Miyakogusa Predicted Gene

Lj1g3v0074750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0074750.1 tr|B9IJB1|B9IJB1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_825475 PE=4
SV=1,28.76,6e-18,seg,NULL,CUFF.25180.1
         (380 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09460.1 | Symbols:  | sequence-specific DNA binding transcri...    84   2e-16
AT5G50010.1 | Symbols:  | sequence-specific DNA binding transcri...    83   3e-16
AT5G64340.1 | Symbols: SAC51 | sequence-specific DNA binding tra...    79   6e-15

>AT5G09460.1 | Symbols:  | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:2944437-2945417 REVERSE LENGTH=326
          Length = 326

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 124/245 (50%), Gaps = 30/245 (12%)

Query: 127 QKRFLVIDQTGDQTTLIYSSRFGSPVECLASWDSKLHGPNNLNTHNEPPLRGDVNNVVGV 186
           +KRF+V DQ+G+QT L+   + G P+   +S D++  G      H E     D       
Sbjct: 92  RKRFIVFDQSGEQTRLL---QCGFPLRFPSSMDAE-RGNILGALHPEKGFSKD------- 140

Query: 187 GPALDDKV---DENQGTDTESEMHEDTEEINALLXXXXXXXXXXXXX--VTSTGHSPSTM 241
             A+ +K+   ++++  + +SEMHEDTEEINALL               V STGHSP T+
Sbjct: 141 -HAIQEKILQHEDHENGEEDSEMHEDTEEINALLYSDDDDNDDWESDDEVMSTGHSPFTV 199

Query: 242 TTHDNPAPLLGAEE--EVASSRAGEAKKRKRADGDAYGDHMQFMDTANSLNPNRPIDIED 299
              +  A  +  EE  E  S+  G   KR++       DH  + D++ SL     +    
Sbjct: 200 ---EQQACNITTEELDETESTVDGPLLKRQK-----LLDH-SYRDSSPSLVGTTKVKGLS 250

Query: 300 DDAESRCSSDNFSQGEMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRC 359
           D  E+   S+  S+ E GS   +++ RK+KI   L +L+ +VPG K K+ + LLDEAI  
Sbjct: 251 D--ENLPESNISSKQETGSGLSDEQSRKDKIHTALRILESVVPGAKGKEALLLLDEAIDY 308

Query: 360 LKSLK 364
           LK LK
Sbjct: 309 LKLLK 313


>AT5G50010.1 | Symbols:  | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:20349556-20350491 FORWARD LENGTH=311
          Length = 311

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 56/293 (19%)

Query: 81  GWFYCLPRFRQGFTPAPSSTAEVKPPASHGKSLRDESVPNRDESLPQKRFLVIDQTGDQT 140
           GW +     +Q F P  +   +  P    G       +   +E   QKRFLV DQ+GDQT
Sbjct: 66  GWVHGSSHLQQQFLPPQNQCMKQVPLQVDG------VISKAEEQCSQKRFLVFDQSGDQT 119

Query: 141 TLIYSSRFGSPVECLASWDSKLHGPNNLNTHNEPPLRGDVNNVVGVGPALDDKVDENQGT 200
           TL+ +S      E L     K H   ++    E   R + +  V  G          QG 
Sbjct: 120 TLLLASDIRKSFETL-----KQHACPDMK---EELQRSNKDLFVCHGM---------QG- 161

Query: 201 DTESEMHEDTEEINALLXXXXXX-XXXXXXXVTSTGHSPSTMTT-HDNPAPLLGAEEEVA 258
           ++E ++ ED+EE+NALL              VTS  HSPS + +  ++    LG+     
Sbjct: 162 NSEPDLKEDSEELNALLYSEDESGYCSEEDEVTSADHSPSIVVSGREDQKTFLGS----- 216

Query: 259 SSRAGEAKKRKRADGDAYGDHMQFMDTANSLNPNRPIDIEDDDAESRC-SSDN--FSQGE 315
             +   AKKRK             ++T+N             DAES C S DN   S  +
Sbjct: 217 YGQPLNAKKRK------------ILETSNE---------SMRDAESSCGSCDNTRISFLK 255

Query: 316 MGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLKVKAR 368
              L+ NK + +EKI + +S+L+ +VPG +  DPI ++D AI  LKSLK++A+
Sbjct: 256 RSKLSSNK-IGEEKIFETVSLLRSVVPGEELVDPILVIDRAIDYLKSLKMEAK 307


>AT5G64340.1 | Symbols: SAC51 | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:25730890-25731936 REVERSE LENGTH=348
          Length = 348

 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 115/246 (46%), Gaps = 40/246 (16%)

Query: 127 QKRFLVIDQTGDQTTLI---YSSRFGSPVECLASWDSKLHGPNNLNTHNEPPLRGDVNNV 183
           QKR L+ DQ+GDQT L+   +  RF S                  +   EP     ++ +
Sbjct: 97  QKRLLIFDQSGDQTRLLQCPFPLRFPS------------------HAAAEPV---KLSEL 135

Query: 184 VGVGPALDDKVDENQGTD-TESEMHEDTEEINALLXXXXXXXXXXXXX--VTSTGHSPST 240
            G+  A  +  +E   +D TESEMHEDTEEINALL               V STGHSP  
Sbjct: 136 QGIEKAFKEDGEEFHKSDGTESEMHEDTEEINALLYSDDDYDDDCESDDEVMSTGHSPYP 195

Query: 241 MTTHDNPAPLLGAEEEVASSRAGEAKKRKRADG-DAYGDHMQFMDTANSLNPNRPIDIED 299
                N   L    EE+     G  K++K  D  +   D    + T +S   N    ++D
Sbjct: 196 NEGVCNKREL----EEID----GPCKRQKLLDKVNNISDLSSLVGTESSTQLNGSSFLKD 247

Query: 300 DDA-ESRCSSDNFSQGEMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIR 358
               ES+  S   ++ + GS   N++ +K+KI+  L +L+ +VPG K  + + LLDEAI 
Sbjct: 248 KKLPESKTIS---TKEDTGSGLSNEQSKKDKIRTALKILESVVPGAKGNEALLLLDEAID 304

Query: 359 CLKSLK 364
            LK LK
Sbjct: 305 YLKLLK 310