Miyakogusa Predicted Gene

Lj1g3v0054690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0054690.1 tr|G7JG63|G7JG63_MEDTR Phenylalanyl-tRNA
synthetase beta subunit OS=Medicago truncatula
GN=MTR_4g070,90.98,0,Class II aaRS and biotin synthetases,NULL;
tRNA-synt_2d,Phenylalanyl-tRNA synthetase; no description,CUFF.25211.1
         (488 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39280.1 | Symbols:  | phenylalanyl-tRNA synthetase, putative...   826   0.0  
AT4G39280.2 | Symbols:  | phenylalanyl-tRNA synthetase, putative...   826   0.0  
AT3G58140.1 | Symbols:  | phenylalanyl-tRNA synthetase class IIc...    66   6e-11

>AT4G39280.1 | Symbols:  | phenylalanyl-tRNA synthetase, putative /
           phenylalanine--tRNA ligase, putative |
           chr4:18281641-18284831 REVERSE LENGTH=485
          Length = 485

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/488 (79%), Positives = 437/488 (89%), Gaps = 4/488 (0%)

Query: 1   MAEEAVLSYLENNKEISDSGEFAAERGLDHNEIVNVIKSLHGFRYVDAEDIKRETWVLTD 60
           MAEEA+L +L+NN++I+DSG+F+AE  +DHNE+VNVIKSLHGFRY+D +DIK+ETW+LTD
Sbjct: 1   MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTD 60

Query: 61  EGNTYTTVGSPEAQLMLAIPPEG-ISRDELQKKLGPSIFKIACAQAAKNKWVEMGKQLIT 119
           EG  Y   GSPE QL LA+P EG IS+DELQKKL P++FKI C+QA KNKWVEMGKQ ++
Sbjct: 61  EGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQ-VS 119

Query: 120 RRVEHVDDRVKDLLLKIQQGQGIGSDDIKALKTRKLIVPQTWKGYSVKKGPNYAPKRKKV 179
           R+V+ V+D+VK  LL+IQQG+    + I +LK RKLIVPQ WKGYSVKKGPNYAP+RKKV
Sbjct: 120 RKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKV 179

Query: 180 VTDLTRDNFQSGEWKELEFKEYNYSAKGQPLESGHLHPLLKVRAQLKQIFLCMGFEEMPT 239
            TDLTR+N Q+  WKELEFKEYN+ AKG P+++GHLH LLKVR Q K IF+ MGFEEMPT
Sbjct: 180 ATDLTRENLQN--WKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPT 237

Query: 240 NNFVESSFWNFDALFQPQQHPARDSHDTFFLEAPSTTKELPEDYVQRVQQVHESGGYGSR 299
           NN+VESSFWNFDALFQPQQHPARDSHDTFFL+ PSTT+ LPEDYV+RV++VHESGGYGSR
Sbjct: 238 NNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSR 297

Query: 300 GYAYIWKREEANKNLLRTHTTAVSSRMLYQLAQKPFSPKKYFSIDRVFRNEAVDRTHLAE 359
           GY Y WKREEANKNLLRTHTTAVSSRMLY LAQKPF PKKYFSIDRVFRNEAVDRTHLAE
Sbjct: 298 GYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFSIDRVFRNEAVDRTHLAE 357

Query: 360 FHQIEGLVCDRGLTLCDLIGVLHDFFSRMGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKW 419
           FHQIEGL+CDRGLTL DLIGVL DFFSR+GM+KL+FKPAYNPYTEPSMEIFSYHEG  KW
Sbjct: 358 FHQIEGLICDRGLTLGDLIGVLEDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLGKW 417

Query: 420 VEVGNSGMFRPEMLQPMGLPEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKK 479
           VE+GNSGMFRPEML PMGLPEDV+VIAWGLSLERPTMILYGIDNIRDLFGHKVDL LIK+
Sbjct: 418 VEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLDLIKR 477

Query: 480 NPICRLGI 487
           NPICR+GI
Sbjct: 478 NPICRIGI 485


>AT4G39280.2 | Symbols:  | phenylalanyl-tRNA synthetase, putative /
           phenylalanine--tRNA ligase, putative |
           chr4:18280292-18284831 REVERSE LENGTH=485
          Length = 485

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/488 (79%), Positives = 437/488 (89%), Gaps = 4/488 (0%)

Query: 1   MAEEAVLSYLENNKEISDSGEFAAERGLDHNEIVNVIKSLHGFRYVDAEDIKRETWVLTD 60
           MAEEA+L +L+NN++I+DSG+F+AE  +DHNE+VNVIKSLHGFRY+D +DIK+ETW+LTD
Sbjct: 1   MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTD 60

Query: 61  EGNTYTTVGSPEAQLMLAIPPEG-ISRDELQKKLGPSIFKIACAQAAKNKWVEMGKQLIT 119
           EG  Y   GSPE QL LA+P EG IS+DELQKKL P++FKI C+QA KNKWVEMGKQ ++
Sbjct: 61  EGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQ-VS 119

Query: 120 RRVEHVDDRVKDLLLKIQQGQGIGSDDIKALKTRKLIVPQTWKGYSVKKGPNYAPKRKKV 179
           R+V+ V+D+VK  LL+IQQG+    + I +LK RKLIVPQ WKGYSVKKGPNYAP+RKKV
Sbjct: 120 RKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKV 179

Query: 180 VTDLTRDNFQSGEWKELEFKEYNYSAKGQPLESGHLHPLLKVRAQLKQIFLCMGFEEMPT 239
            TDLTR+N Q+  WKELEFKEYN+ AKG P+++GHLH LLKVR Q K IF+ MGFEEMPT
Sbjct: 180 ATDLTRENLQN--WKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPT 237

Query: 240 NNFVESSFWNFDALFQPQQHPARDSHDTFFLEAPSTTKELPEDYVQRVQQVHESGGYGSR 299
           NN+VESSFWNFDALFQPQQHPARDSHDTFFL+ PSTT+ LPEDYV+RV++VHESGGYGSR
Sbjct: 238 NNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSR 297

Query: 300 GYAYIWKREEANKNLLRTHTTAVSSRMLYQLAQKPFSPKKYFSIDRVFRNEAVDRTHLAE 359
           GY Y WKREEANKNLLRTHTTAVSSRMLY LAQKPF PKKYFSIDRVFRNEAVDRTHLAE
Sbjct: 298 GYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFSIDRVFRNEAVDRTHLAE 357

Query: 360 FHQIEGLVCDRGLTLCDLIGVLHDFFSRMGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKW 419
           FHQIEGL+CDRGLTL DLIGVL DFFSR+GM+KL+FKPAYNPYTEPSMEIFSYHEG  KW
Sbjct: 358 FHQIEGLICDRGLTLGDLIGVLEDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLGKW 417

Query: 420 VEVGNSGMFRPEMLQPMGLPEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKK 479
           VE+GNSGMFRPEML PMGLPEDV+VIAWGLSLERPTMILYGIDNIRDLFGHKVDL LIK+
Sbjct: 418 VEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLDLIKR 477

Query: 480 NPICRLGI 487
           NPICR+GI
Sbjct: 478 NPICRVGI 485


>AT3G58140.1 | Symbols:  | phenylalanyl-tRNA synthetase class IIc
           family protein | chr3:21529988-21532386 REVERSE
           LENGTH=429
          Length = 429

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 72/283 (25%)

Query: 203 YSAKGQPLESGHLHPLLKVRAQLKQIF---LCMGFEEMPTNNFVESSFWNFDALFQPQQH 259
           +S  G  L     HP+  ++  +   F       FE+    + + ++  NFD +  P  H
Sbjct: 82  FSKLGMQLHRRDKHPIGILKNAIYDYFDSNYSNKFEKFEDLSPIVTTKQNFDDVLVPADH 141

Query: 260 PARDSHDTFFLEAPSTTKELPEDYVQRVQQVHESGGYGSRGYAYIWKREEANKNLLRTHT 319
            +R  +DT+++++                                       + +LR HT
Sbjct: 142 VSRSLNDTYYVDS---------------------------------------QTVLRCHT 162

Query: 320 TAVSSRMLYQLAQKPFSPKKYFSIDRVFRNEAVDRTHLAEFHQIEG-------------- 365
           +A  + +L +         ++     V+R +++D TH   FHQ+EG              
Sbjct: 163 SAHQAELLRK------GHSRFLVTGDVYRRDSIDSTHYPVFHQMEGFCVFSPEDWNGSGK 216

Query: 366 ---LVCDRGLTLCDLIGVLHDFFSRMGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEV 422
              L     L  C L G+    F   G  ++++   Y P+T PS E+  Y +  + W+EV
Sbjct: 217 DSTLYAAEDLKKC-LEGLARHLF---GSVEMRWVDTYFPFTNPSFELEIYFK--EDWLEV 270

Query: 423 GNSGMFRPEMLQPMGLPEDVQVIAWGLSLERPTMILYGIDNIR 465
              G+    +L+  GL  +V   A+GL LER  M+L+ I +IR
Sbjct: 271 LGCGVTEQVILKQSGLENNV-AWAFGLGLERLAMVLFDIPDIR 312