Miyakogusa Predicted Gene

Lj1g3v0054720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0054720.1 tr|C1N8B3|C1N8B3_MICPC Heat shock protein 70kDa
OS=Micromonas pusilla (strain CCMP1545) GN=HSP70G
PE,32.18,4e-19,Actin-like ATPase domain,NULL; no description,NULL;
seg,NULL; HSP70,Heat shock protein 70 family; SU,CB827219.path1.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32120.2 | Symbols: HSP70T-2 | heat-shock protein 70T-2 | chr...   145   1e-35
AT2G32120.1 | Symbols: HSP70T-2 | heat-shock protein 70T-2 | chr...   145   1e-35

>AT2G32120.2 | Symbols: HSP70T-2 | heat-shock protein 70T-2 |
           chr2:13651720-13653411 REVERSE LENGTH=563
          Length = 563

 Score =  145 bits (366), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/175 (44%), Positives = 101/175 (57%), Gaps = 20/175 (11%)

Query: 1   MGSGSEKIALIFNMGAGYCDVAVTVTAGGVSQIKALAGSTIGGEDLLQNMMHHLLPDCEN 60
           MGSGSE++A+IFNMGAGYCDVAVT TAGGVSQIKALAGS IGGED+LQN + H+ P  E 
Sbjct: 222 MGSGSERLAVIFNMGAGYCDVAVTATAGGVSQIKALAGSPIGGEDILQNTIRHIAPPNE- 280

Query: 61  IFKNHGVKEIKSMGLLRVATXXXXXXXXXXXXXX---------KINKVIDCXXXXXXXXX 111
                     ++ GLLRVA                        KI+KV+D          
Sbjct: 281 ----------EASGLLRVAAQDAIHRLTDQENVQIEVDLGNGNKISKVLDRLEFEEVNQK 330

Query: 112 XXXXCESLIIQCLQDSKXXXXXXXXXXXXGGCSYIPRVKNLVTNICKGKKLYEGI 166
               CE L++QCL+D++            GGCSYIP+V+ ++ N+CK  ++Y+G+
Sbjct: 331 VFEECERLVVQCLRDARVNGGDIDDLIMVGGCSYIPKVRTIIKNVCKKDEIYKGV 385


>AT2G32120.1 | Symbols: HSP70T-2 | heat-shock protein 70T-2 |
           chr2:13651720-13653411 REVERSE LENGTH=563
          Length = 563

 Score =  145 bits (366), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/175 (44%), Positives = 101/175 (57%), Gaps = 20/175 (11%)

Query: 1   MGSGSEKIALIFNMGAGYCDVAVTVTAGGVSQIKALAGSTIGGEDLLQNMMHHLLPDCEN 60
           MGSGSE++A+IFNMGAGYCDVAVT TAGGVSQIKALAGS IGGED+LQN + H+ P  E 
Sbjct: 222 MGSGSERLAVIFNMGAGYCDVAVTATAGGVSQIKALAGSPIGGEDILQNTIRHIAPPNE- 280

Query: 61  IFKNHGVKEIKSMGLLRVATXXXXXXXXXXXXXX---------KINKVIDCXXXXXXXXX 111
                     ++ GLLRVA                        KI+KV+D          
Sbjct: 281 ----------EASGLLRVAAQDAIHRLTDQENVQIEVDLGNGNKISKVLDRLEFEEVNQK 330

Query: 112 XXXXCESLIIQCLQDSKXXXXXXXXXXXXGGCSYIPRVKNLVTNICKGKKLYEGI 166
               CE L++QCL+D++            GGCSYIP+V+ ++ N+CK  ++Y+G+
Sbjct: 331 VFEECERLVVQCLRDARVNGGDIDDLIMVGGCSYIPKVRTIIKNVCKKDEIYKGV 385