384 (10%)
Query: 165 HSPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAI 222
H P L Y ++ L + K+F + L+ ++ K+ ++ +++G + A+
Sbjct: 350 HKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAM 409
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL---LEFKSLIPLNSGSFNILMN 279
F +MKE G + N L+ K +E + +L L + L P N + NIL+
Sbjct: 410 KIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQP-NDRTCNILVQ 468
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH-DKDFRKVDQVLEEMSENGCP 338
WC R ++A ++ M+ +G PDV ++N+ ++Y D ++ M N
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVK 528
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN T ++ + G++ +AL + +MK G+ P+ ++SLI G L
Sbjct: 529 PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI-----KGFLN----- 578
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
DM G V D+ MEE KPD+ T+
Sbjct: 579 INDMDGVGEVVDL-------------------------MEEFGVKPDVVTFSTLMNAWSS 613
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGA 518
M + + PD+ FS+L G ++G+ + A ++ G+ P
Sbjct: 614 VGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVI 673
Query: 519 LKQLVKDLEAKSMLKEKEHIEKLM 542
Q++ + +K+ + K M
Sbjct: 674 YTQIISGWCSAGEMKKAMQVYKKM 697
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 11/350 (3%)
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL----- 260
TK++ L + G+ ++A + F + E G L+ AL + +H H +L
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQ---KHFHSLLSLISK 379
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
+E L P ++ FN ++N N DQA K+ E MKE G P ++N+ I+ Y
Sbjct: 380 VEKNGLKP-DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 321 DFRKVDQVLEEM-SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+ ++L+ M + PN T I++ A ++ +A + KM+S+G+ PD +
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 380 SSLIFILGKAGRLKDACD-VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
++L + G A D + M + +V T T+++ C + E ALR M+
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
E P+L ++ + M + + PD+ TFS L++ G +
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 499 HACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
+ +++ G+ P A L K ++ E I M +R
Sbjct: 619 RCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 142/292 (48%), Gaps = 9/292 (3%)
Query: 138 QILKRFNNDWVPAFGF--FTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVE--EM 193
++LK F+N P+F + + Y+ + LY LMI+ G++K +D + E++ ++
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKL 123
Query: 194 AKHEGYVT--LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGN 251
K + Y + ++ L AG+ AI M +FG + + N +++ LV
Sbjct: 124 EKRCRFSEEFFYNLMRIYGNL--AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAK 181
Query: 252 SVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYN 310
+ H + + L + +++ NIL+ G C N + A +++++ + P+V +++
Sbjct: 182 LFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFS 241
Query: 311 SFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
I +C+ F + ++LE M + P+ +T+ I++ L K G++ + +++ E+MK
Sbjct: 242 PLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK 301
Query: 371 GIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTAC 422
G P+ Y +++ L R +A ++ M G+ ++Y M+ C
Sbjct: 302 GCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 9/246 (3%)
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS-ENGCPPNAVTYTIVMFALGK-AG 355
K + P Y I + K + ++++V+ + E C + + +M G AG
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
++++A+E+ M G P + ++ ++ +L A + +F PK G+ D N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN 475
+I C E AL+LL E ++ +P++ T+ P E M K
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 476 DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV-------KDLEA 528
+ PD TF++L+ GLRK G+++ E + +G P G ++++ ++LEA
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 529 KSMLKE 534
K M+ +
Sbjct: 327 KEMMSQ 332
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%)
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
++A +++ M + G P S+N + K F ++ ++ + G +A I
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ L ++G L AL++ ++ P+ +S LI G+ ++A + E M K+
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
I D +T+N +IS R E + LL+ M+ + C+P+ TY
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR 515
M + P ++ +V GL ++ + ++++ G P+
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMK--EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
+ +++N + + + +D+ +VM +K + + F YN + ++L
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M + GC P++ ++ ++ L A + +++ G+ D + LI L ++G
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
L+ A + ++ P+Q +V+T++ +I C + E A +LL+ ME+ +PD T++
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
E M P+ GT+ +++GL + A ++IS G
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 512 LTPRHGALKQLVKDL-EAKSMLK 533
+ P + K++V L E KS+++
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVE 360
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 31/315 (9%)
Query: 128 GFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMID--ILGKSKNFDL 185
GF +NS V I R +D A F W Q GY+H+ E Y+ MI I GK NF
Sbjct: 72 GF--TNSDVV-IALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNF-- 126
Query: 186 VWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMD 245
V L+EE+ AG E ++ + + F N D
Sbjct: 127 VETLIEEVI--------------------AGACEMSVPLYNCIIRFCCGRK-FLFNRAFD 165
Query: 246 ALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
K + + L + L+ FN L C V R + + MK +G +PD
Sbjct: 166 VYNKMLRSDDSKPDLETYTLLLSSLLKRFNKL--NVCYVY-LHAVRSLTKQMKSNGVIPD 222
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
F N I++Y + + +V +EM+ G PNA TY+ ++ + + G++ Q L Y+
Sbjct: 223 TFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYK 282
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
+M+ G+VP+ Y LI L RL +A +V DM + D++TYNT+++ C
Sbjct: 283 EMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGG 342
Query: 426 REETALRLLKEMEER 440
R AL +++E ++R
Sbjct: 343 RGSEALEMVEEWKKR 357
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 65/126 (51%)
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
V + ++M NG P+ +++ A K ++ +A+ V+++M +G P+ YS L+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
+ + GR+ +++M +G+V + Y +I + R + A+ ++ +M S P
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSP 326
Query: 445 DLETYH 450
D+ TY+
Sbjct: 327 DMLTYN 332
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 179/423 (42%), Gaps = 79/423 (18%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
FF + + HS L+ +L + F + ++E++ + EG + T ++ +
Sbjct: 70 FFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDM 129
Query: 213 -----TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM----------------------- 244
++ +D++ ++MK+ +++ T + N ++
Sbjct: 130 LLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHT 189
Query: 245 -----DALVKGNSVEHAHGVLL--EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
D L + +E A L E+K + P + SFN +M+G+C++ D A+ +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP-SVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
+ G VP V+S+N I C + ++ +M+++G P++VTY I+ G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI-VRDVVTYNT 416
S A EV M G+ PD Y+ L+ + G + + +DM +G + ++ +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
M+S C R + AL L +M+ +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMK-----------------------------------ADG 393
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR---HGA----LKQLVKDLEAK 529
LSPDL +S+++HGL K GK D A ++E+ + + P HGA L Q LEA+
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 530 SML 532
S+L
Sbjct: 454 SLL 456
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 146/352 (41%), Gaps = 32/352 (9%)
Query: 166 SPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
SP+L Y+++I L K FD+ L +EM T +L L + G +A +
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL----NSGSFNILMN 279
+ G +D N+++D K +E A L FK +I + +FN L+
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA---LELFKVVIETGITPSVATFNSLIY 511
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G+C+ +N +ARK+++ +K +G P V SY + +++Y + + + +D++ EM G PP
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
VTY+++ L + + V + IF K G
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRER---------------IFEKCKQG--------L 608
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
DM +GI D +TYNT+I C A L+ M+ R+ TY+
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
+ + ++S ++ L+ G + A F +L+ RG
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 158/394 (40%), Gaps = 25/394 (6%)
Query: 151 FGFFTWAKT------QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYT 204
GF AK+ + G S +N++I+ L + EL +M KH T
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL---- 260
+ + G A R M + G+ D +L+ + +++ +L
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 261 ---LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
E S+IP + ++++G C+ D+A + MK G PD+ +Y+ I C
Sbjct: 355 SRGFELNSIIPCS-----VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTP 377
F + +EM + PN+ T+ ++ L + G L +A + + + S G D
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
Y+ +I K+G +++A ++F+ + + GI V T+N++I C A ++L +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 438 EERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
+ P + +Y M + P T+S++ GL + K
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 498 DHACSFFEELISRGLTPRHGALKQLVKDLEAKSM 531
++ E I KQ ++D+E++ +
Sbjct: 590 ENCNHVLRERIFE-------KCKQGLRDMESEGI 616
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 110/267 (41%), Gaps = 13/267 (4%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
LYN++ID KS + EL + + + ++ T ++ K +A +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCR---- 283
K +G+ + LMDA + + + E K+ IP + +++++ G CR
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 284 --------VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
R F++ ++ + DM+ G PD +YN+ I+ C K LE M
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
++ TY I++ +L G + +A ++ + Y++LI G + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTAC 422
+F + +G + Y+ +I+ C
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 179/423 (42%), Gaps = 79/423 (18%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
FF + + HS L+ +L + F + ++E++ + EG + T ++ +
Sbjct: 70 FFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDM 129
Query: 213 -----TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM----------------------- 244
++ +D++ ++MK+ +++ T + N ++
Sbjct: 130 LLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHT 189
Query: 245 -----DALVKGNSVEHAHGVLL--EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
D L + +E A L E+K + P + SFN +M+G+C++ D A+ +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP-SVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
+ G VP V+S+N I C + ++ +M+++G P++VTY I+ G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI-VRDVVTYNT 416
S A EV M G+ PD Y+ L+ + G + + +DM +G + ++ +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
M+S C R + AL L +M+ +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMK-----------------------------------ADG 393
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR---HGA----LKQLVKDLEAK 529
LSPDL +S+++HGL K GK D A ++E+ + + P HGA L Q LEA+
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 530 SML 532
S+L
Sbjct: 454 SLL 456
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 146/352 (41%), Gaps = 32/352 (9%)
Query: 166 SPEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
SP+L Y+++I L K FD+ L +EM T +L L + G +A +
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL----NSGSFNILMN 279
+ G +D N+++D K +E A L FK +I + +FN L+
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA---LELFKVVIETGITPSVATFNSLIY 511
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G+C+ +N +ARK+++ +K +G P V SY + +++Y + + + +D++ EM G PP
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
VTY+++ L + + V + IF K G
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRER---------------IFEKCKQG--------L 608
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
DM +GI D +TYNT+I C A L+ M+ R+ TY+
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
+ + ++S ++ L+ G + A F +L+ RG
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 158/394 (40%), Gaps = 25/394 (6%)
Query: 151 FGFFTWAKT------QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYT 204
GF AK+ + G S +N++I+ L + EL +M KH T
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL---- 260
+ + G A R M + G+ D +L+ + +++ +L
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 261 ---LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
E S+IP + ++++G C+ D+A + MK G PD+ +Y+ I C
Sbjct: 355 SRGFELNSIIPCS-----VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTP 377
F + +EM + PN+ T+ ++ L + G L +A + + + S G D
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
Y+ +I K+G +++A ++F+ + + GI V T+N++I C A ++L +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 438 EERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
+ P + +Y M + P T+S++ GL + K
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 498 DHACSFFEELISRGLTPRHGALKQLVKDLEAKSM 531
++ E I KQ ++D+E++ +
Sbjct: 590 ENCNHVLRERIFE-------KCKQGLRDMESEGI 616
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 110/267 (41%), Gaps = 13/267 (4%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
LYN++ID KS + EL + + + ++ T ++ K +A +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRV--- 284
K +G+ + LMDA + + + E K+ IP + +++++ G CR
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 285 ---------RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
R F++ ++ + DM+ G PD +YN+ I+ C K LE M
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
++ TY I++ +L G + +A ++ + Y++LI G + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTAC 422
+F + +G + Y+ +I+ C
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 145/340 (42%), Gaps = 40/340 (11%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL------- 260
++ R+ +G+ + + F ++ G+D D +++ AL + + E +L
Sbjct: 188 LISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISE 247
Query: 261 --------LEFKSLIPLNSGS------------FNILMN-------------GWCRVRNF 287
L F + LN + NIL++ G C
Sbjct: 248 TRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRI 307
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ A V+ DM++HG PDV+ Y++ IE + + + K V +M + N V + +
Sbjct: 308 EDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSI 367
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + G S+A +++++ + I D Y+ LGK G++++A ++F +M +GI
Sbjct: 368 LQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI 427
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
DV+ Y T+I C + A L+ EM+ PD+ Y+
Sbjct: 428 APDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFE 487
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ M + P T ++++ GL +G+LD A +F+E L
Sbjct: 488 TLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 59/276 (21%)
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRV 284
RM + GV+ + + L+ A + N+V A +L K ++P + ++ I++N +CR+
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP-DLFTYTIMINTYCRL 648
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIES----------------------------Y 316
QA + EDMK PDV +Y+ + S Y
Sbjct: 649 NEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRY 708
Query: 317 CHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM--------------FALG---------- 352
CH D +KV + ++M P+ VTYT+++ F +
Sbjct: 709 CHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLI 768
Query: 353 ----KAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
K G L +A ++++M G+ PD Y++LI K G LK+A +F+ M + G+
Sbjct: 769 DWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVK 828
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
DVV Y +I+ C + A++L+KEM E+ KP
Sbjct: 829 PDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 158/403 (39%), Gaps = 18/403 (4%)
Query: 134 SSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM 193
SS+ Q + N + A+ F + +T YN+ D LGK + EL EM
Sbjct: 365 SSILQCYCQMGN-FSEAYDLFKEFR-ETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 194 AKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSV 253
+ T ++ GK DA M G D N+L L
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLA 482
Query: 254 EHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNS 311
+ A L +E + + P + N+++ G D+A E ++ D
Sbjct: 483 QEAFETLKMMENRGVKP-TYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKG 541
Query: 312 FIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
F + C D F + ++ + P +V +T+ + +S+A ++ ++M G
Sbjct: 542 FCAAGCLDHAFERFIRLEFPL------PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLG 595
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
+ P+ Y LI + ++ A + FE + + IV D+ TY MI+T C + + A
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
L ++M+ R KPD+ TY M D+ PD+ ++++++
Sbjct: 656 ALFEDMKRRDVKPDVVTYS-------VLLNSDPELDMKREMEAFDVIPDVVYYTIMINRY 708
Query: 492 RKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
L + F+++ R + P L+K+ +++ +E
Sbjct: 709 CHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE 751
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 1/240 (0%)
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKS 265
KV+R L + EDA + M++ G+D D + +++ K ++ A V + K
Sbjct: 296 KVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK 355
Query: 266 LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKV 325
+N + ++ +C++ NF +A + ++ +E D YN ++ +
Sbjct: 356 RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEA 415
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
++ EM+ G P+ + YT ++ G+ S A ++ +M G PD Y+ L
Sbjct: 416 IELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGG 475
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
L G ++A + + M +G+ VT+N +I + A + +E +S + D
Sbjct: 476 LATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND 535
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/356 (18%), Positives = 134/356 (37%), Gaps = 30/356 (8%)
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
+V +M KH +Y + ++ K A+ F +M + ++ ++ ++
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 249 KGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
+ + A+ + EF+ I L+ +N+ + ++ ++A ++ +M G PDV
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVI 432
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
+Y + I C ++ EM G P+ V Y ++ L G +A E + M
Sbjct: 433 NYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV---------------- 411
++ G+ P ++ +I L AG L A +E + + D
Sbjct: 493 ENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAF 552
Query: 412 ------------VTYNTMISTACAHSRE-ETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
Y T+ ++ CA A LL M + +P+ Y
Sbjct: 553 ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
E + + PDL T++++++ + + A + FE++ R + P
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP 668
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 170/463 (36%), Gaps = 30/463 (6%)
Query: 116 SPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMID 175
S ++ D ++++ V ++L +D A F + S + Y +I
Sbjct: 40 SEQVKEGTFDYKALELNDIGVLRVLNSMKDDPYLALSFLKRIEGNVTLP-SVQAYATVIR 98
Query: 176 IL---GKSKNFD-LVWELVEEMAKHEGYV-------------TLYTMTKVLRRLTKAGKH 218
I+ G K D ++ELV + G+ +L + +V L KA +
Sbjct: 99 IVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYAN 158
Query: 219 EDAIAA-----FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSG 272
D FR G D ALN L+ ++ + G E + L + ++
Sbjct: 159 LDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAH 218
Query: 273 SFNILMNGWCRVRNFDQARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++ +++ R + ++ K++ + P VF Y +FIE C ++ +L+
Sbjct: 219 TYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVF-YLNFIEGLCLNQMTDIAYFLLQP 277
Query: 332 MSENGCPPN----AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
+ + + + Y V+ L ++ A V M+ HGI PD YS++I
Sbjct: 278 LRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHR 337
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
K + A DVF M K+ + V ++++ C A L KE E + D
Sbjct: 338 KNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV 397
Query: 448 TYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
Y+ M ++PD+ ++ L+ G GK A E+
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM 457
Query: 508 ISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIRFT 550
G TP L L + +E K+M ++ T
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPT 500
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
+ +L++ C++ + +A+++ + M E G PD Y + I C ++ + + M
Sbjct: 764 YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMI 823
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
E+G P+ V YT ++ + G + +A+++ ++M GI P S++ + KA L+
Sbjct: 824 ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKGLR 883
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 8/189 (4%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y +MI+ + V+ L ++M + E + T T +L+ K E ++ R MK
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKPERNLS--REMK 753
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFD 288
F V D +L+D K + A + + +S + ++ + L+ C++
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLK 813
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A+ + + M E G PDV Y + I C + K ++++EM E G P + + V
Sbjct: 814 EAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVH 873
Query: 349 FALGKAGQL 357
+A KA L
Sbjct: 874 YAKLKAKGL 882
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 148/342 (43%), Gaps = 29/342 (8%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
+Y V+ R K +A+ +M G+ ++ +++++ K + A
Sbjct: 318 VYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFK 377
Query: 262 EFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
EF+ + I L+ +N+ + ++ ++A +++++MK+ G VPDV +Y + I+ YC
Sbjct: 378 EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQG 437
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+++EM NG P+ +TY +++ L + G + LE+YE+MK+ G P+ S
Sbjct: 438 KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNS 497
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQ---------------GIVRDVV------------- 412
+I L A ++K+A D F + ++ G+ +
Sbjct: 498 VIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKS 557
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
Y + + C E A +LK+M +P + M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ L PDL T+++++H + +L A S FE++ RG+ P
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 153/366 (41%), Gaps = 46/366 (12%)
Query: 175 DILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVD 234
D+L +SK D V V + ++ R+T+ GK + F+++K+ G+
Sbjct: 167 DVLFQSKRLDCV-------------VDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLC 213
Query: 235 MDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNS----------------------- 271
+ +++ AL + ++E A +L+E +S+ +
Sbjct: 214 ANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELID 273
Query: 272 ----------GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
+++ G+C A V+ +M+E GF DV++ + I+ YC + +
Sbjct: 274 RKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMN 333
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
+ L++M G N V ++++ K +ALE +++ + I D Y+
Sbjct: 334 LPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNV 393
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
L K GR+++A ++ ++M +GIV DV+ Y T+I C + AL L+ EM
Sbjct: 394 AFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG 453
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
PDL TY+ E M P+ T S+++ GL + K+ A
Sbjct: 454 MSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Query: 502 SFFEEL 507
FF L
Sbjct: 514 DFFSSL 519
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 23/369 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
YN+ D L K + +EL++EM K G V + T ++ GK DA+ M
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEM-KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEM 449
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL-NSGSFNILMNGWCRVRNF 287
G+ D N+L+ L + E + K+ P N+ + ++++ G C R
Sbjct: 450 IGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKV 509
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+A +++ P+ + SF++ YC +K + + P Y +
Sbjct: 510 KEAEDFFSSLEQK--CPE--NKASFVKGYCEAGLSKKAYKAFVRLEY---PLRKSVYIKL 562
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
F+L G L +A +V +KM ++ + P +I K +++A +F+ M ++G+
Sbjct: 563 FFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY-------------HPXXX 454
+ D+ TY MI T C + + A L ++M++R KPD+ TY H
Sbjct: 623 IPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETC 682
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ D+ +++L+ K L+ A F+ +I GL P
Sbjct: 683 SVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 515 RHGALKQLV 523
A L+
Sbjct: 743 DMVAYTTLI 751
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
++ +C++ N +A+ + + M E G +PD+F+Y I +YC + +K + + E+M + G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 337 CPPNAVTYTIVM--------------FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
P+ VTYT+++ G+ G+ +A EV + + GI D Y+ L
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK-RKASEVLREFSAAGIGLDVVCYTVL 715
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
I K L+ A ++F+ M G+ D+V Y T+IS+ + A+ L+ E+ ++
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSL 266
V+R K + A + M+E G +D A ++D K ++ A G L +
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG 348
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD 326
+ +N ++++ +C++ +A + ++ ++ D YN ++ +
Sbjct: 349 LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAF 408
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
++L+EM + G P+ + YT ++ G++ AL++ ++M +G+ PD Y+ L+ L
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 387 GKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
+ G ++ +++E M +G + VT + +I C + + A +E++
Sbjct: 469 ARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 175/414 (42%), Gaps = 33/414 (7%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+TG+ S Y ++ + K + + +V E+ + + V+ +++G E
Sbjct: 73 ETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNME 132
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL---LEFKSL-IPLNSGSFN 275
DA+ A +MKE G++ T+ N L+ E + +L LE ++ + N +FN
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD-FRKVDQVLEEMS- 333
+L+ WC+ + ++A +V++ M+E G PD +YN+ Y + R +V+E+M
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI--FI------ 385
+ PN T IV+ + G++ L +MK + + ++SLI F+
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 386 -----------------LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
+ G K V M + + DV+TY+T+++ + E
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 429 TALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A ++ KEM + KPD Y E + P++ F+ ++
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVI 431
Query: 489 HGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKD-LEAKSMLKEKEHIEKL 541
G +G +D A F ++ G++P + L+ LE K K +E ++ +
Sbjct: 432 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 485
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 149/374 (39%), Gaps = 40/374 (10%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV----TLYTMTKVLRRLTKAGK 217
G + YN +I G + + EL++ M EG V + T +++ K K
Sbjct: 145 GLNPTTSTYNTLIKGYGIAGKPERSSELLDLML-EEGNVDVGPNIRTFNVLVQAWCKKKK 203
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE---FKSLIPLNSGSF 274
E+A ++M+E GV DT N + V+ A ++E K N +
Sbjct: 204 VEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC 263
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVD-------- 326
I++ G+CR + + MKE ++ +NS I + D +D
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLL 323
Query: 327 -----------------QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS 369
QVL M E + +TY+ VM A AG + +A +V+++M
Sbjct: 324 MSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 383
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR---DVVTYNTMISTACAHSR 426
G+ PD YS L +A K A ++ E + IV +VV + T+IS C++
Sbjct: 384 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETL----IVESRPNVVIFTTVISGWCSNGS 439
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ A+R+ +M + P+++T+ + M + P+ TF L
Sbjct: 440 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 499
Query: 487 LVHGLRKSGKLDHA 500
L R +G D +
Sbjct: 500 LAEAWRVAGLTDES 513
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A+ V + + E G P + SY + + + K + + ++ E+ ++G +++ + V+
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A ++G + A++ KMK G+ P T Y++LI G AG+ + + ++ + M ++G V
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 409 R---DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX--XXXXXXXXX 463
++ T+N ++ C + E A ++K+MEE +PD TY+
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ + K P+ T ++V G + G++ F +
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N ++++G K V L++E +T T V+ + AG E A F+ M
Sbjct: 326 FNEEVELVGNQKMKVQVLTLMKECNVKADVITYST---VMNAWSSAGYMEKAAQVFKEMV 382
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
+ GV D A ++L V+ + A +L N F +++GWC + D
Sbjct: 383 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDD 442
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A +V M + G P++ ++ + + Y K K ++VL+ M G P T+ ++
Sbjct: 443 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAE 502
Query: 350 ALGKAGQLSQALEVYEKMKSHGI 372
A AG ++ + +K I
Sbjct: 503 AWRVAGLTDESNKAINALKCKDI 525
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 19/299 (6%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLR------RLTKAGKHEDAI 222
++N +ID + FD ++ M + + T T V+R K K +
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL----NSGSFNILM 278
F M+ + D A N+++ L K + +E A F +LI + ++N ++
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF---FNNLIEGKMEPDIVTYNTMI 614
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
G+C +R D+A ++ E +K F P+ + I C + D ++ M+E G
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PNAVTY +M K+ + + +++E+M+ GI P YS +I L K GR+ +A ++
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD------LETYHP 451
F ++ DVV Y +I C R A L + M KPD L Y+P
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNP 793
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 165/420 (39%), Gaps = 19/420 (4%)
Query: 120 VAQALDGH------GFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLM 173
V +ALD H GF+V S ++LK + D + G + + +
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 174 IDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGV 233
I+ K D ++L + M + L + ++ KAG F + GV
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 234 DMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL----IPLNSGSFNILMNGWCRVRNFDQ 289
+D + +D VK + A V +K + I N ++ IL+ G C+ +
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVV---YKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A + + + G P + +Y+S I+ +C + R + E+M + G PP+ V Y +++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
L K G + A+ KM I + ++SLI + R +A VF M GI
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 410 DVVTYNTMISTA------CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
DV T+ T++ + C H + L+L M+ D+ +
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
++ + + PD+ T++ ++ G +LD A FE L P L L+
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 155/387 (40%), Gaps = 42/387 (10%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y ++I L + + + ++ K ++ T + ++ K G A + M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFD 288
+ G D +L+D L K + HA ++ I LN FN L++GWCR+ FD
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFI------ESYC-HDK--------DFRKVDQVLEEMS 333
+A KV M +G PDV ++ + + +++C H K D + +++ +++
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIA 573
Query: 334 --------------------------ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
E P+ VTY ++ +L +A ++E +
Sbjct: 574 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
K P+T + LI +L K + A +F M ++G + VTY ++
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
E + +L +EM+E+ P + +Y L PD+ +++L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTP 514
+ G K G+L A +E ++ G+ P
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/443 (19%), Positives = 176/443 (39%), Gaps = 66/443 (14%)
Query: 127 HGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLV 186
+G + + +L ++ A +F WA+ P Y + +L ++ FD+
Sbjct: 63 YGSNLQRNETNLVLLSLESEPNSALKYFRWAEISG---KDPSFYTIA-HVLIRNGMFDVA 118
Query: 187 WELVEEMAKHEG--YVTLYTMTK----------VLRRLTKAGKHEDAIAAFRRMKEFGVD 234
++ +EM + G + L ++ ++ + G + A+ F + GV
Sbjct: 119 DKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVV 178
Query: 235 MDTAALNMLMDALVKGNSVEHA--HGVLLEFKSLIPLNSGSFNILMNG-WCR---VRNFD 288
+ ++ ++++L+ + V+ H L + P + +++ +C+ + D
Sbjct: 179 IPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALD 238
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
R VME GF + S N ++ D+ ++L + + G PN VT+ ++
Sbjct: 239 FHRLVME----RGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLI 293
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
K G++ +A ++++ M+ GI PD YS+LI KAG L +F +G+
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
DVV +++ I TA + K
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYK--------------------------------- 380
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL-- 526
M +SP++ T+++L+ GL + G++ A + +++ RG+ P L+
Sbjct: 381 --RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 527 --EAKSMLKEKEHIEKLMTPPSI 547
+S E + K+ PP +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDV 461
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 34/297 (11%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM--AKHEGYVTLYTMTK 207
F F WA Q + H Y++ I LG +K + + ++V ++ +H G LY
Sbjct: 155 CFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYN--S 212
Query: 208 VLRRLTKAGKHEDAIAAFRRM---KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK 264
++ TKAGK A+ FR M K ++L AL+ + + + V +E
Sbjct: 213 IIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYME-- 270
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
R + M + G PDVF+ N ++ Y
Sbjct: 271 ------------------------TVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVND 306
Query: 325 VDQVLEEMSE-NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
++ +MS C PN+ TY ++ L G+ A E+ +MK G VP+ Y+SL+
Sbjct: 307 ALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLV 366
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
+G + DA +M + G V D ++Y T++ +C + + A RLL+ + E+
Sbjct: 367 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 46/425 (10%)
Query: 150 AFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVL 209
A FF W + H + + MI +LG+ + ++ +M + ++
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 210 RRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVK---------------GNSVE 254
KAG ++++ F++MK+ GV+ + N L +++ VE
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 255 ---HAHGVLLE--FKSL----------------IPLNSGSFNILMNGWCRVRNFDQARKV 293
H + ++L F SL I + +FN ++NG+CR + D+A K+
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
+MK + P V SY + I+ Y ++ EEM +G PNA TY+ ++ L
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Query: 354 AGQLSQALEVYEKMKSHGIVP-DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV 412
AG++ +A + + M + I P D + L+ KAG + A +V + M + +
Sbjct: 373 AGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAG 432
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSC----KPDLE----TYHPXXXXXXXXXXXXX 464
Y +I C S A++LL + E+ + LE Y+P
Sbjct: 433 HYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAK 492
Query: 465 XXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ K + D + L+ G K G D + + + RG+ A + L+K
Sbjct: 493 AEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIK 551
Query: 525 DLEAK 529
+K
Sbjct: 552 SYMSK 556
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 144/335 (42%), Gaps = 43/335 (12%)
Query: 215 AGKHEDAIAAFRRMKEFGV---DMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLN 270
A K E A+ FR + G+ D DT ++ L + + + HA +LL+ + +P +
Sbjct: 127 AKKLEHALQFFRWTERSGLIRHDRDTHM--KMIKMLGEVSKLNHARCILLDMPEKGVPWD 184
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
F +L+ + + ++ K+ + MK+ G + SYNS + + +
Sbjct: 185 EDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFN 244
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
+M G P TY ++++ + +L AL +E MK+ GI PD ++++I +
Sbjct: 245 KMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFK 304
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
++ +A +F +M I VV+Y TMI A R + LR+ +EM +P+ TY
Sbjct: 305 KMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY- 363
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
S L+ GL +GK+ A + + ++++
Sbjct: 364 ----------------------------------STLLPGLCDAGKMVEAKNILKNMMAK 389
Query: 511 GLTPRHGA--LKQLVKDLEAKSMLKEKEHIEKLMT 543
+ P+ + LK LV +A M E ++ + T
Sbjct: 390 HIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMAT 424
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVP-DTPFYSSLIFILGKAGRLKDACDVFEDM 402
+++V L A +L AL+ + + G++ D + +I +LG+ +L A + DM
Sbjct: 117 HSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDM 176
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
P++G+ D + +I + + ++++ ++M++ + +++Y+
Sbjct: 177 PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRY 236
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
M + P T++L++ G S +L+ A FFE++ +RG++P +
Sbjct: 237 MMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTM 296
Query: 523 V 523
+
Sbjct: 297 I 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 142/361 (39%), Gaps = 15/361 (4%)
Query: 193 MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS 252
MAKH K+L +KAG A + M V + +L++ K ++
Sbjct: 387 MAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASA 446
Query: 253 VEHA---------HGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFV 303
A ++L + + + ++N ++ C +A + + + G V
Sbjct: 447 YNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG-V 505
Query: 304 PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV 363
D + N+ I + + + ++L+ MS G P + Y +++ + G+ A
Sbjct: 506 QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 364 YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ--GIVRDVVTYNTMISTA 421
+ M G VPD+ + S+I L + GR++ A V M + GI ++ ++
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEAL 625
Query: 422 CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDL 481
E AL + + + DL++ + + DLS +
Sbjct: 626 LMRGHVEEALGRIDLLNQNGHTADLDSL---LSVLSEKGKTIAALKLLDFGLERDLSLEF 682
Query: 482 GTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKL 541
++ ++ L +GK +A S +++ +G + + +L+K L + K+ + + ++
Sbjct: 683 SSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADVLSRM 742
Query: 542 M 542
+
Sbjct: 743 I 743
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 145/347 (41%), Gaps = 35/347 (10%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
LYN+ + + KSK+ + +L +EM + T T ++ + G + A+ F +M
Sbjct: 177 LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFD 288
FG + D + ++DA + R N D
Sbjct: 237 SSFGCEPDNVTMAAMIDA----------------------------------YGRAGNVD 262
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A + + + + D ++++ I Y ++ + EEM G PN V Y ++
Sbjct: 263 MALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLI 322
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
++G+A + QA +Y+ + ++G P+ Y++L+ G+A DA ++ +M ++G+
Sbjct: 323 DSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLS 382
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEE-RSCKPDLETYHPXXXXXXXXXXXXXXXX 467
V+ YNT++S + + A + ++M+ +C PD T+
Sbjct: 383 LTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEA 442
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + P L + ++ K+ ++D F++++ G+TP
Sbjct: 443 ALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 135/310 (43%), Gaps = 18/310 (5%)
Query: 111 KEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELY 170
K+ S +L + L+ G + N++ I+ + VP W + + + P+
Sbjct: 189 KDLEKSEKLFDEMLE-RGIKPDNATFTTIISCARQNGVPKRAV-EWFEKMSSFGCEPDNV 246
Query: 171 NL--MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+ MID G++ N D+ L + + + T + ++R +G ++ + + M
Sbjct: 247 TMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLI----PLNSGSFNILMNGWCRV 284
K GV + N L+D++ + A + +K LI N ++ L+ + R
Sbjct: 307 KALGVKPNLVIYNRLIDSMGRAKRPWQAKII---YKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE----NGCPPN 340
R D A + +MKE G V YN+ + S C D R VD+ E + C P+
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADN--RYVDEAFEIFQDMKNCETCDPD 420
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
+ T++ ++ +G++S+A +M+ G P +S+I GKA ++ D F+
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 480
Query: 401 DMPKQGIVRD 410
+ + GI D
Sbjct: 481 QVLELGITPD 490
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
+V YN ++ + KD K +++ +EM E G P+ T+T ++ + G +A+E +
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 365 EKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAH 424
EKM S G PD +++I G+AG + A +++ + D VT++T+I
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 425 SREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTF 484
+ L + +EM+ KP+L Y+ + + N +P+ T+
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 485 SLLVHGLRKSGKLDHACSFFEELISRGLT 513
+ LV ++ D A + + E+ +GL+
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLS 382
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 169/399 (42%), Gaps = 41/399 (10%)
Query: 166 SPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF 225
S +L N+ ++ L K +N + L+ + + + T +++ T+ ++A A
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 226 RRMKEFGVDMDTAALNMLMDALVKG---NSV-----EHAHGVL----------------- 260
RRM+E G++ D N L+ K N V E H L
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 261 -------------LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
+ L+P ++NIL++ C+ + D A ++ + +K P++
Sbjct: 132 GRHGEAFKILHEDIHLAGLVP-GIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELM 189
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
+YN I C + VD ++ E+ ++G PNAVTYT ++ K ++ + L+++ KM
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI-VRDVVTYNTMISTACAHSR 426
K G D +++ L K GR ++A + ++ + G +D+V+YNT+++
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ LL+E+E + KPD T+ + + + P + T +
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNC 369
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKD 525
L+ GL K+G +D A F + R + L KD
Sbjct: 370 LIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKD 408
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 3/279 (1%)
Query: 235 MDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL-NSGSFNILMNGWCRVRNFDQARKV 293
+ T LN+ +++L K ++E A +L++ L L + ++N L+ G+ R D+A V
Sbjct: 11 ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAV 70
Query: 294 MEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGK 353
M+E G PDV +YNS I + +V Q+ +EM +G P+ +Y +M K
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Query: 354 AGQLSQALEV-YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVV 412
G+ +A ++ +E + G+VP Y+ L+ L K+G +A ++F+ + K + +++
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELM 189
Query: 413 TYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM 472
TYN +I+ C R + +++E+++ P+ TY M
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 473 FKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
K + D +V L K+G+ + A EL+ G
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 167 PEL--YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIA 223
PEL YN++I+ L KS+ V ++ E+ K GY T T +L+ K + E +
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMREL-KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQ 244
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCR 283
F +MK+ G D A ++ AL+K E A+ + E
Sbjct: 245 LFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL-------------------- 284
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
VR+ +++ D+ SYN+ + Y D + VD +LEE+ G P+ T
Sbjct: 285 VRSGTRSQ-------------DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT 331
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
+TI++ L G A + + G+ P + LI L KAG + A +F M
Sbjct: 332 HTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLL 434
VRD TY +++ C R A +LL
Sbjct: 392 ----VRDEFTYTSVVHNLCKDGRLVCASKLL 418
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 35/317 (11%)
Query: 130 QVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWEL 189
+++ V+ +L F W A+ FF WA Q GY + YN M IL +++ + L
Sbjct: 70 ELNTKVVETVLNGFKR-WGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKAL 128
Query: 190 VEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA-ALNMLMDALV 248
V ++ +++ +R L AG ++A + F R++E G+ + A N L++A+
Sbjct: 129 VVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAIS 188
Query: 249 KGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFS 308
K NS S ++ +AR +++M++ GF D F+
Sbjct: 189 KSNS-------------------SSVELV-----------EAR--LKEMRDCGFHFDKFT 216
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
++ YC+ + V E+ G ++ TI++ + K GQ+ +A E+ E ++
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLE 275
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
I + Y LI K R+ A +FE M + G+ D+ Y+ +I C H E
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLE 335
Query: 429 TALRLLKEMEERSCKPD 445
AL L E++ PD
Sbjct: 336 MALSLYLEIKRSGIPPD 352
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 134/323 (41%), Gaps = 41/323 (12%)
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
K+++P +S S +I++N + D A ++ D+ ++G +P YN+ IE C +
Sbjct: 433 KAILP-DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ ++L EM + G P+ T + L + AL++ +KM+ +G P + L+
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 384 FILGKAGRLKDAC-----------------------------------DVFEDMPKQGIV 408
L + GR DAC ++F D+ G
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
DV+ Y+ +I C R A L EM + KP + TY+
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL-- 526
M++++ +PD+ T++ L+HGL SG+ A + E+ + P L++ L
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 527 ---EAKSMLKEKEHIEKLMTPPS 546
++++ +E EK M P S
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDS 754
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 178/452 (39%), Gaps = 78/452 (17%)
Query: 150 AFGFFTWAKTQTG--------YEHSPEL---------YNLMIDILGKSKN--FDLVWELV 190
AFGFF G ++ E+ YN +++ + KS + +LV +
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARL 202
Query: 191 EEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKG 250
+EM + +T+T VL+ GK E A++ F + G +D +L+ + K
Sbjct: 203 KEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKW 261
Query: 251 NSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFS 308
V+ A + +LE + I LN ++ +L++G+ + D+A ++ E M+ G D+
Sbjct: 262 GQVDKAFELIEMLEERD-IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIAL 320
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV----- 363
Y+ I C KD + E+ +G PP+ ++ + + +LS+ EV
Sbjct: 321 YDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDI 380
Query: 364 -----------------------------------YEK---------MKSH--GIVPDTP 377
YE +K H I+PD+
Sbjct: 381 DKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSD 440
Query: 378 FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
S +I L KA ++ A + D+ + G++ + YN +I C R E +L+LL EM
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 438 EERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
++ +P T + + M P + + LV L ++G+
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRA 560
Query: 498 DHACSFFEELISRG----LTPRHGALKQLVKD 525
AC + +++ G + A+ L+K+
Sbjct: 561 VDACKYLDDVAGEGFLGHMVASTAAIDGLIKN 592
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 145/347 (41%), Gaps = 5/347 (1%)
Query: 171 NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKE 230
+++I+ L K+ D+ L+ ++ ++ ++ + K G+ E+++ MK+
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD 502
Query: 231 FGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIP-LNSGSFNILMNGWCRVRNF 287
GV+ LN + L + A +L + F P + +F L+ C
Sbjct: 503 AGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF--LVKKLCENGRA 560
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
A K ++D+ GF+ + + + I+ ++ + ++ ++ NG P+ + Y ++
Sbjct: 561 VDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 620
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ AL KA + +A ++ +M S G+ P Y+S+I K G + M +
Sbjct: 621 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 680
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
DV+TY ++I CA R A+ EM+ + C P+ T+
Sbjct: 681 NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALV 740
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + ++ PD + LV S ++ F E++ +G P
Sbjct: 741 YFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 1/292 (0%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
Q G P +YN +I+ + K + +L+ EM + +T+ + L +
Sbjct: 466 VQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDF 525
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLN-SGSFNIL 277
A+ ++M+ +G + L+ L + A L + L +
Sbjct: 526 VGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAA 585
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC 337
++G + D+ ++ D+ +G PDV +Y+ I++ C + D + EM G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACD 397
P TY ++ K G++ + L +M PD Y+SLI L +GR +A
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
+ +M + + +T+ +I C AL +EMEE+ +PD Y
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 4/227 (1%)
Query: 197 EGYVT-LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEH 255
EG++ + T + L K + + FR + G D A ++L+ AL K
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 256 AHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFI 313
A + E K L P ++N +++GWC+ D+ + M E PDV +Y S I
Sbjct: 633 ADILFNEMVSKGLKP-TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV 373
C + EM C PN +T+ ++ L K G +AL + +M+ +
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
PD+ Y SL+ + + +F +M +G V N M++
Sbjct: 752 PDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAV 798
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 153/352 (43%), Gaps = 11/352 (3%)
Query: 170 YNLMIDILGKSKNFDL---VWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFR 226
+N+++ + S++ + V LV+E + LYT ++ K+GK + F
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQE-SGMTADCKLYTT--LISSCAKSGKVDAMFEVFH 526
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNGWCRV 284
+M GV+ + L+D + V A G +L K++ P + FN L++ +
Sbjct: 527 QMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKP-DRVVFNALISACGQS 585
Query: 285 RNFDQARKVMEDMKE--HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
D+A V+ +MK H PD S + +++ C+ + +V + + + G
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
YTI + + K+G A +Y+ MK + PD F+S+LI + G A L +A + +D
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
QGI ++Y++++ C + AL L ++++ +P + T +
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ + L P+ T+S+L+ + + + + G++P
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSP 817
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 38/325 (11%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
++G +LY +I KS D ++E+ +M+ L+T ++ +AG+
Sbjct: 495 ESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVA 554
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLI-PLNSGSFNI-- 276
A A+ ++ V D N L+ A + +V+ A VL E K+ P++ +I
Sbjct: 555 KAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGA 614
Query: 277 LMNGWCRVRNFDQARKVME-----------------------------------DMKEHG 301
LM C ++A++V + DMKE
Sbjct: 615 LMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKD 674
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
PD +++ I+ H K + +L++ G ++Y+ +M A A +AL
Sbjct: 675 VTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKAL 734
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
E+YEK+KS + P ++LI L + +L A + +++ G+ + +TY+ ++ +
Sbjct: 735 ELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLAS 794
Query: 422 CAHSREETALRLLKEMEERSCKPDL 446
E + +LL + + P+L
Sbjct: 795 ERKDDFEVSFKLLSQAKGDGVSPNL 819
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 10/307 (3%)
Query: 211 RLTKAGKHEDAIAAFRRMKEFGV-DMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPL 269
RL + G+ +D I+ + + + DMD A K +V+ A F LI L
Sbjct: 409 RLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEA----FRFTKLI-L 463
Query: 270 NS--GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
N +FN+LM+ ++ + AR V+ ++E G D Y + I S + +
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
V +MS +G N T+ ++ +AGQ+++A Y ++S + PD +++LI G
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 388 KAGRLKDACDVFEDMPKQG--IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
++G + A DV +M + I D ++ ++ C + E A + + + + +
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT 643
Query: 446 LETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
E Y + M + D++PD FS L+ + LD A +
Sbjct: 644 PEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQ 703
Query: 506 ELISRGL 512
+ S+G+
Sbjct: 704 DAKSQGI 710
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 101/251 (40%), Gaps = 28/251 (11%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G +PE+Y + ++ KS ++D + ++M + + + ++ A ++A
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMN 279
+ K G+ + T + + LM A + A + + KS L P S + N L+
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIS-TMNALIT 757
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
C +A + ++++K G P+ +Y+ + + DF ++L + +G P
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSP 817
Query: 340 NAVTYT-------------------IVMFALGKAGQL-----SQALEVYEKMKSHGIVPD 375
N + +V F G+ Q+ S AL VY + S G VP
Sbjct: 818 NLIMCRCITSLCKRRFEKACAGGEPVVSFKSGRP-QIENKWTSMALMVYRETISGGTVPT 876
Query: 376 TPFYSSLIFIL 386
T S ++ L
Sbjct: 877 TEVVSQVLGCL 887
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 10/308 (3%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL 261
L +L K G+ + A FRRM+E D A N ++ A + E A ++
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRE----RDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 262 EF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
E K I ++NIL+ G+ ++ D A +M+ M+ G DVF++ + I H+
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ + +M G PNAVT + A ++Q EV+ G + D +
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
SL+ + K G+L+DA VF+ + +DV T+N+MI+ C A L M++
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDH 499
+ +P++ T++ + M K+ + + T++L++ G ++GK D
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 500 ACSFFEEL 507
A F ++
Sbjct: 508 ALELFRKM 515
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 154/374 (41%), Gaps = 47/374 (12%)
Query: 188 ELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDT---------- 237
ELV+EM K L T ++ + GK + A+ ++M+ FG+ D
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 238 -------AALNMLMDALVKG---NSVEHAHGVLLEFKSLIPLNSGS-------------- 273
AL+M + G N+V V L +N GS
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV-SACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 274 ---FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
N L++ + + + ARKV + +K DV+++NS I YC K ++
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP-DTPFYSSLIFILGKA 389
M + PN +T+ ++ K G +A++++++M+ G V +T ++ +I +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
G+ +A ++F M + + VT +++ ACA+ ++++E+ + +L+
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLP-ACANL---LGAKMVREIHGCVLRRNLDAI 558
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
H +F + D+ T++ L+ G G A + F ++ +
Sbjct: 559 HAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKT 618
Query: 510 RGLTPRHGALKQLV 523
+G+TP G L ++
Sbjct: 619 QGITPNRGTLSSII 632
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HG 258
L+T + ++ ++ + + FR M + GV D ++ VE H
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 259 VLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
V+++ L N ++ + + D A K M+E DV ++NS + +YC
Sbjct: 206 VVIKLGMSSCLRVS--NSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQ 259
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
+ + ++++EM + G P VT+ I++ + G+ A+++ +KM++ GI D
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
++++I L G A D+F M G+V + VT + +S AC+
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS-ACS 363
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 34/279 (12%)
Query: 154 FTWAKTQTGYEHSP------ELYNLMID-------------ILGKSKNFDL--VWELVEE 192
+TW TGY + EL+ M D I G KN D +L +
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 193 MAKHEGYVTLYTMT--KVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDA---L 247
M K +G V T T ++ + GK ++A+ FR+M+ ++ + L+ A L
Sbjct: 479 MEK-DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 248 VKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
+ V HG +L ++L +++ N L + + + + + +R + M+ D+
Sbjct: 538 LGAKMVREIHGCVLR-RNLDAIHAVK-NALTDTYAKSGDIEYSRTIFLGME----TKDII 591
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV-YEK 366
++NS I Y + + +M G PN T + ++ A G G + + +V Y
Sbjct: 592 TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSI 651
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+ I+P S+++++ G+A RL++A ++M Q
Sbjct: 652 ANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQ 690
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 138/282 (48%), Gaps = 3/282 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+++++ + K+ + + ++E M + + V +Y +LR K + + R+
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRI 655
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNF 287
++ G+ + N +++ + ++ G E + N+ +FN+L++ + + + F
Sbjct: 656 RKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLF 715
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ ++ K HG V DV SYN+ I +Y +KD+ + ++ M +G + Y +
Sbjct: 716 KKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTL 774
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ A GK Q+ + + ++MK PD Y+ +I I G+ G + + DV +++ + G+
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
D+ +YNT+I E A+ L+KEM R+ PD TY
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 141/307 (45%), Gaps = 2/307 (0%)
Query: 139 ILKRFNN-DWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAK-H 196
ILKR + A FF W + + Y+L++ +LG+ + +D +L++E+ H
Sbjct: 145 ILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFH 204
Query: 197 EGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA 256
E + V+ TK G + A F M EFGV + A + MLM K +VE A
Sbjct: 205 EFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEA 264
Query: 257 HGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
+ + +++ ++ + R+R +D+A +V++ MK+ + ++ + +Y
Sbjct: 265 EFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAY 324
Query: 317 CHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDT 376
+ +L M G PN + Y ++ GK ++ A ++ ++ + G+ PD
Sbjct: 325 SQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
Y S+I G+A ++A ++++ + G + T+I+ + + A++ +++
Sbjct: 385 TSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIED 444
Query: 437 MEERSCK 443
M C+
Sbjct: 445 MTGIGCQ 451
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 101/198 (51%)
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWC 282
F M +G +T N+L+D K + + + L K ++ S+N ++ +
Sbjct: 685 GTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYG 744
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ +++ +++M+ GF + +YN+ +++Y DK K +L+ M ++ P+
Sbjct: 745 KNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHY 804
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
TY I++ G+ G + + +V +++K G+ PD Y++LI G G +++A + ++M
Sbjct: 805 TYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Query: 403 PKQGIVRDVVTYNTMIST 420
+ I+ D VTY +++
Sbjct: 865 RGRNIIPDKVTYTNLVTA 882
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 144/363 (39%), Gaps = 38/363 (10%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
LY+L+I +S ++ + + + L+ + ++ T G+ +A + +
Sbjct: 525 LYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNL 584
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL---EFKSLIP----------------- 268
K GV +D ++++ VK S+E A VL E K ++P
Sbjct: 585 KSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDL 644
Query: 269 -----------------LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNS 311
N +N ++N R D+ E+M +GF P+ ++N
Sbjct: 645 QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNV 704
Query: 312 FIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
++ Y K F+KV+++ +G + ++Y ++ A GK + + M+ G
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDG 763
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
Y++L+ GK +++ + + M K D TYN MI+ +
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
+LKE++E PDL +Y+ + M ++ PD T++ LV L
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Query: 492 RKS 494
R++
Sbjct: 884 RRN 886
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 35/246 (14%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ + +N+++D+ GK+K F V EL +AK G V + + +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRHGVVDVISYNTI------------- 739
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGW 281
IAA+ + K++ +M +A NM D V LE ++N L++ +
Sbjct: 740 IAAYGKNKDY-TNMSSAIKNMQFDGF----------SVSLE----------AYNTLLDAY 778
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNA 341
+ + ++ R +++ MK+ PD ++YN I Y +V VL+E+ E+G P+
Sbjct: 779 GKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDL 838
Query: 342 VTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
+Y ++ A G G + +A+ + ++M+ I+PD Y++L+ L + +A
Sbjct: 839 CSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLW 898
Query: 402 MPKQGI 407
M + GI
Sbjct: 899 MKQMGI 904
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 130/314 (41%), Gaps = 22/314 (7%)
Query: 235 MDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNS--------------GSF---NIL 277
++ +++ A+ G S+EH +G+L +S N+ G+F +++
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180
Query: 278 MNGWCRVRNFDQARKVMEDMKE-HGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
+ R +D+A +++++ H F +N+ I + + + + M E G
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
PN T ++M K + +A + M+ GIV ++ YSS+I I + RL D
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMITIYTRL-RLYDKA 298
Query: 397 DVFEDMPKQGIVR-DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXX 455
+ D+ KQ VR + + M++ + E A +L ME P++ Y+
Sbjct: 299 EEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITG 358
Query: 456 XXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR 515
+ L PD ++ ++ G ++ + A +++EL G P
Sbjct: 359 YGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPN 418
Query: 516 HGALKQLVKDLEAK 529
L L+ +L+AK
Sbjct: 419 SFNLFTLI-NLQAK 431
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 162/428 (37%), Gaps = 28/428 (6%)
Query: 97 ENKHDYVEAISTLLKEHHSSPELVA--QALDGHGFQVSNSSVQQILKRFNNDWVPAFGFF 154
+ K + E+I ++ SP ++A + G+G + Q + R N
Sbjct: 327 QGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCN--------- 377
Query: 155 TWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLT 213
G E Y MI+ G++ N++ +E+ K GY + + ++
Sbjct: 378 ------IGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL-KRCGYKPNSFNLFTLINLQA 430
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL-EFKSLIPLNSG 272
K G + AI M G ++ L +++ A K ++ VL F + I LN
Sbjct: 431 KYGDRDGAIKTIEDMTGIGCQY-SSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQT 489
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
SF+ L+ + + D ++ + K + Y+ I S ++
Sbjct: 490 SFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
E+ N + ++ G+ S+A ++Y +KS G+V D +S ++ + KAG L
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSL 609
Query: 393 KDACDVFEDMPKQ-GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
++AC V E M +Q IV DV + M+ ++ L + + + E Y+
Sbjct: 610 EEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNC 669
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
E M + +P+ TF++L+ K+ F
Sbjct: 670 VINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL------ 723
Query: 512 LTPRHGAL 519
L RHG +
Sbjct: 724 LAKRHGVV 731
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
LY+ I L ++K F + E+++ K + + + +++ +G E A F M
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEM 148
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG--SFNILMNGWCRVRN 286
E + + N L+ A V ++ A E + + ++N ++ CR +
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
D + E+++++GF PD+ S+N+ +E + + F + D++ + M PN +Y
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
+ L + + + AL + + MK+ GI PD Y++LI L++ + +M ++G
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKE 436
+ D VTY +I C + A+ + +E
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 41/336 (12%)
Query: 209 LRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS--VEHAHGVLLEFKSL 266
+RRL +A K + K+F D+ + ++ L+ G S EHAH + E L
Sbjct: 94 IRRLREAKKFSTIDEVLQYQKKFD-DIKSEDF-VIRIMLLYGYSGMAEHAHKLFDEMPEL 151
Query: 267 -IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH-GFVPDVFSYNSFIESYCHDKDFRK 324
SFN L++ + + D+A K +++ E G PD+ +YN+ I++ C
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
+ + EE+ +NG P+ +++ ++ + + +++ MKS + P+ Y+S +
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
L + + DA ++ + M +GI DV TYN +I+ + E ++ EM+E+
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG--- 328
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
L+PD T+ +L+ L K G LD A
Sbjct: 329 --------------------------------LTPDTVTYCMLIPLLCKKGDLDRAVEVS 356
Query: 505 EELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEK 540
EE I L R K +V+ L + E + K
Sbjct: 357 EEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 4/249 (1%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAI 222
E + + +N ++ SK D + +E+ + G L T +++ L + G +D +
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 223 AAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILMNG 280
+ F +++ G + D + N L++ + + L++ K+L P N S+N + G
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSP-NIRSYNSRVRG 272
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
R + F A +++ MK G PDV +YN+ I +Y D + +V + EM E G P+
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VTY +++ L K G L +A+EV E+ H ++ Y ++ L AG++ +A + +
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Query: 401 DMPKQGIVR 409
+ Q R
Sbjct: 393 NGKLQSYFR 401
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 188 ELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKE-FGVDMDTAALNMLMDA 246
+L +EM + T+ + +L + K ++A+ F+ + E G+ D N ++ A
Sbjct: 143 KLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKA 202
Query: 247 LVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
L + S++ + E K+ + SFN L+ + R F + ++ + MK P+
Sbjct: 203 LCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPN 262
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
+ SYNS + +K F +++ M G P+ TY ++ A L + ++ Y
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYN 322
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
+MK G+ PDT Y LI +L K G L A +V E+ K ++ Y ++
Sbjct: 323 EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAG 382
Query: 426 REETALRLLK 435
+ + A +L+K
Sbjct: 383 KIDEATQLVK 392
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
Y+ + L +A + S EV + K + F ++ + G +G + A +F++MP
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
+ R V ++N ++S + + A++ KE+ E
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPE------------------------ 185
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
K ++PDL T++ ++ L + G +D S FEEL G P + L+
Sbjct: 186 ----------KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL 235
Query: 524 KDLEAKSMLKEKEHIEKLMT----PPSIR 548
++ + + E + I LM P+IR
Sbjct: 236 EEFYRRELFVEGDRIWDLMKSKNLSPNIR 264
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 151/350 (43%), Gaps = 3/350 (0%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ S N +I KSK DLVW + E Y T+ +++ L K G+ ++
Sbjct: 194 GFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEV 253
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMN 279
+ R+ L+ +++ +E + +L L K+++ +++ ++I++
Sbjct: 254 VDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMV-VDTIGYSIVVY 312
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
+ + ARKV ++M + GF + F Y F+ C D ++ +++L EM E+G P
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP 372
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
T+ ++ + G + LE E M + G++P ++ ++ + K + A ++
Sbjct: 373 YDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEIL 432
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
+G V D TY+ +I + + AL+L EME R P E +
Sbjct: 433 TKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTC 492
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ M K + P+ + L+ +K G +A + E+IS
Sbjct: 493 GKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/473 (19%), Positives = 179/473 (37%), Gaps = 30/473 (6%)
Query: 93 PTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVP--A 150
P N+ + ++ IS L+ + + L + +S+S ++ IL RF N A
Sbjct: 40 PNPNKQQQILIDYISKSLQSNDTWETLSTKF---SSIDLSDSLIETILLRFKNPETAKQA 96
Query: 151 FGFFTWAKTQTGYEHSPELYNLMIDILGKSK------------------NFDLVWELVEE 192
FF W+ H + Y L I IL K++ + DLV L++
Sbjct: 97 LSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLDT 156
Query: 193 MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKG-- 250
++ + +++ K E F+R+ + G + LN L+ K
Sbjct: 157 YEISSSTPLVFDL--LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKI 214
Query: 251 -NSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSY 309
+ V + ++ K + P N + I++ C+ + +++ + +P V
Sbjct: 215 DDLVWRIYECAID-KRIYP-NEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVN 272
Query: 310 NSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS 369
S + + + +L+ + + + Y+IV++A K G L A +V+++M
Sbjct: 273 TSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQ 332
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREET 429
G ++ Y+ + + + G +K+A + +M + G+ T+N +I EE
Sbjct: 333 RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392
Query: 430 ALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVH 489
L + M R P ++ PD T+S L+
Sbjct: 393 GLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIR 452
Query: 490 GLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKLM 542
G + +D A F E+ R ++P + L+ L ++ E K+M
Sbjct: 453 GFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIM 505
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 117/538 (21%), Positives = 201/538 (37%), Gaps = 117/538 (21%)
Query: 119 LVAQALDGHGFQ--VSNSSVQQILKRFN-NDWVPAFGFFTWAKTQTGYEHSPELYNLMID 175
L+ Q+L G GF+ +S S V +++ F N A GFF WA Q GY H Y+ +
Sbjct: 31 LIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFK 90
Query: 176 ILGKSKNFDLVWELVEEMAKH------------------------------EGYVTLYTM 205
L S+ F + L +++ + E + T +
Sbjct: 91 SLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEI 150
Query: 206 -----TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNM----------------LM 244
++L LT G ++ A F +M+ GV ++T + L+
Sbjct: 151 HPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLV 210
Query: 245 DALVKGN-SVEHAHGVLLEFKSLIPLNSG--------------------SFNILMNGWCR 283
D + K N ++ + LL SL + ++ ++ +
Sbjct: 211 DEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVV 270
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP----- 338
N + + V++ ++ G P Y +FI K + +V E + P
Sbjct: 271 TGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDI 330
Query: 339 -------------PNAVTYTIVMFALGKA------GQLSQAL----------EVYEKMKS 369
+AV + + M + GK +LS+ L + YE + S
Sbjct: 331 LDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSS 390
Query: 370 HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREET 429
G + YS +I L KAGR++++ ++M K+G+ DV YN +I C
Sbjct: 391 KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRP 450
Query: 430 ALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVH 489
A +L EM CK +L TY+ + M + + PD + L+
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE 510
Query: 490 GLRKSGKLDHACSFFEELISRG-LTPRHGALKQLVKDL-------EAKSMLKEKEHIE 539
GL K K++ A F + + R T L + V +L EA +L+E+EH+E
Sbjct: 511 GLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLE 568
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 10/188 (5%)
Query: 192 EMAKHEGYVT-LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKG 250
E+ +GY + L + + ++ L KAG+ ++ A + MK+ G+ D + N L++A K
Sbjct: 386 ELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKA 445
Query: 251 NSVEHAHGVLLE-FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSY 309
+ A + E F +N ++N+L+ +++ ++ + M E G PD Y
Sbjct: 446 EMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIY 505
Query: 310 NSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT------YTIVMFALGKAGQLSQALEV 363
S IE C + +V + E VT + + + + G +G+ SQ L
Sbjct: 506 MSLIEGLCKETKIEAAMEVFRKCMER--DHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Query: 364 YEKMKSHG 371
E ++ G
Sbjct: 564 REHLEHTG 571
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 142/362 (39%), Gaps = 38/362 (10%)
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNS 271
KAG+ DA F M + GV +DT N ++ + A +L +E K + P ++
Sbjct: 317 KAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISP-DT 375
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++NIL++ + + A + +++ G PD ++ + + C K +V+ V+ E
Sbjct: 376 KTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAE 435
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF------------- 378
M N + + ++M G + QA ++E+ + ++ T
Sbjct: 436 MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW 495
Query: 379 ----------------------YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
Y+ +I GKA + A +F+ M QG D TYN+
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 417 MISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND 476
+ + A R+L EM + CKP +TY E M K
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 477 LSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKE 536
+ P+ + L++G +SG ++ A +F + G+ H L L+K L+E
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 537 HI 538
+
Sbjct: 676 RV 677
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 116/261 (44%), Gaps = 1/261 (0%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
+N+++ + + + ++A + + MK G PD +YNS + + ++L EM
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
++GC P TY ++ + + G LS A+++YE M+ G+ P+ Y SLI ++G ++
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
+A F M + G+ + + ++I E A R+ +M++ PD+ +
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
+ + + D+ +F+ +++ + G LD A EE+ GL
Sbjct: 698 SLCADLGIVSEAESIF-NALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
Query: 514 PRHGALKQLVKDLEAKSMLKE 534
+ Q++ A L E
Sbjct: 757 SDCTSFNQVMACYAADGQLSE 777
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 174/450 (38%), Gaps = 60/450 (13%)
Query: 118 ELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDIL 177
E V +D + ++ SV I++ + N+ + + + Q S +ID+
Sbjct: 430 EAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVY 489
Query: 178 GKSKNF---DLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVD 234
+ + + V+ M+ V Y + +++ KA HE A++ F+ MK G
Sbjct: 490 AEKGLWVEAETVFYGKRNMSGQRNDVLEYNV--MIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 235 MDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG------SFNILMNGWCRVRNFD 288
D N L L + V+ A +L E L+SG ++ ++ + R+
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEM-----LDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A + E M++ G P+ Y S I + + Q M E+G N + T ++
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A K G L +A VY+KMK PD +S++ + G + +A +F + ++G
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC 722
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
DV+++ TM+ + A+ + +EM E
Sbjct: 723 -DVISFATMMYLYKGMGMLDEAIEVAEEMRE----------------------------- 752
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE-LISRGLTPRHGALKQLVKDL- 526
+ L D +F+ ++ G+L C F E L+ R L G K L L
Sbjct: 753 ------SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 527 ------EAKSMLKEKEHIEKLMTPPSIRFT 550
EA S L+ + K + P+I T
Sbjct: 807 KGGVPSEAVSQLQTAYNEAKPLATPAITAT 836
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 176 ILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVD 234
+L + ++ V + H+ YV + VLR L +AGK ++ + M GV
Sbjct: 118 LLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVL 177
Query: 235 MDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRV----RNFDQA 290
ML+D K V+ A LL K + + M RV FD+A
Sbjct: 178 PTNNTYGMLVDVYGKAGLVKEA---LLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRA 234
Query: 291 RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY----TI 346
+ F + +C K +D + ++ +NG + V ++
Sbjct: 235 -------------------DRFFKGWCAGKVDLDLDSI-DDFPKNGSAQSPVNLKQFLSM 274
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPD-TPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+F +G + ++L S P T +++LI + GKAGRL DA ++F +M K
Sbjct: 275 ELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKS 334
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
G+ D VT+NTMI T H A LLK+MEE+ PD +TY+
Sbjct: 335 GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 22/280 (7%)
Query: 170 YNLMIDILGKSKNFD--LVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR 227
Y +++D+ GK+ L+W ++ M + + TM V+R +G+ + A F+
Sbjct: 183 YGMLVDVYGKAGLVKEALLW--IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKG 240
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNF 287
VD+D ++ D K S + L +F S+ G+ N +
Sbjct: 241 WCAGKVDLDLDSI----DDFPKNGSAQSPVN-LKQFLSMELFKVGARNPIEKSLHFASGS 295
Query: 288 DQA-RKVMEDMKEHGFVPDVFS-YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
D + RK P + S +N+ I+ Y + EM ++G P + VT+
Sbjct: 296 DSSPRK-----------PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFN 344
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++ G G LS+A + +KM+ GI PDT Y+ L+ + AG ++ A + + + K
Sbjct: 345 TMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKV 404
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
G+ D VT+ ++ C ++ EM+ S + D
Sbjct: 405 GLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRID 444
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 123/293 (41%), Gaps = 3/293 (1%)
Query: 157 AKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAG 216
A +TG + + +Y +I+ +S + + M +H +T +++ +K G
Sbjct: 610 AMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNI 276
E+A + +MK+ D AA N ++ V A + + + SF
Sbjct: 670 CLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFAT 729
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM-SEN 335
+M + + D+A +V E+M+E G + D S+N + Y D + ++ EM E
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVER 789
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
+ T+ + L K G S+A+ + + TP ++ +F G A
Sbjct: 790 KLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLF--SAMGLYAYA 847
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
+ +++ I R+ YN +I T A + AL+ M+E+ +PD+ T
Sbjct: 848 LESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT 900
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 143/308 (46%), Gaps = 2/308 (0%)
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNI-LMNGWCRVRNFDQARKVM 294
+ A + + LV + + +L E K ++ F +++ + + F+ A+KV
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 132
Query: 295 EDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM-SENGCPPNAVTYTIVMFALGK 353
E+M V S+N+ + +Y K F V+++ E+ + P+ V+Y ++ AL +
Sbjct: 133 EEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCE 192
Query: 354 AGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVT 413
L +A+ + +++++ G+ PD +++L+ G+ + +++ M ++ + D+ T
Sbjct: 193 KDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRT 252
Query: 414 YNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF 473
YN + ++ + + L E++ KPD+ +++ + +
Sbjct: 253 YNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIV 312
Query: 474 KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLK 533
K+ PD TF+LL+ + K+G + A F+E S+ L+QLV +L S +
Sbjct: 313 KHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKRE 372
Query: 534 EKEHIEKL 541
E E I K+
Sbjct: 373 EAEEIVKI 380
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 119/271 (43%), Gaps = 4/271 (1%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+Y+ + L +K V E++EE K+ +++ KAG E+A F M
Sbjct: 76 VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEM 135
Query: 229 KEFGVDMDTAALNMLMDAL---VKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVR 285
+ N L+ A K + VE L S+ P + S+N L+ C
Sbjct: 136 PNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKP-DIVSYNTLIKALCEKD 194
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+ +A ++++++ G PD+ ++N+ + S F +++ +M E + TY
Sbjct: 195 SLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYN 254
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+ L + + + ++ ++K+ G+ PD ++++I G++ +A ++++ K
Sbjct: 255 ARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKH 314
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKE 436
G D T+ ++ C E+A+ L KE
Sbjct: 315 GYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 107/288 (37%), Gaps = 45/288 (15%)
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMED--MKEHGFVPDVFSYNSFIESYCHDKDF 322
SL + G+FN C +R F A V+ + P S S + + K
Sbjct: 3 SLSRVLRGTFNT-----CPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPK-- 55
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
R V++ + N Y + L A +L E+ E+ K + + F + +
Sbjct: 56 RIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARI 115
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVR--------------------------------- 409
I + GKAG ++A VFE+MP + R
Sbjct: 116 ISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS 175
Query: 410 ---DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
D+V+YNT+I C A+ LL E+E + KPD+ T++
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE 235
Query: 467 XXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
M + +++ D+ T++ + GL K + F EL + GL P
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKP 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 120/266 (45%), Gaps = 4/266 (1%)
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM-KEF 231
+I + GK+ F+ ++ EEM + ++ + +L + K + F + +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 232 GVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
+ D + N L+ AL + +S+ A +L +E K L P + +FN L+ F+
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKP-DIVTFNTLLLSSYLKGQFEL 233
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
++ M E D+ +YN+ + ++ +++ + E+ +G P+ ++ ++
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
G++ +A Y+++ HG PD ++ L+ + KAG + A ++F++ + +
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 410 DVVTYNTMISTACAHSREETALRLLK 435
T ++ S+ E A ++K
Sbjct: 354 GQTTLQQLVDELVKGSKREEAEEIVK 379
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 16/344 (4%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
E + +N MI + + L L EE++ VT M K K + E A
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIK---GYGKRIEIEKARE 165
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCR 283
F RM F + + A ++++ V +E A F+ + N+ ++++M+G+ R
Sbjct: 166 LFERMP-FELK-NVKAWSVMLGVYVNNRKMEDARKF---FEDIPEKNAFVWSLMMSGYFR 220
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
+ + +AR + + F D+ +N+ I Y + M G P+AVT
Sbjct: 221 IGDVHEARAIFYRV----FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVT 276
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
+ ++ A ++G+L EV+ + GI + ++LI + K G L++A VFE +
Sbjct: 277 VSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS 336
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXX 463
VR V N+MIS H + + AL + ME KPD T+
Sbjct: 337 ----VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLM 392
Query: 464 XXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
M D+ P++ F L+H L +SGKL A +E+
Sbjct: 393 EGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 9/286 (3%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVT-LYTMTKVLRRLTKAGKHEDAIAAFRRM 228
YN ++ IL S + E + GYV+ V+ K G+ A ++ M
Sbjct: 543 YNTLVQILA-SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNF 287
E+ ++ D +L++A +V+ A + K IP NS +N L+ + +V
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYL 661
Query: 288 DQA----RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
D+A RK+++ + + PDV++ N I Y RK + + + M + G N T
Sbjct: 662 DEAEAIYRKLLQSCNKTQY-PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFT 719
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
+ +++ K G+ +A ++ ++M+ I+ D Y+S++ + GR K+A + F++M
Sbjct: 720 FAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV 779
Query: 404 KQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
GI D T+ ++ + + A+R ++E+ ++ K LE +
Sbjct: 780 SSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELW 825
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 181/447 (40%), Gaps = 30/447 (6%)
Query: 112 EHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYN 171
E S E V AL ++SN ILK W A F W K++ YE + YN
Sbjct: 133 EALDSIEDVEDALSPWAERLSNKERTIILKE-QIHWERAVEIFEWFKSKGCYELNVIHYN 191
Query: 172 LMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEF 231
+M+ ILGK+ + V L +EM + T ++ +K G A+ +M +
Sbjct: 192 IMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI 251
Query: 232 GVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-------SLIPLNSGSFNILMNGWCRV 284
G+ D +++ K + A ++ S + L+S ++N +++ + +
Sbjct: 252 GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKS 311
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
+A + + M E G VP ++N+ I Y ++ +V +++ M + C P+ TY
Sbjct: 312 GQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTY 370
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK 404
I++ K + +A +++MK G+ PD Y +L++ +++A + +M
Sbjct: 371 NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDD 430
Query: 405 QGIVRDVVTYNTMISTACAHSREETALRLLKE------MEERSCKPDLETYHPXXXXXXX 458
+ D T + + E + K M +++ Y
Sbjct: 431 DNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGE------- 483
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGT---FSLLVHGLRKSGKLDHACSFFEELISRGLTPR 515
E +F + T +++++ S + AC FE ++S G+TP
Sbjct: 484 ----RGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPD 539
Query: 516 HGALKQLVKDLEAKSM-LKEKEHIEKL 541
LV+ L + M K + ++EK+
Sbjct: 540 KCTYNTLVQILASADMPHKGRCYLEKM 566
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/397 (18%), Positives = 152/397 (38%), Gaps = 41/397 (10%)
Query: 179 KSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA 238
K++ F W E A ++ YT ++ K+G+ ++A F+RM E G+ T
Sbjct: 275 KAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 239 ALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
N ++ + ++ K ++ ++NIL++ + + ++A ++MK
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMK 394
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT--------------- 343
+ G PD SY + + ++ + + ++ EM ++ + T
Sbjct: 395 DDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Query: 344 -------------------YTIVMFALGKAGQLSQALEVY---EKMKSHGIVPDTPFYSS 381
Y+ + A G+ G LS+A V+ +++ ++ Y+
Sbjct: 455 KSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIE----YNV 510
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
+I G + + AC++FE M G+ D TYNT++ + L++M E
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 442 CKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHAC 501
D Y + M + ++ PD+ + +L++ +G + A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 502 SFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
S+ E + G+ L+K L E E I
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+ R +E M+E G+V D Y + I S+ ++V +EM E P+ V Y +++
Sbjct: 558 KGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPK---Q 405
A G + QA+ E MK GI ++ Y+SLI + K G L +A ++ + + +
Sbjct: 618 NAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNK 677
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXX 465
DV T N MI+ S A + M++R + T+
Sbjct: 678 TQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEA 736
Query: 466 XXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
+ M + + D +++ ++ G+ A F+E++S G+ P K L
Sbjct: 737 TQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 142/350 (40%), Gaps = 24/350 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N MI I G + V L++ M H T T ++ TK E A A F+ MK
Sbjct: 336 FNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDT-RTYNILISLHTKNNDIERAGAYFKEMK 394
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-----------KSLIPLNSGSFNILM 278
+ G+ D + L+ A + VE A G++ E +S + +L
Sbjct: 395 DDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
W + F V +M G+ ++ +Y Y + + +V +E+++
Sbjct: 455 KSWSWFKRF----HVAGNMSSEGYSANIDAYGE--RGYLSEAE--RVFICCQEVNKR--- 503
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
+ Y +++ A G + +A E++E M S+G+ PD Y++L+ IL A
Sbjct: 504 -TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXX 458
E M + G V D + Y +IS+ + A + KEM E + +PD+ Y
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 459 XXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELI 508
E M + + + ++ L+ K G LD A + + +L+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 147/362 (40%), Gaps = 12/362 (3%)
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM----AKHEGY 199
++ W+ F W + Q Y +Y+ +I ++GK + L EM + +
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDAS 169
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM---DTAALNMLMDALVKGNSVEHA 256
V +T L KA E +MK G++ + N+L+ A + V+
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 257 HGVLLEFK-SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES 315
+ + + S + + +FN +M+ + + + V+ M+ + PD+ ++N I+S
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 316 YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
Y ++F K++Q + + + P T+ ++ GKA + +A V++KM +P
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPS 347
Query: 376 TPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLK 435
Y +I + G G + A ++FE++ + V T N M+ C + A +L
Sbjct: 348 FITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFH 407
Query: 436 EMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTF--SLLVHGLRK 493
PD TY + M K+ + P+ F +L V G R
Sbjct: 408 NASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGSRL 467
Query: 494 SG 495
G
Sbjct: 468 PG 469
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 8/227 (3%)
Query: 289 QARKVM---EDMKEHGFVPDVFSYNSFIESYCHDKD----FRKVDQVLEEMSE-NGCPPN 340
Q R M +MK G PD YN+ I ++ H +D KV L++M C PN
Sbjct: 148 QTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPN 207
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
VTY I++ A ++G++ Q +++ + + PD ++ ++ GK G +K+ V
Sbjct: 208 VVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLT 267
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
M D++T+N +I + E + K + KP L T++
Sbjct: 268 RMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKAR 327
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ M + P T+ ++ G + A FEE+
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 10/213 (4%)
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI----FILGKAGRLK 393
P N V Y+ ++ +GK GQ A+ ++ +MK+ G PD Y++LI KA L+
Sbjct: 131 PDNGV-YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 394 DACDVFEDMPKQGIVR---DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+ M +GI R +VVTYN ++ + + L K+++ PD+ T++
Sbjct: 190 KVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
M N+ PD+ TF++L+ K + + F+ L+
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 511 GLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
P ++ + M+ + E + K M
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 6/241 (2%)
Query: 206 TKVLRRLTKAGKHEDA---IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE 262
T +++ K G+ D + A RR + D ++ A V ++ A VL E
Sbjct: 418 TTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAE 477
Query: 263 FKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH-GFVPDVFSYNSFIESYCHDK 320
+ +P N ++N+L+ G+C+ D+A ++ +M E G PDV SYN I+
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP-DTPFY 379
D EM G P ++YT +M A +GQ A V+++M + V D +
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
+ L+ + G ++DA V M + G +V TY ++ + + AL L KE++E
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
Query: 440 R 440
R
Sbjct: 658 R 658
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
++ +++ + D+AR+V+ +M G + +YN ++ YC + + +L EM
Sbjct: 454 TYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM 513
Query: 333 SEN-GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
+E+ G P+ V+Y I++ + AL + +M++ GI P Y++L+ +G+
Sbjct: 514 TEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQ 573
Query: 392 LKDACDVFEDMPKQGIVR-DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
K A VF++M V+ D++ +N ++ C E A R++ M+E P++ TY
Sbjct: 574 PKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMK------SHGIVPDTPFYSSLIFILGKAGRL 392
P++ YT +M K G+++ + E M+ SH PD Y++++ AG +
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSH---PDEVTYTTVVSAFVNAGLM 468
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM-EERSCKPDLETYHP 451
A V +M + G+ + +TYN ++ C + + A LL+EM E+ +PD+ +Y+
Sbjct: 469 DRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
M ++P +++ L+ SG+ A F+E+++
Sbjct: 529 IIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGY---VTLYTMTKVLRRLTKAGKHEDAIAAFR 226
YN+++ K D +L+ EM + G V Y + ++ A+A F
Sbjct: 490 YNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI--IIDGCILIDDSAGALAFFN 547
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMNGWCRV 284
M+ G+ + LM A + A+ V E + + ++ ++N+L+ G+CR+
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSF 312
+ A++V+ MKE+GF P+V +Y S
Sbjct: 608 GLIEDAQRVVSRMKENGFYPNVATYGSL 635
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 136/306 (44%), Gaps = 7/306 (2%)
Query: 148 VPAFGFFTWAKTQTGYEHSPELYNLMIDILGK-SKNFDLVWELVEEMAKHEGYVTLYTMT 206
+ FF W Q Y H ++ M+ ++ K ++ + + ++E + +
Sbjct: 53 LKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFL 112
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL 266
+L + ++ AI + M FG +T A+NM+MD K N V +G L F+ +
Sbjct: 113 LLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVV---NGALEIFEGI 169
Query: 267 IPLNSGSFNILMNGWCRVR---NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
N SF+I ++ +C + + V++ M GF P+ + + C
Sbjct: 170 RFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVS 229
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ QV+ M +G + +++++ ++G+ +A++++ KM G P+ Y+SLI
Sbjct: 230 EAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLI 289
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
G + +A V + +G+ D+V N MI T R E A ++ +E+R
Sbjct: 290 KGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLV 349
Query: 444 PDLETY 449
PD T+
Sbjct: 350 PDQYTF 355
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 35/323 (10%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G+ + E + ++ + ++ +++V M V++ + ++ ++G+ + A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILMN 279
+ F +M + G + L+ V V+ A VL + +S L P + N++++
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAP-DIVLCNLMIH 325
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ------------ 327
+ R+ F++ARKV +++ VPD +++ S + S C F V +
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLV 385
Query: 328 --------------------VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
VL MS + TYT+ + AL + G A+++Y+ +
Sbjct: 386 TGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKII 445
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
D F+S++I L + G+ A +F+ + DVV+Y I R
Sbjct: 446 IKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRI 505
Query: 428 ETALRLLKEMEERSCKPDLETYH 450
E A L +M+E P+ TY
Sbjct: 506 EEAYSLCCDMKEGGIYPNRRTYR 528
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 171 NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKE 230
NL+ + K +++ M+ + + YT T L L + G AI ++ + +
Sbjct: 388 NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIK 447
Query: 231 FGVDMDTAALNMLMDALV---KGNSVEHAHGVLLEFKSLI----PLNSGSFNILMNGWCR 283
+D + ++D+L+ K N+ H FK I PL+ S+ + + G R
Sbjct: 448 EKKHLDAHFHSAIIDSLIELGKYNTAVHL------FKRCILEKYPLDVVSYTVAIKGLVR 501
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVT 343
+ ++A + DMKE G P+ +Y + I C +K+ KV ++L E + G + T
Sbjct: 502 AKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
Query: 344 YTIVMFALGK-AGQLSQALEVYEKMKS 369
V L + G S+ V+EK KS
Sbjct: 562 KFQVYSLLSRYRGDFSEFRSVFEKWKS 588
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 9/257 (3%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR-KVDQVLEEM 332
F +L+ + R +D+A +V M GFVP+ + N + D +F+ V E+
Sbjct: 111 FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMM-----DVNFKLNVVNGALEI 165
Query: 333 SENGCPPNAVTYTIVM---FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
E N ++ I + + G G L V ++M G P+ + ++ + +
Sbjct: 166 FEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRT 225
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
G + +A V M GI V ++ ++S + A+ L +M + C P+L TY
Sbjct: 226 GCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTY 285
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ L+PD+ +L++H + G+ + A F L
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEK 345
Query: 510 RGLTPRHGALKQLVKDL 526
R L P ++ L
Sbjct: 346 RKLVPDQYTFASILSSL 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 7/218 (3%)
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+++ +D+++E + +GC + +++ + +A+EVY M S G VP+T
Sbjct: 87 REYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAM 146
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL---LKE 436
+ ++ + K + A ++FE + R+ +++ +S C+ + + LK
Sbjct: 147 NMMMDVNFKLNVVNGALEIFEGIR----FRNFFSFDIALSHFCSRGGRGDLVGVKIVLKR 202
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
M P+ E + M + +S + +S+LV G +SG+
Sbjct: 203 MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGE 262
Query: 497 LDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE 534
A F ++I G +P L+K M+ E
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 3/255 (1%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
++ L+ + + F+ A + E M ++G S+N+ + + H K+F KV Q+ +E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 334 E--NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
+ N P+ ++Y I++ + +G +A+E+ +M+ G+ T +++++ L K G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHP 451
L+ A +++ +M K+G D YN I +A S E L++EM KPD +Y+
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVK-ELIEEMSSMGLKPDTISYNY 283
Query: 452 XXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
E + N+ +P+ TF L+ L S + + F++ +
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343
Query: 512 LTPRHGALKQLVKDL 526
P LK LV L
Sbjct: 344 KIPDFNTLKHLVVGL 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 119/255 (46%), Gaps = 13/255 (5%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTK--VLRRLTKAGK 217
Q G S +N +++ SKNFD V +L +E+ + + ++ +++ +G
Sbjct: 130 QYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGT 189
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNI 276
E AI R+M+ G+++ T A ++ +L K +E A + E K L++ ++N+
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
+ + + ++ ++++E+M G PD SYN + +YC + +V E + N
Sbjct: 250 RIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDAC 396
C PNA T+ ++F L + Q +++K +PD L+ L + + DA
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDA- 367
Query: 397 DVFEDMPKQGIVRDV 411
+G++R V
Sbjct: 368 --------KGLIRTV 374
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 3/243 (1%)
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ R F ++E K + + Y++ I SY F + E+M + G P +AV
Sbjct: 79 KCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAV 138
Query: 343 TYTIVMFALGKAGQLSQALEVYEKM--KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
++ ++ A + + ++++++ + + I+PD Y LI +G + A ++
Sbjct: 139 SFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMR 198
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXX 460
M +G+ + + T++S+ E A L EM ++ C+ D Y+
Sbjct: 199 QMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN-VRIMSAQKE 257
Query: 461 XXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALK 520
E M L PD +++ L+ + G LD A +E L P +
Sbjct: 258 SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFR 317
Query: 521 QLV 523
L+
Sbjct: 318 TLI 320
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 12/241 (4%)
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYT--IVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
HD D K ++ +S++ P + Y + + L K + S + E K+ + +
Sbjct: 44 HDPD--KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKE 101
Query: 376 TPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE-ETALRLL 434
PFYS+LI G+A A FE M + G R V++N +++ AC HS+ + +L
Sbjct: 102 EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLN-ACLHSKNFDKVPQLF 160
Query: 435 KEMEERSCK--PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLR 492
E+ +R K PD +Y M + F+ ++ L
Sbjct: 161 DEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLY 220
Query: 493 KSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHIEKL----MTPPSIR 548
K G+L+ A + + E++ +G + A + + +S + KE IE++ + P +I
Sbjct: 221 KKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTIS 280
Query: 549 F 549
+
Sbjct: 281 Y 281
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 14/277 (5%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKH-----EGYVTLYTMTKVLRRLTKAGKHEDAIA 223
+Y + L +K F+ V E++EE K+ EG+V +++ + G E+A
Sbjct: 73 VYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFV-----ARIINLYGRVGMFENAQK 127
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGW 281
F M E + N L++A V + G+ E K I + S+N L+ G
Sbjct: 128 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 187
Query: 282 CRVRNFDQARKVMEDMKEHGFVPDVFSYNSFI-ESYCHDKDFRKVDQVLEEMSENGCPPN 340
C +F +A ++++++ G PD ++N + ESY K F + +Q+ M E +
Sbjct: 188 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK-FEEGEQIWARMVEKNVKRD 246
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
+Y + L + + + +++K+K + + PD ++++I G+L +A ++
Sbjct: 247 IRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYK 306
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
++ K G +N+++ C E+A L KE+
Sbjct: 307 EIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 106/237 (44%), Gaps = 13/237 (5%)
Query: 285 RNFDQARKVMED------MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ F+ +++E+ M + GFV + I Y F +V +EM E C
Sbjct: 85 KKFEWVEEILEEQNKYPNMSKEGFVARI------INLYGRVGMFENAQKVFDEMPERNCK 138
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSH-GIVPDTPFYSSLIFILGKAGRLKDACD 397
A+++ ++ A + + +++++ I PD Y++LI L G +A
Sbjct: 139 RTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVA 198
Query: 398 VFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
+ +++ +G+ D +T+N ++ + + E ++ M E++ K D+ +Y+
Sbjct: 199 LIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLA 258
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
+ + N+L PD+ TF+ ++ G GKLD A ++++E+ G P
Sbjct: 259 MENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRP 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 44/214 (20%)
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
N Y + L A + E+ E+ + + F + +I + G+ G ++A VF
Sbjct: 70 NIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVF 129
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
++MP++ R +++N +++ AC +S+ K DL
Sbjct: 130 DEMPERNCKRTALSFNALLN-ACVNSK----------------KFDL------------- 159
Query: 460 XXXXXXXXXXEHMFKN-----DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
E +FK + PD+ +++ L+ GL G A + +E+ ++GL P
Sbjct: 160 ---------VEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKP 210
Query: 515 RHGALKQLVKDLEAKSMLKEKEHIEKLMTPPSIR 548
H L+ + K +E E I M +++
Sbjct: 211 DHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 133/314 (42%), Gaps = 10/314 (3%)
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEM----AKHEGY 199
++ W+ F W + Q Y +Y+ +I ++GK + L EM + +
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDAS 169
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM---DTAALNMLMDALVKGNSVEHA 256
V +T L KA E +MK G++ + N+L+ A + V+
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 257 HGVLLEFK-SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIES 315
+ + + S + + +FN +M+ + + + V+ M+ + PD+ ++N I+S
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 316 YCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
Y ++F K++Q + + + P T+ ++ GKA + +A V++KM +P
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPS 347
Query: 376 TPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLK 435
Y +I + G G + A ++FE++ + V T N M+ C + A +L
Sbjct: 348 FITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFH 407
Query: 436 EMEERSCKPDLETY 449
PD TY
Sbjct: 408 NASAFRVHPDASTY 421
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
Query: 293 VMEDMKEHGFVPDVFSYNSFIESYCHDKD----FRKVDQVLEEMSE-NGCPPNAVTYTIV 347
+ +MK G PD YN+ I ++ H +D KV L++M C PN VTY I+
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ A ++G++ Q +++ + + PD ++ ++ GK G +K+ V M
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
D++T+N +I + E + K + KP L T++
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
+ M + P T+ ++ G + A FEE+
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 98/257 (38%), Gaps = 42/257 (16%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN+++ +S D V L +++ +YT V+ K G ++ A RM+
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG----SFNILMNGWCRVR 285
D N+L+D+ K E FKSL+ +FN ++ + + R
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQT---FKSLMRSKEKPTLPTFNSMIINYGKAR 327
Query: 286 NFDQARKVMEDMKEHGFVPDVFSY-----------------------------------N 310
D+A V + M + ++P +Y N
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
Query: 311 SFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH 370
+ +E YC + + + D++ S P+A TY + A KA Q + +KM+
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKD 447
Query: 371 GIVPDTPFYSSLIFILG 387
GIVP+ F+ + + G
Sbjct: 448 GIVPNKRFFLEALEVFG 464
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 10/213 (4%)
Query: 338 PPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI----FILGKAGRLK 393
P N V Y+ ++ +GK GQ A+ ++ +MK+ G PD Y++LI KA L+
Sbjct: 131 PDNGV-YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 394 DACDVFEDMPKQGIVR---DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
+ M +GI R +VVTYN ++ + + L K+++ PD+ T++
Sbjct: 190 KVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 451 PXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR 510
M N+ PD+ TF++L+ K + + F+ L+
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 511 GLTPRHGALKQLVKDLEAKSMLKEKEHIEKLMT 543
P ++ + M+ + E + K M
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 139/343 (40%), Gaps = 40/343 (11%)
Query: 147 WVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMT 206
W+ A F + QT Y+ Y ++ +LGKS + +L +EM + T+ T
Sbjct: 104 WLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYT 163
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKEF-GVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-K 264
+L T++ +DA + +MK F D + L+ A V + + + E +
Sbjct: 164 ALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDE 223
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM--------------------------- 297
LI N+ + NI+++G+ RV FDQ KV+ DM
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 298 ---------KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+ G P+ ++N I SY + + K+ V+E M + P TY ++
Sbjct: 284 MMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNII 343
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A G +++M+S G+ DT + LI AG + K I
Sbjct: 344 EAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIP 403
Query: 409 RDVVTYNTMISTACAHSREETAL-RLLKEMEERSCKPDLETYH 450
+ YN +IS ACA + + + R+ M+ER C D T+
Sbjct: 404 ENTAFYNAVIS-ACAKADDLIEMERVYIRMKERQCVCDSRTFE 445
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ ++ + FDLV L +EM E +T T+T+ + L+ G+ + F +M+
Sbjct: 198 YSTLLKACVDASQFDLVDSLYKEM--DERLITPNTVTQNIV-LSGYGR----VGRFDQME 250
Query: 230 EFGVDM--------DTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNG 280
+ DM D +N+++ ++ +F++ I + +FNIL+
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+ + R +D+ VME M++ F +YN+ IE++ D + ++ ++M G +
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
T+ ++ AG + + + I +T FY+++I KA L + V+
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYI 430
Query: 401 DMPKQGIVRDVVTYNTMI 418
M ++ V D T+ M+
Sbjct: 431 RMKERQCVCDSRTFEIMV 448
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 6/212 (2%)
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P TY ++ LGK+GQ ++A +++++M G+ P Y++L+ ++ + DA +
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSI 181
Query: 399 FEDMPKQGIVR-DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXX 457
+ M + DV TY+T++ S+ + L KEM+ER P+ T +
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYG 241
Query: 458 XXXXXXXXXXXXEHMF-KNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRH 516
M PD+ T ++++ GK+D S++E+ + G+ P
Sbjct: 242 RVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPET 301
Query: 517 GALKQLVKDLEAKSMLKE----KEHIEKLMTP 544
L+ K M + E++ KL P
Sbjct: 302 RTFNILIGSYGKKRMYDKMSSVMEYMRKLEFP 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 171 NLMIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
N+++ G+ FD + +++ +M ++TM +L GK + + + + +
Sbjct: 234 NIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFR 293
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFD 288
FG++ +T N+L+ + K + V+ + L P + ++N ++ + V +
Sbjct: 294 NFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAK 353
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+ M+ G D ++ I Y + F KV ++ ++ P N Y V+
Sbjct: 354 NMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVI 413
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A KA L + VY +MK V D+ + ++ K G + D E ++ +
Sbjct: 414 SACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEG-MNDKIYYLEQERQKLMD 472
Query: 409 RDVVT 413
R V T
Sbjct: 473 RTVAT 477
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 162/410 (39%), Gaps = 31/410 (7%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWEL-VEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
+ G + + Y++MI K N D L V + ++ T ++ K G
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL------------------ 260
+ A+ RM + G+ D +L+ L K + +++A +L
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL 454
Query: 261 ----LEFKSLIP--------LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFS 308
++ +SL+ L + ++ C RN+ A +E M G P FS
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
YNS I+ + + ++ + E P+ TY IV+ L K A + + M+
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
G+ P YSS+I LGK GR+ +A + F M + GI D + Y MI+T + R +
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 429 TALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLV 488
A L++E+ + +P TY + M ++ LSP++ ++ L+
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 489 HGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
K G + + F + + H A L+ L K+K +
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQV 744
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 168/429 (39%), Gaps = 42/429 (9%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
GY +Y ++ K N + L M + + ++ K G +
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL--IPLNSGSFNILMN 279
F +M + GV + ++++ + K +V++A + + I N + L+
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY--CHDKDFRKVDQVLEEMSENGC 337
G+ + D+A ++ M ++G VPD +Y ++ CH+ + V +L+ + +NGC
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMV--ILQSILDNGC 444
Query: 338 PPN-----------------------------AVTYTIVMFALGKAGQLSQALEVYEKMK 368
N AV +V AL AL EKM
Sbjct: 445 GINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMV 504
Query: 369 SHGIVPDTPF-YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
+ G P PF Y+S+I L + ++D + + + V DV TY +++ C +
Sbjct: 505 NLGCTP-LPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
+ A ++ MEE +P + Y M ++ + PD + ++
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 488 VHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSML-KEKEHIEKL----M 542
++ ++G++D A EE++ L P L+ M+ K ++++K+ +
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 543 TPPSIRFTS 551
+P + +T+
Sbjct: 684 SPNVVLYTA 692
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 134/322 (41%), Gaps = 42/322 (13%)
Query: 155 TWAKT-QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLT 213
T+AK ++G + Y +MI+ ++ D ELVEE+ KH + +T T ++
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL-LEFKSLIPLNSG 272
K G E +M E G+ + L+ +K + + + L ++ I +
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHI 723
Query: 273 SFNILMNGWCRVRNFDQARKVM----------------------EDMKEHG--------- 301
++ L++G R + R+V+ + +G
Sbjct: 724 AYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVI 783
Query: 302 ------FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
+P+++ +N+ I YC + LE M + G PN VTYTI+M + +AG
Sbjct: 784 GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
+ A++++E PD YS+L+ L R DA + +M K GI + +Y
Sbjct: 844 DIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYE 900
Query: 416 TMISTACAHSREETALRLLKEM 437
++ C A++++K+M
Sbjct: 901 KLLQCLCYSRLTMEAVKVVKDM 922
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 150/343 (43%), Gaps = 5/343 (1%)
Query: 167 PELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFR 226
P YN +I L + + + LV + + + + T V+ L K + A A
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 227 RMKEFGVDMDTAALNMLMDALVK-GNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVR 285
M+E G+ A + ++ +L K G VE +S I + ++ I++N + R
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
D+A +++E++ +H P F+Y I + K Q L++M E+G PN V YT
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++ K G + ++ M + I D Y +L+ L +A K V + K+
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 406 GIVRDVVTYNTMISTACA---HSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
+++ ++ ++S + + + A+ ++ ++ ++S P+L ++
Sbjct: 752 KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRL 810
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
E M K + P+L T+++L+ ++G ++ A FE
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 141/380 (37%), Gaps = 57/380 (15%)
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNS 271
K G +A A F M+ G +D LM K N++ A + L + L+
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD---------- 321
FN L++G+ ++ D+ R + M + G +VF+Y+ I SYC + +
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN 367
Query: 322 --------------------------FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
K +L M +NG P+ +TY +++ L K
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCH 427
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFI-------LGKAGRLKDACDVFEDMPKQGIV 408
+L A+ + + + +G + P L I LG+ R KDA ++ G+
Sbjct: 428 ELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR-KDA-----NLAAVGLA 481
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
VVT + C+ AL +++M C P +Y+
Sbjct: 482 --VVT-----TALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASL 534
Query: 469 XEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEA 528
+ + D PD+ T+ ++V+ L K D A + + + GL P ++ L
Sbjct: 535 VNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGK 594
Query: 529 KSMLKEKEHIEKLMTPPSIR 548
+ + E E M I+
Sbjct: 595 QGRVVEAEETFAKMLESGIQ 614
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 35/251 (13%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVP-DVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
L G C + ++A +++ + +P V Y S +C + + + + M +
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
G + V YT +M K ++ A+ +Y +M D +++LI K G L
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXX 455
+F M K+G+ +V TY+ MI + C + ALRL
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF--------------------- 365
Query: 456 XXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR 515
+ D+S ++ ++ L+ G K G +D A ++ G+ P
Sbjct: 366 -------------VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPD 412
Query: 516 HGALKQLVKDL 526
H L+K L
Sbjct: 413 HITYFVLLKML 423
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 184/450 (40%), Gaps = 29/450 (6%)
Query: 67 DDDFVIPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKEHHSSPE-----LVA 121
+D + P L + A L + L FN+ + V ++L++ H + + V
Sbjct: 49 EDLHIAPKL---ISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVF 105
Query: 122 QALDGHGFQVSNSSVQQILKRFNND-WVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKS 180
+ G N + +LK + W+P + G + N +ID +
Sbjct: 106 SEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRC 165
Query: 181 KNFDL--VWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA 238
+ +L E+M++ + + +L L KAG+ DA F M + D
Sbjct: 166 GGLGVRDAMKLFEKMSERD----TVSWNSMLGGLVKAGELRDARRLFDEMPQ----RDLI 217
Query: 239 ALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMK 298
+ N ++D + + A + F+ + N+ S++ ++ G+ + + + AR + + M
Sbjct: 218 SWNTMLDGYARCREMSKAFEL---FEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMP 274
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
+V ++ I Y ++ D+++++M +G +A ++ A ++G LS
Sbjct: 275 LPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLS 332
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
+ ++ +K + + ++L+ + K G LK A DVF D+PK +D+V++NTM+
Sbjct: 333 LGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK----KDLVSWNTML 388
Query: 419 STACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFK-NDL 477
H + A+ L M +PD T+ M K DL
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
P + + LV L + G+L A + +
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE---HAH 257
+ T T ++ + G ++A +M G+ D AA+ ++ A + + H
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 258 GVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
+L +S + N+ N L++ + + N +A V D+ + D+ S+N+ +
Sbjct: 339 SILK--RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLG 392
Query: 318 HDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM-KSHGIVPDT 376
++ ++ M G P+ VT+ V+ + AG + + ++ + M K + +VP
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
Y L+ +LG+ GRLK+A V + MP + +VV + ++ H+ + A +L
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEP---NVVIWGALLGACRMHNEVDIAKEVLDN 509
Query: 437 M 437
+
Sbjct: 510 L 510
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 14/236 (5%)
Query: 171 NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKE 230
N ++D S+ D W ++ M + + T T ++ R + GKHE A++ M
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDNI----TYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 231 FGVDMDTAALNMLMDALVKGNSVE---HAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNF 287
G+ MD +L + A ++E H H KS + N L++ + + +
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLH--CYSVKSGFSGAASVLNSLVDMYSKCGSL 579
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ A+KV E++ PDV S+N + + EEM P++VT+ I+
Sbjct: 580 EDAKKVFEEIA----TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLIL 635
Query: 348 MFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
+ A LE ++ MK + I P Y L+ ILG+AGRL++A V E M
Sbjct: 636 LSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM 691
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 255 HAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE 314
H H +++F L L+ N L++ + + ARK+ ++M VF++ I
Sbjct: 44 HIHCPVIKFGLLENLDL--CNNLLSLYLKTDGIWNARKLFDEMSHR----TVFAWTVMIS 97
Query: 315 SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP 374
++ ++F + EEM +G PN T++ V+ + +S V+ + G
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG 157
Query: 375 DTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
++ SSL + K G+ K+AC++F + D +++ MIS+ + AL+
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNA----DTISWTMMISSLVGARKWREALQFY 213
Query: 435 KEMEERSCKPDLETY 449
EM + P+ T+
Sbjct: 214 SEMVKAGVPPNEFTF 228
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 270 NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVL 329
N + N L+NG+ + N +QA + M V D+ S+ + I+ Y +K +R+ V
Sbjct: 965 NEATSNCLINGYMGLGNLEQAESLFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 330 EEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
+M E G P+ VT + V+ A G L EV+ +G V D S+L+ + K
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
G L+ A VF ++PK +++ +N++I AH + AL++ +ME S KP+ T+
Sbjct: 1081 GSLERALLVFFNLPK----KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE---HAHG 258
+ + T +++ ++ ++ +AIA F +M E G+ D ++ ++ A +E H
Sbjct: 997 IISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM 1056
Query: 259 VLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
L+ ++ + GS L++ + + + ++A V ++ + ++F +NS IE
Sbjct: 1057 YTLQNGFVLDVYIGS--ALVDMYSKCGSLERALLVFFNLPK----KNLFCWNSIIEGLAA 1110
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM-KSHGIVPDTP 377
++ ++ +M PNAVT+ V A AG + + +Y M + IV +
Sbjct: 1111 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1170
Query: 378 FYSSLIFILGKAGRLKDACDVFEDM 402
Y ++ + KAG + +A ++ +M
Sbjct: 1171 HYGGMVHLFSKAGLIYEALELIGNM 1195
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 138/337 (40%), Gaps = 28/337 (8%)
Query: 183 FDLVWELVEEMA-KHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALN 241
D++W LV+ K + LY +++L A H + + +++F + A N
Sbjct: 717 MDILWSLVQIFQPKATNSLHLYRQSQILYMNAFANVHSLRVPS-HHLRDFSASLSLAPPN 775
Query: 242 MLMDALVKGNS----VEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
+ ++K S +E A ++ K+ + + N + + D A M M
Sbjct: 776 L--KKIIKQCSTPKLLESALAAMI--KTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQM 831
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
+E P+VF YN+ + + + ++ M + P++ TY+ ++ A A +
Sbjct: 832 QE----PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF 887
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
++L+ + + G ++LI GR+++A VF++MP+ RD + + TM
Sbjct: 888 GESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE----RDDIAWTTM 941
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
+S ++A L +M E++ E +F
Sbjct: 942 VSAYRRVLDMDSANSLANQMSEKN--------EATSNCLINGYMGLGNLEQAESLFNQMP 993
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
D+ +++ ++ G ++ + A + F +++ G+ P
Sbjct: 994 VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP 1030
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRN 286
M G++ D ++ + +L + V+ A ++ E + P ++ ++N L+ C+ ++
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 287 FDQARKVMEDMKEHGFV-PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+ +++M++ V PD+ S+ I++ C+ K+ R+ ++ ++ G P+ Y
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
+M + S+A+ VY+KMK G+ PD Y++LIF L KAGR+++A + M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 406 GIVRDVVTYNTMISTAC 422
G D TY ++++ C
Sbjct: 330 GYEPDTATYTSLMNGMC 346
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Query: 251 NSVEHAHGVL-LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSY 309
+S+ + H VL L + + + + +I + C D+A+ +M+++ E PD ++Y
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTY 197
Query: 310 NSFIESYCHDKDFRKVDQVLEEMSEN-GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
N ++ C KD V + ++EM ++ P+ V++TI++ + + L +A+ + K+
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
+ G PD Y++++ + +A V++ M ++G+ D +TYNT+I R E
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 429 TALRLLKEMEERSCKPDLETY 449
A LK M + +PD TY
Sbjct: 318 EARMYLKTMVDAGYEPDTATY 338
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 3/226 (1%)
Query: 273 SFNILMNGWCRV--RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
+F IL++ CR + +V+ M +G PD + + + S C + +++
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSH-GIVPDTPFYSSLIFILGKA 389
E++E PP+ TY ++ L K L E ++M+ + PD ++ LI + +
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
L++A + + G D YNT++ C S+ A+ + K+M+E +PD TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSG 495
+ + M PD T++ L++G+ + G
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
G E ++ + L ++ D +L++E+ + YT +L+ L K
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 220 DAIAAFRRMKE-FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG------ 272
M++ F V D + +L+D + ++ A ++ + N+G
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG-----NAGFKPDCF 266
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
+N +M G+C + +A V + MKE G PD +YN+ I + L+ M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 333 SENGCPPNAVTYTIVMFALGKAG 355
+ G P+ TYT +M + + G
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKG 349
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 19/305 (6%)
Query: 132 SNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVE 191
S + VQ+++ +D + A F +A Q + HS + ++I LG+ + F+L+ ++
Sbjct: 50 SPTRVQKLIAS-QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDV-- 106
Query: 192 EMAKHE--GY-VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
+AKH GY +T T +++ +A E ++ F +M EF LN ++D LV
Sbjct: 107 -LAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 249 KGNSVEHAHGVLLEFKS-----LIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFV 303
+ FKS ++P N+ S+N+LM +C + A ++ M E V
Sbjct: 166 SHRG--YLQKAFELFKSSRLHGVMP-NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV 222
Query: 304 PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV 363
PDV SY I+ +C ++L++M G P+ ++ L G + +
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKY 278
Query: 364 YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
E+M S G P + L+ G++++ACDV E + K G T+ +I C
Sbjct: 279 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 338
Query: 424 HSREE 428
E
Sbjct: 339 EDESE 343
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 5/204 (2%)
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSS 381
F +D VL + +G P +T ++ +A + L + KM P +
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 382 LIFIL-GKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
++ +L G L+ A ++F+ G++ + +YN ++ C + A +L +M ER
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
PD+++Y + M PD L+ GL G D
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEG 275
Query: 501 CSFFEELISRGLTPRHGALKQLVK 524
+ EE+IS+G +P LVK
Sbjct: 276 KKYLEEMISKGFSPHFSVSNCLVK 299
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 9/241 (3%)
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGF--VPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
IL+ R R F+ V+ + G+ ++F+Y I+ Y K KV +M
Sbjct: 89 ILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKML 146
Query: 334 E-NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
E N P I+ + G L +A E+++ + HG++P+T Y+ L+ L
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPX 452
A +F M ++ +V DV +Y +I C + A+ LL +M + PD
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTL 262
Query: 453 XXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
E M SP + LV G GK++ AC E ++ G
Sbjct: 263 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 322
Query: 513 T 513
T
Sbjct: 323 T 323
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 238 AALNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVME 295
+ + ++DA V+ +E A+G+ +E K P + + +IL+N +A +
Sbjct: 705 SVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDP-GAVTISILVNALTNRGKHREAEHISR 763
Query: 296 DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
E D YN+ I++ + ++ E M +G P + TY ++ G+
Sbjct: 764 TCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGL 823
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
QL +A+E++ + G+ D Y+++I GK G++ +A +F +M K+GI +YN
Sbjct: 824 QLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN 883
Query: 416 TMISTACAHSREETAL-RLLKEMEERSCKPDLETY 449
M+ CA SR + LL+ ME DL TY
Sbjct: 884 MMVKI-CATSRLHHEVDELLQAMERNGRCTDLSTY 917
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 173/422 (40%), Gaps = 35/422 (8%)
Query: 44 PESPELPAWVKFSDNPTPPNADSDDDFVIPSLAHWVDAHILDAKPKLVTPTF-------- 95
PE P+ P + + P P +D D +I A ++ + + +TP +
Sbjct: 51 PEKPK-PRY----ERPKHPLSDDDARRIIKKKAQYLSTLRRNQGSQAMTPKWIKRTPEQM 105
Query: 96 ------NENKHDY----VEAISTL--LKEHHSSPELVAQALDGHGFQVSNSSVQQILKRF 143
+ N Y V AI T+ L + + + + ++S + +LK
Sbjct: 106 VQYLEDDRNGQMYGKHVVAAIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFRDMCVVLKE- 164
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
W FF+W K Q Y S +Y +++ + G+ + E EM +
Sbjct: 165 QRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAV 224
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
+L + G+H + ++ ++E + + T+ N ++ +L K + HG +++
Sbjct: 225 ACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQK----KSFHGKVIDL 280
Query: 264 -----KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
+ +P N ++ ++++ + + ++A K +MK GFVP+ +Y+S I
Sbjct: 281 WLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVK 340
Query: 319 DKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPF 378
D+ K + E+M G P+ T ++ K +AL ++ M+ + I D
Sbjct: 341 AGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVI 400
Query: 379 YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEME 438
+I I GK G DA +FE+ + ++ D TY M AL +++ M+
Sbjct: 401 RGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMK 460
Query: 439 ER 440
R
Sbjct: 461 TR 462
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 118/305 (38%), Gaps = 34/305 (11%)
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T++ ++ LT GKH +A R E +++DT N L+ A+++ ++
Sbjct: 741 TISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQ--------- 791
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
C A ++ E M G + +YN+ I Y
Sbjct: 792 ------------------C-------ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLD 826
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
K ++ +G + YT ++ GK G++S+AL ++ +M+ GI P TP Y+ ++
Sbjct: 827 KAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
I + + ++ + M + G D+ TY T+I S+ A + + ++E+
Sbjct: 887 KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
+ M + +SPD ++ G G + F
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILF 1006
Query: 504 FEELI 508
+E++I
Sbjct: 1007 YEKMI 1011
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 124/295 (42%), Gaps = 37/295 (12%)
Query: 231 FGVDMDTAALNMLMDALVKGNSVEHAHGVL-LEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
F D+ ++A+N ++ + V+ V A + + + + + + L+ + R +
Sbjct: 629 FKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKE 688
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A+++ E P S I++Y + E +E GC P AVT +I++
Sbjct: 689 AKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVN 747
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
AL G+ +A + I DT Y++LI + +AG+L+ A +++E M G+
Sbjct: 748 ALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPC 807
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
+ TYNTMIS + R L+L K +E S
Sbjct: 808 SIQTYNTMISV---YGR---GLQLDKAIEIFS---------------------------- 833
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVK 524
+ ++ L D ++ ++ K GK+ A S F E+ +G+ P + +VK
Sbjct: 834 -NARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 16/271 (5%)
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
GW +VR+F K+ + + P V Y + Y + ++ EM E GC P
Sbjct: 167 GWRQVRDFFSWMKL-----QLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEP 221
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
+AV ++ + G+ S L Y+ ++ I+ T Y+ ++ L K D++
Sbjct: 222 DAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLW 281
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
+M ++G+ + TY ++S+ +E AL+ EM+ P+ TY
Sbjct: 282 LEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKA 341
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL---------ISR 510
E M + P T + ++ K+ A S F ++ + R
Sbjct: 342 GDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIR 401
Query: 511 GLTPRHGALKQLVKDLEAKSMLKEKEHIEKL 541
GL R L D A+SM +E E + L
Sbjct: 402 GLIIRIYGKLGLFHD--AQSMFEETERLNLL 430
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 123/327 (37%), Gaps = 59/327 (18%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHSSPE------LVAQALDGHGFQVSNSSVQQILKRF 143
LV N KH E IS E + + L+ L+ Q ++ +I +R
Sbjct: 745 LVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCAS----EIYERM 800
Query: 144 NNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
+ VP S + YN MI + G+ D E+ + Y+
Sbjct: 801 HTSGVPC---------------SIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEK 845
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF 263
T ++ K GK +A++ F M++ G+ T + NM +VK + H
Sbjct: 846 IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM----MVKICATSRLH------ 895
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
+ ++++ M+ +G D+ +Y + I+ Y F
Sbjct: 896 ------------------------HEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFA 931
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
+ ++ + + E G P + ++ ++ AL KAG + +A Y KM GI PD+ +++
Sbjct: 932 EAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTIL 991
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRD 410
G + +E M + + D
Sbjct: 992 KGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 14/291 (4%)
Query: 166 SPELYNLMIDILGK----SKNFDLVWELVEE-MAKHEGYVTLYTMTKVLRRLTKAGKHED 220
S +YN M+ L K K DL E+VEE + +E +T T V+ K G E+
Sbjct: 257 STSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNE-----FTYTLVVSSYAKQGFKEE 311
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS--LIPLNSGSFNILM 278
A+ AF MK G + + ++ VK E A G+ + +S ++P N +L
Sbjct: 312 ALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML- 370
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ + + N+ +A + DM+ + D I Y F + EE
Sbjct: 371 SLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLL 430
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
+ TY + +G + +AL+V E MK+ I Y ++ K + A +
Sbjct: 431 ADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEA 490
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
F + K G+ D + N M++ + E A +K++ D+E Y
Sbjct: 491 FRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELY 540
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 146/368 (39%), Gaps = 38/368 (10%)
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHED 220
TG++ P L + L + + E+ + ++ T VL KA K +
Sbjct: 139 TGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDR 198
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSLIPLNSGSFNILMN 279
+ M E + D+ + L+ AL G V + +L + K + + L++
Sbjct: 199 FWELHKEMVE--SEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLIS 256
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G+C + N+ +V+ M P ++ Y I+ C +K + + + + + G P
Sbjct: 257 GFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
+ V YT ++ + G L A +++ +M G+ P+ Y+ +I K G + +
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
+M + G +++ NTMI C+H + + A + K M E P+ TY+
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNA-------- 428
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGAL 519
L+ G K K++ ++EL + GL P A
Sbjct: 429 ---------------------------LIKGFCKENKVEKGLKLYKELKALGLKPSGMAY 461
Query: 520 KQLVKDLE 527
LV++L+
Sbjct: 462 AALVRNLK 469
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/451 (18%), Positives = 168/451 (37%), Gaps = 47/451 (10%)
Query: 101 DYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQ 160
+ + +ST+++E + + D F ++ L + N+ + + FF W +
Sbjct: 49 EMAKTVSTIMRERQRWQQTLVS--DFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSN 106
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMA-KHEGYVTLYTMTKVLRRLTKAGKHE 219
Y P N++ L K ++ K E + + + ++ L++ G E
Sbjct: 107 YDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTL----LEQYVKCLSEEGLVE 162
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMN 279
+AI + +K+ G+ +SV + VLL
Sbjct: 163 EAIEVYNVLKDMGIS----------------SSVVTCNSVLL------------------ 188
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G + R D+ ++ ++M E F D I + C D + ++L++ + G P
Sbjct: 189 GCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDP 246
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
Y ++ + G + EV M + P Y +I L + +A +F
Sbjct: 247 GQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF 306
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXX 459
+++ +G D V Y TMI C +A +L EM ++ +P+ Y+
Sbjct: 307 KNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKR 366
Query: 460 XXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPR---- 515
M +N + + + ++ G GK D A F+ + G+TP
Sbjct: 367 GEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITY 426
Query: 516 HGALKQLVKDLEAKSMLKEKEHIEKLMTPPS 546
+ +K K+ + + LK + ++ L PS
Sbjct: 427 NALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/274 (17%), Positives = 104/274 (37%), Gaps = 34/274 (12%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G + +Y +I + N+ + E++ M + ++Y K+++ L K
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMN 279
+A F+ +K+ G D + ++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVV----------------------------------YTTMIR 326
Query: 280 GWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPP 339
G+C ARK+ +M + G P+ F+YN I + + V+ EM NG
Sbjct: 327 GFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGG 386
Query: 340 NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVF 399
++ ++ G+ +A E+++ M G+ P+ Y++LI K +++ ++
Sbjct: 387 TMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLY 446
Query: 400 EDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
+++ G+ + Y ++ T+L L
Sbjct: 447 KELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 172/426 (40%), Gaps = 47/426 (11%)
Query: 53 VKFSDNPTPPNADSDDDFVIPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKE 112
+ FS P ++ + DF++ W + +L+ F+ + +
Sbjct: 42 IPFSTFTKPSSSIAPGDFLVREWKDWFKHRDVKQSHQLIDRIFDILRAPSNDGDDRAFYL 101
Query: 113 HHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNL 172
H S+ L +++ V +L D + FF WA Q G+ H+ ++
Sbjct: 102 HLSNLRL----------RLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHA 151
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYV-TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEF 231
+ IL +K L+ + ++ E +L ++ AG+ + A+ F M+
Sbjct: 152 IFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFR 211
Query: 232 GVDMDTAALNMLMDAL-----------------VKGNSVEHAHGVLLE------------ 262
G+D+D+ ++L++AL V+G H +L++
Sbjct: 212 GLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAE 271
Query: 263 --FKSLI---PLNSGS-FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY 316
++L+ P GS IL++ C R F +A K+++++K G V +YN +I +
Sbjct: 272 DYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRAL 331
Query: 317 CHDKDFRKVDQVLEEMSE-NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPD 375
L+++S GC Y ++F L K L ++ +M G+ P+
Sbjct: 332 IKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPN 391
Query: 376 TPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLK 435
++ + KAG + +A +++ + G ++YN +I T CA+ E A +LK
Sbjct: 392 KKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLK 451
Query: 436 EMEERS 441
+R
Sbjct: 452 GAIDRG 457
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 33/310 (10%)
Query: 157 AKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAG 216
++++ G+ + YN +I L +++ + +++++ ++ T + + L G
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
Query: 217 K----HEDAIAAFRR----MKEFGVDMDTAALNM--LMDALVKGNSVEHAHGVLLEFKSL 266
K E IAA R + G + +A ++ + DAL+ N + + GV FK
Sbjct: 477 KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMI-NELFNKSGVDTSFKMF 535
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH----DKDF 322
L GS LM G D A K++ M+E G+ P Y + I+ C +K+F
Sbjct: 536 TSLIYGSIT-LMRG-------DIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNF 587
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
L + + Y + + G AG+ A VY+ M GI TP +S
Sbjct: 588 F---TTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGI---TPTVASN 641
Query: 383 IFILG---KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE 439
I +L K ++ DA F D+ +QG + + Y MI C ++ + A+ L+EM+
Sbjct: 642 ILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKG 700
Query: 440 RSCKPDLETY 449
+P +E Y
Sbjct: 701 EGLQPSIECY 710
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 148/357 (41%), Gaps = 3/357 (0%)
Query: 147 WVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMT 206
W A F + Q Y+ + +Y +I +LGK K + EL +EM V T
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 207 KVLRRLTKAGKHEDAIAAFRRMKE-FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
++ +++G+ + A RMK D ++L+ + ++ + + +L + +
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 266 L-IPLNSGSFNILMNGWCRVRNFDQARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFR 323
I N+ ++N L++ + + + F + + M E PD ++ NS + ++ +
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI 383
++ E+ +G PN T+ I++ + GK+G + V E M+ + Y+ +I
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
G+AG LK +F M + I VT +++ S+ + +L+ +E +
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429
Query: 444 PDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
DL ++ E M K PD T+ +V R SG H
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHV 486
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 7/211 (3%)
Query: 233 VDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL------IPLNSGSFNILMNGWCRVRN 286
V M A N +++AL + + A + K + +N G+FN+++NG+C
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
F++A +V M + PD S+N+ + C ++ + +++ EM E P+ TY +
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
+M K G++ + Y+ M + P+ Y+ L L KAG+L DA F DM
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSK 484
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEM 437
+ D Y ++ R + L+++ EM
Sbjct: 485 LKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 142/337 (42%), Gaps = 11/337 (3%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
T++T+ VL + K+ + + + G+ + N++ A + E A
Sbjct: 129 TIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHY 188
Query: 261 LEFKSLIPLNS--GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCH 318
F PLN +F IL+ G N ++A ++ EDM GFV D Y+ +
Sbjct: 189 KLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVK 248
Query: 319 DKDFRKVDQVLEEMSE--NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM--KSHGIVP 374
+ D V ++ +E+ E G + V Y +M +A+E YE+ ++ +
Sbjct: 249 NSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRM 308
Query: 375 DTPFYSSLIFILGKAGRLKDACDVF-----EDMPKQGIVRDVVTYNTMISTACAHSREET 429
Y+ ++ L + G+ +A +F E P + + ++ T+N M++ CA + E
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 430 ALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVH 489
A+ + ++M + C PD +++ M + ++ PD T+ LL+
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 490 GLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDL 526
K GK+D ++++ ++ L P +L L
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQL 465
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 128/319 (40%), Gaps = 82/319 (25%)
Query: 238 AALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVME 295
A +L+ LV +++E A + + K + ++ ++ LM G + + D K+ +
Sbjct: 202 ATFRILVKGLVSNDNLEKAMEIKEDMAVKGFV-VDPVVYSYLMMGCVKNSDADGVLKLYQ 260
Query: 296 DMKEH--GFVPDVFSYNSFIESY-----------CHDK---DFRKV-------DQVLEEM 332
++KE GFV D Y ++ Y C+++ + KV + VLE +
Sbjct: 261 ELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEAL 320
Query: 333 SENG----------------CPP-----NAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
SENG PP N T+ +++ G+ +A+EV+ +M
Sbjct: 321 SENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFK 380
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
PDT +++N +++ C + A
Sbjct: 381 CSPDT-----------------------------------LSFNNLMNQLCDNELLAEAE 405
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
+L EMEE++ KPD TY + M +++L P+L ++ L L
Sbjct: 406 KLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQL 465
Query: 492 RKSGKLDHACSFFEELISR 510
K+GKLD A SFF+ ++S+
Sbjct: 466 IKAGKLDDAKSFFDMMVSK 484
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%)
Query: 153 FFTWAKTQTGYEHSPELY-NLMIDILGKSKNFDL--VWELVEEMAKHE--GYVTLYTMTK 207
F WA + L +L++ I ++ D +W+LV+E+ + E G + L + +
Sbjct: 177 FLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNE 236
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE-FKSL 266
++ K GK + A F + +EFG + + ++AL K + ++ A V + KS
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVME--DMKEHGFVPDVFS---------------- 308
+ ++ +C+ ++A V E KE P +
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 309 ------------------YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFA 350
++ I S C ++ + +L +M G P + +V+ A
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 351 LGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD 410
K G L +A EV + M+S G+ PD Y+ +I K G + +A ++ + K+
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLS 476
Query: 411 VVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
VTY+ +I C + AL+LL EM+ +P+ + Y+
Sbjct: 477 PVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYN 516
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 49/311 (15%)
Query: 145 NDWVPAFG--------FFTWAKTQT-GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAK 195
N+ + FG F ++KT+ G+ + + Y L ++ L K D + E+M K
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 196 HEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK--------EFGVDMDTA--------- 238
M ++ K GK E+A + + K F + TA
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 239 -ALNMLMD------------------ALVKGNSVEHAHGVLLEFKSLIPL-NSGSFNILM 278
A ML D +L + +V+ A +LL+ S P + FN+++
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
+ + + D+A++V++ M+ G PDV++Y I Y + ++L E +
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI--FILGKAGRLKDAC 396
+ VTY ++ K + +AL++ +M G+ P+ Y+ LI F L KA + A
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL-KALDWEKAE 533
Query: 397 DVFEDMPKQGI 407
+FE+M ++G+
Sbjct: 534 VLFEEMKQKGL 544
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 81/216 (37%), Gaps = 9/216 (4%)
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
V + E G PNA TY + + AL K + A V EKM G++ + ++I
Sbjct: 253 VFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFC 312
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS-----REETALRLLKEMEERSC 442
K G+ ++A V+E + T+I+ C + +E L E R
Sbjct: 313 KEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGI 372
Query: 443 KPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACS 502
KP + H M +P F+L+VH K+G LD A
Sbjct: 373 KPFSDVIHSLCRMRNVKDAKALLL----DMISKGPAPGNAVFNLVVHACSKTGDLDEAKE 428
Query: 503 FFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
+ + SRGL P ++ M+ E + I
Sbjct: 429 VLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 1/239 (0%)
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
LN N L+ + ++ A V +E GF P+ +Y +E+ C V
Sbjct: 229 LNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSV 288
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
E+M ++G ++ K G+ +A VYE K+ F ++LI L K
Sbjct: 289 CEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCK 348
Query: 389 A-GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
G + A ++ D+ + R + ++ +I + C + A LL +M + P
Sbjct: 349 NDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 408
Query: 448 TYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEE 506
++ + M L PD+ T+++++ G K G +D A E
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 149/356 (41%), Gaps = 58/356 (16%)
Query: 138 QILKRFNNDW-VPAFGFFTWAKTQTG---YEHSPE----LYNLMIDILGKSKNFDLVWEL 189
QI +R +DW V G++ W + ++ PE + +MI K K+ + +
Sbjct: 161 QISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKY 220
Query: 190 VEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGV---------------- 233
+ M + ++ + +L + G EDA+ F M GV
Sbjct: 221 FDRMPEK----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 234 --------------DMDTAALNM-----LMDALVKGNSVEHAHGVLLEFKSLIPLNSGSF 274
D LN L+D K ++ A + E + N ++
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT--QRNLVTW 334
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
N +++G+ R+ + AR++ + M + +V S+NS I Y H+ + E+M +
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 335 NG-CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
G P+ VT V+ A G L + + ++ + I + Y SLIF+ + G L
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
+A VF++M + RDVV+YNT+ + A+ L LL +M++ +PD TY
Sbjct: 451 EAKRVFDEMKE----RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 264 KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFR 323
K+ I LN + L+ + R N +A++V ++MKE DV SYN+ ++ + D
Sbjct: 426 KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGV 481
Query: 324 KVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS 369
+ +L +M + G P+ VTYT V+ A +AG L + +++ +++
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G S ELY+++I +++ + +L +E + KV+ + G E
Sbjct: 278 GIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETT 337
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL-LEFKSLIPLNSGSFNILMNG 280
+ M++ + + L +++ K A V K ++ I +N
Sbjct: 338 LEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINA 397
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
+CR+ +++A + ++M + GF V +Y++ ++ Y + +++ +M + GC PN
Sbjct: 398 YCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPN 457
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
Y ++ G+A L +A +++++MK ++PD Y+S+I ++ L+ ++++
Sbjct: 458 IWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQ 517
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
+ D M+ SR + +RLL++M+ + D Y
Sbjct: 518 EFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLY 566
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 167 PELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFR 226
PE+ ++ + + N + E+V M K E VT + ++ +K +A+ +
Sbjct: 318 PEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYE 377
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVR 285
+ + + ++A + A + E K +++ +M+ + + R
Sbjct: 378 WAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTR 437
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
A ++M MK+ G P+++ YNS I+ + D R+ +++ +EM P+ V+YT
Sbjct: 438 RLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYT 497
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++ A ++ +L + +E+Y++ + + D ++ + K R+ + + +DM +
Sbjct: 498 SMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVE 557
Query: 406 GIVRDVVTYNTMIST 420
G D Y++ ++
Sbjct: 558 GTRLDARLYSSALNA 572
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/462 (19%), Positives = 176/462 (38%), Gaps = 73/462 (15%)
Query: 90 LVTPTFNENKHDYVEAISTLLKEHHSSPE------LVAQALDGHGFQVSN---------- 133
L++ + D + ++ L+EH + P+ L+ + F++++
Sbjct: 110 LISYLVSSKSWDLLVSVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDK 169
Query: 134 ----SSVQQILKRFN--NDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVW 187
S+ +K FN + F K G E SP Y +++ K V
Sbjct: 170 SLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVV 229
Query: 188 ELVEE--------MAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAA 239
EL +E +AK G ++YT+ V L K+G+ +A+ MK+ G+ +
Sbjct: 230 ELFQEFKSQRLSFLAKESG--SIYTI--VCSSLAKSGRAFEALEVLEEMKDKGIPESSEL 285
Query: 240 LNMLMDALVKGNSVEHAHGVLLEF--KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDM 297
+ML+ A + V + E K L+ +++ + R N + +V+ M
Sbjct: 286 YSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM-YVREGNMETTLEVVAAM 344
Query: 298 KEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQL 357
++ + + + + F + +V E + C VTY I + A +
Sbjct: 345 RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCR---- 400
Query: 358 SQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTM 417
LE Y K + +F++M K+G + VV Y+ +
Sbjct: 401 ---LEKYNKAEM----------------------------LFDEMVKKGFDKCVVAYSNI 429
Query: 418 ISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL 477
+ R A+RL+ +M++R CKP++ Y+ + M + +
Sbjct: 430 MDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKV 489
Query: 478 SPDLGTFSLLVHGLRKSGKLDHACSFFEEL-ISRGLTPRHGA 518
PD +++ ++ +S +L+ ++E ++RG R A
Sbjct: 490 LPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMA 531
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 187 WELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDA 246
W + EE G VT RL K K E F M + G D A + +MD
Sbjct: 378 WAMKEEC--EAGQVTYAIAINAYCRLEKYNKAE---MLFDEMVKKGFDKCVVAYSNIMDM 432
Query: 247 LVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPD 305
K + A ++ + K N +N L++ R + +A K+ ++MK +PD
Sbjct: 433 YGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPD 492
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
SY S I +Y K+ + ++ +E N + I++ K ++ + + + +
Sbjct: 493 KVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQ 552
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAG 390
MK G D YSS + L AG
Sbjct: 553 DMKVEGTRLDARLYSSALNALRDAG 577
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 153/389 (39%), Gaps = 3/389 (0%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
+ + K +T + ++D + + F+ ++E+ E M+ E + ++ L
Sbjct: 258 LWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSL 317
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG 272
+ ++ A MK G+ + N ++ L K A+ +L E S
Sbjct: 318 CRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSE 377
Query: 273 -SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++ +LM C+ + +AR V+E M YN ++ C + ++ VL
Sbjct: 378 YTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVS 437
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV-PDTPFYSSLIFILGKAG 390
M + C P+ T V+ L K G++ A++V + M + PD ++++ L G
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG 497
Query: 391 RLKDACDVFED-MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
R ++A DV MP+ I VV YN +I + + A+ + ++E+ S D TY
Sbjct: 498 RAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ + D ++ + GL +SG L AC F +L
Sbjct: 558 AIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Query: 510 RGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
G P ++ + + +E I
Sbjct: 618 SGAIPNVVCYNTVIAECSRSGLKREAYQI 646
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 14/258 (5%)
Query: 205 MTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV---LL 261
++ V+ L AG+ ++A F G D N+++ L+ S GV L+
Sbjct: 93 LSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLI 152
Query: 262 EFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKD 321
FK + ++N LMN C + A K++ DM+ G +PDV ++ + I YC ++
Sbjct: 153 GFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRE 212
Query: 322 FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL----EVYEKMKSHGIVPDTP 377
+V +EM G PN++T ++++ K + E++E MK+ DT
Sbjct: 213 LEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNE---TDTS 269
Query: 378 F----YSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
+++L+ + + G D ++ E+M V Y MI + C + R A R+
Sbjct: 270 MKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARI 329
Query: 434 LKEMEERSCKPDLETYHP 451
+ M+ + KP +Y+
Sbjct: 330 VYIMKSKGLKPRRTSYNA 347
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 134/322 (41%), Gaps = 44/322 (13%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTK---AGKHEDAIAAFR 226
YN +I L K ++L+EE ++ E + + YT ++ L K GK + +
Sbjct: 345 YNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELM- 403
Query: 227 RMKEFGVDMDTAALNMLMDAL-VKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVR 285
+++ G D T N+ + L V N E + ++ + + + N ++NG C++
Sbjct: 404 -LRKEGADR-TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMG 461
Query: 286 NFDQARKVMEDMKEHGFV-PDVFSYNSFIESYCHDKDFRKVDQVLEE-MSENGCPPNAVT 343
D A KV++DM F PD + N+ + + VL M EN P V
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVA 521
Query: 344 YTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLI-------------------- 383
Y V+ L K + +A+ V+ +++ + D+ Y+ +I
Sbjct: 522 YNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Query: 384 --------FI-------LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREE 428
F+ L ++G L DAC D+ G + +VV YNT+I+ +
Sbjct: 582 WPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKR 641
Query: 429 TALRLLKEMEERSCKPDLETYH 450
A ++L+EM + PD T+
Sbjct: 642 EAYQILEEMRKNGQAPDAVTWR 663
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 131/349 (37%), Gaps = 12/349 (3%)
Query: 188 ELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL 247
+LV +M + T T ++ + + E A F M+ G+ ++ L++L+
Sbjct: 183 KLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGF 242
Query: 248 VKGNSVEHAHGVLLEF------KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHG 301
+K VE ++ E ++ + + +F L++ CR F+ ++ E+M
Sbjct: 243 LKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCE 302
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
V F+Y I+S C + +++ M G P +Y ++ L K G +A
Sbjct: 303 SVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAY 362
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
++ E+ P Y L+ L K A +V E M ++ YN +
Sbjct: 363 QLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGL 422
Query: 422 CAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDL-SPD 480
C L +L M + C+PD T + + M +PD
Sbjct: 423 CVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPD 482
Query: 481 LGTFSLLVHGLRKSGKLDHACSFF-----EELISRGLTPRHGALKQLVK 524
T + ++ GL G+ + A E I G+ + ++ L K
Sbjct: 483 AVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 168 ELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR 227
+YN+ + L N + ++ M + + YT+ V+ L K G+ +DA+
Sbjct: 413 RIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD 472
Query: 228 M--KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNS-----GSFNILMNG 280
M +F D LN +M L+ E A VL ++P N ++N ++ G
Sbjct: 473 MMTGKFCAP-DAVTLNTVMCGLLAQGRAEEALDVL---NRVMPENKIKPGVVAYNAVIRG 528
Query: 281 WCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPN 340
++ D+A V +++ D +Y I+ C + +++ +
Sbjct: 529 LFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHD 588
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
A Y + L ++G LS A + G +P+ Y+++I ++G ++A + E
Sbjct: 589 AFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILE 648
Query: 401 DMPKQGIVRDVVTYNTM 417
+M K G D VT+ +
Sbjct: 649 EMRKNGQAPDAVTWRIL 665
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
RN D+A ++++ + G+ PD + +S I S C F + + +G P+ T
Sbjct: 69 RNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTC 128
Query: 345 TIVMFALGKAGQLSQALEVYEKMKSHG--IVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
+++ L + L V ++ VP Y+ L+ L R+ DA + DM
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDM 188
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
+G + DVVT+ T+I C E A ++ EM +P+
Sbjct: 189 RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPN 231
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 12/268 (4%)
Query: 241 NMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH 300
N+L++ + + A + F+S+ NSGS++ L+ G+ ++A+++ E M E
Sbjct: 200 NVLINGYCRAKDMHMATTL---FRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE- 255
Query: 301 GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
+V S+ + I + D+ EM E G PN T V+ A K+G L
Sbjct: 256 ---KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
+ ++ + +GI D ++L+ + K G L A VF +M +D++++ MI
Sbjct: 313 IRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH----KDILSWTAMIQG 368
Query: 421 ACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM-FKNDLSP 479
H R A++ ++M KPD + + M + P
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 480 DLGTFSLLVHGLRKSGKLDHACSFFEEL 507
L + L+V L ++GKL+ A E +
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENM 456
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 28/331 (8%)
Query: 127 HGFQVSNSSVQQILKRFNNDWVPAFGFFTWAK----TQTGYEHSPEL----YNLMIDILG 178
H FQV S +I K W + AK T + PE ++ +I
Sbjct: 179 HAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYV 238
Query: 179 KSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTA 238
S + +L E M + + + T ++ ++ G +E AI+ + M E G+ +
Sbjct: 239 DSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEY 294
Query: 239 ALNMLMDALVKGNSVEHA---HGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVME 295
+ ++ A K ++ HG +L+ + I L+ L++ + + D A V
Sbjct: 295 TIAAVLSACSKSGALGSGIRIHGYILD--NGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 296 DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
+M D+ S+ + I+ + F + Q +M +G P+ V + V+ A +
Sbjct: 353 NMNH----KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSS 408
Query: 356 QLSQALEVYEKMK-SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTY 414
++ L ++ M+ + I P Y ++ +LG+AG+L +A ++ E+MP I D+ T+
Sbjct: 409 EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTW 465
Query: 415 NTMISTACAHS---REETALRLLKEMEERSC 442
+ AH R E+ + L E++ C
Sbjct: 466 AALYRACKAHKGYRRAESVSQNLLELDPELC 496
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 9/330 (2%)
Query: 120 VAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTG---YEHSPELYNLMIDI 176
V + L +S++ V ++LK + A FF W Y+HS YN + +
Sbjct: 213 VERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRV 272
Query: 177 LGKSKNFDLVWELVEEMAKHEGY-VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDM 235
L + + W +V+EM K GY + L T KV R+ K+ + + + M +
Sbjct: 273 LARPNSVAEFWSVVDEM-KTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKP 331
Query: 236 DTAALNMLMDALVKGNS--VEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARK 292
++L+ L + ++ V +++S L+ ++ + V FD+A +
Sbjct: 332 SIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEE 391
Query: 293 VMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALG 352
+ + M+ G+ PD +Y+ + C K + VL++M GC P+ T+TI++
Sbjct: 392 ITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHC 451
Query: 353 KAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD-V 411
K +L +AL + M G D+ LI + + A +M K V+
Sbjct: 452 KNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQ 511
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERS 441
TY +I + E AL LL+ M++++
Sbjct: 512 STYKLLIDKLLKIKKSEEALDLLQMMKKQN 541
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 16/279 (5%)
Query: 237 TAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRV-RNFDQAR---- 291
T N + L + NSV V+ E K+ +++ ++ + +V R F ++R
Sbjct: 263 TVTYNAALRVLARPNSVAEFWSVVDEMKT------AGYDMDLDTYIKVSRQFQKSRMMAE 316
Query: 292 --KVMEDMKEHGFVPDVFSYNSFIE--SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
K+ E M + F P + + + S + D V +V + G + Y +
Sbjct: 317 TVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGI 376
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+L G+ +A E+ + M++ G PD YS L+F L KA RL++A V + M QG
Sbjct: 377 HRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGC 436
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
D+ T+ +I C ++ + AL M E+ D
Sbjct: 437 FPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASI 496
Query: 468 XXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
M KN ++ P T+ LL+ L K K + A +
Sbjct: 497 FLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQ 535
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/512 (18%), Positives = 187/512 (36%), Gaps = 99/512 (19%)
Query: 53 VKFSDNPTPPNADSDDDFVIPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKE 112
V FS N + P D ++PS W +KP +++ L+ E
Sbjct: 29 VGFSSNLSSP---LDSFAIVPSRFLW-KFRTFSSKP---------------DSMLQLVLE 69
Query: 113 HHSSPELVAQALDGHGFQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNL 172
+ S E V + L +++ + +L++ A+ F W +G S LY++
Sbjct: 70 NDWSKE-VEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSI 128
Query: 173 MIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAF----RRM 228
M+ IL + ++ W + EM + Y+ T + L+K DA+A R +
Sbjct: 129 MLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERML 188
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLI---------------PLNSGS 273
KE + + ++ + + KG+ L E K ++ PL + +
Sbjct: 189 KENAMSVVAGEVSAV---VTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALA 245
Query: 274 F--------------------NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFI 313
F N + R + + V+++MK G+ D+ +Y
Sbjct: 246 FFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVS 305
Query: 314 ESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ--LSQALEVYEKMKSHG 371
+ + + ++ E M + P+ ++++ L + L V K +S G
Sbjct: 306 RQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTG 365
Query: 372 IVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL 431
Y + L GR +A ++ + M G D +TY+ ++ C R E A
Sbjct: 366 KSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEAR 425
Query: 432 RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGL 491
+L +ME + C PD++ T+++L+ G
Sbjct: 426 GVLDQMEAQGCFPDIK-----------------------------------TWTILIQGH 450
Query: 492 RKSGKLDHACSFFEELISRGLTPRHGALKQLV 523
K+ +LD A + F ++ +G L L+
Sbjct: 451 CKNNELDKALACFANMLEKGFDIDSNLLDVLI 482
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 155 TWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTK 214
T A GYE Y+ ++ L K+K + ++++M + + T T +++ K
Sbjct: 393 TKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCK 452
Query: 215 AGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF---KSLIPLNS 271
+ + A+A F M E G D+D+ L++L+D V N E A L+E ++ P S
Sbjct: 453 NNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQS 512
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++ +L++ +++ ++A +++ MK+ + +++ ++ + +D +K VL
Sbjct: 513 -TYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSS 571
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQA 360
P+ Y V+ A + G+L+ A
Sbjct: 572 KD----SPSFAAYFHVIEAFYREGRLTDA 596
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 51/311 (16%)
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
+F + D ++ L+D K V +A V F L + FN +++G+ D+
Sbjct: 145 KFSYESDAFIVSSLIDMYSKFGEVGNARKV---FSDLGEQDLVVFNAMISGYANNSQADE 201
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A +++DMK G PDV ++N+ I + H ++ KV ++LE M +G P+ V++T ++
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTP-------------------------------- 377
L Q +A + +++M +HG+ P++
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLED 321
Query: 378 ---FYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
S+L+ + GK G + +A +F PK + VT+N+MI H + A+ L
Sbjct: 322 HGFVRSALLDMYGKCGFISEAMILFRKTPK----KTTVTFNSMIFCYANHGLADKAVELF 377
Query: 435 KEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMF-----KNDLSPDLGTFSLLVH 489
+ME K D H +++F K + P L ++ +V
Sbjct: 378 DQMEATGEKLD----HLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVD 433
Query: 490 GLRKSGKLDHA 500
L ++GKL A
Sbjct: 434 LLGRAGKLVEA 444
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRL 433
D SSLI + K G + +A VF D+ +Q D+V +N MIS +S+ + AL L
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNL 205
Query: 434 LKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRK 493
+K+M+ KPD+ T++ E M + PD+ +++ ++ GL
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVH 265
Query: 494 SGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
+ + + A F+++++ GL P + L+ + +K + I
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 150/359 (41%), Gaps = 30/359 (8%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G + P L +I + + D ++ ++ K T+Y + R LT AG E+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKR----TIYVWNALFRALTLAGHGEEV 162
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDA----------LVKGNSVEHAHGVLLEFKSLIPLNS 271
+ + +M GV+ D ++ A L+KG + HAH + S + +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEI-HAHLTRRGYSSHVYI-- 219
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD-KDFRKVDQVLE 330
L++ + R D A V M V +V S+++ I Y + K F + E
Sbjct: 220 --MTTLVDMYARFGCVDYASYVFGGMP----VRNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 331 EMSENG-CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKA 389
M E PN+VT V+ A L Q ++ + G+ P S+L+ + G+
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
G+L+ VF+ M RDVV++N++IS+ H + A+++ +EM P T+
Sbjct: 334 GKLEVGQRVFDRMHD----RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTF 389
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
E M+++ + P + ++ +V L ++ +LD A +++
Sbjct: 390 VSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 160/364 (43%), Gaps = 33/364 (9%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLV-----WELVEEMAKHEGYVTLYTMTKVLRRLT 213
Q+G + + + ++D LG+ +++ W ++ KH + + TK+L L
Sbjct: 209 NQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKH--LRSRFVYTKLLSVLG 266
Query: 214 KAGKHEDAIAAFRRM---KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLN 270
A + ++A+ F +M ++ DM AA + + A+ G + G+L E +I
Sbjct: 267 FARRPQEALQIFNQMLGDRQLYPDM--AAYHCI--AVTLGQA-----GLLKELLKVIERM 317
Query: 271 SGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLE 330
L R +N+D V+E PD+ YN+ + + ++ V V
Sbjct: 318 RQKPTKLTKN-LRQKNWD---PVLE--------PDLVVYNAILNACVPTLQWKAVSWVFV 365
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
E+ +NG PN TY + M + ++G+ + + + KMKS G P Y L+ L + G
Sbjct: 366 ELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREG 425
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEE-RSCKPDLETY 449
++++A + DM ++G++ Y + C + R A+ + M+ +C+P T+
Sbjct: 426 KIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITF 485
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
++M K+ P++GT ++++ ++ A FEE++S
Sbjct: 486 TGLIAASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVS 544
Query: 510 RGLT 513
R T
Sbjct: 545 RKET 548
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 29/197 (14%)
Query: 343 TYTIVMFALGKAGQLSQALEVYEKM-KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
YT ++ LG A + +AL+++ +M + PD Y + LG+AG LK+ V E
Sbjct: 257 VYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIER 316
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS----CKPDLETYHPXXXXXX 457
M ++ +L K + +++ +PDL Y+
Sbjct: 317 MRQK------------------------PTKLTKNLRQKNWDPVLEPDLVVYNAILNACV 352
Query: 458 XXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHG 517
+ KN L P+ T+ L + + +SGK D FF ++ S G P+
Sbjct: 353 PTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAI 412
Query: 518 ALKQLVKDLEAKSMLKE 534
K LV+ L + ++E
Sbjct: 413 TYKVLVRALWREGKIEE 429
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 14/274 (5%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y L ++++ +S FD V + +M T ++R L + GK E+A+ A R M+
Sbjct: 379 YGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDME 438
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAH---GVLLEFKSLIPLN---SGSFNILMNGWCR 283
+ GV + L L A G + ++ PL +G +NG
Sbjct: 439 QKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNG--- 495
Query: 284 VRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM---SENGCPPN 340
+ D + + MK+ P++ + N ++ Y + F + ++ EE+ E PN
Sbjct: 496 -GHVDDCMAIFQYMKDK-CDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPN 553
Query: 341 AVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFE 400
TY+ ++ A ++ Q VY+ M G D ++S++ +AG+ F+
Sbjct: 554 EYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFD 613
Query: 401 DMPKQGIVRDVVTYNTMISTACAHSREETALRLL 434
+ + G + + + ++ A A + A+ L+
Sbjct: 614 AVLEDGEIPHPLFFTELLCHATAKGDFQRAITLI 647
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 159/369 (43%), Gaps = 7/369 (1%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N ++ + +S N++ EL EM TM K+L+ + + +
Sbjct: 57 WNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
G++ + + N L+ + +E + V F S+ N S+N +++ + ++ D
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKV---FNSMKDRNLSSWNSILSSYTKLGYVDD 173
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A ++++M+ G PD+ ++NS + Y + VL+ M G P+ + + ++
Sbjct: 174 AIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQ 233
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
A+ + G L ++ + + + D ++LI + K G L A VF+ M +
Sbjct: 234 AVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD----AK 289
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
++V +N+++S + A L+ ME+ KPD T++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAK 529
M + ++P++ +++ + G K+G +A F ++ G+ P + L+K L
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 530 SMLKEKEHI 538
S+L + +
Sbjct: 410 SLLHSGKEV 418
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 137/346 (39%), Gaps = 37/346 (10%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HG 258
+ T +L G +DAIA +RM+ G+ T++++ L+ A+ + ++ HG
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 259 VLLE-----------------------------FKSLIPLNSGSFNILMNGWCRVRNFDQ 289
+L F + N ++N L++G
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A +M M++ G PD ++NS Y K V+ +M E G PN V++T +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
K G AL+V+ KM+ G+ P+ S+L+ ILG L +V ++ ++
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
D ++ ++A+ + ++ +S L +++
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKS----LASWNCMLMGYAMFGRGEEGIAAF 485
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISR-GLTP 514
M + + PD TF+ ++ + SG + +F+ + SR G+ P
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 31/283 (10%)
Query: 154 FTWAKTQTGYE--HSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRR 211
TW +GY PE +D++GK K + +V + T +
Sbjct: 327 ITWNSLASGYATLGKPEK---ALDVIGKMKEKGVAPNVV-------------SWTAIFSG 370
Query: 212 LTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLM---DALVKGNSVEHAHGVLLEFKSLIP 268
+K G +A+ F +M+E GV + A ++ L+ L +S + HG L K+LI
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR-KNLI- 428
Query: 269 LNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQV 328
++ L++ + + + A ++ +K S+N + Y +
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAA 484
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFILG 387
M E G P+A+T+T V+ +G + + + ++ M+S +GI+P S ++ +LG
Sbjct: 485 FSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLG 544
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETA 430
++G L +A D + M + D + +S+ H E A
Sbjct: 545 RSGYLDEAWDFIQTMS---LKPDATIWGAFLSSCKIHRDLELA 584
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 203 YTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE 262
YT VL+ K+ ++ + + G D+D L+ V+ +E AH V
Sbjct: 135 YTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV--- 191
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
F + S+ L+ G+ + A+K+ +++ V DV S+N+ I Y ++
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNY 247
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
++ ++ ++M + P+ T V+ A ++G + +V+ + HG + ++L
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 307
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
I + K G L+ AC +FE +P +DV+++NT+I + + AL L +EM
Sbjct: 308 IDLYSKCGELETACGLFERLP----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 443 KPD 445
P+
Sbjct: 364 TPN 366
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 125/283 (44%), Gaps = 12/283 (4%)
Query: 227 RMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRN 286
+M + G+ AL+ L++ + E + FK++ N +N + G +
Sbjct: 55 QMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD 114
Query: 287 FDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
A K+ M G +P+ +++ ++S K F++ Q+ + + GC + +T
Sbjct: 115 PVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
++ + G+L A +V++K +V Y++LI G +++A +F+++P
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVS----YTALIKGYASRGYIENAQKLFDEIP--- 227
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
V+DVV++N MIS + AL L K+M + + +PD T
Sbjct: 228 -VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM--VTVVSACAQSGSIEL 284
Query: 467 XXXEHMFKND--LSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
H++ +D +L + L+ K G+L+ AC FE L
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 213 TKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLL-----EFKSLI 267
+ G +++A+ F+ M + V D + + ++ A + S+E V L F S
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS-- 299
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
N N L++ + + + A + E + DV S+N+ I Y H +++
Sbjct: 300 --NLKIVNALIDLYSKCGELETACGLFERLP----YKDVISWNTLIGGYTHMNLYKEALL 353
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAG--QLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
+ +EM +G PN VT ++ A G + + + VY + G+ + +SLI +
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
K G ++ A VF + + + + ++N MI H R + + L M + +PD
Sbjct: 414 YAKCGDIEAAHQVFNSI----LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 446 LETY 449
T+
Sbjct: 470 DITF 473
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 14/260 (5%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N MI ++ N+ EL ++M K TM V+ ++G E +
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNF 287
+ G + +N L+D K +E A G+ L +K +I S+N L+ G+ + +
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI-----SWNTLIGGYTHMNLY 348
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCH--DKDFRKVDQVLEEMSENGCPPNAVTYT 345
+A + ++M G P+ + S + + H D + V + G + T
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++ K G + A +V+ + + ++++IF GR + D+F M K
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSS----WNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 406 GIVRDVVTYNTMISTACAHS 425
GI D +T+ ++S AC+HS
Sbjct: 465 GIQPDDITFVGLLS-ACSHS 483
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 145/356 (40%), Gaps = 22/356 (6%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
T+ G E P + +I + K ++ EE + Y ++ T K
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYN--ALISGYTANSKV 137
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLM------DALVKGNSVEHAHGVLLEFKSLIPLNSG 272
DA FRRMKE GV +D+ + L+ + L G S+ H V S + +
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSL-HGQCVKGGLDSEVAV--- 193
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
N + + + + + R++ ++M G + ++N+ I Y + V ++ E+M
Sbjct: 194 -LNSFITMYMKCGSVEAGRRLFDEMPVKGLI----TWNAVISGYSQNGLAYDVLELYEQM 248
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
+G P+ T V+ + G EV + ++S+G VP+ ++ I + + G L
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPX 452
A VF+ MP V+ +V++ MI H E L L +M +R +PD +
Sbjct: 309 AKARAVFDIMP----VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 453 XXXXXXXXXXXXXXXXXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
M + L P +S LV L ++G+LD A F E +
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESM 420
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL--VKGNSVEHAHGV 259
L T V+ ++ G D + + +MK GV D L ++ + + + H G
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 260 LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
L+E +P N N ++ + R N +AR V + M V + S+ + I Y
Sbjct: 282 LVESNGFVP-NVFVSNASISMYARCGNLAKARAVFDIMP----VKSLVSWTAMIGCYGMH 336
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK-SHGIVPDTPF 378
+ ++M + G P+ + +V+ A +G + LE++ MK + + P
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 379 YSSLIFILGKAGRLKDACDVFEDMP 403
YS L+ +LG+AGRL +A + E MP
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMP 421
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/442 (19%), Positives = 171/442 (38%), Gaps = 60/442 (13%)
Query: 69 DFVIPSLAHWVDAHILDAKPKLVTPTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHG 128
D + SL H + H+L + +LV+ N + H +
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFA------------------------- 202
Query: 129 FQVSNSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWE 188
S ++ K F D P +W GY+ +G+++ V++
Sbjct: 203 ---SCGDMENARKVF--DESPVRDLVSWNCLINGYKK-----------IGEAEKAIYVYK 246
Query: 189 LVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALV 248
L+E VT+ + L + ++ + +KE G+ M +N LMD
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF---YEYVKENGLRMTIPLVNALMDMFS 303
Query: 249 KGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDV 306
K + A + LE ++++ S+ +++G+ R D +RK+ +DM+E DV
Sbjct: 304 KCGDIHEARRIFDNLEKRTIV-----SWTTMISGYARCGLLDVSRKLFDDMEE----KDV 354
Query: 307 FSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
+N+ I K + + +EM + P+ +T + A + G L + ++
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
++ + + + +SL+ + K G + +A VF + R+ +TY +I H
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ----TRNSLTYTAIIGGLALHGD 470
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM-FKNDLSPDLGTFS 485
TA+ EM + PD T+ M + +L+P L +S
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530
Query: 486 LLVHGLRKSGKLDHACSFFEEL 507
++V L ++G L+ A E +
Sbjct: 531 IMVDLLGRAGLLEEADRLMESM 552
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 32/292 (10%)
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
+ + ARKV ++ V D+ S+N I Y + K V + M G P+ VT
Sbjct: 206 DMENARKVFDESP----VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 261
Query: 346 IVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++ + G L++ E YE +K +G+ P ++L+ + K G + +A +F+++ K+
Sbjct: 262 GLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
Query: 406 GIV---------------------------RDVVTYNTMISTACAHSREETALRLLKEME 438
IV +DVV +N MI + R + AL L +EM+
Sbjct: 322 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 381
Query: 439 ERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLD 498
+ KPD T ++ K LS ++ + LV K G +
Sbjct: 382 TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 499 HACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKE-KEHIEKLMTPPSIRF 549
A S F + +R + L +A + + E I+ + P I F
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 493
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 103/272 (37%), Gaps = 42/272 (15%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
L+N MI ++K L +EM TM L ++ G + I R +
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFD 288
+++ + ++ A L+D K ++ A V F + NS ++ ++ G
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSV---FHGIQTRNSLTYTAIIGG-------- 464
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+ HG SY EM + G P+ +T+ ++
Sbjct: 465 --------LALHGDASTAISY-------------------FNEMIDAGIAPDEITFIGLL 497
Query: 349 FALGKAGQLSQALEVYEKMKSH-GIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
A G + + + +MKS + P YS ++ +LG+AG L++A + E MP +
Sbjct: 498 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA- 556
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEE 439
D + ++ H E + K++ E
Sbjct: 557 --DAAVWGALLFGCRMHGNVELGEKAAKKLLE 586
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 37/270 (13%)
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP---PNA 341
R D + K+++ ++ P++FS+N I + ++ ++ + ++M +GC P+
Sbjct: 101 RYLDYSVKILKGIEN----PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDH 156
Query: 342 VTYTIVM-----FALGKAGQ--LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
TY ++ L G L L++ ++ SH +++ I + G +++
Sbjct: 157 FTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSH-------VHNASIHMFASCGDMEN 209
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
A VF++ P VRD+V++N +I+ E A+ + K ME KPD T
Sbjct: 210 ARKVFDESP----VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVS 265
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT- 513
E++ +N L + + L+ K G + A F+ L R +
Sbjct: 266 SCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS 325
Query: 514 --------PRHGAL---KQLVKDLEAKSML 532
R G L ++L D+E K ++
Sbjct: 326 WTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 2/255 (0%)
Query: 248 VKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDM-KEHGFVPD 305
+ N ++H+ V + + I S N L+ +++ +A++V +M K +G PD
Sbjct: 127 AQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPD 186
Query: 306 VFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYE 365
+ +YN I+ +C ++ EM G PN+ ++ +++ + + +V
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLA 246
Query: 366 KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHS 425
MK G+ Y+ I L K + K+A + + M G+ + VTY+ +I C
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 426 REETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFS 485
E A +L K M R CKPD E Y + + + P
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMK 366
Query: 486 LLVHGLRKSGKLDHA 500
LV+GL K K++ A
Sbjct: 367 SLVNGLAKDSKVEEA 381
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 129/270 (47%), Gaps = 4/270 (1%)
Query: 174 IDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM-KEFG 232
I + ++ D + ++ K E T+ ++ +L A +++A + M K +G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 233 VDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQA 290
++ D N ++ + S ++ ++ +E K + P NS SF ++++G+ D+
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKP-NSSSFGLMISGFYAEDKSDEV 241
Query: 291 RKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFA 350
KV+ MK+ G V +YN I+S C K ++ +L+ M G PN VTY+ ++
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 351 LGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRD 410
+A ++++ M + G PD+ Y +LI+ L K G + A + ++ ++ V
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 411 VVTYNTMISTACAHSREETALRLLKEMEER 440
++++ S+ E A L+ +++E+
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 150/352 (42%), Gaps = 13/352 (3%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N MI+ + + D EL ++M + + TM VL K E ++
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQ 289
E V+++ N ++D K S+E A + F ++ ++ ++ +++G+ +++
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRL---FDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS-ENGCPPNAVTYTIVM 348
AR+V+ M + D+ ++N+ I +Y + + V E+ + N +T +
Sbjct: 317 AREVLNSMPQ----KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A + G L ++ +K HGI + S+LI + K G L+ + +VF + K
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK---- 428
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
RDV ++ MI H A+ + +M+E + KP+ T+
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 469 XEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGAL 519
M N + P+ ++ +V L +SG L+ A F E + T GAL
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGAL 540
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 9/202 (4%)
Query: 243 LMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGF 302
L++ V ++ HG ++ + S S M + + ARKV +++ +
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK--- 92
Query: 303 VPDVFSYNSFIESYCHDKD-FRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQAL 361
P+ F++N+ I +Y D + L+ +SE+ C PN T+ ++ A + LS
Sbjct: 93 -PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 362 EVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTA 421
++ + D +SLI G L AC VF + + +DVV++N+MI+
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE----KDVVSWNSMINGF 207
Query: 422 CAHSREETALRLLKEMEERSCK 443
+ AL L K+ME K
Sbjct: 208 VQKGSPDKALELFKKMESEDVK 229
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N MID +S D ++ ++M + + L + T ++ K G E+A+ FR M+
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMPERD----LISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 230 EFGVDMDTAALNMLMDALVKGNSVE-----HAHGVLLEFKSLIPLNSGSFNILMNGWCRV 284
GV D A+ ++A ++ H + + +FK+ + ++ N L++ +CR
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS----NSLIDLYCRC 254
Query: 285 RNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTY 344
+ AR+V +M++ V S+NS I + + + + +M E G P+AVT+
Sbjct: 255 GCVEFARQVFYNMEKR----TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
Query: 345 TIVMFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
T + A G + + L ++ MK + I P Y L+ + +AGRL+DA + + MP
Sbjct: 311 TGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP 370
Query: 404 KQGIVRDVVTYNTMISTACAHSREETAL--RLLKEMEERSCKP 444
+ + V ++++ AC++ L RL+K + + + K
Sbjct: 371 MK---PNEVVIGSLLA-ACSNHGNNIVLAERLMKHLTDLNVKS 409
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
L F + NS ++N +++G+ R D A K+ + M E D+ S+ + I +
Sbjct: 130 LVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKG 185
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ EM +G P+ V + A G LS L V+ + S + +
Sbjct: 186 YQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
SLI + + G ++ A VF +M K R VV++N++I A+ +L ++M+E+
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEK----RTVVSWNSVIVGFAANGNAHESLVYFRKMQEK 301
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND--LSPDLGTFSLLVHGLRKSGKLD 498
KPD T+ + M K D +SP + + LV ++G+L+
Sbjct: 302 GFKPDAVTFTGALTACSHVGLVEEGLRYFQIM-KCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 499 HACSFFEEL 507
A + +
Sbjct: 361 DALKLVQSM 369
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 327 QVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFIL 386
++ EMS+ G N VTYT ++ L +AG A E++++M S G+ PD Y+ L+ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 387 GK---------AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
K AG+++D D+F + +G+ +VVTY TMIS C +E A L ++M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 438 EERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKL 497
+E PD TY+ + M + D T+ L+ L G+L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH-DGRL 180
Query: 498 DHACSFFEELIS 509
D F E++S
Sbjct: 181 DKG---FLEMLS 189
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 188 ELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDAL 247
EL EM++ T T +++ L +AG + A F+ M GV D N+L+D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 248 VKGNSVEHA--HGVL---------LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMED 296
K +E A G + L K + P N ++ +++G+C+ ++A +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKP-NVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
MKE G +PD +YN+ I ++ D D ++++EM +A TY +V
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
+E++ +M G+V +T Y++LI L +AG A ++F++M G+ D++TYN ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 421 ACAHSREETAL---------RLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
C + + E AL L + + KP++ TY
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
M ++ PD GT++ L+ + G + +E+ S
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 73/136 (53%)
Query: 304 PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV 363
P +YNS I+ +C ++L+ M+ GC P+ VT++ ++ KA ++ +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 364 YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
+ +M GIV +T Y++LI + G L A D+ +M G+ D +T++ M++ C+
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 424 HSREETALRLLKEMEE 439
A +L+++++
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 273 SFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM 332
++N +++G+C+ D A+++++ M G PDV ++++ I YC K ++ EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 333 SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRL 392
G N VTYT ++ + G L A ++ +M S G+ PD + ++ L L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 393 KDACDVFEDMPK 404
+ A + ED+ K
Sbjct: 132 RKAFAILEDLQK 143
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
P +TY ++ K ++ A + + M S G PD +S+LI KA R+ + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 399 FEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYH 450
F +M ++GIV + VTY T+I C + A LL EM PD T+H
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%)
Query: 402 MPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXX 461
M + I +TYN+MI C R + A R+L M + C PD+ T+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 462 XXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQ 521
M + + + T++ L+HG + G LD A E+IS G+ P +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 522 LVKDLEAKSMLKE 534
++ L +K L++
Sbjct: 121 MLAGLCSKKELRK 133
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
T T ++ K + +DA M G D + L++ K V++ +
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 261 LEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
E + I N+ ++ L++G+C+V + D A+ ++ +M G PD +++ + C
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 320 KDFRKVDQVLEEMSEN 335
K+ RK +LE++ ++
Sbjct: 129 KELRKAFAILEDLQKS 144
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 225 FRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL--LEFKSLIPLNSGSFNILMNGWC 282
F+ M+E +DMDTA N+++ L K + A + L L P + ++N+++
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQP-DVQTYNMMI---- 56
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
R + +A K+ +M G VPD +YNS I C + +V + S
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS--------- 107
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
T+ ++ KA ++ + ++ +M GIV + Y++LI + G A D+F++M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLL 434
G+ +T+ ++ C+ A+ +L
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI--LGKA 389
M E+ + Y I++ L KAG+ +A ++ + G+ PD Y+ +I LG+A
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRA 64
Query: 390 GRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
+L + +M ++G+V D +TYN+MI C ++ A ++ +SC T+
Sbjct: 65 EKL------YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-----SKSC----STF 109
Query: 450 HPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELIS 509
+ M++ + ++ T++ L+HG R+ G + A F+E++S
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 510 RGLTPRHGALKQLVKDLEAKSMLKE 534
G+ + ++ L ++ L++
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRK 194
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 16/196 (8%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEM--AKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRR 227
YN++I L K+ FD + + + + V Y M + R + G+ E A R
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNM---MIRFSSLGRAEKLYAEMIR 73
Query: 228 MKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNF 287
G+ DT N ++ L K N + A V + +FN L+NG+C+
Sbjct: 74 R---GLVPDTITYNSMIHGLCKQNKLAQARKV--------SKSCSTFNTLINGYCKATRV 122
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIV 347
+ +M G V +V +Y + I + DF + +EM NG +++T+ +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 348 MFALGKAGQLSQALEV 363
+ L +L +A+ +
Sbjct: 183 LPQLCSRKELRKAVAM 198
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/419 (18%), Positives = 163/419 (38%), Gaps = 65/419 (15%)
Query: 166 SPELY--NLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA-- 221
+P +Y MID+ G ++ + E++ K +Y V+ L H+
Sbjct: 264 TPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY----VINSLMNVNSHDLGYT 319
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK-----SLIPLNSGSFNI 276
+ ++ M+ V D + N+L+ V+ A + E K L+ L++ ++
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
++ + + + A KV +DMK G P+ +++S I + + + + + EEM +G
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR----- 391
C PN+ + I++ A +A Q +A +++ K + + Y+ I G+
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSV--NESLYADDIVSKGRTSSPNILK 497
Query: 392 ----------------------------------LKDAC--------DVFEDMPKQGIVR 409
L AC ++ ++M G+
Sbjct: 498 NNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSP 557
Query: 410 DVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXX 469
+ +T++T+I E A+R+L+ M +PD+ Y
Sbjct: 558 NQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLF 617
Query: 470 EHMFKNDLSPDLGTFSLLVHGLRKSGKL---DHACSFFEELISRGLTPRHGALKQLVKD 525
E M + + P+ T++ L+ K G L + ++++ + G P LK+L+++
Sbjct: 618 EEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEE 676
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 100/249 (40%), Gaps = 6/249 (2%)
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
+ + L+P +++G+ + + E K+ P+++ + I+
Sbjct: 222 IRYACLLPHTELLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCG 281
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
D+ K + E++ + PN Y I + L L+VY+ M+ + D Y+
Sbjct: 282 DYVKSRYIYEDLLKENIKPN--IYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYN 339
Query: 381 SLIFILGKAGRLKDACDVFED---MPKQGIVR-DVVTYNTMISTACAHSREETALRLLKE 436
L+ AGR+ A D++++ M G+++ D TY T+I + AL++ +
Sbjct: 340 ILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDD 399
Query: 437 MEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGK 496
M+ P+ T+ E M + P+ F++L+H ++ +
Sbjct: 400 MKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQ 459
Query: 497 LDHACSFFE 505
D A F+
Sbjct: 460 YDRAFRLFQ 468
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 14/248 (5%)
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLE 262
T + + G+ +A FR M G +D+ + L+ A + +++H HG +
Sbjct: 204 TAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIR 263
Query: 263 FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
S + LN G N + + + + D A V +M DV S++S I Y D D
Sbjct: 264 RCSCLGLNLG--NAITDMYVKCSILDYAHTVFVNMSRR----DVISWSSLILGYGLDGDV 317
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSL 382
++ +EM + G PNAVT+ V+ A G + ++ + M+ + IVP+ Y+S+
Sbjct: 318 VMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASV 377
Query: 383 IFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSC 442
+ +AG L++A EDMP + D ++S + E R+ +E+ +
Sbjct: 378 ADCMSRAGLLEEAEKFLEDMP---VKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ--L 432
Query: 443 KPDLETYH 450
KP +Y+
Sbjct: 433 KPRKASYY 440
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 29/323 (8%)
Query: 153 FFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRL 212
F + K+ +P +++L+I SK D ++ ++ + T ++
Sbjct: 148 FRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALI--- 204
Query: 213 TKAGKHEDAIAAFRRMKE-FGVD---MDTA------------ALNMLMDALVKGNSVEHA 256
T+ + A ++ +E FG+D +D A N +M + + E
Sbjct: 205 TEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMV 264
Query: 257 HGVLLEFKSLIPL--NSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE 314
+ E + + N S+N+LM +C +A KV E+MK G V D+ +YN+ I
Sbjct: 265 ERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIG 324
Query: 315 SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP 374
C + + K ++ +M G +TY ++ KAG + L VY +MK G
Sbjct: 325 GLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEA 384
Query: 375 DTPFYSSLIFILG---KAGRLKDACDVFEDMPKQGIV---RDVVTYNTMISTACAHSREE 428
D +L+ L R+ +A D+ +D ++ + R+ Y ++ C + +
Sbjct: 385 DGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNC--YELLVKRLCEDGKMD 442
Query: 429 TALRLLKEMEERSCKPDLETYHP 451
AL + EM + KP ETY
Sbjct: 443 RALNIQAEMVGKGFKPSQETYRA 465
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 174 IDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM-KEFG 232
I + G++ D + + ++E T+ ++ +L A +++A + M K +G
Sbjct: 118 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG 177
Query: 233 VDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQAR 291
++ D N ++ L + S ++ ++ E + I + SF ++++G+ + FD+ R
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 292 KVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFAL 351
KVM M E G V +YN I+ C K + +++ + PN+VTY++++
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
L +A+ ++E M +G PD+ Y +LI L K G + A + + ++ V
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 412 VTYNTMISTACAHSREETALRLLKEMEER 440
+++ + S+ + A L+ ++E+
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
Query: 214 KAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSL--IPLNS 271
+A + +I FR ++++ + +LN L+ A + + A+ V LE + I +
Sbjct: 123 RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDL 182
Query: 272 GSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEE 331
++N ++ C + + ++ +M+ P S+ I+ + ++ F +V +V+
Sbjct: 183 ETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRM 242
Query: 332 MSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGR 391
M E G TY I++ L K + ++A + + + S + P++ YS LI
Sbjct: 243 MDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEEN 302
Query: 392 LKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
L +A ++FE M G D Y T+I C ETAL L +E E++ P
Sbjct: 303 LDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVP 355
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 5/244 (2%)
Query: 267 IPLNSGSFNILMNGWCRVRNFDQARKVMEDM-KEHGFVPDVFSYNSFIESYCHDKDFRKV 325
IP S N L+ +++ +A +V +M K +G PD+ +YN I C
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 326 DQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFI 385
++ EM P A ++ +++ K + + +V M G+ Y+ +I
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 386 LGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
L K + +A + + + + + VTY+ +I C+ + A+ L + M KPD
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 446 LETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFE 505
E Y + + P LV+GL K+D A +
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEA----K 377
Query: 506 ELIS 509
ELI+
Sbjct: 378 ELIA 381
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 108/264 (40%), Gaps = 3/264 (1%)
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE- 334
I++ G R D++ + +++++ V S N+ + + KD+++ ++V EM +
Sbjct: 118 IILYG--RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKM 175
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
G P+ TY ++ L ++G S + + +M+ I P + +I K + +
Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDE 235
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXX 454
V M + G+ V TYN MI C + A L+ + +P+ TY
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIH 295
Query: 455 XXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTP 514
E M N PD + L+H L K G + A E + + P
Sbjct: 296 GFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVP 355
Query: 515 RHGALKQLVKDLEAKSMLKEKEHI 538
+K LV L ++S + E + +
Sbjct: 356 SFSVMKWLVNGLASRSKVDEAKEL 379
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 124/303 (40%), Gaps = 13/303 (4%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSV---EHAHGVLLEFK 264
++ L K+G +I F++M GV+MD+ + + + SV E HG +L K
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL--K 223
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
S + N L+ + + + D ARKV ++M E DV S+NS I Y + K
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAEK 279
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
V +M +G + T V + +S V+ + F ++L+
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
+ K G L A VF +M R VV+Y +MI+ A++L +EMEE P
Sbjct: 340 MYSKCGDLDSAKAVFREMSD----RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFF 504
D+ T E + +NDL D+ + L+ K G + A F
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 505 EEL 507
E+
Sbjct: 456 SEM 458
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 148/361 (40%), Gaps = 22/361 (6%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
++G+ + N ++ K++ D ++ +EM + + + + ++ G E
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD----VISWNSIINGYVSNGLAE 278
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLMDA-----LVKGNSVEHAHGVLLEFKSLIPLNSGSF 274
++ F +M G+++D A + + L+ H+ GV K+
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV----KACFSREDRFC 334
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
N L++ + + + D A+ V +M + V SY S I Y + + ++ EEM E
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
G P+ T T V+ + L + V+E +K + + D ++L+ + K G +++
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLK-EMEERSCKPDLETYHPXX 453
A VF +M V+D++++NT+I + AL L +EE+ PD T
Sbjct: 451 AELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLT 513
++ +N D + LV K G L A F+++ S+ L
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 514 P 514
Sbjct: 567 S 567
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 121/295 (41%), Gaps = 26/295 (8%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
+ + N ++D+ K + D + EM+ ++ + T ++ + G
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGLA 378
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNI-- 276
+A+ F M+E G+ D + +++ + ++ V I N F+I
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV----HEWIKENDLGFDIFV 434
Query: 277 ---LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESY---CHDKDFRKVDQVLE 330
LM+ + + + +A V +M+ V D+ S+N+ I Y C+ + + +L
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 331 EMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAG 390
E E P+ T V+ A + E++ + +G D +SL+ + K G
Sbjct: 491 E--EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 391 RLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
L A +F+D+ +D+V++ MI+ H + A+ L +M + + D
Sbjct: 549 ALLLAHMLFDDIAS----KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 599
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 19/284 (6%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMA-KHEGYVTLYTMTKVLRRLTKAGK 217
+ G++ + N +ID+ K + D +L E++ K+E V+ T+ L + GK
Sbjct: 375 VKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE--VSWNTVIVGYENLGEGGK 432
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVE---HAHGVLLEFKSLIPLNSGSF 274
A + FR V + + + A S++ HG L K+
Sbjct: 433 ---AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG--LAIKTNNAKKVAVS 487
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
N L++ + + + A+ V +M+ DV S+N+ I Y R+ ++L+ M +
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEME----TIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM-KSHGIVPDTPFYSSLIFILGKAGRLK 393
C PN +T+ V+ AG + Q E +E M + HGI P Y+ ++ +LG++G+L
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEM 437
A + E +P + V+ + M+S + + EE A R +E+
Sbjct: 604 KAMKLIEGIPYE---PSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 150/368 (40%), Gaps = 24/368 (6%)
Query: 150 AFGFFTWAKT------QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLY 203
G F +AK +T Y P + ++ + + + +++ EM K++ +
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKND----VV 314
Query: 204 TMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSV---EHAHGVL 260
+ ++ R + G +A+ F RM+E V + L+ +++ G E HG++
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV 374
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
+ K L+ N L++ + + D A K+ ++ V S+N+ I Y +
Sbjct: 375 V--KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV----SWNTVIVGYENLG 428
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ K + E N VT++ + A + ++V+ +
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
SLI + K G +K A VF +M DV ++N +IS H ALR+L M++R
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEME----TIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDH 499
CKP+ T+ E M ++ + P L ++ +V L +SG+LD
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 500 ACSFFEEL 507
A E +
Sbjct: 605 AMKLIEGI 612
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDA 221
G E + + ++D+ K + + W + E + V +MT +L L + G E+A
Sbjct: 286 GIESELCIESALMDMYSKCGSIEDAWTIFESTTE----VDEVSMTVILVGLAQNGSEEEA 341
Query: 222 IAAFRRMKEFGVDMDTAALNMLMDALVKGNSV---EHAHGVLLEFKSLIPLNSGSFNILM 278
I F RM + GV++D ++ ++ NS+ + H ++++ K N+ N L+
Sbjct: 342 IQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK--FSGNTFVNNGLI 399
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
N + + + ++ V M + +V S+NS I ++ ++ EEM+
Sbjct: 400 NMYSKCGDLTDSQTVFRRMPKRNYV----SWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFILGKAGRLKDACD 397
P VT+ ++ A G + + E+ +MK HGI P T Y+ +I +LG+AG LK+A
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 398 VFEDMP 403
+ +P
Sbjct: 516 FIDSLP 521
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 117/242 (48%), Gaps = 20/242 (8%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+YN+++ + +S FD ++ + M++ + T ++ L+K + + FR+M
Sbjct: 273 VYNVLLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFNLFRKM 328
Query: 229 KEFGVDMDTAALNMLM------DALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWC 282
+E + A L ++ AL+ G + HA + + K +PL N LM+ +
Sbjct: 329 QEEMIGFSWATLTTILPACSRVAALLTGKEI-HAQILKSKEKPDVPL----LNSLMDMYG 383
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
+ + +R+V + M D+ S+N + Y + + +V + E M E+G P+ +
Sbjct: 384 KCGEVEYSRRVFDVM----LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSH-GIVPDTPFYSSLIFILGKAGRLKDACDVFED 401
T+ ++ G L ++E+MK+ + P Y+ L+ ILG+AG++K+A V E
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 402 MP 403
MP
Sbjct: 500 MP 501
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 143/346 (41%), Gaps = 11/346 (3%)
Query: 164 EHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIA 223
H+P+L + +I + + DL ++ +++ +T + ++ G DA+
Sbjct: 164 RHNPKLLSKLITLFSVCRRLDLARKIFDDVTD-SSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 224 AFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWC 282
+ M ++ ++++ + A V + G+ + K ++ +N+L+ +
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYM 282
Query: 283 RVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAV 342
FD ARKV + M E +V ++NS I ++ + +M E +
Sbjct: 283 ESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA 338
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
T T ++ A + L E++ ++ PD P +SL+ + GK G ++ + VF+ M
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
+ +D+ ++N M++ + E + L + M E PD T+
Sbjct: 399 ----LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454
Query: 463 XXXXXXXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
E M +SP L ++ LV L ++GK+ A E +
Sbjct: 455 EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETM 500
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 236 DTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVME 295
D + N L+ A ++ V+ A + F + N S+N +++G+ +A++V +
Sbjct: 205 DAVSWNSLLSAYLEKGLVDEARAL---FDEMEERNVESWNFMISGYAAAGLVKEAKEVFD 261
Query: 296 DMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGC-PPNAVTYTIVMFALGKA 354
M V DV S+N+ + +Y H + +V +V +M ++ P+ T V+ A
Sbjct: 262 SMP----VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASL 317
Query: 355 GQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTY 414
G LSQ V+ + HGI + ++L+ + K G++ A +VF K RDV T+
Sbjct: 318 GSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSK----RDVSTW 373
Query: 415 NTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
N++IS H + AL + EM KP+ T+
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 304 PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEV 363
P+ F++NS I +Y + V EM P+ ++T V+ A + ++
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 364 YEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACA 423
+ G+V D ++L+ + G++G + A V + MP VRD V++N+++S
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP----VRDAVSWNSLLSAYLE 218
Query: 424 HSREETALRLLKEMEERSCK 443
+ A L EMEER+ +
Sbjct: 219 KGLVDEARALFDEMEERNVE 238
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 277 LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG 336
L++ + + D+A +V + DV ++NS I + ++ EM G
Sbjct: 345 LVDMYSKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFILGKAGRLKDA 395
PN +T+ V+ A G L QA +++E M S + + P Y ++ +LG+ G++++A
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 396 CDVFEDMP 403
++ ++P
Sbjct: 461 EELVNEIP 468
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 140/342 (40%), Gaps = 62/342 (18%)
Query: 155 TWAKTQTGYEHSPEL-----------------YNLMIDILGKSKNFDLVWELVEEMAKHE 197
TW +GY S +L +N MID +S D EL +EM +
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER- 169
Query: 198 GYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAH 257
+ + +++ L + G+ ++A+ F RM D + ++D L K V+ A
Sbjct: 170 ---NIVSWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEAR 222
Query: 258 GVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVP------------- 304
+ F + N S+N ++ G+ + D+A ++ + M E F
Sbjct: 223 RL---FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Query: 305 --------------DVFSYNSFIESYCHDKDFRKVDQVLEEMSENG-CPPNAVTYTIVMF 349
+V S+ + I Y +K+ + V +M +G PN TY ++
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV- 408
A L + ++++ + + S+L+ + K+G L A +F++ G+V
Sbjct: 340 ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN----GLVC 395
Query: 409 -RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
RD++++N+MI+ H + A+ + +M + KP TY
Sbjct: 396 QRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 146/344 (42%), Gaps = 46/344 (13%)
Query: 133 NSSVQQILKRFNNDWVPAFGFFTWAKTQTGYEHSPEL-----------------YNLMID 175
N V + + F D +P +W TGY + + +N MI
Sbjct: 215 NGKVDEARRLF--DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272
Query: 176 ILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFG--- 232
+++ + L + M + + + T ++ + ++E+A+ F +M G
Sbjct: 273 GFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 233 --VDMDTAALNMLMD--ALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFD 288
V + L+ D LV+G + L KS+ N + L+N + +
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQ-----LISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 289 QARKVMEDMKEHGFV--PDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTI 346
ARK M ++G V D+ S+NS I Y H ++ ++ +M ++G P+AVTY
Sbjct: 384 AARK----MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLN 439
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVP-DTPFYSSLIFILGKAGRLKDACDVFEDMPKQ 405
++FA AG + + +E ++ + +P Y+ L+ + G+AGRLKD + F +
Sbjct: 440 LLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTN-FINCDDA 498
Query: 406 GIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETY 449
+ R Y ++S H+ A ++K++ E + D TY
Sbjct: 499 RLSRSF--YGAILSACNVHNEVSIAKEVVKKVLE-TGSDDAGTY 539
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 335 NGCPP-NAVTYTIVMFALGKAGQLSQALEVYEKMKSH-GIVPDTPFYSSLIFILGKAGRL 392
+G P + VT+T V+ K G + +A E+++++ S +V T S + ++ +L
Sbjct: 70 DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYL----RSKQL 125
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPX 452
A +F++MP+ R+VV++NTMI R + AL L EM ER ++ +++
Sbjct: 126 SIAEMLFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSM 177
Query: 453 XXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGL 512
E M + D+ +++ +V GL K+GK+D A F+ + R +
Sbjct: 178 VKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 130/293 (44%), Gaps = 15/293 (5%)
Query: 218 HEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNIL 277
++D ++A RR + + D N ++ ++ ++ A + F + + S+N +
Sbjct: 72 NKDLVSA-RRYFDLSPERDIVLWNTMISGYIEMGNMLEARSL---FDQMPCRDVMSWNTV 127
Query: 278 MNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG- 336
+ G+ + + + +V +DM E +VFS+N I+ Y + +V + M + G
Sbjct: 128 LEGYANIGDMEACERVFDDMPER----NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 183
Query: 337 CPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP-DTPFYSSLIFILGKAGRLKDA 395
PN T T+V+ A K G V++ ++ G D ++LI + GK G ++ A
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXX 455
+VF+ + + RD++++NTMI+ AH AL L EM+ PD T+
Sbjct: 244 MEVFKGIKR----RDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCA 299
Query: 456 XXXXXXXXXXXXXXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
MF + + P++ +V L ++G L A F ++
Sbjct: 300 CKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKM 352
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 20/251 (7%)
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFG-VDMDTAALNMLMDALVKGNSVE----- 254
+++ +++ + G+ + + +F+RM + G V + A + +++ A K + +
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 255 HAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE 314
H +G L + + +N + I M G C + A +V + +K D+ S+N+ I
Sbjct: 211 HKYGETLGYNK-VDVNVKNALIDMYGKCGA--IEIAMEVFKGIKRR----DLISWNTMIN 263
Query: 315 SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM-KSHGIV 373
+ + EM +G P+ VT+ V+ A G + L + M I+
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIM 323
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR---EETA 430
P+ ++ +L +AG L A + MP + D V + T++ + + + E A
Sbjct: 324 PEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKA---DAVIWATLLGASKVYKKVDIGEVA 380
Query: 431 LRLLKEMEERS 441
L L ++E R+
Sbjct: 381 LEELIKLEPRN 391
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 22/300 (7%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLE----- 262
+L+ K H I FR+++ G+++D+A+ ++ +S H VLL
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVI------SSCSHIGAVLLGKSLHC 457
Query: 263 --FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
K+ + L N L++ + ++ + A ++ + +V ++N+ I SY H +
Sbjct: 458 YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-----TNVITWNAMIASYVHCE 512
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
K + + M P+++T ++ A G L + ++ + + +
Sbjct: 513 QSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSA 572
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
+LI + K G L+ + ++F+ G +D V +N MIS H E+A+ L +MEE
Sbjct: 573 ALIDMYAKCGHLEKSRELFD----AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 628
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
KP T+ M + D+ P+L +S LV L +SG L+ A
Sbjct: 629 DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEA 688
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 123/290 (42%), Gaps = 21/290 (7%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
+T + + + N +ID+ GK + + W + E + T ++ +
Sbjct: 460 VKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-----CEADTNVITWNAMIASYVHCEQS 514
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLEFKSLIPLNSGSFN 275
E AIA F RM + L L+ A V S+E H + E + + L+ +
Sbjct: 515 EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSA-- 572
Query: 276 ILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN 335
L++ + + + +++R++ + G D +N I Y D + ++M E+
Sbjct: 573 ALIDMYAKCGHLEKSRELFDA----GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 628
Query: 336 GCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDA 395
P T+ ++ A AG + Q +++ KM + + P+ YS L+ +L ++G L++A
Sbjct: 629 DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEA 688
Query: 396 CDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPD 445
MP D V + T++S+ H E +R M ER+ D
Sbjct: 689 ESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGIR----MAERAVASD 731
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 297 MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQ 356
MKE G + D +Y S I D ++ EEM +NGC P V+YT M L G+
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 357 LSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNT 416
+ +A EVY++M + P+ Y+ L+ L G+ ++A D+F M + G+ D N
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNI 267
Query: 417 MISTACAHSREETALRLLKEMEE 439
+I+ A R+L M+E
Sbjct: 268 LIAKALKFGETSFMTRVLVYMKE 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 135/353 (38%), Gaps = 82/353 (23%)
Query: 87 KPKLVT----PTFNENKHDYVEAISTLLKEHHSSPELVAQALDGHGFQVSNSSVQQILKR 142
KPKLV P + D V I +LK +S+ + + L G + + + ++LK
Sbjct: 41 KPKLVKTQTLPDPSVYTRDIVSNIYNILK--YSNWDSAQEQLPHLGVRWDSHIINRVLKA 98
Query: 143 ---FNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY 199
W+ FF WA G++H Y M+DI G+
Sbjct: 99 HPPMQKAWL----FFNWAAQIKGFKHDHFTYTTMLDIFGE-------------------- 134
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
AG+ + + F MKE GV +DT
Sbjct: 135 ---------------AGRIQSMYSVFHLMKEKGVLIDTVT-------------------- 159
Query: 260 LLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHD 319
+ SLI S S ++ D A ++ E+M+++G P V SY ++++ D
Sbjct: 160 ---YTSLIHWVSSSGDV-----------DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFAD 205
Query: 320 KDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFY 379
+ +V +EM + PN TYT++M L G+ +AL+++ KM+ G+ PD
Sbjct: 206 GRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAAC 265
Query: 380 SSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALR 432
+ LI K G V M + G+V + + T A + LR
Sbjct: 266 NILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLR 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 76/145 (52%)
Query: 301 GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
GF D F+Y + ++ + + + V M E G + VTYT ++ + +G + A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
+ ++E+M+ +G P Y++ + +L GR+++A +V+++M + + + TY ++
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 421 ACAHSREETALRLLKEMEERSCKPD 445
A + E AL + +M+E +PD
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPD 261
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 343 TYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM 402
TYT ++ G+AG++ V+ MK G++ DT Y+SLI + +G + A ++E+M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 403 PKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXX 462
G VV+Y + A R E A + KE
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKE-------------------------- 217
Query: 463 XXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQL 522
M ++ +SP+ T+++L+ L +GK + A F ++ G+ P A L
Sbjct: 218 ---------MLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNIL 268
Query: 523 V 523
+
Sbjct: 269 I 269
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 138/340 (40%), Gaps = 21/340 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
YN+M+ ++ NF+ + M + +T RR G+ E A F M
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR----GEMEKARELFYSMM 182
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSG-SFNILMNGWCRVRNFD 288
E + + N ++ ++ +E A F + P+ ++ ++ G+ + + +
Sbjct: 183 E----KNEVSWNAMISGYIECGDLEKAS----HFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A + +DM + ++ ++N+ I Y + ++ M E G PN+ + +
Sbjct: 235 LAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
+ L ++++ + + D +SLI + K G L DA +FE M K
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK---- 347
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+DVV +N MIS H + AL L +EM + +PD T+
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 469 XEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
E M ++ + P ++ +V L ++GKL+ A +
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 154/352 (43%), Gaps = 24/352 (6%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNS-VEHAHGVL 260
++ + K++ R ++G + A+ F M+ +T N L+ + K S + AH +
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRA----KNTITWNSLLIGISKDPSRMMEAHQL- 115
Query: 261 LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDK 320
F + ++ S+NI+++ + R NF++A+ + M D S+N+ I Y
Sbjct: 116 --FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMITGYARRG 169
Query: 321 DFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYS 380
+ K ++ M E N V++ ++ + G L +A ++ G+V ++
Sbjct: 170 EMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA----WT 221
Query: 381 SLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
++I KA +++ A +F+DM + +++VT+N MIS +SR E L+L + M E
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 441 SCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
+P+ + + K+ L D+ + L+ K G+L A
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 501 CSFFEELISRGLTPRHGALKQLVKDLEA-KSMLKEKEHIEKLMTPPSIRFTS 551
FE + + + + + + A K++ +E I+ + P I F +
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 299 EHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLS 358
++G D S+N I+S+C + EM ++G P+ VTYT ++ AL K +
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 359 QALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMI 418
++ M G P+ ++ I L R DA D+ MPK + D +TYN +I
Sbjct: 230 IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 419 STACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLS 478
+ A R+ M + KP+L+ Y + +
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 479 PDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSML 532
P+L T +L+ GL K G+LD A S EL+ R + P KQL L KS+L
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPPFRS--KQL---LSLKSIL 397
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 4/261 (1%)
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEM-SENGCPPNAVTYTIV 347
QA +M +G V S+N+ ++ + D + + L + S+ G +AV++ I
Sbjct: 124 QALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIA 183
Query: 348 MFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGI 407
+ + + G L A +M+ G+ PD Y++LI L K R ++ M +G
Sbjct: 184 IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGC 243
Query: 408 VRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXX 467
++ T+N I R A LL M + +PD TY+
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAER 303
Query: 468 XXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLE 527
M P+L + ++H L K+G D A + ++ + + P ++ L+K L
Sbjct: 304 VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLV 363
Query: 528 AKSMLKEKEHIEKLM---TPP 545
K L + + I +L+ PP
Sbjct: 364 KKGQLDQAKSIMELVHRRVPP 384
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 4/242 (1%)
Query: 162 GYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGY-VTLYTMTKVLRRLTKAGKHED 220
G + S + +N + +L + + +WE + + G + + ++ + G +
Sbjct: 136 GCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 221 AIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV--LLEFKSLIPLNSGSFNILM 278
A A R M++ G+ D L+ AL K +G+ L+ K P N +FN+ +
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKP-NLTTFNVRI 254
Query: 279 NGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCP 338
R A ++ M + PD +YN I+ + + ++V M G
Sbjct: 255 QFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYK 314
Query: 339 PNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDV 398
PN Y ++ L KAG A + + P+ L+ L K G+L A +
Sbjct: 315 PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSI 374
Query: 399 FE 400
E
Sbjct: 375 ME 376
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 7/266 (2%)
Query: 124 LDGHGFQVSNSSVQQILK--RFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSK 181
+D +G + S S L+ FN D + F A ++ G + +N+ I +
Sbjct: 132 MDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELG 191
Query: 182 NFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALN 241
D + + EM K + T T ++ L K + + M G + N
Sbjct: 192 ILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFN 251
Query: 242 MLMDALVKGNSVEHAHGVLLEFKSL-IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEH 300
+ + LV A+ +LL L + +S ++N+++ G+ R D A +V M
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGK 311
Query: 301 GFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQA 360
G+ P++ Y + I C +F + ++ PN T +++ L K GQL QA
Sbjct: 312 GYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQA 371
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFIL 386
+ E + H VP PF S + L
Sbjct: 372 KSIMELV--HRRVP--PFRSKQLLSL 393
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 120/292 (41%), Gaps = 54/292 (18%)
Query: 250 GNSVEHAHGVLLE--FKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
G+ HG ++ F S + + +G ++ + + N + ARKV ++M E DV
Sbjct: 148 GSLARQVHGFVIRGGFDSDVFVGNG----MITYYTKCDNIESARKVFDEMSER----DVV 199
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEM-SENGCPPNAVTYTIVMFALGKAGQLSQALEVYEK 366
S+NS I Y F ++ + M + + PN VT V A G++ L LEV++K
Sbjct: 200 SWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 367 MKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSR 426
M + I D +++I K G L A +F++M + +D VTY +IS AH
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE----KDSVTYGAIISGYMAHGL 315
Query: 427 EETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSL 486
+ A+ L EME S L T++
Sbjct: 316 VKEAMALFSEME---------------------------------------SIGLSTWNA 336
Query: 487 LVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSMLKEKEHI 538
++ GL ++ + + F E+I G P L L+ L S LK + I
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI 388
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 200 VTLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGV 259
+ L T ++ L + HE+ I +FR M G +T L+ L+ +L ++++
Sbjct: 329 IGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK-- 386
Query: 260 LLEFKSLIPLNSGSFNI-----LMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIE 314
E + N NI +++ + ++ A++V ++ K+ + ++ + I
Sbjct: 387 --EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLI----AWTAIIT 440
Query: 315 SYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS-HGIV 373
+Y D + ++M G P+ VT T V+ A +G A +++ M + + I
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
Query: 374 PDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR 409
P Y+ ++ +L +AG+L DA + MP I +
Sbjct: 501 PGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK 536
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 131/327 (40%), Gaps = 18/327 (5%)
Query: 208 VLRRLTKAGKHEDAIAAF---RRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFK 264
V+ G+ D I ++M E + MD + N ++ K S+++A + F
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARAL---FD 293
Query: 265 SLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRK 324
+ +S ++ +++G+ +A + +M+ G ++N+ I + +
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEE 349
Query: 325 VDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIF 384
V EM G PN VT + ++ +L + L E++ +G + +S+I
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 385 ILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKP 444
K G L A VF++ R ++ + +I+ H ++A L +M+ KP
Sbjct: 410 NYAKLGFLLGAQRVFDNCKD----RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKP 465
Query: 445 DLETYHPXXXXXXXXXXXXXXXXXXEHMF-KNDLSPDLGTFSLLVHGLRKSGKLDHACSF 503
D T + M K D+ P + ++ +V L ++GKL A F
Sbjct: 466 DDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF 525
Query: 504 FEELISRGLTPRHGAL---KQLVKDLE 527
++ + GAL ++ DLE
Sbjct: 526 ISKMPIDPIAKVWGALLNGASVLGDLE 552
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 208 VLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLI 267
+++ K G A F +MK D DT + N ++D V + +E A + F +
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFAL---FSEMP 339
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
++ S+N++++G+ V N + AR E E V S+NS I +Y +KD+++
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV----SWNSIIAAYEKNKDYKEAVD 395
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILG 387
+ M+ G P+ T T ++ A L +++++ + ++PD P +++LI +
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQ-IVVKTVIPDVPVHNALITMYS 454
Query: 388 KAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLE 447
+ G + ++ +F++M + R+V+T+N MI H AL L M+ P
Sbjct: 455 RCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 448 TY 449
T+
Sbjct: 512 TF 513
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 16/239 (6%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEM-AKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
+N+M+ N +L E+ KH + ++ K +++A+ F RM
Sbjct: 346 WNMMVSGYASVGNVELARHYFEKTPEKHT-----VSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 229 KEFGVDMDTAALNMLMDA---LVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVR 285
G D L L+ A LV H +++ K++IP + N L+ + R
Sbjct: 401 NIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV--KTVIP-DVPVHNALITMYSRCG 457
Query: 286 NFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYT 345
++R++ ++MK +V ++N+ I Y + + + M NG P+ +T+
Sbjct: 458 EIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFV 514
Query: 346 IVMFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
V+ A AG + +A + M S + I P YSSL+ + G+ ++A + MP
Sbjct: 515 SVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP 573
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 119/298 (39%), Gaps = 38/298 (12%)
Query: 237 TAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMED 296
T ++M+ L + G+L E+ L+ N + L+N R N KV E
Sbjct: 315 TGKCKLVMEKLESLQEGDDPSGLLAEWAELLEPNRVDWIALINQ-LREGNTHAYLKVAEG 373
Query: 297 -MKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAG 355
+ E F + Y+ I + + V+++L++MS+NG P+ +T T ++ K+G
Sbjct: 374 VLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSG 433
Query: 356 QLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYN 415
+A E +E +KS+G+ PD Y ++I AG+ PK G
Sbjct: 434 NFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK-----------PKLG--------- 473
Query: 416 TMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHM-FK 474
RL+KEM+ + K E Y M +
Sbjct: 474 ---------------ERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYA 518
Query: 475 NDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRGLTPRHGALKQLVKDLEAKSML 532
+D +SL V K+G++D A S F+E+ G P + LV+ + ++ L
Sbjct: 519 SDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSL 576
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/312 (17%), Positives = 125/312 (40%), Gaps = 37/312 (11%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
Y+ +I I K + + V ++++M+++ + + T T ++ +K+G E A AF +K
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 230 EFGV----------------------------DMDTAALNM-------LMDALVKGNSVE 254
+G+ +M L L+ A +
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDAN 506
Query: 255 HAHGVL--LEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSF 312
A G+ +++ S PL+ ++++ + + + D+A+ ++M++ G PD +
Sbjct: 507 GAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANL 566
Query: 313 IESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGI 372
+ +Y + K ++L ++ ++G +TYT+++ + G + +A ++ K+ G
Sbjct: 567 VRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGE 626
Query: 373 VPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALR 432
P SL + K + + ++ +IS E+ A R
Sbjct: 627 APPFELQVSLCCMYSGVRNEKKTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEKDARR 686
Query: 433 LLKEMEERSCKP 444
+ K ME R P
Sbjct: 687 MYKYMEARKFLP 698
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 243 LMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHG 301
L A + + + +L E +S +P N ++ + R D+ ++++MKE
Sbjct: 148 LARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWE 207
Query: 302 FVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSEN-GCPPNAVTYTIVMFALGKAGQLSQA 360
PDV +YNS ++ ++ VL M E+ N +TY V+ + KA +
Sbjct: 208 CKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMC 267
Query: 361 LEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMIST 420
L +Y +M GI PD Y+++I LG++G +K++ +F++M ++ I V Y +I
Sbjct: 268 LVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDC 327
Query: 421 ACAHSREETALRLLKEMEERS 441
++AL+L E++ S
Sbjct: 328 LKKSGDFQSALQLSDELKNTS 348
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 309 YNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMK 368
Y + ++ + D + +L+E+SE+ P + ++FA + Q+ + L + ++MK
Sbjct: 145 YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMK 204
Query: 369 SHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVR-DVVTYNTMISTACAHSRE 427
PD Y+S++ ILG+AG + + V M + V +++TYNT+++ R
Sbjct: 205 EWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRF 264
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLL 487
+ L + EM + +PDL +Y + M + + P + + L
Sbjct: 265 DMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRAL 324
Query: 488 VHGLRKSGKLDHACSFFEEL 507
+ L+KSG A +EL
Sbjct: 325 IDCLKKSGDFQSALQLSDEL 344
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 4/249 (1%)
Query: 206 TKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKS 265
T ++ + T+ G A + ++E + + + L+ A + N ++ + V E
Sbjct: 74 TNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLI 133
Query: 266 L---IPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDF 322
L PL+S + L + + +++++ E + N I ++ +
Sbjct: 134 LPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQI 193
Query: 323 RKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVP-DTPFYSS 381
KV +L+EM E C P+ +TY V+ LG+AG +++ L V MK V + Y++
Sbjct: 194 DKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNT 253
Query: 382 LIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERS 441
++ + KA R ++ +M + GI D+++Y +I + + +LRL EM++R
Sbjct: 254 VLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQ 313
Query: 442 CKPDLETYH 450
+P + Y
Sbjct: 314 IRPSVYVYR 322
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 152/378 (40%), Gaps = 37/378 (9%)
Query: 141 KRFNNDWVPAFGFFTWAKTQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYV 200
K FN +P F+W G+ S E L+ L D E VE
Sbjct: 80 KIFNQ--MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD---EFVEP-------- 126
Query: 201 TLYTMTKVLRRLTKAGKHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHAHGVL 260
+T VL+ K GK ++ ++G D ++ L+ V ++ A +
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDAR--V 184
Query: 261 LEFKSLIPLN----------SGS---FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVF 307
L +K++I + G +N++++G+ R+ + AR + + M++ V
Sbjct: 185 LFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV---- 240
Query: 308 SYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKM 367
S+N+ I Y + F+ +V EM + PN VT V+ A+ + G L ++
Sbjct: 241 SWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA 300
Query: 368 KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSRE 427
+ GI D S+LI + K G ++ A VFE +P++ +V+T++ MI+ H +
Sbjct: 301 EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE----NVITWSAMINGFAIHGQA 356
Query: 428 ETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEHMFKND-LSPDLGTFSL 486
A+ +M + +P Y M D L P + +
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416
Query: 487 LVHGLRKSGKLDHACSFF 504
+V L +SG LD A F
Sbjct: 417 MVDLLGRSGLLDEAEEFI 434
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 10/222 (4%)
Query: 288 DQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENG-CPPNAVTYTI 346
D AR V + DV S+N+ I Y + + ++ M E G N T+
Sbjct: 401 DSARAVFNWLPN----TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 347 VMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
V+ A +AG L Q ++++ ++ +G+ D +SL + GK GRL+DA +F +P+
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV- 515
Query: 407 IVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXX 466
+ V +NT+I+ H E A+ L KEM + KPD T+
Sbjct: 516 ---NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 467 XXXEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
E M + ++P L + +V ++G+L+ A F + +
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 202 LYTMTKVLRRLTKAGKHEDAIAAFRR-MKEFGVDMDTAALNMLMDA---LVKGNSVEHAH 257
+Y ++ +AG + I F M G+ D ++ A ++ GN + H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKI---H 173
Query: 258 GVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYC 317
+ L+F + + + L++ + R + AR + ++M V D+ S+N+ I YC
Sbjct: 174 CLALKFGFMWDVYVAAS--LIHLYSRYKAVGNARILFDEMP----VRDMGSWNAMISGYC 227
Query: 318 HDKDFRKVDQVLEEMSENGCPP-NAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDT 376
+ ++ + NG ++VT ++ A +AG ++ + ++ HG+ +
Sbjct: 228 QSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 377 PFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKE 436
+ LI + + GRL+D VF+ M VRD++++N++I + + A+ L +E
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 437 MEERSCKPDLET 448
M +PD T
Sbjct: 339 MRLSRIQPDCLT 350
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 29/246 (11%)
Query: 217 KHEDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLEFKSLIPLNSGS 273
+ EDA+ F +M+E GV + + ++ A +++ HG+ + SGS
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLA------VKTGSGS 295
Query: 274 ----FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSF--IESYCHDKDFRKVDQ 327
N L++ + + + ++A + E M E D+F++NS + YC D D
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDER----DLFTWNSVLCVHDYCGDHD--GTLA 349
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIV----PDTPFYSSLI 383
+ E M +G P+ VT T V+ G+ L Q E++ M G++ + ++SL+
Sbjct: 350 LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 384 FILGKAGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCK 443
+ K G L+DA VF+ M V+D ++N MI+ S E AL + M K
Sbjct: 410 DMYVKCGDLRDARMVFDSMR----VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVK 465
Query: 444 PDLETY 449
PD T+
Sbjct: 466 PDEITF 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 20/293 (6%)
Query: 159 TQTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKH 218
+TG + N +ID+ GKSK + + E M + + L+T VL G H
Sbjct: 289 VKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD----LFTWNSVLCVHDYCGDH 344
Query: 219 EDAIAAFRRMKEFGVDMDTAALNMLMDALVKGNSVEHA---HGVLLEFKSLIPLNSGSF- 274
+ +A F RM G+ D L ++ + S+ HG ++ L +S F
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 275 -NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
N LM+ + + + AR V + M+ V D S+N I Y + M
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDSMR----VKDSASWNIMINGYGVQSCGELALDMFSCMC 460
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFILGKAGRL 392
G P+ +T+ ++ A +G L++ +M++ + I+P + Y+ +I +LG+A +L
Sbjct: 461 RAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKL 520
Query: 393 KDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETAL---RLLKEMEERSC 442
++A +E + I + V + +++S+ H ++ AL + L E+E C
Sbjct: 521 EEA---YELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHC 570
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 220 DAIAAFRRMKEFGVDMDTAALNMLM---DALVKGNSVEHAHGVL--LEFKSLIPLNSGSF 274
DA+ +R M+ G+ D L+ DA+ + + V+ HG+ L F S + SG
Sbjct: 144 DAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSG-- 200
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSE 334
L+ + + + + A+KV +++ + D +N+ + Y F V +M E
Sbjct: 201 --LVTSYSKFMSVEDAQKVFDELPDR---DDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 335 NGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKD 394
G + T T V+ A +G + ++ G D ++LI + GK+ L++
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 395 ACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLET 448
A +FE M + RD+ T+N+++ + L L + M +PD+ T
Sbjct: 316 ANSIFEAMDE----RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 138/340 (40%), Gaps = 12/340 (3%)
Query: 169 LYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRM 228
L+NLMI S + L + M YT +L+ + E+ ++
Sbjct: 82 LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQI 141
Query: 229 KEFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFD 288
+ G + D A+N L+++ + + AH L F + + S+N ++ G+ + D
Sbjct: 142 TKLGYENDVYAVNSLINSYAVTGNFKLAH---LLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
A + M E + S+ + I Y ++ Q+ EM + P+ V+ +
Sbjct: 199 IALTLFRKMAE----KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 349 FALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIV 408
A + G L Q ++ + I D+ LI + K G +++A +VF+++ K
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK---- 310
Query: 409 RDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXX 468
+ V + +IS H A+ EM++ KP++ T+
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 469 XEHMFKN-DLSPDLGTFSLLVHGLRKSGKLDHACSFFEEL 507
M ++ +L P + + +V L ++G LD A F +E+
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
Query: 170 YNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHEDAIAAFRRMK 229
+N +I K+ D+ L +MA+ + T ++ +A +++A+ F M+
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAI----SWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 230 EFGVDMDTAALNMLMDALVKGNSVEHAHGVLLEF-KSLIPLNSGSFNILMNGWCRVRNFD 288
V+ D +L + A + ++E + K+ I ++S +L++ + + +
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 289 QARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVM 348
+A +V +++K+ V ++ + I Y + R+ EM + G PN +T+T V+
Sbjct: 300 EALEVFKNIKK----KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 349 FALGKAGQLSQALEVYEKM-KSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMP 403
A G + + ++ M + + + P Y ++ +LG+AG L +A ++MP
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP 411
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 275 NILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS- 333
N L+ + R R+ ARKV ++M V DV S+NS IESY + ++ M+
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMS----VWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLK 393
E GC P+ +T V+ G S +++ + ++ + + L+ + K G +
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 394 DACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXX 453
+A VF +M V+DVV++N M++ R E A+RL ++M+E K D+ T+
Sbjct: 282 EANTVFSNMS----VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 454 XXXXXXXXXXXXXXXXEHMFKNDLSPDLGTFSLLVHGLRKSGKLDHA 500
M + + P+ T ++ G G L H
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 132/327 (40%), Gaps = 54/327 (16%)
Query: 161 TGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHED 220
TG+ + + N ++ + + ++ ++ +EM+ + + + ++ K GK +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD----VVSWNSIIESYAKLGKPKV 211
Query: 221 AIAAFRRM-KEFGVDMDTAAL-----------------------------------NMLM 244
A+ F RM EFG D L N L+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 245 DALVKGNSVEHAHGVLLEFKSLIPLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVP 304
D K ++ A+ V F ++ + S+N ++ G+ ++ F+ A ++ E M+E
Sbjct: 272 DMYAKCGMMDEANTV---FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 305 DVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVY 364
DV ++++ I Y + V +M +G PN VT V+ G L E++
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 365 E-------KMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDM-PKQGIVRDVVTYNT 416
++ +G + + LI + K ++ A +F+ + PK+ RDVVT+
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE---RDVVTWTV 445
Query: 417 MISTACAHSREETALRLLKEMEERSCK 443
MI H AL LL EM E C+
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQ 472
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 160 QTGYEHSPELYNLMIDILGKSKNFDLVWELVEEMAKHEGYVTLYTMTKVLRRLTKAGKHE 219
+ G+ + N +ID+ K K D + + ++ E V +T+ + +H
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM-----IGGYSQHG 454
Query: 220 DAIAAFRRMKE------------FGVDMDTAALNMLMDALVKGNSVEHAHGVLLEFKSLI 267
DA A + E F + A L AL G + HA+ L ++ +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLA-ALRIGKQI-HAYA-LRNQQNAV 511
Query: 268 PLNSGSFNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQ 327
PL N L++ + + + AR V ++M + ++ S + Y +
Sbjct: 512 PLFVS--NCLIDMYAKCGSISDARLVFDNM----MAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 328 VLEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKS-HGIVPDTPFYSSLIFIL 386
+ +EM G + VT +V++A +G + Q +E + +MK+ G+ P Y+ L+ +L
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 387 GKAGRLKDACDVFEDMPKQ 405
G+AGRL A + E+MP +
Sbjct: 626 GRAGRLNAALRLIEEMPME 644
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%)
Query: 274 FNILMNGWCRVRNFDQARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMS 333
+ L++G+ D+A+++ +M G +P+VF+YNS I C +FR+ +L+EM
Sbjct: 727 YTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 786
Query: 334 ENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHG 371
GC PN V Y+ ++ L KAG+LS+A +V ++M G
Sbjct: 787 SRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 290 ARKVMEDMKEHGFVPDVFSYNSFIESYCHDKDFRKVDQVLEEMSENGCPPNAVTYTIVMF 349
A + MKE G P V Y + I+ Y + K ++ EM+ G PN TY ++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 350 ALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQG 406
L AG+ +A + ++M+S G P+ YS+L+ L KAG+L +A V ++M K+G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 35/160 (21%)
Query: 352 GKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGKAGRLKDACDVFEDMPKQGIVRDV 411
GK + AL MK GI P Y++LI +G L A ++F +M +G + +V
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 412 VTYNTMISTACAHSREETALRLLKEMEERSCKPDLETYHPXXXXXXXXXXXXXXXXXXEH 471
TYN+MI C A LLKEME R C P+ Y
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVY---------------------- 797
Query: 472 MFKNDLSPDLGTFSLLVHGLRKSGKLDHACSFFEELISRG 511
S LV LRK+GKL A +E++ +G
Sbjct: 798 -------------STLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%)
Query: 329 LEEMSENGCPPNAVTYTIVMFALGKAGQLSQALEVYEKMKSHGIVPDTPFYSSLIFILGK 388
L M E G P+ + YT ++ +G+L +A E++ +M G +P+ Y+S+I L
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 389 AGRLKDACDVFEDMPKQGIVRDVVTYNTMISTACAHSREETALRLLKEMEER 440
AG ++AC + ++M +G + V Y+T++ + A +++KEM ++
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823