Miyakogusa Predicted Gene
- Lj1g3v0112890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0112890.1 Non Chatacterized Hit- tr|I1LDZ6|I1LDZ6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.09,0,BEIGE/BEACH-RELATED,NULL; BEACH domain,BEACH domain;
Protein kinase-like (PK-like),Protein kinase-li,CUFF.25262.1
(1093 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18525.1 | Symbols: | protein serine/threonine kinases;prote... 1159 0.0
AT2G45540.1 | Symbols: | WD-40 repeat family protein / beige-re... 115 2e-25
AT2G45540.2 | Symbols: | WD-40 repeat family protein / beige-re... 115 2e-25
AT4G02660.1 | Symbols: | Beige/BEACH domain ;WD domain, G-beta ... 107 4e-23
AT1G58230.1 | Symbols: | binding | chr1:21566331-21578865 FORWA... 104 3e-22
AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-be... 103 5e-22
AT3G60920.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Beige/BEAC... 59 3e-08
>AT5G18525.1 | Symbols: | protein serine/threonine kinases;protein
tyrosine kinases;ATP binding;protein kinases |
chr5:6146932-6153658 REVERSE LENGTH=1639
Length = 1639
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/1089 (54%), Positives = 769/1089 (70%), Gaps = 46/1089 (4%)
Query: 2 EEQNHCFDCLQRRINSDFSDQLVFNYAISTSAFPFGSSAIVQVSGTE-----------AS 50
E+ + CFDCL +RINSDFSDQ+VF+Y +S S PFGSSA+V+VS + ++
Sbjct: 4 EDSDLCFDCLDQRINSDFSDQIVFSYGVSDSPLPFGSSAVVKVSDSSEEFSASCSSCEST 63
Query: 51 GSQFILQYMPGHDKNCFVNYVNEYILDSSSESTRSNDHDIGGNQYNDEINGGIAISVASE 110
SQFIL+Y+ + C YV+++++ SND + ++ D G + +
Sbjct: 64 SSQFILEYLRKDEHGCLAKYVDKFVV--KDREGNSND-AVESDECLDCSTSGSQATEDDD 120
Query: 111 TGNATSGNTSCNHSGRFSCSRTITSLAPIARVGMSSYSTFQEVAADFLSGLSEDHVLESL 170
T N T G+ +C HSG FSC RT+ +L PIA++ S S Q++A+ F ED +L SL
Sbjct: 121 TENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASSFHYECPEDQILASL 180
Query: 171 DLFIAGKASGRDCVNFLRLLGLPSF-EKDTFPGSLRHPNIAPVLGILKTSDYINMMLPKT 229
I GK+SG+ +FL LL E+ + LRHPN++PVLG+L +SD + +LPK
Sbjct: 181 HRLIDGKSSGQATHSFLCLLLGLPLLEEKSKLRCLRHPNLSPVLGLLTSSDCLVSVLPKA 240
Query: 230 PYNLESILHFNPGALKSDWNRRFXXXXXXXXXXXXXXXGVSHGNICPSNILLTDSLWSWL 289
PY LE+IL+++P A+KS+W+R F VSHG+I PSNILL+DSLWSWL
Sbjct: 241 PYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLHGLKVSHGDIRPSNILLSDSLWSWL 300
Query: 290 RLWNEPVLESSLTSQKSERVDSKPAKTGCCNGGCHSNDLYADLKLSPSIDWNCSFHQWWR 349
++++P L S +S ++ C GC+S LYADLK+S +DW F +WW+
Sbjct: 301 TIYSKPDL-------GSVDANSSASRRRWCVEGCYSYGLYADLKISSHLDWQTHFDKWWK 353
Query: 350 GELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDAGWRDLNKSKWRLAKG 409
GELSNFEYLL+LN+LAGRRWGDHTFHPVMPWVIDFS KP+++ D+GWRDL KSKWRLAKG
Sbjct: 354 GELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVIDFSKKPENDSDSGWRDLRKSKWRLAKG 413
Query: 410 DEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRL 469
DEQLDFTYST E PHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPS MQRL
Sbjct: 414 DEQLDFTYSTFEFPHHVSDECLSELAVCSYKARRLPLSVLRKAVRSVYEPNEYPSDMQRL 473
Query: 470 YQWTPDECIPEFYCDALIFRSIHDGMADLAVPSWAESPEDFIKLHRDALESDRVSFQLHH 529
Y WTPDECIPEFYCD IF S+H M+DLAVP WA SP++FI+LHRDALES VS +HH
Sbjct: 474 YDWTPDECIPEFYCDPRIFCSLHPSMSDLAVPPWASSPDEFIRLHRDALESPHVSSLIHH 533
Query: 530 WIDIIFGYKMSGHAAVIAKNVMLPLSEPTMPRSTGRRQLFTQPHPIRHATSRITRHGSNK 589
WIDI FGYKMSGHAA+ AKNVML SEPT+PRS GRRQLF +PHP+R SR N+
Sbjct: 534 WIDITFGYKMSGHAAITAKNVMLSSSEPTVPRSVGRRQLFFRPHPVRLGFSREKEQSRNE 593
Query: 590 YAKVWSEAHEMQ------RETSLLSETAYLQELEQASAFSEHARHLNACYRYPLNHIKGK 643
E H + + +L YL+E E+ASAFS+HA HL C +Y H++
Sbjct: 594 L-----EMHTFHGFGVDNKRSVILLADEYLEETEEASAFSDHATHL--CPKY---HLREN 643
Query: 644 NISSLGDPAPETFSKNISELSL----VNRNYWVPYKMNLISFLQHMKEEDEGSSGYPDFL 699
+ S P ++S+N +++ ++N + +++L L+HM+ DE S+ + L
Sbjct: 644 LVES---PLHVSYSENTKKVNTSLPGTSKNKGLSSRISLNYLLEHMEVRDEASTELQELL 700
Query: 700 LWRQKLSSSRLDSEDVARDIFSVGCLLAELHLCRPLFDSISLAMYLEDGALPGFLQELPP 759
WRQ + + S+D+A DIFS+GC+LAEL+L +PLF+S+SLA YLE G LP ++ELPP
Sbjct: 701 QWRQDFCTGNI-SKDIAGDIFSIGCVLAELYLMKPLFNSVSLATYLEGGDLPELIKELPP 759
Query: 760 HVRLLVEACIQKDWTRRPSAKILLESPYFPKTVKSSYLFLAPLQLVSKDETRLRYAANLA 819
+++VEACI++DW RRPSAK LL+SPYF TV+S++LF APLQL++K +TRL YAA+ A
Sbjct: 760 PTQVIVEACIEQDWRRRPSAKSLLDSPYFSATVRSAHLFAAPLQLLAKGQTRLCYAASFA 819
Query: 820 KQGALREMGAFATEMCATYCLPLIVTAVNDTEAEWAYILLEELMKCLTAQAVKTLILPTV 879
KQG L+ MG F EMCA YCLPL+ T +++ E E AY+LL+E K LT AV+ L+LP++
Sbjct: 820 KQGVLKVMGTFVAEMCAVYCLPLVTTPLSEDECELAYVLLKEFTKSLTPMAVQRLVLPSI 879
Query: 880 QKILQTAGCLHLKVSLLQDSFVREIWNRVGKQAYLATVHPLVLSNLYIYPDKSSAASASV 939
QKIL T G HLKVSLLQDSFVRE+WN++GK+ YL +HPLV+SNLY PDK SA++ASV
Sbjct: 880 QKILLTTGYSHLKVSLLQDSFVRELWNQIGKRVYLEMIHPLVISNLYNSPDKISASAASV 939
Query: 940 LLIGSSEEIGVPITIHQTILPLVHCFGKGLCSDGLDVLVRIGGIFGESFIVKQMLPLLKN 999
LLIGSSEE+G P+T+HQTILPL+ FGKG+C+DG+DVLVRIG + G +FIVKQMLPLL++
Sbjct: 940 LLIGSSEELGAPVTVHQTILPLISYFGKGICTDGIDVLVRIGRLLGVNFIVKQMLPLLEH 999
Query: 1000 VVRSFTDVSCMNKPDPVQSWSALALIDCMITLDGLAAFLTEEVIVKELLADVSCIHIGIL 1059
VV D+S M KP+PV SW +LAL DC+ITLDGL A +++E+++ EL C+H+ +L
Sbjct: 1000 VVCFCIDLSSMKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHVRVL 1059
Query: 1060 MQKHMEIAV 1068
MQK++E+ V
Sbjct: 1060 MQKNLELRV 1068
>AT2G45540.1 | Symbols: | WD-40 repeat family protein / beige-related
| chr2:18757881-18772229 REVERSE LENGTH=2946
Length = 2946
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 135/282 (47%), Gaps = 53/282 (18%)
Query: 344 FHQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVI-DFSSKPDDNCD-AGWRDLNK 401
+W R E+SNFEYL+ LN LAGR + D T +PV PW+I D SS+ D + + +RDL+K
Sbjct: 2232 MERWARWEISNFEYLMQLNTLAGRSYNDITQYPVFPWIISDNSSESLDLSNPSTFRDLSK 2291
Query: 402 -----SKWRLAKGDEQLDFTYSTSEIP----HHVSDECLSELAVCSYKARRLPLSVLRMA 452
+ RL K E+ YS+ E P H S AV Y AR P + L +
Sbjct: 2292 PIGALNPERLKKFQER----YSSFEDPVIPKFHYGSHYSSAGAVLYYLARVEPFTTLSIQ 2347
Query: 453 VRSVYEP------NEYPSTMQRLYQWTPD--ECIPE-FYCDALIFR--SIHDGMADLA-- 499
++ +++P T + + D E +PE FY ++ SI G L
Sbjct: 2348 LQGGKFDHADRMFSDFPGTWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQLGEK 2407
Query: 500 -----VPSWAESPEDFIKLHRDALESDRVSFQLHHWIDIIFGYKMSGHAAVIAKNVML-- 552
+P WA++P DF+ R ALES+ VS LH WID+IFGYK G A++A NV
Sbjct: 2408 LDAVKLPPWAKNPVDFVHKQRRALESEHVSAHLHEWIDLIFGYKQRGKEAIMANNVFFYI 2467
Query: 553 ---------PLSEPTMPRSTGRR---------QLFTQPHPIR 576
+++P R+T + QL T PH R
Sbjct: 2468 TYEGTVDIDKITDPVQQRATQDQIAYFGQTPSQLLTVPHMKR 2509
>AT2G45540.2 | Symbols: | WD-40 repeat family protein / beige-related
| chr2:18757881-18772229 REVERSE LENGTH=3001
Length = 3001
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 135/282 (47%), Gaps = 53/282 (18%)
Query: 344 FHQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVI-DFSSKPDDNCD-AGWRDLNK 401
+W R E+SNFEYL+ LN LAGR + D T +PV PW+I D SS+ D + + +RDL+K
Sbjct: 2287 MERWARWEISNFEYLMQLNTLAGRSYNDITQYPVFPWIISDNSSESLDLSNPSTFRDLSK 2346
Query: 402 -----SKWRLAKGDEQLDFTYSTSEIP----HHVSDECLSELAVCSYKARRLPLSVLRMA 452
+ RL K E+ YS+ E P H S AV Y AR P + L +
Sbjct: 2347 PIGALNPERLKKFQER----YSSFEDPVIPKFHYGSHYSSAGAVLYYLARVEPFTTLSIQ 2402
Query: 453 VRSVYEP------NEYPSTMQRLYQWTPD--ECIPE-FYCDALIFR--SIHDGMADLA-- 499
++ +++P T + + D E +PE FY ++ SI G L
Sbjct: 2403 LQGGKFDHADRMFSDFPGTWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQLGEK 2462
Query: 500 -----VPSWAESPEDFIKLHRDALESDRVSFQLHHWIDIIFGYKMSGHAAVIAKNVML-- 552
+P WA++P DF+ R ALES+ VS LH WID+IFGYK G A++A NV
Sbjct: 2463 LDAVKLPPWAKNPVDFVHKQRRALESEHVSAHLHEWIDLIFGYKQRGKEAIMANNVFFYI 2522
Query: 553 ---------PLSEPTMPRSTGRR---------QLFTQPHPIR 576
+++P R+T + QL T PH R
Sbjct: 2523 TYEGTVDIDKITDPVQQRATQDQIAYFGQTPSQLLTVPHMKR 2564
>AT4G02660.1 | Symbols: | Beige/BEACH domain ;WD domain, G-beta
repeat protein | chr4:1159927-1173791 REVERSE LENGTH=3527
Length = 3527
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 131/290 (45%), Gaps = 52/290 (17%)
Query: 346 QWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVI-DFSSKPDDNCDAG-WRDLNKSK 403
+W GE+SNF+YL+ LN LAGR + D T +PV PW++ D+ + D D +R L+K
Sbjct: 2910 RWQNGEISNFQYLMHLNTLAGRGYSDLTQYPVFPWILADYDGESLDLSDPNNFRKLDKPM 2969
Query: 404 W-RLAKGDEQLDFTYST---SEIPH-HVSDECLSELAVCSYKARRLPLSVLRMAVR---- 454
+ +G+E+ Y + E+P H S V Y R P S ++
Sbjct: 2970 GCQTPEGEEEFRKRYESWDDPEVPQFHYGSHYSSAGIVLFYLIRLPPFSAENQKLQGGQF 3029
Query: 455 --------SVYEPNEYPSTMQRLYQWTPDECIPEFYCDALIF----------RSIHDGMA 496
S+ E + S + E IPEF+ + D +
Sbjct: 3030 DHADRLFNSIRET--WLSAAGKGNTSDVKELIPEFFYMPEFLENRFNLDLGEKQSGDKVG 3087
Query: 497 DLAVPSWAE-SPEDFIKLHRDALESDRVSFQLHHWIDIIFGYKMSGHAAVIAKNVML--- 552
D+ +P WA S +FI+ HR+ALESD VS LHHWID+IFG+K G AA A NV
Sbjct: 3088 DVILPPWARGSVREFIRKHREALESDYVSENLHHWIDLIFGHKQRGKAAENAVNVFYHYT 3147
Query: 553 --------PLSEPTMPRST-------GR--RQLFTQPHPIRHATSRITRH 585
+++P M S G+ +QLF +PH R ++ H
Sbjct: 3148 YEGNVDVDAVTDPAMKASILAQINHFGQTPKQLFQKPHVKRRTDRKVPPH 3197
>AT1G58230.1 | Symbols: | binding | chr1:21566331-21578865 FORWARD
LENGTH=2604
Length = 2604
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 30/238 (12%)
Query: 346 QWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVI-DFSSKPDDNCDAG-WRDLNKS- 402
+W R E++NFEYL+ILN LAGR + D T +PV PWV+ D+SS+ D A +RDL+K
Sbjct: 1950 RWRRREITNFEYLMILNTLAGRSYNDLTQYPVFPWVVADYSSETLDFSKASTFRDLSKPV 2009
Query: 403 ---KWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRL-PLSVLRMAVRS--- 455
R + E ++S +IP S + Y RL P + L +++
Sbjct: 2010 GALDTRRFEIFEDRYHSFSDPDIPSFYYGSHYSSMGSVLYYLLRLEPFTSLHRSLQGGKF 2069
Query: 456 -----VYEPNEYPSTMQRLYQWTPD--ECIPEF-YCDALIFRS-------IHDG--MADL 498
+++ E + + T D E IPEF Y + S DG + ++
Sbjct: 2070 DHADRLFQSVE--GSFRNCLSNTSDVKELIPEFFYMPEFLVNSNSYHLGVKQDGEPLGEV 2127
Query: 499 AVPSWAE-SPEDFIKLHRDALESDRVSFQLHHWIDIIFGYKMSGHAAVIAKNVMLPLS 555
+P WA+ SPE FI +R+ALES+ VS LH WID+IFG+K G AV A N+ L+
Sbjct: 2128 CLPPWAKGSPEMFIARNREALESEYVSSHLHDWIDLIFGHKQRGKPAVEAANIFYYLT 2185
>AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-beta
repeat protein | chr1:712971-726891 REVERSE LENGTH=3601
Length = 3601
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 131/293 (44%), Gaps = 58/293 (19%)
Query: 346 QWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVI-DFSSKPDDNCD-AGWRDLNKSK 403
+W GE+SNF+YL+ LN LAGR + D T +PV PWV+ D+ S+ D D +R L+K
Sbjct: 2966 RWQNGEISNFQYLMHLNTLAGRGYSDLTQYPVFPWVLADYDSESLDFSDPKTFRKLHKPM 3025
Query: 404 W-RLAKGDEQLDFTYST---SEIPH-HVSDECLSELAVCSYKARRLPLSVLRMAVRSVYE 458
+ +G+E+ Y + E+P H S V Y R P S ++
Sbjct: 3026 GCQTPEGEEEFRKRYESWDDPEVPKFHYGSHYSSAGIVLFYLIRLPPFSSENQKLQG--- 3082
Query: 459 PNEYPSTMQRLYQWTPD---------------ECIPEFY----------CDALIFRSIHD 493
++ RL+ D E IPEF+ L + +
Sbjct: 3083 -GQFDHA-DRLFNSIKDTWLSAAGKGNTSDVKELIPEFFYMPEFLENRFSLDLGEKQSGE 3140
Query: 494 GMADLAVPSWAE-SPEDFIKLHRDALESDRVSFQLHHWIDIIFGYKMSGHAAVIAKNVML 552
+ D+ +P WA S +FI HR+ALESD VS LHHWID+IFGYK G AA A NV
Sbjct: 3141 KVGDVFLPPWARGSVREFILKHREALESDYVSENLHHWIDLIFGYKQRGKAAEEAVNVFY 3200
Query: 553 -----------PLSEPTMPRST-------GR--RQLFTQPHPIRHATSRITRH 585
+++P M S G+ +QLF + H R +I H
Sbjct: 3201 HYTYEGNVDIDAVTDPAMKASILAQINHFGQTPKQLFPKAHVKRRTDRKIPLH 3253
>AT3G60920.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Beige/BEACH
(InterPro:IPR000409); BEST Arabidopsis thaliana protein
match is: WD-40 repeat family protein / beige-related
(TAIR:AT2G45540.1); Has 1795 Blast hits to 1563 proteins
in 214 species: Archae - 2; Bacteria - 29; Metazoa - 830;
Fungi - 160; Plants - 230; Viruses - 0; Other Eukaryotes
- 544 (source: NCBI BLink). | chr3:22503328-22513031
REVERSE LENGTH=1941
Length = 1941
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 344 FHQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVI-DFSSKPDDNCD-AGWRDLNK 401
+W R E+SNFEYL+ LN LAGR + D T +P+ PW++ D+ S+ D + + +RDL+K
Sbjct: 1679 MERWARWEISNFEYLMQLNTLAGRSYNDITQYPIFPWILCDYVSEILDLSNPSNYRDLSK 1738
Query: 402 ------SKWRLAKGDEQLDFTYSTSEIPH-HVSDECLSELAVCSYKARRLPLSVLRMAVR 454
+ RL K E+ ++ IP H S AV Y AR P + L + ++
Sbjct: 1739 VPIGALNPERLKKFQEKHS-SFEDPVIPKFHYGSHYSSAGAVLHYLARVEPFTTLSIQLQ 1797