Miyakogusa Predicted Gene

Lj1g3v0112600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0112600.1 Non Chatacterized Hit- tr|D7MBC7|D7MBC7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,29.11,3e-17,seg,NULL,CUFF.25213.1
         (437 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22780.1 | Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC domai...    59   9e-09
AT4G14770.1 | Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2 | c...    52   6e-07

>AT3G22780.1 | Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC
           domain-containing protein | chr3:8048927-8052058 FORWARD
           LENGTH=695
          Length = 695

 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 124/308 (40%), Gaps = 50/308 (16%)

Query: 16  EGSPVFNFINSLSPLKPVKPAYAXXXXXXXXXXXXXXXXXXXHASCHKESRFLRRHNLLD 75
           E SPVFN+I++LSP++ VK                       H   H+ESRF R HN +D
Sbjct: 22  EDSPVFNYISNLSPIESVKSISTAQTFSSLSFTSPPPVFTSPHVISHRESRFFRCHNSVD 81

Query: 76  TSTPKVLSEDVNKIYSCEEAPKHSTHACHDSNEQQENTDQRISVGDSSIEPSSEYTRFSS 135
            S   + S D + +      P        D N++    D+     ++S+E        SS
Sbjct: 82  RSK-HLESLDGSAVKGEVVVP-----LVEDLNKEASLEDEE----ETSVET-------SS 124

Query: 136 ELPGALKYNS--GGHGYSPLLCDNMANTCFELP-GKPATYAACVQEGPKKDSAVGNMHLQ 192
           ELP  +K++S    H  SP   D +     + P G   + +  V  G      + NM + 
Sbjct: 125 ELPQIMKFDSQTSEHSDSPCTEDVVIEASSDPPRGDNGSSSEDVTMG------LQNMLVV 178

Query: 193 RVCH-IGGRENLITDASNRLILGSPNVTEAFRGLMNQQLDPSIDLSNYFTYKYGRMQPVN 251
           R  +   G   LI+DA+  L+  SPN +EAFR L++               K    +   
Sbjct: 179 REGNDTPGCGRLISDATELLVFRSPNDSEAFRCLVD---------------KISSSERRF 223

Query: 252 LAASGSEHGIQYHPNGPITGQTQNNLPSVALMTSNPSEKMNDELLQATYRGM-RRSLDYE 310
            A   S      + + P  G +  N P   L T       N+ +      GM RR LD+E
Sbjct: 224 CAGVKSTKRPDINKDIPANGSSNENQPLAVLPT-------NESVFNLHRGGMRRRCLDFE 276

Query: 311 MASVQRKN 318
           M   ++K+
Sbjct: 277 MPGKRKKD 284


>AT4G14770.1 | Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2 |
           chr4:8481522-8484825 REVERSE LENGTH=674
          Length = 674

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 90/237 (37%), Gaps = 42/237 (17%)

Query: 5   TPERNNTPLST-------EGSPVFNFINSLSPLKPVKPAYAXXXXXXXXXXXXXXXXXXX 57
           TP+++ T + T       E SPVFN+INSLSP++PV+                       
Sbjct: 3   TPQKSITQIGTPISKSRFEDSPVFNYINSLSPIRPVRSIPNPNQFSSLNFTSPPSVFTSP 62

Query: 58  H-ASCHKESRFLRRHNLLDTSTPKVLSEDVNKIYSCEEAPKHS--THACHDSNEQQENTD 114
           H  S HKESRF + HN   +     +    ++  S EE P     T   +  +  +E   
Sbjct: 63  HLTSSHKESRFFKTHNSSSSDPTNSVESQEDESTSHEEVPAEGEDTKGLNIDDCMREEAS 122

Query: 115 QRISVGDSSIEPSSEYTRFSSELPGALKYNSGGHGYSPLLCDNMANTCFELPGKPATYAA 174
              ++ DS   P    T   S +P A      G                          +
Sbjct: 123 VETNLDDSVASPCGGNTTDLSLVPYAPTRGEDG--------------------------S 156

Query: 175 CVQEGPKKDSAVGNMH--LQRVCHIGGRENLITDASNRLILGSPNVTEAFRGLMNQQ 229
           C   G +    +  MH  +Q        E+LI DAS  LI  SP+ +EAFR  M Q+
Sbjct: 157 CEDNGME----LQKMHDNVQGKTETPDWESLIADASELLIFDSPDASEAFRCFMMQR 209