Miyakogusa Predicted Gene
- Lj1g3v0112740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0112740.1 tr|A4S9S2|A4S9S2_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_93935,30.12,5e-17,PROTEASE-RELATED,NULL; PEPTIDASE M20 FAMILY
MEMBER,NULL,NODE_49376_length_1359_cov_188.061813.path2.1
(349 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38225.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 347 5e-96
AT4G38225.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 347 6e-96
AT4G38225.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 281 6e-76
>AT4G38225.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink). |
chr4:17927230-17928782 FORWARD LENGTH=365
Length = 365
Score = 347 bits (891), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 162/285 (56%), Positives = 214/285 (75%)
Query: 59 WSQFAKRVSGEWDGFGADFSNQGKTIELPESVVPEAYREWEVKVYDWQTQCPTLAEPEDH 118
WS+FA+ VSGEWDGFGADF+ +G+ +ELPESVVPEA+REWEVKV+DWQTQCPTLA+P
Sbjct: 74 WSEFAQNVSGEWDGFGADFTCEGQPLELPESVVPEAFREWEVKVFDWQTQCPTLAQPNSL 133
Query: 119 VLKYKSVQLLPTVGCEADAATIYSVDERKVGGENNGVTSFAYQSSGSYIAVWQKKDNFLE 178
YKS++LLPTVGCEADAAT YS+D+R +GG + +F+Y +GSY+AVW ++N LE
Sbjct: 134 SFLYKSIKLLPTVGCEADAATRYSIDQRIIGGGKSSALAFSYSVTGSYVAVWPLRNNQLE 193
Query: 179 LEYCLINPQEFESRVRIIQHIHIVDNTKMVLQSVRVFREQWYGPFRNGEQLGGCAIRDSA 238
+E+CLINP++ ESRVRI Q + + + T M LQSV+VF EQWYGPFR+G+QLGGCAIR S
Sbjct: 194 VEHCLINPKDKESRVRIFQVVSLAETTNMSLQSVKVFCEQWYGPFRDGDQLGGCAIRSSG 253
Query: 239 FASTSPIAASEVAGIWQGSKAVATFGTTKTKIFRELVGENVQNSVRDGDKDILLPKQLWC 298
FA+T AAS V G W+ A +F + +++ GE V VR+ + +LLP++LWC
Sbjct: 254 FAATPTTAASVVTGSWRVLLATTSFHASDFGCIQQVTGEKVIEIVREENDLLLLPQELWC 313
Query: 299 SLKQNEDGETQSEVGWLLDHGKAITASCLFSSPAKLKETSIALET 343
SL+Q +D E VGW+ + G AIT+SC+FSS +KLKE ++ ET
Sbjct: 314 SLQQGKDRERVFSVGWVFEPGHAITSSCVFSSDSKLKEVTMGRET 358
>AT4G38225.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink). |
chr4:17927230-17928613 FORWARD LENGTH=363
Length = 363
Score = 347 bits (890), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 162/285 (56%), Positives = 214/285 (75%)
Query: 59 WSQFAKRVSGEWDGFGADFSNQGKTIELPESVVPEAYREWEVKVYDWQTQCPTLAEPEDH 118
WS+FA+ VSGEWDGFGADF+ +G+ +ELPESVVPEA+REWEVKV+DWQTQCPTLA+P
Sbjct: 74 WSEFAQNVSGEWDGFGADFTCEGQPLELPESVVPEAFREWEVKVFDWQTQCPTLAQPNSL 133
Query: 119 VLKYKSVQLLPTVGCEADAATIYSVDERKVGGENNGVTSFAYQSSGSYIAVWQKKDNFLE 178
YKS++LLPTVGCEADAAT YS+D+R +GG + +F+Y +GSY+AVW ++N LE
Sbjct: 134 SFLYKSIKLLPTVGCEADAATRYSIDQRIIGGGKSSALAFSYSVTGSYVAVWPLRNNQLE 193
Query: 179 LEYCLINPQEFESRVRIIQHIHIVDNTKMVLQSVRVFREQWYGPFRNGEQLGGCAIRDSA 238
+E+CLINP++ ESRVRI Q + + + T M LQSV+VF EQWYGPFR+G+QLGGCAIR S
Sbjct: 194 VEHCLINPKDKESRVRIFQVVSLAETTNMSLQSVKVFCEQWYGPFRDGDQLGGCAIRSSG 253
Query: 239 FASTSPIAASEVAGIWQGSKAVATFGTTKTKIFRELVGENVQNSVRDGDKDILLPKQLWC 298
FA+T AAS V G W+ A +F + +++ GE V VR+ + +LLP++LWC
Sbjct: 254 FAATPTTAASVVTGSWRVLLATTSFHASDFGCIQQVTGEKVIEIVREENDLLLLPQELWC 313
Query: 299 SLKQNEDGETQSEVGWLLDHGKAITASCLFSSPAKLKETSIALET 343
SL+Q +D E VGW+ + G AIT+SC+FSS +KLKE ++ ET
Sbjct: 314 SLQQGKDRERVFSVGWVFEPGHAITSSCVFSSDSKLKEVTMGRET 358
>AT4G38225.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink). |
chr4:17927230-17928274 FORWARD LENGTH=308
Length = 308
Score = 281 bits (718), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 162/205 (79%)
Query: 59 WSQFAKRVSGEWDGFGADFSNQGKTIELPESVVPEAYREWEVKVYDWQTQCPTLAEPEDH 118
WS+FA+ VSGEWDGFGADF+ +G+ +ELPESVVPEA+REWEVKV+DWQTQCPTLA+P
Sbjct: 74 WSEFAQNVSGEWDGFGADFTCEGQPLELPESVVPEAFREWEVKVFDWQTQCPTLAQPNSL 133
Query: 119 VLKYKSVQLLPTVGCEADAATIYSVDERKVGGENNGVTSFAYQSSGSYIAVWQKKDNFLE 178
YKS++LLPTVGCEADAAT YS+D+R +GG + +F+Y +GSY+AVW ++N LE
Sbjct: 134 SFLYKSIKLLPTVGCEADAATRYSIDQRIIGGGKSSALAFSYSVTGSYVAVWPLRNNQLE 193
Query: 179 LEYCLINPQEFESRVRIIQHIHIVDNTKMVLQSVRVFREQWYGPFRNGEQLGGCAIRDSA 238
+E+CLINP++ ESRVRI Q + + + T M LQSV+VF EQWYGPFR+G+QLGGCAIR S
Sbjct: 194 VEHCLINPKDKESRVRIFQVVSLAETTNMSLQSVKVFCEQWYGPFRDGDQLGGCAIRSSG 253
Query: 239 FASTSPIAASEVAGIWQGSKAVATF 263
FA+T AAS V G W+ A +F
Sbjct: 254 FAATPTTAASVVTGSWRVLLATTSF 278