Miyakogusa Predicted Gene

Lj1g3v0112880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0112880.1 Non Chatacterized Hit- tr|G6CHV1|G6CHV1_DANPL
Uncharacterized protein OS=Danaus plexippus PE=3
SV=1,33.15,5e-19,GOLD,GOLD; TRANSMEMBRANE EMP24 DOMAIN-CONTAINING
PROTEIN,NULL; coiled-coil,NULL; EMP24_GP25L,GOLD,CUFF.25248.1
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22845.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...   363   e-101
AT3G07680.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...   129   2e-30
AT1G09580.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    76   1e-14
AT1G57620.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    74   1e-13
AT1G21900.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    65   3e-11
AT1G14010.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    62   3e-10
AT1G26690.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    62   3e-10
AT1G69460.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    60   9e-10
AT2G03290.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    60   1e-09
AT3G10780.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    57   7e-09
AT3G29070.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    49   3e-06

>AT3G22845.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr3:8087373-8088550 FORWARD LENGTH=214
          Length = 214

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/214 (78%), Positives = 192/214 (89%)

Query: 2   MEGKRIANKMWMVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVVDHDI 61
           ME ++    +++++  ++L+ + +I SLSVTV++ EC+ EYVLYEGDTVSGNFVVVDHDI
Sbjct: 1   MERRQAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDI 60

Query: 62  FWGSDHPGIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPETVSFYI 121
           FWGSDHPG+D TVTSPAGN V  +KGTSGDKF+FKAP SGMYKFCFHNPYSTPETVSFYI
Sbjct: 61  FWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYI 120

Query: 122 HVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVI 181
           HVGHIPNEH+LAKDEHLDP+NVKIAELREALESV AEQKYLKARDTRHRHTNESTR RVI
Sbjct: 121 HVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVI 180

Query: 182 FYTVGEYLLLAAVSTLQVIYIRRLFSKSVAYNRV 215
           FYTVGEY+ LAA S LQV+YIR+LFSKSVAYNRV
Sbjct: 181 FYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214


>AT3G07680.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr3:2455627-2456652 FORWARD LENGTH=208
          Length = 208

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 1/203 (0%)

Query: 13  MVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPGIDL 72
           +VL+ L+ SF A +  +   +   EC      YEGDT+  +FVV+  D  W  +  G+DL
Sbjct: 7   IVLLGLLWSFQATL-GIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDL 65

Query: 73  TVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPETVSFYIHVGHIPNEHNL 132
            +  P G  +HD +     K  F     G+Y+FCF N     ET+ F + +GH       
Sbjct: 66  VIHGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQH 125

Query: 133 AKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGEYLLLA 192
           AKDEH  P+  +I++L EAL ++  EQ +L+A+  R    NE+   R +   + E   L 
Sbjct: 126 AKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALI 185

Query: 193 AVSTLQVIYIRRLFSKSVAYNRV 215
             S LQV  +RRLF + +  +RV
Sbjct: 186 GASFLQVYLLRRLFERKLGMSRV 208


>AT1G09580.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr1:3104657-3106092 FORWARD LENGTH=217
          Length = 217

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 48  DTVSGNFVVVDHDIFWGSDH---PGIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYK 104
           + +  N VV+   +    DH   P I + VTSP GN +H+++  +  +F F    SG Y 
Sbjct: 45  EEIQSNVVVLADYLIISEDHEVMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYL 104

Query: 105 FCFHNPYSTPETVSFYIHVG-----HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQ 159
            CF     +    +  I++         +  ++AK E ++ + ++I +L  A+E++    
Sbjct: 105 ACFWADEKSHGNKNVSINIDWRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENI 164

Query: 160 KYLKARDTRHRHTNESTRSRVIFYTVGEYLLLAAVSTLQVIYIRRLFSK 208
            YL+ R+   R  +E T SRV +Y++    +  AVS  QV+Y+++ F K
Sbjct: 165 LYLRNREADMRTMSEKTNSRVAWYSIMSLGVCIAVSGFQVLYLKQYFEK 213


>AT1G57620.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr1:21342863-21344581 FORWARD LENGTH=212
          Length = 212

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 13/214 (6%)

Query: 2   MEGKRIANKMWMVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVV--DH 59
           M+ K I   + +  +   LS +     L+V     +C+ E +      V  +++V+  +H
Sbjct: 1   MKKKMIPTTILLSALIFSLSPICEAVWLTVPHTGSKCVSEEI-QSNVIVLADYLVISEEH 59

Query: 60  DIFWGSDHPGIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPETVSF 119
            IF     P + + VT+P G  +H  + T+  +F F    SG Y  CF     +     F
Sbjct: 60  SIF-----PTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDF 114

Query: 120 YIHVG-----HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNE 174
            I++         +  ++A+ E ++ + ++  +L  A+E++     YL+ R+   R  +E
Sbjct: 115 SINIDWKTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSE 174

Query: 175 STRSRVIFYTVGEYLLLAAVSTLQVIYIRRLFSK 208
            T SRV +Y++    +   VS LQ++Y+++ F K
Sbjct: 175 KTNSRVAWYSIMSLGICIVVSGLQILYLKQYFEK 208


>AT1G21900.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr1:7691165-7692327 REVERSE LENGTH=216
          Length = 216

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 8/201 (3%)

Query: 13  MVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPGIDL 72
           +VL  L +++   I     T    +C+ E +      ++  +VV +H+     + P +  
Sbjct: 15  VVLFFLTVNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHN---PENTPAVSS 71

Query: 73  TVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCF----HNPYSTPETVSFYIHVGHIPN 128
            VTSP GN +H  +  +  +F F    +G Y  CF     +  + P T+     +G    
Sbjct: 72  KVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLANPITLGVDWKMGIAAK 131

Query: 129 EHN-LAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGE 187
           + + +AK E ++ + +++  L   + S+     Y+K R+   R  +E+T SRV ++++  
Sbjct: 132 DWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSIMS 191

Query: 188 YLLLAAVSTLQVIYIRRLFSK 208
             +   V   Q++Y++R F K
Sbjct: 192 LGVCVVVVGSQILYLKRYFHK 212


>AT1G14010.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr1:4800385-4801790 REVERSE LENGTH=212
          Length = 212

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 14/181 (7%)

Query: 37  ECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHP-----GIDLTVTSPAGNTVHDIKGTSGD 91
           +CI E +     T+    ++  H+     DHP      + + VTSP G   H+  G    
Sbjct: 33  KCISEEIHANAMTIGKYSIINPHE-----DHPLPSSHKVTVRVTSPQGTAYHESDGVESG 87

Query: 92  KFQFKAPASGMYKFCFHNPYSTPET---VSFYIHVG-HIPNEHNLAKDEHLDPINVKIAE 147
           +F F A  +G Y  CF      PET   + F    G H  +  N+AK   ++ +  ++ +
Sbjct: 88  QFSFVAVETGDYISCFSAVDHKPETTLIIDFDWRTGIHTKDWSNVAKKSQVETMEFEVKK 147

Query: 148 LREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGEYLLLAAVSTLQVIYIRRLFS 207
           L E +  +  E  YL+ R+    + N +T S++ + +     +  +V+ LQ  +++  F 
Sbjct: 148 LFETVNGIHDEMFYLRDREEEMHNLNIATNSKMAWLSFVSLAVCLSVAGLQFWHLKTFFQ 207

Query: 208 K 208
           K
Sbjct: 208 K 208


>AT1G26690.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr1:9224299-9225682 REVERSE LENGTH=214
          Length = 214

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 20/208 (9%)

Query: 16  MCLMLSFVARIESLSVTVH------EVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPG 69
           +C +L F+A    +S ++H        +CI E +     TV G + VV+ +      HP 
Sbjct: 8   LCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTV-GKYTVVNPN----EAHPS 62

Query: 70  -----IDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPE---TVSFYI 121
                I + VTS  GNT H  +     +F F A  SG Y  C+      PE   ++ F  
Sbjct: 63  PQSHKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEVTLSIDFDW 122

Query: 122 HVG-HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRV 180
             G    +  ++AK   ++ +   +  L E + S+  E  YL+ R+   ++ N +T S++
Sbjct: 123 RTGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKM 182

Query: 181 IFYTVGEYLLLAAVSTLQVIYIRRLFSK 208
            + +     +   V+ +Q ++++  F K
Sbjct: 183 AWLSFLSLFVCLGVAGMQFVHLKTFFEK 210


>AT1G69460.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr1:26112054-26113160 REVERSE LENGTH=214
          Length = 214

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 13/210 (6%)

Query: 8   ANKMWMVLMCLMLSFVARIESLSVTVH--EVECIYEYVLYEGDTVSGNFVVVDHDIFWGS 65
           + K+W +L+ L + +     SL   +H    +CI E +     TV    +   H+   G 
Sbjct: 5   SQKLWTMLLILAI-WSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHE---GQ 60

Query: 66  DHP---GIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPE---TVSF 119
             P    I + VTS +GN  H  +     +F F A  +G Y  CF      PE   ++ F
Sbjct: 61  ALPQTHKISVKVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDF 120

Query: 120 YIHVG-HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRS 178
               G    +  N+AK   ++ +  ++  L + + S+  E  YL+ R+   +  N ST +
Sbjct: 121 EWKTGVQSKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNT 180

Query: 179 RVIFYTVGEYLLLAAVSTLQVIYIRRLFSK 208
           ++ + +V  + +   V+ +Q ++++  F K
Sbjct: 181 KMAWLSVLSFFVCIGVAGMQFLHLKTFFEK 210


>AT2G03290.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr2:999422-1000434 FORWARD LENGTH=213
          Length = 213

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 13/183 (7%)

Query: 35  EVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPGID-----LTVTSPAGNTVHDIKGTS 89
           + +CI E +     ++   F+V  ++     +HP  D     + V  P G  +H+     
Sbjct: 31  KTKCIGEEIHENAMSIGKYFIVNPNE----DNHPLPDSHKIIVKVMPPQGKNLHEADKVE 86

Query: 90  GDKFQFKAPASGMYKFCFHNPYSTPET---VSFYIHVG-HIPNEHNLAKDEHLDPINVKI 145
             +F F A  +G Y  C       PET   + F    G H     N+AK   +D +  ++
Sbjct: 87  AGQFSFTAYENGSYVACITAIDYKPETTLTIDFDWKTGVHSKEWTNVAKKSQVDMMEYQV 146

Query: 146 AELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGEYLLLAAVSTLQVIYIRRL 205
             L + + S+  E  YL+ R+   +  N ST S++ + + G  ++  +V+ LQ  +++  
Sbjct: 147 KTLMDTVISIHEEMYYLREREEEMQELNRSTNSKMAWLSFGSLVVCLSVAGLQFWHLKTF 206

Query: 206 FSK 208
           F K
Sbjct: 207 FEK 209


>AT3G10780.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr3:3375161-3376334 FORWARD LENGTH=217
          Length = 217

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 21/202 (10%)

Query: 21  SFVARIESLSVTVHEV--ECIYEYVLYEGDTVSGNFVVV-DH---DIFWGSDHPGIDLTV 74
           S    +E++ +TV E    C+YE        +  N VVV D+   D  +    P +D+ V
Sbjct: 19  SLFPGVEAIWLTVPESGERCVYE-------EIQANVVVVLDYICIDDAFTQLGPTLDVRV 71

Query: 75  TSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCF-------HNPYSTPETVSFYIHVG-HI 126
           TSP G  ++ I   +  +  F    SG +  C        H+  ++   VS    +G   
Sbjct: 72  TSPYGKELYKIANVTHGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRA 131

Query: 127 PNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVG 186
            +  ++AK E ++ + ++I    E   ++ A   YL+ R+   R  NE T +RV    + 
Sbjct: 132 KDWDSVAKKEKIEGVELEIRRSTEYASAIRANILYLRIREAYMREINEKTNTRVNQLGLM 191

Query: 187 EYLLLAAVSTLQVIYIRRLFSK 208
              +   VS  QV+Y++R F K
Sbjct: 192 SLGVAIVVSISQVLYLKRYFLK 213


>AT3G29070.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
           protein | chr3:11050193-11051153 FORWARD LENGTH=225
          Length = 225

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 72  LTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPE---TVSFYIHVG-HIP 127
           +TV+SP G + H  +     KF F A  +G Y  CF  P   P     V F    G    
Sbjct: 81  VTVSSPKGKSHHHAENVESGKFVFTAEETGDYMTCFVAPGYRPTAKFAVDFEWKSGVEAK 140

Query: 128 NEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGE 187
           +   +AK   +  + V++ +L +  E++  E   L  R+   +  N ST SR+   ++  
Sbjct: 141 DWTTIAKRGQITMLEVEVRKLLDVTETIHEEMFQLIEREREMQELNRSTNSRMAALSLLS 200

Query: 188 YLLLAAVSTLQVIYIRRLFSK 208
           +++  +V+ LQ+ +++    +
Sbjct: 201 FVVTMSVAGLQLRHLKSFLER 221