Miyakogusa Predicted Gene
- Lj1g3v0052650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0052650.1 Non Chatacterized Hit- tr|I1LFS4|I1LFS4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49548
PE,85.31,0,SNF2_N,SNF2-related; Helicase_C,Helicase, C-terminal; no
description,NULL; SWI/SNF-RELATED MATRIX-AS,CUFF.25170.1
(1072 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 1423 0.0
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 1318 0.0
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 554 e-157
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 554 e-157
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 554 e-157
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 476 e-134
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 474 e-133
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 460 e-129
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 460 e-129
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 458 e-128
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 458 e-128
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 458 e-128
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 407 e-113
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 400 e-111
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 353 3e-97
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 339 8e-93
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 333 6e-91
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 332 8e-91
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 327 2e-89
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 327 3e-89
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 278 2e-74
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 265 1e-70
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 247 3e-65
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 245 1e-64
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 245 1e-64
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 244 2e-64
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 234 3e-61
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 232 1e-60
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 229 1e-59
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 228 2e-59
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 146 1e-34
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 122 1e-27
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 111 3e-24
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 101 2e-21
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 100 4e-21
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 100 4e-21
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 99 1e-20
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 99 2e-20
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 99 2e-20
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 99 2e-20
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 96 1e-19
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 92 2e-18
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 87 8e-17
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 84 7e-16
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 83 1e-15
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 81 3e-15
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 81 5e-15
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 79 2e-14
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 79 2e-14
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 77 8e-14
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 77 9e-14
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 76 2e-13
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 75 2e-13
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 73 9e-13
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 67 7e-11
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 64 5e-10
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 64 5e-10
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 64 6e-10
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 56 1e-07
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 1423 bits (3683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/1061 (67%), Positives = 838/1061 (78%), Gaps = 14/1061 (1%)
Query: 4 QALIGALNLISRNLPLPPDLFTTVSSIYH--RXXXXXXXXXXXXXXXXXXXXXXXXXXDL 61
++LI ALN ISR+LPLPP LFT VSSIYH DL
Sbjct: 23 KSLICALNYISRDLPLPPHLFTAVSSIYHGASSSSLSDSDVSPPLPTSPPANKAPYGADL 82
Query: 62 LADLQDALSNHR--ASSASKLDQATETRYQTLIQHRLTQLQELPSTRGDNLQTTCLLEFY 119
+ + +DAL R S S+L Q + R ++ IQ RL++L+ELPSTRG++LQ CLLE Y
Sbjct: 83 MGEFEDALLKQRPDCESGSRLIQLLDNRNKSHIQRRLSELEELPSTRGEDLQAKCLLELY 142
Query: 120 GLKLAELQRKVRTDVSSEYWLRVQCACPDKQLYDWGMMRLRRPPYGVGDPFAMDADDQIR 179
GLKL ELQ KVRT VSSE+WLR+ CA Q++DWGMMRL RP YGVGDPFAM+ADDQ R
Sbjct: 143 GLKLRELQGKVRTAVSSEFWLRLNCADVSSQVFDWGMMRLPRPFYGVGDPFAMEADDQFR 202
Query: 180 KKRDAERLSRLEEQTKNHIETRKRRFFAEILNAVREFQLQIQASLKRRKQRNDGVQAWHG 239
KKRDAERLSRLEE+ KN IET KR+FFAE+LNAVREFQLQIQA+ KRR+QRNDGVQAWHG
Sbjct: 203 KKRDAERLSRLEEEEKNLIETAKRKFFAEVLNAVREFQLQIQATQKRRRQRNDGVQAWHG 262
Query: 240 RQRQRATRAEKLRFQALKSDDQEAYMRMVKESXXXXXXXXXXXXXXXXXXXGAAVQRQRD 299
RQRQRATRAEKLR ALKSDDQEAYM++VKES GAAVQRQ+D
Sbjct: 263 RQRQRATRAEKLRLMALKSDDQEAYMKLVKESKNERLTTLLEETNKLLANLGAAVQRQKD 322
Query: 300 SKKSDGIXXXXXXXXXXXXXXXXKN---KDSPLDEDVDLIDSDYNGDTSDLLEGQRQYNS 356
+K +GI ++ +D D+D+D+ +SD N D++DLLEGQRQYNS
Sbjct: 323 AKLPEGIDLLKDSESDLSELDAPRSEPLQDLLPDQDIDITESDNNDDSNDLLEGQRQYNS 382
Query: 357 AIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLI 416
AIHSIQEKVTEQPS+L+GGELRSYQ+EGLQWM+SLFNNNLNGILADEMGLGKTIQTISLI
Sbjct: 383 AIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLI 442
Query: 417 AHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGK 476
A+L+E KGV GP+LIVAPKAVLPNW+NEF+TW PSI LYDGR++ERKA++E+++GEGK
Sbjct: 443 AYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGK 502
Query: 477 FNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGT 536
FNVL+THYDLIMRDKAFLKKI W Y+IVDEGHRLKNHE ALA+TL + Y I+RRLLLTGT
Sbjct: 503 FNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGT 562
Query: 537 PIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIR 596
PIQNSLQELWSLLNFLLP IFNSV NFE+WFNAPFADR +VSLTDEE+LLII RLH VIR
Sbjct: 563 PIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIR 622
Query: 597 PFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLT 656
PFILRRKK+EVEKFLPGK+QVILKCDMSAWQKVYY+QVTD+GRVGL TGSGKSKSLQNLT
Sbjct: 623 PFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLT 682
Query: 657 MQLRKCCNHPYLFV-GDYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRL 715
MQLRKCCNHPYLFV GDY+M++ K EI+RASGKFELLDRLLPKLR+AGHR+LLFSQMTRL
Sbjct: 683 MQLRKCCNHPYLFVGGDYNMWK-KPEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRL 741
Query: 716 MDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTA 775
+D+LEIYL L+DYK+LRLDG+TKT++RG LL++FN PDSPYFMFLLSTRAGGLGLNLQTA
Sbjct: 742 IDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTA 801
Query: 776 DTVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKV 835
DTVIIFDSDWNPQMDQQAEDRAHRIGQKK RAKQKMGIDAKV
Sbjct: 802 DTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKV 861
Query: 836 IQAGLFNTTSTAQDRREMLEVIMRRGTSSLGTDVPSEREINRLAARSDEEFWLFERMDEE 895
IQAGLFNTTSTAQDRREMLE IMR+GTSSLGTDVPSEREINRLAARS++EFW+FERMDEE
Sbjct: 862 IQAGLFNTTSTAQDRREMLEEIMRKGTSSLGTDVPSEREINRLAARSEDEFWMFERMDEE 921
Query: 896 RRLKENYRSRLMEEHEVPDWVYSALNKDEKVK--AFDSGSVSGKRKRKEVVYADTLSDLQ 953
RR KENYR+RLM+E EVP+W Y+ ++EK+ F GSV+GKRKRKE+VY+DTLS+LQ
Sbjct: 922 RRRKENYRARLMQEQEVPEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYSDTLSELQ 981
Query: 954 WMKAVESAQDMPKLSVKRKRRD---SDAQASDDIGAEERLLELRNGSERSSEDTFNVTPA 1010
W+KAVES +D+ KLS++ RR+ S+ + S E + + +G+ E+ A
Sbjct: 982 WLKAVESGEDLSKLSMRYNRREENASNTKTSTSKKVIESIQTVSDGTSEEDEEEQEEERA 1041
Query: 1011 SKRPKHEELNSQNHENEDVRVGGLNENVFSWNTKKKKRSSY 1051
+ + ++ E E+ + +F WNT KKKRS Y
Sbjct: 1042 KEMSGKQRVDKSEEEEEEGEEENDGKAIFKWNTHKKKRSRY 1082
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 1318 bits (3410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/1078 (63%), Positives = 820/1078 (76%), Gaps = 40/1078 (3%)
Query: 4 QALIGALNLISRNLPLPPDLFTTVSSIYHRXXXXXXXXXXXXXXXXXXXXXXXXXXDLLA 63
++LI ALN +SR+L LP L+ +VSSIYH DL++
Sbjct: 18 KSLISALNYLSRDLLLPSHLYASVSSIYH-----ASVSDLSPSPPLRGNSYTPNRGDLMS 72
Query: 64 DLQDALSNHRAS--SASKLDQATETRYQTLIQHRLTQLQELPSTRGDNLQTTCLLEFYGL 121
+ +DAL R + S S+L + ETRY+ I +RL+QL+ LPS RG++LQ CLLE YGL
Sbjct: 73 EFEDALLQQRLNYESGSRLAELKETRYKNRIHNRLSQLEGLPSNRGEDLQEKCLLELYGL 132
Query: 122 KLAELQRKVRTDVSSEYWLRVQCACPDKQLYDWGMMRLRRPPYGVGDPFAMDADDQIRKK 181
KL ELQ +VR +VS+EYWLR+ CA P++QLYDWGMMRL R YGVGD F M+ADDQ R K
Sbjct: 133 KLQELQCRVRGEVSAEYWLRLNCADPERQLYDWGMMRLPRRMYGVGDSFVMEADDQFRNK 192
Query: 182 RDAERLSRLEEQTKNHIETRKRRFFAEILNAVREFQLQIQASLKRRKQRNDGVQAWHGRQ 241
RDAERL RLEE+ KN IET +R+FFAE+LNAVREFQLQIQAS +R KQRNDGVQAWHG+Q
Sbjct: 193 RDAERLLRLEEEEKNLIETTQRKFFAEVLNAVREFQLQIQASHRRCKQRNDGVQAWHGKQ 252
Query: 242 RQRATRAEKLRFQALKSDDQEAYMRMVKESXXXXXXXXXXXXXXXXXXXGAAVQRQRDSK 301
RQRATRAEKLR ALKSDDQE YM++ KES GAAVQRQ+D+K
Sbjct: 253 RQRATRAEKLRIMALKSDDQEEYMKLAKESKNEKLTLFLEETNKIFVSLGAAVQRQKDAK 312
Query: 302 KSDGIXXXXXXXXXXXXXXXXKNKDSPLD----EDVDLIDSDYNGDTSDLLEGQRQYNSA 357
S+ + D+P D +D+++IDSD N D++DLLEG+RQ+N A
Sbjct: 313 LSENTKLLKGSESDLS------DVDAPEDVLPAQDIEIIDSDNNDDSNDLLEGERQFNLA 366
Query: 358 IHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIA 417
IHSIQEKVT+QPS+LQGGELRSYQ+EGLQWM+SL+NN+ NGILADEMGLGKTIQTI+LIA
Sbjct: 367 IHSIQEKVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIA 426
Query: 418 HLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKF 477
+L+E K + GPHLI+APKAVLPNW NEF+ WAPSI LYDG ++R ++ ++G GKF
Sbjct: 427 YLLESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAG-GKF 485
Query: 478 NVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTP 537
NVL+THYDLIMRDKAFLKKI W Y+IVDEGHRLKNHECALA+TL + Y I+RRLLLTGTP
Sbjct: 486 NVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTP 545
Query: 538 IQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRP 597
IQNSLQELWSLLNFLLP IFNS+HNFE+WFN PFA+ SLTDEE+LLII RLH VIRP
Sbjct: 546 IQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRP 605
Query: 598 FILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTM 657
F+LRRKK+EVEKFLPGK+QVILKCDMSAWQK+YY+QVTDVGRVGL +G+GKSKSLQNLTM
Sbjct: 606 FLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTM 665
Query: 658 QLRKCCNHPYLFVG-DYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLM 716
QLRKCCNHPYLFVG DY+M + K EI+RASGKFELLDRLLPKL++AGHR+LLFSQMTRL+
Sbjct: 666 QLRKCCNHPYLFVGADYNMCK-KPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLI 724
Query: 717 DILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTAD 776
D+LEIYL L+DY +LRLDGSTKT++RG LL++FN PDSPYFMFLLSTRAGGLGLNLQTAD
Sbjct: 725 DLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTAD 784
Query: 777 TVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
T+IIFDSDWNPQMDQQAEDRAHRIGQKK RAKQKMGIDAKVI
Sbjct: 785 TIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVI 844
Query: 837 QAGLFNTTSTAQDRREMLEVIMRRGTSSLGTDVPSEREINRLAARSDEEFWLFERMDEER 896
QAGLFNTTSTAQDRREMLE IM +GTSSLG DVPSEREINRLAAR++EEFW+FE+MDEER
Sbjct: 845 QAGLFNTTSTAQDRREMLEEIMSKGTSSLGEDVPSEREINRLAARTEEEFWMFEQMDEER 904
Query: 897 RLKENYRSRLMEEHEVPDWVYSALNKDEKVKAFDS-GSVSGKRKRKEVVYADTLSDLQWM 955
R KENY++RLMEE EVP+W Y++ +++K A + GS++GKRKRKE VY+D+LSDLQWM
Sbjct: 905 RKKENYKTRLMEEKEVPEWAYTSETQEDKTNAKNHFGSLTGKRKRKEAVYSDSLSDLQWM 964
Query: 956 KAVESA-QDMPKLSVKRKRRDSDAQASDDIGAEERLLELRNGSERSSEDTFNVTPASKRP 1014
KA+ES +D K+S KRKR D+ + S NGS+ + V S
Sbjct: 965 KAMESEDEDASKVSQKRKRTDTKTRMS-------------NGSKAEA-----VLSESDEE 1006
Query: 1015 KHEELNSQNHENEDVRVGGLNENVFSWNTKKKKRSSYLSQGSLSDTKGQNSNGRANRN 1072
K EE + E+ + + SW T KKKRS Y S +++G+ S+ + RN
Sbjct: 1007 KEEEEEERKEESGKESEEENEKPLHSWKTNKKKRSRYPVMTSSPNSRGKGSSKGSKRN 1064
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/771 (40%), Positives = 447/771 (57%), Gaps = 58/771 (7%)
Query: 164 YGVGDPFAMDAD--DQIRKKRDAERLSRLE---EQTKNHIETRKRRFFAEILNAVREFQL 218
Y P A D + +K + R+ +LE ++ K + R R E + +
Sbjct: 540 YNFFKPIATDVEHLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKE 599
Query: 219 QIQASLKRRKQRNDG----VQAWHGRQ----RQRATRAEKLRFQALKSDDQEAYMRMVKE 270
+++ K R++R G + +H R+ R++ + ++ + LK +D E Y+RMV++
Sbjct: 600 KLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQD 659
Query: 271 SXXXXXXXXXXXXXXXXXXXGAAVQRQRDSKKSDGIXXXXXXXXXXXXXXXXKNKDSPLD 330
+ G+ ++ + + + S
Sbjct: 660 AKSDRVKQLLKETEKYLQKLGSKLKEAK-------------LLTSRFENEADETRTSNAT 706
Query: 331 EDVDLIDSDYNGDTSD-LLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWML 389
+D LI+++ D + LE +Y HSI+E + EQPS L GG+LR YQ+ GL+W++
Sbjct: 707 DDETLIENEDESDQAKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLV 766
Query: 390 SLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWA 449
SL+NN+LNGILADEMGLGKT+Q ISLI +LME K GP L+V P +VLP W +E + WA
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 450 PSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLIM--RDKAFLKKIHWLYLIVDEG 507
PSI I+Y G DER+ + +E KFNVLLT Y+ +M D+ L KIHW Y+I+DEG
Sbjct: 827 PSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEG 886
Query: 508 HRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWF 567
HR+KN C L L Y RLLLTGTP+QN+L+ELW+LLNFLLP+IFNS +F WF
Sbjct: 887 HRIKNASCKLNADL-KHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 945
Query: 568 NAPFADR-----VDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCD 622
N PF + L++EE LLII RLHQV+RPF+LRR K++VE LP K + +++C+
Sbjct: 946 NKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCE 1005
Query: 623 MSAWQKVYYQQVTD-VGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYRHKEE 681
SA+QK+ ++V D +G +G A KS+++ N M+LR CNHPYL H EE
Sbjct: 1006 ASAYQKLLMKRVEDNLGSIGNA----KSRAVHNSVMELRNICNHPYL------SQLHSEE 1055
Query: 682 ------------IIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYK 729
I+R GK E+LDR+LPKL+ HRVL FS MTRL+D++E YL L YK
Sbjct: 1056 VNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYK 1115
Query: 730 FLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQM 789
+LRLDG T +RG+L+ FN SP+F+FLLS RAGG+G+NLQ ADTVI+FD+DWNPQ+
Sbjct: 1116 YLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQV 1175
Query: 790 DQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTSTAQD 849
D QA+ RAHRIGQKK A+ K+G+ + I AG F+ ++A+D
Sbjct: 1176 DLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAED 1235
Query: 850 RREMLEVIMRRGTSSLGTDVPSEREINRLAARSDEEFWLFERMDEERRLKE 900
R+E LE ++R V + +N L AR + E +FE +D++R+ E
Sbjct: 1236 RKEYLESLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENE 1286
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/771 (40%), Positives = 447/771 (57%), Gaps = 58/771 (7%)
Query: 164 YGVGDPFAMDAD--DQIRKKRDAERLSRLE---EQTKNHIETRKRRFFAEILNAVREFQL 218
Y P A D + +K + R+ +LE ++ K + R R E + +
Sbjct: 540 YNFFKPIATDVEHLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKE 599
Query: 219 QIQASLKRRKQRNDG----VQAWHGRQ----RQRATRAEKLRFQALKSDDQEAYMRMVKE 270
+++ K R++R G + +H R+ R++ + ++ + LK +D E Y+RMV++
Sbjct: 600 KLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQD 659
Query: 271 SXXXXXXXXXXXXXXXXXXXGAAVQRQRDSKKSDGIXXXXXXXXXXXXXXXXKNKDSPLD 330
+ G+ ++ + + + S
Sbjct: 660 AKSDRVKQLLKETEKYLQKLGSKLKEAK-------------LLTSRFENEADETRTSNAT 706
Query: 331 EDVDLIDSDYNGDTSD-LLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWML 389
+D LI+++ D + LE +Y HSI+E + EQPS L GG+LR YQ+ GL+W++
Sbjct: 707 DDETLIENEDESDQAKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLV 766
Query: 390 SLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWA 449
SL+NN+LNGILADEMGLGKT+Q ISLI +LME K GP L+V P +VLP W +E + WA
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 450 PSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLIM--RDKAFLKKIHWLYLIVDEG 507
PSI I+Y G DER+ + +E KFNVLLT Y+ +M D+ L KIHW Y+I+DEG
Sbjct: 827 PSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEG 886
Query: 508 HRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWF 567
HR+KN C L L Y RLLLTGTP+QN+L+ELW+LLNFLLP+IFNS +F WF
Sbjct: 887 HRIKNASCKLNADL-KHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 945
Query: 568 NAPFADR-----VDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCD 622
N PF + L++EE LLII RLHQV+RPF+LRR K++VE LP K + +++C+
Sbjct: 946 NKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCE 1005
Query: 623 MSAWQKVYYQQVTD-VGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYRHKEE 681
SA+QK+ ++V D +G +G A KS+++ N M+LR CNHPYL H EE
Sbjct: 1006 ASAYQKLLMKRVEDNLGSIGNA----KSRAVHNSVMELRNICNHPYL------SQLHSEE 1055
Query: 682 ------------IIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYK 729
I+R GK E+LDR+LPKL+ HRVL FS MTRL+D++E YL L YK
Sbjct: 1056 VNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYK 1115
Query: 730 FLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQM 789
+LRLDG T +RG+L+ FN SP+F+FLLS RAGG+G+NLQ ADTVI+FD+DWNPQ+
Sbjct: 1116 YLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQV 1175
Query: 790 DQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTSTAQD 849
D QA+ RAHRIGQKK A+ K+G+ + I AG F+ ++A+D
Sbjct: 1176 DLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAED 1235
Query: 850 RREMLEVIMRRGTSSLGTDVPSEREINRLAARSDEEFWLFERMDEERRLKE 900
R+E LE ++R V + +N L AR + E +FE +D++R+ E
Sbjct: 1236 RKEYLESLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENE 1286
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/771 (40%), Positives = 447/771 (57%), Gaps = 58/771 (7%)
Query: 164 YGVGDPFAMDAD--DQIRKKRDAERLSRLE---EQTKNHIETRKRRFFAEILNAVREFQL 218
Y P A D + +K + R+ +LE ++ K + R R E + +
Sbjct: 540 YNFFKPIATDVEHLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKE 599
Query: 219 QIQASLKRRKQRNDG----VQAWHGRQ----RQRATRAEKLRFQALKSDDQEAYMRMVKE 270
+++ K R++R G + +H R+ R++ + ++ + LK +D E Y+RMV++
Sbjct: 600 KLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQD 659
Query: 271 SXXXXXXXXXXXXXXXXXXXGAAVQRQRDSKKSDGIXXXXXXXXXXXXXXXXKNKDSPLD 330
+ G+ ++ + + + S
Sbjct: 660 AKSDRVKQLLKETEKYLQKLGSKLKEAK-------------LLTSRFENEADETRTSNAT 706
Query: 331 EDVDLIDSDYNGDTSD-LLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWML 389
+D LI+++ D + LE +Y HSI+E + EQPS L GG+LR YQ+ GL+W++
Sbjct: 707 DDETLIENEDESDQAKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLV 766
Query: 390 SLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWA 449
SL+NN+LNGILADEMGLGKT+Q ISLI +LME K GP L+V P +VLP W +E + WA
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 450 PSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLIM--RDKAFLKKIHWLYLIVDEG 507
PSI I+Y G DER+ + +E KFNVLLT Y+ +M D+ L KIHW Y+I+DEG
Sbjct: 827 PSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEG 886
Query: 508 HRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWF 567
HR+KN C L L Y RLLLTGTP+QN+L+ELW+LLNFLLP+IFNS +F WF
Sbjct: 887 HRIKNASCKLNADL-KHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 945
Query: 568 NAPFADR-----VDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCD 622
N PF + L++EE LLII RLHQV+RPF+LRR K++VE LP K + +++C+
Sbjct: 946 NKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCE 1005
Query: 623 MSAWQKVYYQQVTD-VGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYRHKEE 681
SA+QK+ ++V D +G +G A KS+++ N M+LR CNHPYL H EE
Sbjct: 1006 ASAYQKLLMKRVEDNLGSIGNA----KSRAVHNSVMELRNICNHPYL------SQLHSEE 1055
Query: 682 ------------IIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYK 729
I+R GK E+LDR+LPKL+ HRVL FS MTRL+D++E YL L YK
Sbjct: 1056 VNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYK 1115
Query: 730 FLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQM 789
+LRLDG T +RG+L+ FN SP+F+FLLS RAGG+G+NLQ ADTVI+FD+DWNPQ+
Sbjct: 1116 YLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQV 1175
Query: 790 DQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTSTAQD 849
D QA+ RAHRIGQKK A+ K+G+ + I AG F+ ++A+D
Sbjct: 1176 DLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAED 1235
Query: 850 RREMLEVIMRRGTSSLGTDVPSEREINRLAARSDEEFWLFERMDEERRLKE 900
R+E LE ++R V + +N L AR + E +FE +D++R+ E
Sbjct: 1236 RKEYLESLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENE 1286
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/625 (44%), Positives = 370/625 (59%), Gaps = 69/625 (11%)
Query: 353 QYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQT 412
+Y + H++ E V QPS+LQ G LR YQ+ GLQWMLSL+NN LNGILADEMGLGKT+Q
Sbjct: 957 KYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1016
Query: 413 ISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELS 472
++LIA+LME+KG GPHLI+ P AVL NW +E TW PS+ I Y G D+R + ++
Sbjct: 1017 MALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVK 1076
Query: 473 GEGKFNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLL 532
E KFNVL+T Y+ IM D++ L K+ W Y+I+DE R+K+ E LAR LD Y QRRLL
Sbjct: 1077 FE-KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLL 1134
Query: 533 LTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPF-----ADRV-DVSLTDEEQLL 586
LTGTP+QN L+ELWSLLN LLP +F++ F DWF PF A + D L E++++
Sbjct: 1135 LTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVI 1194
Query: 587 IIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGS 646
+I RLHQ++ PF+LRR+ +VE LP K V+L+C MSA Q Y + G + +
Sbjct: 1195 VIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDD 1254
Query: 647 GK-------------SKSLQNLTMQLRKCCNHP---YLFVGDYDMYRHKEEIIRASGKFE 690
K ++L N M+LRK CNHP Y + D+ K+ ++R+ GK
Sbjct: 1255 EKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFS----KDFLVRSCGKLW 1310
Query: 691 LLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFN 750
+LDR+L KL+R GHRVLLFS MT+L+DILE YL+ + R+DG+T E+R S + FN
Sbjct: 1311 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFN 1370
Query: 751 APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXX 810
PD+ F+FLLS RA G GLNLQTADTV+I+D D NP+ ++QA RAHRIGQ +
Sbjct: 1371 DPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIY 1430
Query: 811 XXXXXXXXXXXXXRAKQKMG-------------------------------IDA--KVIQ 837
+ + G ID +VI
Sbjct: 1431 MEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVIN 1490
Query: 838 AGLFNTTSTAQDRREMLEVIMRRGTSSLGT--DVPSEREINRLAARSDEEFWLFERMDEE 895
AG F+ +T ++RR LE ++ T DVPS E+NR+ ARS+EE LF++MDEE
Sbjct: 1491 AGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEE 1550
Query: 896 RRLKENYRSRLMEEHE-VPDWVYSA 919
E M HE VP W+ ++
Sbjct: 1551 FDWTEE-----MTNHEQVPKWLRAS 1570
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 275/625 (44%), Positives = 368/625 (58%), Gaps = 68/625 (10%)
Query: 353 QYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQT 412
+Y + H++ E V QPS+LQ G LR YQ+ GLQWMLSL+NN LNGILADEMGLGKT+Q
Sbjct: 957 KYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1016
Query: 413 ISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELS 472
++LIA+LME+KG GPHLI+ P AVL NW +E TW PS+ I Y G D+R + +
Sbjct: 1017 MALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEV 1076
Query: 473 GEGKFNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLL 532
KFNVL+T Y+ IM D++ L K+ W Y+I+DE R+K+ E LAR LD Y QRRLL
Sbjct: 1077 CAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLL 1135
Query: 533 LTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPF-----ADRV-DVSLTDEEQLL 586
LTGTP+QN L+ELWSLLN LLP +F++ F DWF PF A + D L E++++
Sbjct: 1136 LTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVI 1195
Query: 587 IIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGS 646
+I RLHQ++ PF+LRR+ +VE LP K V+L+C MSA Q Y + G + +
Sbjct: 1196 VIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDD 1255
Query: 647 GK-------------SKSLQNLTMQLRKCCNHP---YLFVGDYDMYRHKEEIIRASGKFE 690
K ++L N M+LRK CNHP Y + D+ K+ ++R+ GK
Sbjct: 1256 EKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFS----KDFLVRSCGKLW 1311
Query: 691 LLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFN 750
+LDR+L KL+R GHRVLLFS MT+L+DILE YL+ + R+DG+T E+R S + FN
Sbjct: 1312 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFN 1371
Query: 751 APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXX 810
PD+ F+FLLS RA G GLNLQTADTV+I+D D NP+ ++QA RAHRIGQ +
Sbjct: 1372 DPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIY 1431
Query: 811 XXXXXXXXXXXXXRAKQKMG-------------------------------IDA--KVIQ 837
+ + G ID +VI
Sbjct: 1432 MEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVIN 1491
Query: 838 AGLFNTTSTAQDRREMLEVIMRRGTSSLGT--DVPSEREINRLAARSDEEFWLFERMDEE 895
AG F+ +T ++RR LE ++ T DVPS E+NR+ ARS+EE LF++MDEE
Sbjct: 1492 AGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEE 1551
Query: 896 RRLKENYRSRLMEEHE-VPDWVYSA 919
E M HE VP W+ ++
Sbjct: 1552 FDWTEE-----MTNHEQVPKWLRAS 1571
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/523 (45%), Positives = 348/523 (66%), Gaps = 21/523 (4%)
Query: 368 QPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTG 427
QP+ +QG +LR YQ+ GL W++ L+ N +NGILADEMGLGKT+QTISL+A+L EY+G+ G
Sbjct: 186 QPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING 244
Query: 428 PHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
PH++VAPK+ L NWMNE + P ++ + + G +ER+ ++EEL GKF++ +T +++
Sbjct: 245 PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMA 304
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
+++K L++ W Y+I+DE HR+KN L++T+ + RLL+TGTP+QN+L ELW+
Sbjct: 305 IKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLHELWA 363
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEV 607
LLNFLLP +F+S F++WF + +Q ++++LH+V+RPF+LRR K++V
Sbjct: 364 LLNFLLPEVFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRLKSDV 414
Query: 608 EKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPY 667
EK LP K + ILK MS QK YY+ + + + G G+ K L N+ MQLRKCCNHPY
Sbjct: 415 EKGLPPKKETILKVGMSQMQKQYYKALLQKD-LEVVNGGGERKRLLNIAMQLRKCCNHPY 473
Query: 668 LFVG--DYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRL 725
LF G Y + ++ +GK LLD+LLPKL+ RVL+FSQMTRL+DILE YL
Sbjct: 474 LFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMY 533
Query: 726 HDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW 785
Y++ R+DG+T +ER + ++ +N P S F+FLLSTRAGGLG+NL TAD VI++DSDW
Sbjct: 534 RGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDW 593
Query: 786 NPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTS 845
NPQ+D QA+DRAHRIGQKK RA +K+ +DA VIQ G
Sbjct: 594 NPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQK 653
Query: 846 TAQDRREMLEVIMRRGT----SSLGTDVPSEREINRLAARSDE 884
T ++ E+L+++ R G SS + + E +I+R+ A+ +E
Sbjct: 654 TV-NKDELLQMV-RYGAEMVFSSKDSTITDE-DIDRIIAKGEE 693
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/523 (45%), Positives = 348/523 (66%), Gaps = 21/523 (4%)
Query: 368 QPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTG 427
QP+ +QG +LR YQ+ GL W++ L+ N +NGILADEMGLGKT+QTISL+A+L EY+G+ G
Sbjct: 186 QPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING 244
Query: 428 PHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
PH++VAPK+ L NWMNE + P ++ + + G +ER+ ++EEL GKF++ +T +++
Sbjct: 245 PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMA 304
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
+++K L++ W Y+I+DE HR+KN L++T+ + RLL+TGTP+QN+L ELW+
Sbjct: 305 IKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLHELWA 363
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEV 607
LLNFLLP +F+S F++WF + +Q ++++LH+V+RPF+LRR K++V
Sbjct: 364 LLNFLLPEVFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRLKSDV 414
Query: 608 EKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPY 667
EK LP K + ILK MS QK YY+ + + + G G+ K L N+ MQLRKCCNHPY
Sbjct: 415 EKGLPPKKETILKVGMSQMQKQYYKALLQKD-LEVVNGGGERKRLLNIAMQLRKCCNHPY 473
Query: 668 LFVG--DYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRL 725
LF G Y + ++ +GK LLD+LLPKL+ RVL+FSQMTRL+DILE YL
Sbjct: 474 LFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMY 533
Query: 726 HDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW 785
Y++ R+DG+T +ER + ++ +N P S F+FLLSTRAGGLG+NL TAD VI++DSDW
Sbjct: 534 RGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDW 593
Query: 786 NPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTS 845
NPQ+D QA+DRAHRIGQKK RA +K+ +DA VIQ G
Sbjct: 594 NPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQK 653
Query: 846 TAQDRREMLEVIMRRGT----SSLGTDVPSEREINRLAARSDE 884
T ++ E+L+++ R G SS + + E +I+R+ A+ +E
Sbjct: 654 TV-NKDELLQMV-RYGAEMVFSSKDSTITDE-DIDRIIAKGEE 693
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/523 (46%), Positives = 346/523 (66%), Gaps = 21/523 (4%)
Query: 368 QPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTG 427
QPS +QG ++R YQ+ GL W++ L+ N +NGILADEMGLGKT+QTISL+A+L EY+G+ G
Sbjct: 181 QPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING 239
Query: 428 PHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
PH++VAPK+ L NWMNE + P ++ + + G +ER+ ++E+L GKF++ +T +++
Sbjct: 240 PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMA 299
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
+++K L++ W Y+I+DE HR+KN L++T+ + RLL+TGTP+QN+L ELW+
Sbjct: 300 IKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLHELWA 358
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEV 607
LLNFLLP IF+S F++WF + +Q ++++LH+V+RPF+LRR K++V
Sbjct: 359 LLNFLLPEIFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRLKSDV 409
Query: 608 EKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPY 667
EK LP K + ILK MS QK YY+ + + G G+ K L N+ MQLRKCCNHPY
Sbjct: 410 EKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG-GERKRLLNIAMQLRKCCNHPY 468
Query: 668 LFVG--DYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRL 725
LF G Y + +I +GK LLD+LLPKL+ RVL+FSQMTRL+DILE YL
Sbjct: 469 LFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMY 528
Query: 726 HDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW 785
Y + R+DG+T +ER + ++ +N P S F+FLLSTRAGGLG+NL TAD VI++DSDW
Sbjct: 529 RGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDW 588
Query: 786 NPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTS 845
NPQ+D QA+DRAHRIGQKK RA +K+ +DA VIQ G
Sbjct: 589 NPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQK 648
Query: 846 TAQDRREMLEVIMRRGT----SSLGTDVPSEREINRLAARSDE 884
T ++ E+L+++ R G SS + + E +I+R+ A+ +E
Sbjct: 649 TV-NKDELLQMV-RYGAEMVFSSKDSTITDE-DIDRIIAKGEE 688
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/523 (46%), Positives = 346/523 (66%), Gaps = 21/523 (4%)
Query: 368 QPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTG 427
QPS +QG ++R YQ+ GL W++ L+ N +NGILADEMGLGKT+QTISL+A+L EY+G+ G
Sbjct: 181 QPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING 239
Query: 428 PHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
PH++VAPK+ L NWMNE + P ++ + + G +ER+ ++E+L GKF++ +T +++
Sbjct: 240 PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMA 299
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
+++K L++ W Y+I+DE HR+KN L++T+ + RLL+TGTP+QN+L ELW+
Sbjct: 300 IKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLHELWA 358
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEV 607
LLNFLLP IF+S F++WF + +Q ++++LH+V+RPF+LRR K++V
Sbjct: 359 LLNFLLPEIFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRLKSDV 409
Query: 608 EKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPY 667
EK LP K + ILK MS QK YY+ + + G G+ K L N+ MQLRKCCNHPY
Sbjct: 410 EKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG-GERKRLLNIAMQLRKCCNHPY 468
Query: 668 LFVG--DYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRL 725
LF G Y + +I +GK LLD+LLPKL+ RVL+FSQMTRL+DILE YL
Sbjct: 469 LFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMY 528
Query: 726 HDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW 785
Y + R+DG+T +ER + ++ +N P S F+FLLSTRAGGLG+NL TAD VI++DSDW
Sbjct: 529 RGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDW 588
Query: 786 NPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTS 845
NPQ+D QA+DRAHRIGQKK RA +K+ +DA VIQ G
Sbjct: 589 NPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQK 648
Query: 846 TAQDRREMLEVIMRRGT----SSLGTDVPSEREINRLAARSDE 884
T ++ E+L+++ R G SS + + E +I+R+ A+ +E
Sbjct: 649 TV-NKDELLQMV-RYGAEMVFSSKDSTITDE-DIDRIIAKGEE 688
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/523 (46%), Positives = 346/523 (66%), Gaps = 21/523 (4%)
Query: 368 QPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTG 427
QPS +QG ++R YQ+ GL W++ L+ N +NGILADEMGLGKT+QTISL+A+L EY+G+ G
Sbjct: 181 QPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING 239
Query: 428 PHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
PH++VAPK+ L NWMNE + P ++ + + G +ER+ ++E+L GKF++ +T +++
Sbjct: 240 PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMA 299
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
+++K L++ W Y+I+DE HR+KN L++T+ + RLL+TGTP+QN+L ELW+
Sbjct: 300 IKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLHELWA 358
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEV 607
LLNFLLP IF+S F++WF + +Q ++++LH+V+RPF+LRR K++V
Sbjct: 359 LLNFLLPEIFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRLKSDV 409
Query: 608 EKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPY 667
EK LP K + ILK MS QK YY+ + + G G+ K L N+ MQLRKCCNHPY
Sbjct: 410 EKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG-GERKRLLNIAMQLRKCCNHPY 468
Query: 668 LFVGDY--DMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRL 725
LF G Y + +I +GK LLD+LLPKL+ RVL+FSQMTRL+DILE YL
Sbjct: 469 LFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMY 528
Query: 726 HDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW 785
Y + R+DG+T +ER + ++ +N P S F+FLLSTRAGGLG+NL TAD VI++DSDW
Sbjct: 529 RGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDW 588
Query: 786 NPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNTTS 845
NPQ+D QA+DRAHRIGQKK RA +K+ +DA VIQ G
Sbjct: 589 NPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQK 648
Query: 846 TAQDRREMLEVIMRRGT----SSLGTDVPSEREINRLAARSDE 884
T ++ E+L+++ R G SS + + E +I+R+ A+ +E
Sbjct: 649 TV-NKDELLQMV-RYGAEMVFSSKDSTITDE-DIDRIIAKGEE 688
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 301/489 (61%), Gaps = 26/489 (5%)
Query: 364 KVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYK 423
K+ EQP L GG LR YQ+EGL ++++ + N+ N ILADEMGLGKT+Q++S++ L +
Sbjct: 612 KLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQ 671
Query: 424 GVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKE-ELSGEGK------ 476
+ GP L+V P + L NW EF W P + I+Y G R+ ++ E E K
Sbjct: 672 QIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIK 731
Query: 477 FNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGT 536
FN LLT Y+++++DKA L KI W+YL+VDE HRLKN E L L + + +LL+TGT
Sbjct: 732 FNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTAL-LEFSTKNKLLITGT 790
Query: 537 PIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIR 596
P+QNS++ELW+LL+FL P F + F + + ++S +E +L LH +R
Sbjct: 791 PLQNSVEELWALLHFLDPGKFKNKDEFVENYK-------NLSSFNESELA---NLHLELR 840
Query: 597 PFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATG-SGKSKSLQNL 655
P ILRR +VEK LP K + IL+ +MS QK YY+ + + L G G SL N+
Sbjct: 841 PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNI 900
Query: 656 TMQLRKCCNHPYLFV-------GDYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLL 708
++L+KCCNHP+LF GD + ++II +SGK +LD+LL +LR HRVL+
Sbjct: 901 VVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLI 960
Query: 709 FSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGL 768
FSQM R++DIL YL L ++F RLDGSTK E R + FNAP S F FLLSTRAGGL
Sbjct: 961 FSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGL 1020
Query: 769 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQK 828
G+NL TADTV+IFDSDWNPQ D QA RAHRIGQ++ RAK+K
Sbjct: 1021 GINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRK 1080
Query: 829 MGIDAKVIQ 837
M +D VIQ
Sbjct: 1081 MVLDHLVIQ 1089
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/535 (42%), Positives = 330/535 (61%), Gaps = 26/535 (4%)
Query: 371 ILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPHL 430
+L GG+L+SYQ++G++W++SL+ N LNGILAD+MGLGKTIQTI ++HL + G+ GP+L
Sbjct: 196 LLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL-KGNGLDGPYL 254
Query: 431 IVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEG---KFNVLLTHYDLI 487
++AP + L NW NE + + PSI I+Y G ++R ++ + + KF +++T Y++
Sbjct: 255 VIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVA 314
Query: 488 MRD-KAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELW 546
M D K L+ W Y+++DEGHRLKNH+C L R L + +LLLTGTP+QN+L ELW
Sbjct: 315 MNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLREL-KHLKMDNKLLLTGTPLQNNLSELW 373
Query: 547 SLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQ--LLIIRRLHQVIRPFILRRKK 604
SLLNF+LP IF S FE WF+ ++ + + +EE+ ++ +LH ++RPFILRR K
Sbjct: 374 SLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMK 433
Query: 605 NEVEKFLPGKSQVILKCDMSAWQKVYYQQVTD------VGRVGLATGSGKSKSLQNLTMQ 658
+VE LP K ++I+ M+ QK + + + + +G + G G L NL +Q
Sbjct: 434 CDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAI-RGQGWKGKLNNLVIQ 492
Query: 659 LRKCCNHPYLFVGDYD---MYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRL 715
LRK CNHP L G D +Y EEI+ GKF LL+RLL +L H+VL+FSQ T+L
Sbjct: 493 LRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKL 552
Query: 716 MDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTA 775
+DI++ Y ++ R+DGS K +ER ++ F+ S +FLLSTRAGGLG+NL A
Sbjct: 553 LDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAA 612
Query: 776 DTVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKV 835
DT I++DSDWNPQMD QA DR HRIGQ K RA K+ ++ V
Sbjct: 613 DTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVV 672
Query: 836 IQAGLFN----TTSTAQDRREMLEVIMRRGTSS---LGTDVPSEREINRLAARSD 883
I G F+ +ST + ++L ++ T+ + TD+ S+ +++RL RSD
Sbjct: 673 IGQGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDI-SDADLDRLLDRSD 726
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 353 bits (907), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/524 (39%), Positives = 297/524 (56%), Gaps = 48/524 (9%)
Query: 369 PSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGP 428
P L+G L YQ+EGL ++ ++ + ILADEMGLGKTIQ+I+L+A L E + P
Sbjct: 266 PEFLKG-LLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--P 322
Query: 429 HLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKE------------------E 470
HL++AP + L NW EF+TWAP + ++Y G R ++E +
Sbjct: 323 HLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQ 382
Query: 471 LSGEGK-----FNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSY 525
+S E K F+VLLT Y++I D A LK I W +IVDEGHRLKN + L +L + Y
Sbjct: 383 ISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSL-TQY 441
Query: 526 HIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQL 585
R+LLTGTP+QN+L EL+ L++FL F S+ F++ F + EEQ
Sbjct: 442 SSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---------DINQEEQ- 491
Query: 586 LIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATG 645
I RLH+++ P +LRR K +V K +P K ++IL+ D+S+ QK YY+ + L
Sbjct: 492 --ISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKK 549
Query: 646 SGKSKSLQNLTMQLRKCCNHPYLFVGD----YDMYRHKEEIIRASGKFELLDRLLPKLRR 701
G SL N+ M+LRK C HPY+ G +D ++++ + GK +LLD+++ KL+
Sbjct: 550 GGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKE 609
Query: 702 AGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLL 761
GHRVL+++Q ++D+LE Y +++ R+DG ER + +FNA +S F FLL
Sbjct: 610 QGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLL 669
Query: 762 STRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXX 821
STRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQ
Sbjct: 670 STRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERM 729
Query: 822 XXRAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEVIMRRGTSSL 865
K+KM ++ V+ G T + Q E L+ I+R G+ L
Sbjct: 730 MQLTKKKMVLEHLVV--GKLKTQNINQ---EELDDIIRYGSKEL 768
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 339 bits (869), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 301/512 (58%), Gaps = 26/512 (5%)
Query: 345 SDLLEGQRQYNSAIHSIQEKVTE----QPSILQGG---ELRSYQIEGLQWMLSLFNNNLN 397
S +E +R+ +A I EK + P + G L+ +Q+EG+ W++ + +N
Sbjct: 12 STTMEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVN 71
Query: 398 GILA-DEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTIL 456
+L D+MGLGKT+Q IS +++L +G+ GP L++ P +V W++E + + P+++ +
Sbjct: 72 VVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLR 131
Query: 457 YDG----RMDERKAMKEELSGEGKFNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKN 512
Y G R+D RK+M + F+VLLT YD+ + D+ FL +I W Y I+DE RLKN
Sbjct: 132 YVGDKYCRLDMRKSMYDH-GHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKN 190
Query: 513 HECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFA 572
L L + I RRLL+TGTPIQN+L ELW+L++F +P +F ++ F F
Sbjct: 191 PNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKET-G 249
Query: 573 DRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK----FLPGKSQVILKCDMSAWQK 628
D +DVS D+E + L ++ F+LRR K+ + + LP +++ + + + QK
Sbjct: 250 DGLDVS-NDKETY---KSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQK 305
Query: 629 VYYQQVTD---VGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVG-DYDMYRHKEEIIR 684
Y + G + L++G SLQN+ +QLRK C+HPYLF G + + + E +++
Sbjct: 306 KIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQ 365
Query: 685 ASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGS 744
ASGK +LD+LL +L +GHRVLLFSQMT +DIL+ ++ L Y + RLDGS + EER +
Sbjct: 366 ASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFA 425
Query: 745 LLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
++ F+ S F+F++STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ
Sbjct: 426 AIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQIS 485
Query: 805 XXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
RA++K+ + V+
Sbjct: 486 HVLSINLVTEHSVEEVILRRAERKLQLSHNVV 517
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 333 bits (853), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 207/528 (39%), Positives = 302/528 (57%), Gaps = 43/528 (8%)
Query: 365 VTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKG 424
+TEQP L+GG L ++Q+E L W+ ++ + N ILADEMGLGKT+ + ++ L G
Sbjct: 677 LTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFG 736
Query: 425 VTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKE------------ELS 472
V P L++ P + +PNW++EFS WAP + + Y G R +++ +
Sbjct: 737 VARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKP 796
Query: 473 GEGKFNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLL 532
KFNVLLT Y++++ D + L+ + W L+VDEGHRLKN E L L+ ++ Q R+L
Sbjct: 797 TSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLN-TFSFQHRVL 855
Query: 533 LTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLH 592
LTGTP+QN++ E+++LLNFL PS F S+ +FE+ F+ LT E+ + L
Sbjct: 856 LTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFH---------DLTSAEK---VEELK 903
Query: 593 QVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQ-QVTDVGRVGLATGSGKS-K 650
+++ P +LRR K + + +P K++ ++ ++++ Q YY+ +T ++ G G + +
Sbjct: 904 KLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQ 963
Query: 651 SLQNLTMQLRKCCNHPYLFVGDYDMYRHKEEI----IRASGKFELLDRLLPKLRRAGHRV 706
S+ N+ MQLRK CNHPYL G E + I+AS K LL +L L + GHRV
Sbjct: 964 SMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRV 1023
Query: 707 LLFSQMTRLMDILEIYLRLH--DYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTR 764
L+FSQMT+L+DILE YL + F R+DGS +R + + +FN D F+FLLSTR
Sbjct: 1024 LIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQ-DKNRFVFLLSTR 1082
Query: 765 AGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXR 824
A GLG+NL TADTVII+DSD+NP D QA +RAHRIGQ K
Sbjct: 1083 ACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL 1142
Query: 825 AKQKMGIDAKVIQAGLFNTTSTAQDRREMLEVIMRRGTSSLGTDVPSE 872
AK+K+ +D LF S +Q E I+R GT L D E
Sbjct: 1143 AKKKLMLDQ------LFVNKSGSQKE---FEDILRWGTEELFNDSAGE 1181
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 332 bits (851), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 190/527 (36%), Positives = 303/527 (57%), Gaps = 37/527 (7%)
Query: 345 SDLLEGQRQYNSAIHSIQEKVTE----QPSILQGG---ELRSYQIEGLQWMLSLFNNNLN 397
S +E +R+ +A I EK + P + G L+ +Q+EG+ W++ + +N
Sbjct: 12 STTMEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVN 71
Query: 398 GILA-DEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTIL 456
+L D+MGLGKT+Q IS +++L +G+ GP L++ P +V W++E + + P+++ +
Sbjct: 72 VVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLR 131
Query: 457 YDG----RMDERKAMKEELSGEGK-----FNVLLTHYDLIMRDKAFLKKIHWLYLIVDEG 507
Y G R+D RK+M + + K F+VLLT YD+ + D+ FL +I W Y I+DE
Sbjct: 132 YVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEA 191
Query: 508 HRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWF 567
RLKN L L + I RRLL+TGTPIQN+L ELW+L++F +P +F ++ F F
Sbjct: 192 QRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAF 251
Query: 568 NAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK----FLPGKSQVILKCDM 623
+ ++++++ + L ++ F+LRR K+ + + LP +++ + +
Sbjct: 252 KETGDGLSGLDVSNDKE--TYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPL 309
Query: 624 SAWQKVYYQQVTD---VGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVG-DYDMYRHK 679
+ QK Y + G + L++G SLQN+ +QLRK C+HPYLF G + + +
Sbjct: 310 VSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEG 369
Query: 680 EEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKT 739
E +++ASGK +LD+LL +L +GHRVLLFSQMT +DIL+ ++ L Y + RLDGS +
Sbjct: 370 EHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRA 429
Query: 740 EERGSLLQKFNAPD----------SPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQM 789
EER + ++ F+A S F+F++STRAGG+GLNL ADTVI ++ DWNPQ+
Sbjct: 430 EERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQV 489
Query: 790 DQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
D+QA RAHRIGQ RA++K+ + V+
Sbjct: 490 DKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 536
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 327 bits (839), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/444 (41%), Positives = 264/444 (59%), Gaps = 32/444 (7%)
Query: 369 PSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGP 428
P L G L +YQ+EGL ++ ++ N ILADEMGLGKTIQ+I+ +A L E P
Sbjct: 218 PEFLTGT-LHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSP 274
Query: 429 HLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEE--LSGEG---KFNVLLTH 483
HL+VAP + + NW EF+TWAP + ++Y G + R + E EG KF+VLLT
Sbjct: 275 HLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTT 334
Query: 484 YDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQ 543
Y+++ + L I W +I+DEGHRLKN + L +L S + + +LLTGTP+QN+L
Sbjct: 335 YEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSL-SQFTSKHIVLLTGTPLQNNLN 393
Query: 544 ELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 603
EL++L++FL F S+ F+D + EEQ I RLHQ++ P +LRR
Sbjct: 394 ELFALMHFLDADKFGSLEKFQD-------------INKEEQ---ISRLHQMLAPHLLRRL 437
Query: 604 KNEVEK-FLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKC 662
K +V K +P K ++IL+ DMS+ QK Y+ V L + + N+ M+LR+
Sbjct: 438 KKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLT--KKRDAKISNVLMKLRQV 495
Query: 663 CNHPYLFVGDYDMYRHKEE----IIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDI 718
C+HPYL + E ++ ASGK +LLD+++ KL+ GHRVL+++Q + +
Sbjct: 496 CSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYL 555
Query: 719 LEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 778
LE Y ++ + R+DG ER + +FNA +S F FLLSTRAGG+G+NL TADTV
Sbjct: 556 LEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTV 615
Query: 779 IIFDSDWNPQMDQQAEDRAHRIGQ 802
II+DSDWNP D QA R HR+GQ
Sbjct: 616 IIYDSDWNPHADLQAMARVHRLGQ 639
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 327 bits (838), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 269/445 (60%), Gaps = 34/445 (7%)
Query: 369 PSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGP 428
P L G L +YQ+EGL ++ ++ N ILADEMGLGKTIQ+I+ +A L E P
Sbjct: 177 PEFLTGT-LHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSP 233
Query: 429 HLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEE--LSGEG---KFNVLLTH 483
HL+VAP + + NW EF+TWAP + ++Y G + R + E EG KF+VLLT
Sbjct: 234 HLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTT 293
Query: 484 YDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQ 543
Y+++ + L I W +I+DEGHRLKN + L +L S + + +LLTGTP+QN+L
Sbjct: 294 YEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSL-SQFTSKHIVLLTGTPLQNNLN 352
Query: 544 ELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 603
EL++L++FL F S+ F+D + EEQ I RLHQ++ P +LRR
Sbjct: 353 ELFALMHFLDADKFGSLEKFQD-------------INKEEQ---ISRLHQMLAPHLLRRL 396
Query: 604 KNEVEK-FLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKC 662
K +V K +P K ++IL+ DMS+ QK Y+ V + T +K + N+ M+LR+
Sbjct: 397 KKDVLKDKVPPKKELILRVDMSSQQKEVYKAVI-TNNYQVLTKKRDAK-ISNVLMKLRQV 454
Query: 663 CNHPYLFVGDY-----DMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMD 717
C+HPYL + D+ D +++ ASGK +LLD+++ KL+ GHRVL+++Q +
Sbjct: 455 CSHPYL-LPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLY 513
Query: 718 ILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADT 777
+LE Y ++ + R+DG ER + +FNA +S F FLLSTRAGG+G+NL TADT
Sbjct: 514 LLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADT 573
Query: 778 VIIFDSDWNPQMDQQAEDRAHRIGQ 802
VII+DSDWNP D QA R HR+GQ
Sbjct: 574 VIIYDSDWNPHADLQAMARVHRLGQ 598
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 265/544 (48%), Gaps = 96/544 (17%)
Query: 377 LRSYQIEGLQWMLSLFNNNLNG-ILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPK 435
L+ YQ+ G+ ++L L+ + G ILADEMGLGKTIQ I+ + L GPHL+V P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 436 AVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGK------FNVLLTHYDLIMR 489
+VL NW E W PS + Y G R A EL+ K FNVLL Y L R
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGA--ARAAYSRELNSLSKAGKPPPFNVLLVCYSLFER 330
Query: 490 -------DKAFLKKIHWLYLIVDEGHRLKNHECALARTLDS-SYHIQRRLLLTGTPIQNS 541
D+ LK+ W +++DE H LK+ + L S + + +RL+LTGTP+QN
Sbjct: 331 HSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 390
Query: 542 LQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDV-SLTDEEQLLIIRRLHQVIRPFIL 600
L ELWSLL F+LP IF + + VD+ L + E +I R+ ++ PFIL
Sbjct: 391 LHELWSLLEFMLPDIFTT-------------ENVDLKKLLNAEDTELITRMKSILGPFIL 437
Query: 601 RRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVG----LATGSGKS------- 649
RR K++V + L K Q + M Q+ Y++ + R L S KS
Sbjct: 438 RRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKA 497
Query: 650 ---KSLQNLTMQLRKCCNHPYL----------------------FVGDYDMYRHKEEI-- 682
+ + N Q RK NHP L F + + R EE+
Sbjct: 498 LPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKG 557
Query: 683 --------------------------IRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLM 716
+ S K L LLP ++++GHRVL+FSQ T ++
Sbjct: 558 FNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSML 617
Query: 717 DILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTAD 776
DILE L + + RLDGST+ +R +++ FN D F LLSTRAGG GLNL AD
Sbjct: 618 DILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNN-DKSIFACLLSTRAGGQGLNLTGAD 676
Query: 777 TVIIFDSDWNPQMDQQAEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
TVII D D+NPQ+D+QAEDR HRIGQ K AK+K+ +DA V+
Sbjct: 677 TVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVL 736
Query: 837 QAGL 840
++G+
Sbjct: 737 ESGV 740
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 265 bits (678), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 189/306 (61%), Gaps = 4/306 (1%)
Query: 366 TEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGV 425
T+ P +L+ LR YQ GL W+++++ LNGILADEMGLGKTI TI+L+AHL KG+
Sbjct: 526 TKLPFLLKHS-LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGI 584
Query: 426 TGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYD 485
GPHLIV P +V+ NW EF W P+ K + Y G ERK ++ F+V +T Y
Sbjct: 585 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYR 644
Query: 486 LIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQEL 545
L+++D K+ W YLI+DE H +KN + +TL +++ +RR+LLTGTP+QN L EL
Sbjct: 645 LVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMEL 703
Query: 546 WSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKN 605
WSL++FL+P +F S F+DWF P A V+ ++ +I RLH V+RPF+LRR K
Sbjct: 704 WSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKE--VIDRLHNVLRPFLLRRLKR 761
Query: 606 EVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNH 665
+VEK LP K + ++ C +S Q+ Y+ SG + ++ MQLRK CNH
Sbjct: 762 DVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNH 821
Query: 666 PYLFVG 671
P LF G
Sbjct: 822 PDLFEG 827
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Query: 686 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSL 745
GK + L LL KL+ GHR L+F+QMT+++D+LE ++ L+ Y ++RLDGST EER +L
Sbjct: 1074 CGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTL 1133
Query: 746 LQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKX 805
+Q+FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP MDQQA+DR HRIGQ +
Sbjct: 1134 MQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1192
Query: 806 XXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAGLFNT 843
+A QK +D VIQ G +NT
Sbjct: 1193 VHIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNT 1230
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 247 bits (631), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 200/319 (62%), Gaps = 20/319 (6%)
Query: 366 TEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGV 425
T Q L G L+ YQ++GLQW+++ + LNGILADEMGLGKTIQ ++ +AHL E K +
Sbjct: 575 TVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 634
Query: 426 TGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSG------EGKFNV 479
GP L+VAP +VL NW +E S + P +KT+ Y G + ER +++ ++ + F++
Sbjct: 635 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHI 694
Query: 480 LLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQ 539
L+T Y L++ D+ + +++ W Y+++DE +K+ +TL S++ + RLLLTGTPIQ
Sbjct: 695 LITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTL-LSFNCRNRLLLTGTPIQ 753
Query: 540 NSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFI 599
N++ ELW+LL+F++P +F++ F +WF+ + + T E L RLH +++PF+
Sbjct: 754 NNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQL--NRLHAILKPFM 811
Query: 600 LRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLA----TGSG-----KSK 650
LRR K +V L K++V + C +S+ Q+ +YQ + + ++ LA + G K
Sbjct: 812 LRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKN--KISLAELFDSNRGQFTDKKVL 869
Query: 651 SLQNLTMQLRKCCNHPYLF 669
+L N+ +QLRK CNHP LF
Sbjct: 870 NLMNIVIQLRKVCNHPELF 888
Score = 143 bits (360), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Query: 681 EIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTE 740
+++ SGK + LD LL +LR HRVLLF+QMT++++ILE Y+ YK+LRLDGS+
Sbjct: 1200 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1259
Query: 741 ERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRI 800
+R +++ F S F+FLLSTRAGGLG+NL ADTVI ++SDWNP +D QA DRAHR+
Sbjct: 1260 DRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1318
Query: 801 GQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAG 839
GQ K RA QK + V+ G
Sbjct: 1319 GQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1357
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/490 (33%), Positives = 247/490 (50%), Gaps = 67/490 (13%)
Query: 376 ELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAH-LMEYKGVTG-----PH 429
+LR YQ EG+ W+ L L+GIL D+MGLGKT+Q +++A E +G T P
Sbjct: 1450 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1509
Query: 430 LIVAPKAVLPNWMNEFSTWAP-SIKTIL-YDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
+IV P ++ +W E + S+ ++L Y G +R +++E+ + NV++T YD++
Sbjct: 1510 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNH---NVIITSYDVV 1566
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
+D +L + W Y I+DEGH +KN + + + Q RL+L+GTPIQN++ ELWS
Sbjct: 1567 RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAV-KQLKAQHRLILSGTPIQNNIMELWS 1625
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVD--VSLTDEEQ-LLIIRRLHQVIRPFILRRKK 604
L +FL+P + F+ + P D S D E +L + LH+ + PF+LRR K
Sbjct: 1626 LFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTK 1685
Query: 605 NEVEKFLPGKSQVILKCDMSAWQKVYYQQVT------------------DVGRVGLATGS 646
EV LP K CD+S Q Y+Q + D G +A
Sbjct: 1686 EEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTK 1745
Query: 647 GKSKSLQNLTMQLRKCCNHPYLFVGD----------YDMYRHKEEII------RASGKFE 690
+ Q L L K C+HP L +GD M +II + S K
Sbjct: 1746 ASTHVFQALQY-LLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLV 1804
Query: 691 LLDRLLPK-------------LRRAGHRVLLFSQMTRLMDILEIYL---RLHDYKFLRLD 734
L +L + L HRVL+F+Q L+DI+E L + ++RLD
Sbjct: 1805 ALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLD 1864
Query: 735 GSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAE 794
GS E+R +++ FN+ D + LL+T GGLGLNL +ADT++ + DWNP D QA
Sbjct: 1865 GSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAM 1923
Query: 795 DRAHRIGQKK 804
DRAHR+GQK+
Sbjct: 1924 DRAHRLGQKR 1933
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/490 (33%), Positives = 247/490 (50%), Gaps = 67/490 (13%)
Query: 376 ELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAH-LMEYKGVTG-----PH 429
+LR YQ EG+ W+ L L+GIL D+MGLGKT+Q +++A E +G T P
Sbjct: 1481 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1540
Query: 430 LIVAPKAVLPNWMNEFSTWAP-SIKTIL-YDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
+IV P ++ +W E + S+ ++L Y G +R +++E+ + NV++T YD++
Sbjct: 1541 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNH---NVIITSYDVV 1597
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
+D +L + W Y I+DEGH +KN + + + Q RL+L+GTPIQN++ ELWS
Sbjct: 1598 RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAV-KQLKAQHRLILSGTPIQNNIMELWS 1656
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVD--VSLTDEEQ-LLIIRRLHQVIRPFILRRKK 604
L +FL+P + F+ + P D S D E +L + LH+ + PF+LRR K
Sbjct: 1657 LFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTK 1716
Query: 605 NEVEKFLPGKSQVILKCDMSAWQKVYYQQVT------------------DVGRVGLATGS 646
EV LP K CD+S Q Y+Q + D G +A
Sbjct: 1717 EEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTK 1776
Query: 647 GKSKSLQNLTMQLRKCCNHPYLFVGD----------YDMYRHKEEII------RASGKFE 690
+ Q L L K C+HP L +GD M +II + S K
Sbjct: 1777 ASTHVFQALQY-LLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLV 1835
Query: 691 LLDRLLPK-------------LRRAGHRVLLFSQMTRLMDILEIYL---RLHDYKFLRLD 734
L +L + L HRVL+F+Q L+DI+E L + ++RLD
Sbjct: 1836 ALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLD 1895
Query: 735 GSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAE 794
GS E+R +++ FN+ D + LL+T GGLGLNL +ADT++ + DWNP D QA
Sbjct: 1896 GSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAM 1954
Query: 795 DRAHRIGQKK 804
DRAHR+GQK+
Sbjct: 1955 DRAHRLGQKR 1964
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 232/472 (49%), Gaps = 55/472 (11%)
Query: 376 ELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPK 435
+L YQ G+QW+ L GI+ DEMGLGKTIQ +S + L + + P +I+ P
Sbjct: 384 KLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSL-HFSKMYKPSIIICPV 442
Query: 436 AVLPNWMNEFSTWAPSIKT-ILYDGRMDERKAMKEELSGEGKF----------------- 477
+L W E W P IL+D D G+GK
Sbjct: 443 TLLRQWRREAQKWYPDFHVEILHDSAQDSGHG-----KGQGKASESDYDSESSVDSDHEP 497
Query: 478 --------------------NVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECAL 517
+L+T Y+ + L I W Y ++DEGHR++N +
Sbjct: 498 KSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDI 557
Query: 518 ARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAP-----FA 572
+ R+++TG PIQN L ELWSL +F+ P + FE F+ P +A
Sbjct: 558 TLVCKQLQTVH-RIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYA 616
Query: 573 DRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQ 632
+ + ++ + ++ L +I P++LRR K +V L K++ +L C ++ Q+ Y+
Sbjct: 617 NASPLQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYR 674
Query: 633 QVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYRHKEEIIRASGKFELL 692
V G SL + + +RK CNHP L ++ SGK +++
Sbjct: 675 AFLASSEVE-QIFDGNRNSLYGIDV-MRKICNHPDLLEREHSHQNPDYGNPERSGKMKVV 732
Query: 693 DRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAP 752
+L ++ GHRVLLFSQ +++DILE +L ++Y + R+DG T ++R +L+ +FN
Sbjct: 733 AEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNS 792
Query: 753 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+ F+F+L+T+ GGLG NL A+ VIIFD DWNP D QA +RA RIGQKK
Sbjct: 793 ED-MFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKK 843
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 234 bits (596), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 53/352 (15%)
Query: 366 TEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGV 425
T Q L G L+ YQ++GLQW+++ + LNGILADEMGLGKTIQ ++ +AHL E K +
Sbjct: 575 TVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 634
Query: 426 TGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSG------------ 473
GP L+VAP +VL NW +E S + P +KT+ Y G + ER +++ ++
Sbjct: 635 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIIS 694
Query: 474 ---------------------------EGKFNVLLTHYDLIMRDKAFLKKIHWLYLIVDE 506
+ F++L+T Y L++ D+ + +++ W Y+++DE
Sbjct: 695 FDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDE 754
Query: 507 GHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDW 566
+K+ +TL S++ + RLLLTGTPIQN++ ELW+LL+F++P +F++ F +W
Sbjct: 755 AQAIKSSSSIRWKTL-LSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEW 813
Query: 567 FNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAW 626
F+ + + T E L RLH +++PF+LRR K +V L K++V + C +S+
Sbjct: 814 FSKGIENHAEHGGTLNEHQL--NRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSR 871
Query: 627 QKVYYQQVTDVGRVGLA----TGSG-----KSKSLQNLTMQLRKCCNHPYLF 669
Q+ +YQ + + ++ LA + G K +L N+ +QLRK CNHP LF
Sbjct: 872 QQAFYQAIKN--KISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELF 921
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Query: 681 EIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTE 740
+++ SGK + LD LL +LR HRVLLF+QMT++++ILE Y+ YK+LRLDGS+
Sbjct: 1233 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1292
Query: 741 ERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRI 800
+R +++ F S F+FLLSTRAGGLG+NL ADTVI ++SDWNP +D QA DRAHR+
Sbjct: 1293 DRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1351
Query: 801 GQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVIQAG 839
GQ K RA QK + V+ G
Sbjct: 1352 GQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1390
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 232 bits (591), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 261/531 (49%), Gaps = 98/531 (18%)
Query: 352 RQYNSAIHSIQEKVTE-QPSILQGGELRSY-------------QIEGLQWMLSLFNNNLN 397
R YN+ H E+ E + SI G SY Q EGL W+ SL
Sbjct: 338 RSYNAKRHGYDERSLEDEGSITLTGLNLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKG 397
Query: 398 GILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILY 457
GIL D+MGLGKT+Q S +A L K + L+VAPK +LP+WM E +T S T Y
Sbjct: 398 GILGDDMGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKTLLPHWMKELATVGLSQMTREY 456
Query: 458 DGRMDERKA--MKEELSGEGKFNVLLTHYDLIMRD-KAFLKKIH-----------WLYLI 503
G + + + L G+G +LLT YD++ + KA H W Y+I
Sbjct: 457 YGTSTKAREYDLHHILQGKG---ILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMI 513
Query: 504 VDEGHRLKNHECALARTL--DSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVH 561
+DEGH +KN A++L S H R++++GTPIQN+L+ELW+L NF P + +
Sbjct: 514 LDEGHLIKNPNTQRAKSLLEIPSSH---RIIISGTPIQNNLKELWALFNFSCPGLLGDKN 570
Query: 562 NFEDWFNAPFADRVDVSLTDEEQLL---IIRRLHQVIRPFILRRKKNEV------EKFLP 612
F+ + D + TD EQ + + + L + I+PF LRR K+EV L
Sbjct: 571 WFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLS 630
Query: 613 GKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVG- 671
K ++++ ++A Q+ Y+ + + L+ G L LT+ L+K C+HP L
Sbjct: 631 KKDEIVVWLRLTACQRQLYEAFLN-SEIVLSAFDG--SPLAALTI-LKKICDHPLLLTKR 686
Query: 672 --------------------------------DYDMYRHKEEIIRASGKF--ELLDRLLP 697
D D ++ K + I F LL+ L+P
Sbjct: 687 AAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIP 746
Query: 698 KLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFN----APD 753
+ GHRVL+FSQ +++++++ L + Y FLR+DG+TK +R +++F AP
Sbjct: 747 E----GHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAP- 801
Query: 754 SPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQ K
Sbjct: 802 ----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTK 848
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 231/474 (48%), Gaps = 49/474 (10%)
Query: 377 LRSYQIEGLQWMLSLFNN-----NLNG-ILADEMGLGKTIQTISLIAHLMEYKGVTGP-- 428
LR +Q EG+Q+M + N+NG ILAD+MGLGKT+Q+I+L+ L+ +G G
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLL-CQGFDGTPM 238
Query: 429 ---HLIVAPKAVLPNWMNEFSTWAPS---IKTILYDGRMDERKAMKEELSGEGKFNVLLT 482
+IV P +++ NW E W + + R D + VL+
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLII 298
Query: 483 HYDLI-MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNS 541
Y+ M F + LI DE HRLKN + R L +S +RR+LL+GTP+QN
Sbjct: 299 SYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRAL-ASLTCKRRVLLSGTPMQND 357
Query: 542 LQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPF 598
L+E ++++NF P +F ++ AP + + T+EE+ L R L + F
Sbjct: 358 LEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQF 417
Query: 599 ILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQ 658
ILRR + LP K ++ C M+ Q Y + + LA + ++K L +T
Sbjct: 418 ILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLCMQLKRALADNAKQTKVLAYITA- 476
Query: 659 LRKCCNHPYLF-----------VG--------DYDMYRHKEEI--------IRASGKFEL 691
L+K CNHP L VG +M+ + + SGK +
Sbjct: 477 LKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHV 536
Query: 692 LDRLLPKLRR-AGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFN 750
L RLL LRR R++L S T+ +D+ R Y FLRLDGST +R L+ + N
Sbjct: 537 LSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLN 596
Query: 751 APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
P F FLLS++AGG GLNL A+ +++FD DWNP D+QA R R GQKK
Sbjct: 597 DPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKK 650
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 230/476 (48%), Gaps = 51/476 (10%)
Query: 377 LRSYQIEGLQWMLSLFNN-----NLNG-ILADEMGLGKTIQTISLIAHLMEYKGVTGP-- 428
LR +Q EG+Q+M + N+NG ILAD+MGLGKT+Q+I+L+ L+ +G G
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLL-CQGFDGTPM 238
Query: 429 ---HLIVAPKAVLPNWMNEFSTWAPS---IKTILYDGRMDERKAMKEELSGEGKFNVLLT 482
+IV P +++ NW E W + + R D + VL+
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLII 298
Query: 483 HYDLI-MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNS 541
Y+ M F + LI DE HRLKN + R L +S +RR+LL+GTP+QN
Sbjct: 299 SYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRAL-ASLTCKRRVLLSGTPMQND 357
Query: 542 LQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPF 598
L+E ++++NF P +F ++ AP + + T+EE+ L R L + F
Sbjct: 358 LEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQF 417
Query: 599 ILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRV--GLATGSGKSKSLQNLT 656
ILRR + LP K ++ C M+ Q Y + LA + ++K L +T
Sbjct: 418 ILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYIT 477
Query: 657 MQLRKCCNHPYLF-----------VG--------DYDMYRHKEEI--------IRASGKF 689
L+K CNHP L VG +M+ + + SGK
Sbjct: 478 A-LKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKM 536
Query: 690 ELLDRLLPKLRR-AGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQK 748
+L RLL LRR R++L S T+ +D+ R Y FLRLDGST +R L+ +
Sbjct: 537 HVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNR 596
Query: 749 FNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
N P F FLLS++AGG GLNL A+ +++FD DWNP D+QA R R GQKK
Sbjct: 597 LNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKK 652
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 146/280 (52%), Gaps = 22/280 (7%)
Query: 377 LRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVT---------- 426
L +Q EG+++M +L+ NN GIL D+MGLGKTIQTI+ +A + G
Sbjct: 139 LLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDK 198
Query: 427 GPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDL 486
GP LI+ P +++ NW +EFS WA K +Y G R + E+L G VL+T +D
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWASFFKVSVYHG--SNRDMILEKLKARG-VEVLVTSFDT 255
Query: 487 IMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELW 546
L I+W +I DE HRLKN + L ++R+ LTGT +QN + EL+
Sbjct: 256 FRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEAC-LEIKTKKRIGLTGTVMQNKISELF 314
Query: 547 SLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLII-----RRLHQVIRPFILR 601
+L ++ P + +F D+++ P ++ T E+ + I + L ++R ++LR
Sbjct: 315 NLFEWVAPGSLGTREHFRDFYDEPL--KLGQRATAPERFVQIADKRKQHLGSLLRKYMLR 372
Query: 602 RKKNE-VEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRV 640
R K E + + GK ++ C MS Q+ YQ++ + +
Sbjct: 373 RTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEI 412
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 683 IRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEER 742
++ GK L++L+ G ++LLFS R++DILE +L Y F RLDGST T R
Sbjct: 524 VKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLR 583
Query: 743 GSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQ 802
SL+ FNA S +FL+ST+AGGLGLNL +A+ V+IFD +WNP D QA+DR+ R GQ
Sbjct: 584 QSLVDDFNASPSKQ-VFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQ 642
Query: 803 KK 804
K+
Sbjct: 643 KR 644
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 196/447 (43%), Gaps = 55/447 (12%)
Query: 376 ELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPK 435
+L +Q EG++++L + +LADEMGLGKT+Q I++ + E + P LI+AP
Sbjct: 171 KLLPFQREGIEFIL---QHGGRVLLADEMGLGKTLQAIAVTTCVQE----SWPVLIIAPS 223
Query: 436 AVLPNWMNEFSTW---APSIKTILYDGRMDERKA--------MKEELSGEGKFNVLLTHY 484
++ +W W PS ++ K K + +G FN++ Y
Sbjct: 224 SLRLHWATMIHQWLHVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGVFNIV--SY 281
Query: 485 DLIMRDKAFLKKIHWLYLIVDEGHRLKNHECA-LARTLDSSYHIQRRLLLTGTPIQNSLQ 543
D++ + L + + +I DE H LKN + + L Q +LL+GTP +
Sbjct: 282 DVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPALSRPI 341
Query: 544 ELWSLLNFLLPSIFNSVHNFEDWF--NAPFADRVDVSLTDEEQLLIIRRLHQVIRPFIL- 600
EL+ L L P ++ ++H + + F S DE LH +++ ++
Sbjct: 342 ELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQGASNHDE--------LHNLMKATVMI 393
Query: 601 RRKKNEVEKFLPGK--SQVILKC---DMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNL 655
RR K +V LP K QV L DM ++++ ++ KSL+ +
Sbjct: 394 RRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFHELKVVKSKIKDCISEDDIKSLKFI 453
Query: 656 TMQLRKCCNHPYLFVGDYDMYRHKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQMTRL 715
L N Y + + + L+ ++ AG + L+F+ +
Sbjct: 454 EKNL---INKIYT----------DSAVAKIPAVLDYLENVI----EAGCKFLVFAHHQSM 496
Query: 716 MDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTA 775
++ L +L+ +R+DGST R +L+ F D +LS RA G+G+ L A
Sbjct: 497 LEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDE-IKAAVLSIRAAGVGITLTAA 555
Query: 776 DTVIIFDSDWNPQMDQQAEDRAHRIGQ 802
TVI + W P QAEDRAHRIGQ
Sbjct: 556 STVIFAELSWTPGDLIQAEDRAHRIGQ 582
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 146/323 (45%), Gaps = 58/323 (17%)
Query: 398 GILADEMGLGKTIQTISLI----------------------------AHL-MEYKGVTGP 428
GILAD MGLGKT+ TI+LI H+ + G
Sbjct: 683 GILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 429 HLIVAPKAVLPNWMNEFSTWAP--SIKTILYDG--RMDERKAMKEELSGEGKFNVLLTHY 484
LI+ P A+L W +E T + ++ ++Y G R + KA+ + VL + Y
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAY 802
Query: 485 DLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALAR-TLDSSYHIQRRLLLTGTPIQNSLQ 543
M + F +I W +++DE H +K+ + A+ T + S H R LTGTP+QN L+
Sbjct: 803 KQDMANSIF-HRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHC--RWCLTGTPLQNKLE 859
Query: 544 ELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 603
+L+SLL FL + E W N + ++ + ++ + ++RP +LRR
Sbjct: 860 DLYSLLCFL---------HVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRT 910
Query: 604 KNEVEK------FLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQN--- 654
K +K LP +++C+ S ++ +Y + +V + K L N
Sbjct: 911 KETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYAN 970
Query: 655 ---LTMQLRKCCNHPYLFVGDYD 674
L ++LR+CCNHP+L + D
Sbjct: 971 ILELLLRLRQCCNHPFLVMSRAD 993
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 684 RASGKFELLDRLLPKLRRAG--HRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEE 741
+ S K L + L K++++G + ++FSQ T +D+LEI LR ++FLR DG +
Sbjct: 1106 KESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKG 1165
Query: 742 RGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIG 801
R +L++FN + L+S +AGG+GLNL A +V + D WNP +++QA R HRIG
Sbjct: 1166 REKVLKEFNETKQKTIL-LMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIG 1224
Query: 802 QKK 804
QK+
Sbjct: 1225 QKR 1227
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 47/339 (13%)
Query: 356 SAIHSIQEKVTEQPSILQGGELRSYQIEGLQWM----------LSLFNNNLNGILADEMG 405
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 406 LGKTIQTISLIAHLMEYKGVT-GPHLIVAPKAVLPNWMNEFSTWAPS-IKT--ILYDGRM 461
LGKT Q I+ + M + LIV P VL NW +EF W PS +K I G +
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDV 817
Query: 462 DERK--------AMKEELSGEGKFNVLLTHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNH 513
K +K+ + G N L D+ L+ DE H +KN
Sbjct: 818 SRYKFFYERNFWGVKDLNAARGICNALRDGPDI---------------LVCDEAHIIKNT 862
Query: 514 ECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFAD 573
+ + L QRR+ LTG+P+QN+L E + +++F+ S F + F P +
Sbjct: 863 KADTTQAL-KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIEN 921
Query: 574 RVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVY 630
++ T E+ ++ +R L++ ++ F+ R N V+K LP K+ ++ +S Q++
Sbjct: 922 GQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRIL 981
Query: 631 YQQVTDVGRVGLATGSGKSKSLQNLTMQ---LRKCCNHP 666
YQ+ ++ G + G + +N L + NHP
Sbjct: 982 YQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1018
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 686 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYL-RLHDY----KF-------LRL 733
SGK LL +L G + L+FSQ +D++E+YL R+ + KF R+
Sbjct: 1093 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1152
Query: 734 DGSTKTEERGSLLQKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 792
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1153 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1212
Query: 793 AEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
A RA R GQKK R K G+ A+V+
Sbjct: 1213 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1256
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 194/474 (40%), Gaps = 80/474 (16%)
Query: 399 ILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSI-----K 453
I++ G GKT TI + ++ P +I+AP ++L W EF W SI
Sbjct: 860 IMSHAPGTGKTRLTIIFLQAYLQCFPDCKP-VIIAPASLLLTWAEEFKKWNISIPFHNLS 918
Query: 454 TILYDGRMDERKA---MKEELSGEGKFNVLLTHYDLIMRDKAFLKKIHWLY--------- 501
++ + G+ + M++ + + + ++ K+ L + LY
Sbjct: 919 SLDFTGKENSAALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAGVKDE 978
Query: 502 -----------------------------LIVDEGHRLKNHECALARTLDSSYHIQRRLL 532
L++DE H +N + +TL S Q+R+L
Sbjct: 979 DKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTL-SKVETQKRIL 1037
Query: 533 LTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLH 592
L+GTP QN+ EL ++L P + + R +L +E I L
Sbjct: 1038 LSGTPFQNNFLELCNVLGLARPKYLERLTSTLKKSGMTVTKRGKKNLGNEINNRGIEELK 1097
Query: 593 QVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSL 652
V+ PF+ K + ++ LPG + ++ + Q+ + + T + K+K++
Sbjct: 1098 AVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIE-------VTHNRKTKNV 1150
Query: 653 QNLTMQLRKCCNHPYLF----VGDYDMYRHKEEII----------RASGKFELLDRLLPK 698
+L HP L + + + E ++ S K L +
Sbjct: 1151 FETEHKLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVEL 1210
Query: 699 LRRAGHRVLLFSQMTRLMDILEIYLRLHDYKF--------LRLDGSTKTEERGSLLQKFN 750
+VL+FSQ +D L++ ++ +F L + G + ++R +L+ +FN
Sbjct: 1211 CEVIKEKVLVFSQY---IDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFN 1267
Query: 751 APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
P S +FL ST+A G++L A VI+ D WNP +++QA RA+RIGQK+
Sbjct: 1268 DPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKR 1321
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 158/368 (42%), Gaps = 83/368 (22%)
Query: 397 NGILADEMGLGKTIQTISLI-AH------------------------------------- 418
GILAD MGLGKT+ TISL+ AH
Sbjct: 414 GGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
Query: 419 ------LMEYKGV--TGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYDGRMDERKAMKEE 470
L+E K V G +LIV P +L W E A +Y R +
Sbjct: 474 LGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKL 533
Query: 471 LSGEGKFNVLLTHYDLIMR--------DKAFLKKIHWLYLIVDEGHRLKNHECALARTLD 522
LS + +V++T Y ++ D + + W +++DE H +KN + ++
Sbjct: 534 LS---QSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAA- 589
Query: 523 SSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDE 582
++ RR LTGTPIQN+L++L+SLL FL + + + PF + DE
Sbjct: 590 AALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEE------GDE 643
Query: 583 EQLLIIRRLHQVIRPFILRRKKNEVEK------FLPGKSQVILKCDMSAWQKVYYQQVTD 636
L +++ +++P +LRR K+ ++ LP ++ C++S ++ +Y +
Sbjct: 644 RGLKLVQ---SILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFK 700
Query: 637 VGRVGLATGSGKSKSLQN------LTMQLRKCCNHPYLFV--GDYDMYRHKEEIIR--AS 686
+V + K L N L ++LR+CC+HP+L + GD Y ++ + S
Sbjct: 701 RSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLS 760
Query: 687 GKFELLDR 694
GK L+R
Sbjct: 761 GKSSGLER 768
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 686 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSL 745
S K L L LR +G + +LFSQ T +D+L+I L +++ F+RLDG+ ++R +
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 746 LQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
L++F+ D + L+S +AGG+G+NL A + D WNP +++QA R HRIGQ K
Sbjct: 922 LKEFSE-DGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTK 979
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 208/487 (42%), Gaps = 72/487 (14%)
Query: 373 QGGELRSYQIEGLQWMLS-LFNNNLNG-ILADEMGLGKTIQTISLIAHLMEYKGVTGPHL 430
E++ +QIEG Q++ S L ++ G I+A G GKT IS + + P L
Sbjct: 346 HAAEMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKP-L 404
Query: 431 IVAPKAVLPNWMNEFSTWAPSIKTIL--YDGRMDER----KAMKEELSGEGKFNVLLTHY 484
+V PK +LP W EF W +L Y + + R +K+ + + + +
Sbjct: 405 VVLPKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQF 464
Query: 485 DLIMRD--------KAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGT 536
I+ D + L K+ + LI+DEGH +N + L ++L + R+++L+GT
Sbjct: 465 STIVCDDTTDSLSCQEILLKVPSI-LILDEGHTPRNEDTNLLQSL-AQVQTPRKVVLSGT 522
Query: 537 PIQNSLQELWSLLNFLLPSIF------NSVHNFEDW---------------FNAPFADRV 575
QN ++E++++LN + P ++V + + F + V
Sbjct: 523 LYQNHVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETV 582
Query: 576 DVSLTDEEQLLIIRRLHQVIRPF---ILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQ 632
+ +L E + ++ Q +R +L K + LPG + + ++S Q +
Sbjct: 583 EHTLQKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGLADFTVVLNLSPKQLNEVK 642
Query: 633 QVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLF--------VGDYDMYRHKEEIIR 684
++ R + G + L HP L V D M E++
Sbjct: 643 KLRREKRKFKVSAVGSAIYL------------HPKLKVFSDKSDDVSDTTMDEMVEKLDL 690
Query: 685 ASG-KFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYLRLH-----DYKFLRLDGSTK 738
G K + L+ AG ++L+FSQ + LE L + L G+T
Sbjct: 691 NEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTS 750
Query: 739 TEERGSLLQKFN-APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRA 797
+E+R ++ FN +PD+ +F S +A G G++L A ++I D NP + +QA RA
Sbjct: 751 SEQREWSMETFNSSPDAK--IFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRA 808
Query: 798 HRIGQKK 804
R GQKK
Sbjct: 809 FRPGQKK 815
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 56/354 (15%)
Query: 356 SAIHSIQEKVTEQPSILQGGELRSYQIEGLQWM----------LSLFNNNLNGILADEMG 405
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 406 LGKTIQTISLIAHLMEYKGVT-GPHLIVAPKAVLPNWMNEFSTWAPS-IKTILYDGRMDE 463
LGKT Q I+ + M + LIV P VL NW +EF W PS +K +
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPL-------- 809
Query: 464 RKAMKEELSGEGKFN----------VLLTHYDLIMRDKAFLKKIHWL------------- 500
R M ++S E +F+ V L Y R+ + + + L
Sbjct: 810 RIFMLGDVSRERRFDLLTKWRKKGGVFLMGY-TNFRNLSLGRGVKDLNAARGICNALRDG 868
Query: 501 --YLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFN 558
L+ DE H +KN + + L QRR+ LTG+P+QN+L E + +++F+
Sbjct: 869 PDILVCDEAHIIKNTKADTTQAL-KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 927
Query: 559 SVHNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKNEVEKFLPGKS 615
S F + F P + ++ T E+ ++ +R L++ ++ F+ R N V+K LP K+
Sbjct: 928 SSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 987
Query: 616 QVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQ---LRKCCNHP 666
++ +S Q++ YQ+ ++ G + G + +N L + NHP
Sbjct: 988 VFVISVKLSPLQRILYQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1039
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 686 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYL-RLHDY----KF-------LRL 733
SGK LL +L G + L+FSQ +D++E+YL R+ + KF R+
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 734 DGSTKTEERGSLLQKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 792
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 793 AEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
A RA R GQKK R K G+ A+V+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 56/354 (15%)
Query: 356 SAIHSIQEKVTEQPSILQGGELRSYQIEGLQWM----------LSLFNNNLNGILADEMG 405
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 406 LGKTIQTISLIAHLMEYKGVT-GPHLIVAPKAVLPNWMNEFSTWAPS-IKTILYDGRMDE 463
LGKT Q I+ + M + LIV P VL NW +EF W PS +K +
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPL-------- 809
Query: 464 RKAMKEELSGEGKFN----------VLLTHYDLIMRDKAFLKKIHWL------------- 500
R M ++S E +F+ V L Y R+ + + + L
Sbjct: 810 RIFMLGDVSRERRFDLLTKWRKKGGVFLMGY-TNFRNLSLGRGVKDLNAARGICNALRDG 868
Query: 501 --YLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFN 558
L+ DE H +KN + + L QRR+ LTG+P+QN+L E + +++F+
Sbjct: 869 PDILVCDEAHIIKNTKADTTQAL-KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 927
Query: 559 SVHNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKNEVEKFLPGKS 615
S F + F P + ++ T E+ ++ +R L++ ++ F+ R N V+K LP K+
Sbjct: 928 SSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 987
Query: 616 QVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQ---LRKCCNHP 666
++ +S Q++ YQ+ ++ G + G + +N L + NHP
Sbjct: 988 VFVISVKLSPLQRILYQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1039
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 686 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYL-RLHDY----KF-------LRL 733
SGK LL +L G + L+FSQ +D++E+YL R+ + KF R+
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 734 DGSTKTEERGSLLQKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 792
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 793 AEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
A RA R GQKK R K G+ A+V+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 56/354 (15%)
Query: 356 SAIHSIQEKVTEQPSILQGGELRSYQIEGLQWM----------LSLFNNNLNGILADEMG 405
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 406 LGKTIQTISLIAHLMEYKGVT-GPHLIVAPKAVLPNWMNEFSTWAPS-IKTILYDGRMDE 463
LGKT Q I+ + M + LIV P VL NW +EF W PS +K +
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPL-------- 809
Query: 464 RKAMKEELSGEGKFN----------VLLTHYDLIMRDKAFLKKIHWL------------- 500
R M ++S E +F+ V L Y R+ + + + L
Sbjct: 810 RIFMLGDVSRERRFDLLTKWRKKGGVFLMGY-TNFRNLSLGRGVKDLNAARGICNALRDG 868
Query: 501 --YLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFN 558
L+ DE H +KN + + L QRR+ LTG+P+QN+L E + +++F+
Sbjct: 869 PDILVCDEAHIIKNTKADTTQAL-KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 927
Query: 559 SVHNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKNEVEKFLPGKS 615
S F + F P + ++ T E+ ++ +R L++ ++ F+ R N V+K LP K+
Sbjct: 928 SSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 987
Query: 616 QVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQ---LRKCCNHP 666
++ +S Q++ YQ+ ++ G + G + +N L + NHP
Sbjct: 988 VFVISVKLSPLQRILYQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1039
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 686 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEIYL-RLHDY----KF-------LRL 733
SGK LL +L G + L+FSQ +D++E+YL R+ + KF R+
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 734 DGSTKTEERGSLLQKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 792
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 793 AEDRAHRIGQKKXXXXXXXXXXXXXXXXXXXRAKQKMGIDAKVI 836
A RA R GQKK R K G+ A+V+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 223/527 (42%), Gaps = 81/527 (15%)
Query: 341 NGDTSDLLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNG-- 398
NG+TS G + ++ I + EK+ P E+R +Q EG +++ NNL
Sbjct: 233 NGETSRDFSGIQSSHTNI--LGEKMFIHP--WHDQEMRPHQTEGFRFLC----NNLAADE 284
Query: 399 ----ILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKT 454
ILA G GKT IS + M P L+V PK ++ +W EF+ W K
Sbjct: 285 PGGCILAHAPGSGKTFLLISFLQSFMAMDPQARP-LVVLPKGIIESWKREFTLWEVE-KI 342
Query: 455 ILYDGRMDERKAMKEELSGEGKF----NVLLTHYDLIMR------------DKAFLKKIH 498
L D + ++ K++L G++ ++L Y R D +
Sbjct: 343 PLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRIICDDNFEAASEDCKLILLEK 402
Query: 499 WLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFN 558
LI+DEGH +N E + +L + +R+++LTGT QN+++E++++L+ + P
Sbjct: 403 PTLLILDEGHTSRNKETYMLSSL-ARVKTRRKVVLTGTLFQNNVEEVFNILDLVRPKFLK 461
Query: 559 -------------------------SVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQ 593
S + E F A + S + +I+ L +
Sbjct: 462 RPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELTLQRSTNFSAKASLIKDLRE 521
Query: 594 VIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQK---------VYYQQVTDVGRVGLAT 644
+ R IL K + LPG S+ + ++S+ Q+ ++Q++ +G
Sbjct: 522 MTRN-ILHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVKGLRKMELFKQIS-LGAALYIH 579
Query: 645 GSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYRHKEEIIRASGKFELLDRLLPKLRRAGH 704
KS +N + + ++ + M + +R K + LL G
Sbjct: 580 PKLKSFLEENPSNGEKGFSDNNTTVMKLDKMLKKIN--VRDGVKMKFFLNLLALCESTGE 637
Query: 705 RVLLFSQ-------MTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYF 757
++L+FSQ + RLM ++ + RL F + G + E+R +++FN
Sbjct: 638 KLLVFSQYIVPIKTLERLMSSMKGW-RLGKEMF-TITGDSSNEQREWSMERFNNSLEAK- 694
Query: 758 MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+F S +A G G++L A V+I D NP + QQA RA+R GQK+
Sbjct: 695 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKR 741
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 130/297 (43%), Gaps = 62/297 (20%)
Query: 354 YNSAIHSIQEKVTEQ---PSILQGGELRSYQIEGLQWMLS---LFNNNLNGILADEMGLG 407
Y +A+ +++ TE+ P +L +R +I L WM + L GILAD+ GLG
Sbjct: 28 YQAALQDLKQPKTEKDLPPGVLTVPLMRHQKI-ALNWMRKKEKRSRHCLGGILADDQGLG 86
Query: 408 KTIQTISLI--------AHLMEYKGV-TGPHLIVAPKAVLPNWMNEFS------------ 446
KTI TISLI + + KG +G LIV P +V+ W E
Sbjct: 87 KTISTISLILLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVL 146
Query: 447 -------TWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYD------------LI 487
T P+ + +YD M + E+ N +L YD LI
Sbjct: 147 VHHGSHRTKDPT-EIAIYDVVMTTYAIVTNEVPQ----NPMLNRYDSMRGRESLDGSSLI 201
Query: 488 MRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
L ++ WL +++DE H +KNH +A+ S +RR LTGTPI+N + +L+S
Sbjct: 202 QPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKAC-FSLRAKRRWCLTGTPIKNKVDDLYS 260
Query: 548 LLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKK 604
FL + ++F AP D++ L ++L ++R +LRR K
Sbjct: 261 YFRFLRYHPYAMCNSFHQRIKAPI---------DKKPLHGYKKLQAILRGIMLRRTK 308
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 759 FLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
L+S +AG LGLN+ A VI+ D WNP + QA DRAHRIGQ +
Sbjct: 510 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTR 555
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 56/327 (17%)
Query: 377 LRSYQIEGLQW-MLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEY-----KGVTGPHL 430
L YQ E L W + + GILADEMG+GKTIQ ISL+ E + G L
Sbjct: 134 LLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTL 193
Query: 431 IVAPKAVLPNWMNEFS--TWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLIM 488
++ P L W++E S T S + + Y G ++ K L +YD ++
Sbjct: 194 VLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQK------------LMNYDFVL 241
Query: 489 RDKAF-----------------LKKIHWLYLIVDEGHRLKNHECALAR---TLDSSYHIQ 528
L I W +IVDE H +KN A+ L+++Y
Sbjct: 242 TTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATY--- 298
Query: 529 RRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDW--FNAPFADRVDVSLTDEEQLL 586
R L+GTP+QN + EL+SL+++ + F S + + + FA V V +L
Sbjct: 299 -RWALSGTPLQNDVDELYSLVSYSFLNFFYSTYASFAFRHTHITFARNVTVKFLIGGNIL 357
Query: 587 ---IIRRLHQVIRPFILRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQ--QVTDVGRVG 641
I R+ V I+ ++ L GK + L + + + Y+ + T G +
Sbjct: 358 PLSIPVRIENVPAVLIM-----QINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQ 412
Query: 642 LATGSGKSKSLQNLTMQLRKCCNHPYL 668
T + L ++LR+ +HPYL
Sbjct: 413 AGTLMNNYAHIFGLLIRLRQAVDHPYL 439
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 705 RVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNA-PDSPYFMFLLST 763
+ ++FSQ T +D++ L ++L GS + + L+ F PD + L+S
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCR--VLLMSL 584
Query: 764 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+AGG+ LNL A V + D WNP +++QA+DR HRIGQ K
Sbjct: 585 QAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCK 625
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 81/349 (23%)
Query: 384 GLQWML---SLFNNNLNGILADEMGLGKTIQTISLIA----------------------- 417
L WM + N GILAD+ GLGKT+ TI+LI
Sbjct: 549 ALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSD 608
Query: 418 --------------HLMEYKG-VTGPHLIVAPKAVLPNWMNEF---STWAPSIKTILYDG 459
L + +G LIV P +++ W +E T + ++Y G
Sbjct: 609 HSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHG 668
Query: 460 RMDERKAMKEELSGEGKFNVLLTHYDLIMRDKAF-----------LKKIHWLYLIVDEGH 508
R EL+ K++V++T Y L+ + K L ++ W +++DE
Sbjct: 669 C--SRTKDPHELA---KYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFRVVLDEAQ 723
Query: 509 RLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFN 568
+KN++ A S H +RR L+GTPIQNS+ +L+S FL ++S F +
Sbjct: 724 SIKNYK-TQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIK 782
Query: 569 APFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK-----FLPGKSQVILKCDM 623
P + S E + L +++ +LRR K+ + LP KS + + D
Sbjct: 783 NPIS-----SYPGEG----YKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDF 833
Query: 624 SAWQKVYYQQVT----DVGRVGLATGSGKSKSLQNLTM--QLRKCCNHP 666
+ ++ +Y ++ D + G+ K + L M +LR+ C HP
Sbjct: 834 TKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 702 AGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNA-PDSPYFMFL 760
AG + ++F+Q T+++D+LE L+ ++ R DG R + +Q FN PD + +
Sbjct: 1070 AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPD--VSVMI 1127
Query: 761 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+S +A LGLN+ A VI+ D WNP + QA DRAHRIGQ +
Sbjct: 1128 MSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTR 1171
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 189/462 (40%), Gaps = 81/462 (17%)
Query: 399 ILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSI-----K 453
I++ + G GKT T+ + ++ + P +++AP ++ W +E W +I
Sbjct: 613 IISHKAGTGKTRLTVVFLQSYLKRFPNSHP-MVIAPATLMRTWEDEVRKWNVNIPFYNMN 671
Query: 454 TILYDGRMDERKAMKEELSGEGKFNVL-LTHYDLIMRDKAFLKKIHWLY----------- 501
++ G D + L G N + + + K+ L + LY
Sbjct: 672 SLQLSGYEDAEAVSR--LEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEG 729
Query: 502 --------------LIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWS 547
L++DEGH +N + + L + ++R+ L+GT QN+ +EL +
Sbjct: 730 MQVFRRMLVELPGLLVLDEGHTPRNQSSLIWKVL-TEVRTEKRIFLSGTLFQNNFKELSN 788
Query: 548 LLNFLLP----SIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 603
+L P +I + +H RV+ EE ++ L +I F+ +
Sbjct: 789 VLCLARPADKDTISSRIHELSKCSQEGEHGRVN-----EENRIV--DLKAMIAHFVHVHE 841
Query: 604 KNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCC 663
+++ LPG ++ + QK ++ S++ +L
Sbjct: 842 GTILQESLPGLRDCVVVLNPPFQQKKILDRID------------TSQNTFEFEHKLSAVS 889
Query: 664 NHPYLFVGDYDMYRHKEEIIRASGKFELLDRLLPK-------------LRRAG---HRVL 707
HP L++ KE+++ L RL K +R +G +VL
Sbjct: 890 VHPSLYLCCNPT--KKEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFIRISGTVKEKVL 947
Query: 708 LFSQ-MTRLMDILEIYLRLHDY----KFLRLDGSTKTEERGSLLQKFNAPDSPYFMFLLS 762
++SQ + L I+E + D+ + L + G + +R ++ FN PDS + L S
Sbjct: 948 VYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLAS 1007
Query: 763 TRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
T+A G++L A V+I D WNP ++ QA RA RIGQK+
Sbjct: 1008 TKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKR 1049
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 702 AGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNA-PDSPYFMFL 760
AG + ++F+Q T+++D+LE L+ ++ R DG R + +Q FN PD + +
Sbjct: 1113 AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPD--VSVMI 1170
Query: 761 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+S +A LGLN+ A VI+ D WNP + QA DRAHRIGQ +
Sbjct: 1171 MSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTR 1214
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 494 LKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLL 553
L ++ W +++DE +KN++ A S H +RR L+GTPIQNS+ +L+S FL
Sbjct: 752 LAQVSWFRVVLDEAQSIKNYK-TQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLK 810
Query: 554 PSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK---- 609
++S F + P + S E + L +++ +LRR K+ +
Sbjct: 811 YDPYSSYQTFCETIKNPIS-----SYPGEG----YKTLQAILKKVMLRRTKDTLLDGKPV 861
Query: 610 -FLPGKSQVILKCDMSAWQKVYYQQVT----DVGRVGLATGSGKSKSLQNLTM--QLRKC 662
LP KS + + D + ++ +Y ++ D + G+ K + L M +LR+
Sbjct: 862 ISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQA 921
Query: 663 CNHP 666
C HP
Sbjct: 922 CGHP 925
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 707 LLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPD-SPYFMFLLSTRA 765
++FSQ +++ +LE L+ + LRLDG+ ++R ++ +F P+ + + L S +A
Sbjct: 710 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 769
Query: 766 GGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
G G+NL A V +FD WNP +++QA DR HRIGQK+
Sbjct: 770 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQ 808
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 146/345 (42%), Gaps = 35/345 (10%)
Query: 430 LIVAPKAVLPNWMNEFS--TWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
LIV P +V+ W+ + T +K +Y G ER EL K++++LT Y +
Sbjct: 342 LIVCPPSVISAWITQLEEHTVPGILKVYMYHG--GERTDDVNELM---KYDIVLTTYGTL 396
Query: 488 MRDKAF----LKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQ 543
++++ +KK+ WL +I+DE H +KN +R + RR +TGTPIQN
Sbjct: 397 AVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVV-CKLKASRRWAVTGTPIQNGSF 455
Query: 544 ELWSLLNFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 603
+L+SL+ FL F+ ++ P L+ RL ++ LRR
Sbjct: 456 DLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLS---------RLQVLMATISLRRT 506
Query: 604 KNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQ-------NLT 656
K + LP K+ ++S ++ Y + + G+ + SL ++
Sbjct: 507 KEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAK-GVVQNLINNGSLMRNYSTVLSII 565
Query: 657 MQLRKCCNHPYLFVGDYDMYRHKEEIIRASGKFELLDRLLPKLRRAG--HRVLLFSQMTR 714
++LR+ C+ L + + + + K ELL +L+ L+ + S T
Sbjct: 566 LRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTN 625
Query: 715 LM--DILEIYLRLHDYKFLRLDGSTKTEERGSLLQK--FNAPDSP 755
++ I+ R + L+ RGSL Q +NAP P
Sbjct: 626 IIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPP 670
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 699 LRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFM 758
++ AG + ++FSQ T+++++LE L ++ RLDG+ R +Q FN M
Sbjct: 961 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVM 1020
Query: 759 FLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
++S +A LGLN+ A V++ D WNP + QA DRAHRIGQ +
Sbjct: 1021 -IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTR 1065
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 21/193 (10%)
Query: 494 LKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLL 553
L K+ W +++DE +KN++ +AR +RR L+GTPIQNS+ +L+S FL
Sbjct: 624 LAKVSWFRVVLDEAQSIKNYKTQVARAC-WGLRAKRRWCLSGTPIQNSIDDLYSYFRFLK 682
Query: 554 PSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK---- 609
++S F P + ++L +++ +LRR K +
Sbjct: 683 YDPYSSYVLFCSTIKNPIT---------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPI 733
Query: 610 -FLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGL----ATGSGKSKSLQNLTM--QLRKC 662
LP KS + K D + ++ +Y ++ R G+ K + L M +LR+
Sbjct: 734 ISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQA 793
Query: 663 CNHPYLFVGDYDM 675
C+HP L G+Y
Sbjct: 794 CDHPLLVNGEYSF 806
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 699 LRRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNA-PDSPYF 757
++ AG + ++FSQ T+++++LE L ++ RLDG+ R +Q FN P+
Sbjct: 1119 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPE--VT 1176
Query: 758 MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+ ++S +A LGLN+ A V++ D WNP + QA DRAHRIGQ +
Sbjct: 1177 VMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTR 1223
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 494 LKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLL 553
L K+ W +++DE +KN++ +AR +RR L+GTPIQNS+ +L+S FL
Sbjct: 782 LAKVSWFRVVLDEAQSIKNYKTQVARAC-WGLRAKRRWCLSGTPIQNSIDDLYSYFRFLK 840
Query: 554 PSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK---- 609
++S F P + ++L +++ +LRR K +
Sbjct: 841 YDPYSSYVLFCSTIKNPIT---------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPI 891
Query: 610 -FLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGL----ATGSGKSKSLQNLTM--QLRKC 662
LP KS + K D + ++ +Y ++ R G+ K + L M +LR+
Sbjct: 892 ISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQA 951
Query: 663 CNHPYLFVGDY 673
C+HP L G+Y
Sbjct: 952 CDHPLLVNGEY 962
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 705 RVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKF-NAPDSPYFMFLLST 763
+ ++FSQ T ++D++E+ L + +F RLDG+ R +++F N PD + ++S
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPD--VKVMIMSL 885
Query: 764 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+AG LGLN+ A VI+ D WNP + QA DRAHRIGQ +
Sbjct: 886 KAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTR 926
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 490 DKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLL 549
D L K+ W +++DE +KNH +AR +RR L+GTPIQN++ +L+S
Sbjct: 462 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARAC-CGLRAKRRWCLSGTPIQNTIDDLYSYF 520
Query: 550 NFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK 609
FL + +F P + L ++L V+R +LRR K +
Sbjct: 521 RFLKYDPYAVYKSFCHQIKGPIS---------RNSLQGYKKLQAVLRAIMLRRTKGTLLD 571
Query: 610 F-----LPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLATGSGKSKSLQN------LTMQ 658
LP K+ + + D S ++ +Y ++ R + QN + ++
Sbjct: 572 GQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLR 631
Query: 659 LRKCCNHPYLF 669
LR+ C+HP L
Sbjct: 632 LRQACDHPQLV 642
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 700 RRAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNA-PDSPYFM 758
R + ++FSQ T +D++ L ++L GS R + + KF PD +
Sbjct: 677 RDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCR--V 734
Query: 759 FLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
FL+S +AGG+ LNL A V + D WNP +++QA+DR HRIGQ K
Sbjct: 735 FLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYK 780
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 77/172 (44%), Gaps = 39/172 (22%)
Query: 326 DSPLDEDVDLIDSDYNGDTSDLLEGQRQYNSAIHSIQEKVTEQPSILQGGELRSYQIEGL 385
D + EDVDL Q+N+ I + E PS L LR YQ E L
Sbjct: 109 DEHMSEDVDL----------------DQHNAVI----AETAEPPSDLIMPLLR-YQKEFL 147
Query: 386 QWMLSLFNNNLNGILADEMGLGKTIQTISLI--------AHLMEYKGVTGPHLIVAPKAV 437
W + GILADEMG+GKTIQ ISL+ A E G T L++ P
Sbjct: 148 AWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCT---LVLCPLVA 204
Query: 438 LPNWMNEFS--TWAPSIKTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLI 487
+ W+NE + T S K ++Y G K +KE ++ ++ +LT Y +
Sbjct: 205 VSQWLNEIARFTSPGSTKVLVYHG-AKRAKNIKEFMN----YDFVLTTYSTV 251
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 705 RVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNA-PDSPYFMFLLST 763
+ ++FSQ T ++D++E+ + +F RLDG+ R +++F+ PD + L+S
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPD--VKVMLMSL 951
Query: 764 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+AG LGLN+ A VI+ D WNP + QA DRAHRIGQ +
Sbjct: 952 KAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTR 992
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 490 DKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLL 549
D L K+ W +++DE +KN+ +AR+ + +RR L+GTPIQN++ +L+S
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSC-CTLRAKRRWCLSGTPIQNTIDDLYSYF 591
Query: 550 NFLLPSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK 609
FL + +F P + ++L V+R +LRR K +
Sbjct: 592 RFLRYDPYAVYKSFYSTIKVPIS---------RNSCQGYKKLQAVLRAIMLRRTKGTLLD 642
Query: 610 F-----LPGKSQVILKCDMSAWQKVYYQQVTDVGRV---GLATGSGKSKSLQNL---TMQ 658
LP K + + D S ++ +Y+++ R A S++ N+ ++
Sbjct: 643 GKPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLR 702
Query: 659 LRKCCNHPYLF 669
LR+ C+HP L
Sbjct: 703 LRQACDHPQLV 713
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 195/492 (39%), Gaps = 94/492 (19%)
Query: 393 NNNLNG-ILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPS 451
+ N+ G +++ G GKT I+ + ++ P L++APK L W EF W
Sbjct: 707 SGNIGGCVISHSPGAGKTFLIIAFLTSYLKLFPGKRP-LVLAPKTTLYTWYKEFIKWEIP 765
Query: 452 I-----------------KTILYDGRMDERKAMKEELSGEGKF-------NVLL---THY 484
+ KT+ ++G + + L K +VL+ T +
Sbjct: 766 VPVHLIHGRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSF 825
Query: 485 DLIMRDKAFLKKIHWLY-----------LIVDEGHRLKNHECALARTLDSSYHIQRRLLL 533
+MR+ + K H Y L++DEGH ++ + L + L R+LL
Sbjct: 826 TTLMREDS--KFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKAL-MKVGTDLRILL 882
Query: 534 TGTPIQNSLQELWSLLNFLLPSIFNSV------------------HNFED----WFNAPF 571
+GT QN+ E ++ L P + V H E+ F
Sbjct: 883 SGTLFQNNFCEYFNTLCLARPKFIHEVLMELDQKFKTNHGVNKAPHLLENRARKLFLDII 942
Query: 572 ADRVDVSLTDEEQLLIIRRLHQVIRPFI--LRRKKNEVEKFLPGKSQVILKCDMSAWQKV 629
A ++D S+ DE +L + L + FI + LPG L + + Q
Sbjct: 943 AKKIDASVGDE-RLQGLNMLKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQHK 1001
Query: 630 YYQQVTDVGRVGLATGSGKSKSLQNLTMQLRKCCNHPYLFVGD------------YDMYR 677
++ DV + T G ++ +Q+ HP+L ++ +
Sbjct: 1002 ILTKLQDV----IKTYFGYPLEVE---LQITLAAIHPWLVTSSNCCTKFFNPQELSEIGK 1054
Query: 678 HKEEIIRASGKFELLDRLLPKLRRAGHRVLLFSQ-MTRLMDILEIYLRLHDYK----FLR 732
K + + S +L+ + ++R ++L+F + + E++ + ++ L
Sbjct: 1055 LKHDAKKGSKVMFVLNLIFRVVKR--EKILIFCHNIAPIRMFTELFENIFRWQRGREILT 1112
Query: 733 LDGSTKTEERGSLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 792
L G + ERG ++ KF P +P + L S A G++L A VI+ DS+WNP +Q
Sbjct: 1113 LTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQ 1172
Query: 793 AEDRAHRIGQKK 804
A RA R GQ+K
Sbjct: 1173 AIARAFRPGQQK 1184
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 193/479 (40%), Gaps = 82/479 (17%)
Query: 399 ILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKAVLPNWMNEFSTWAPSIKTILYD 458
+++ G GKT I+ +A ++ P L++APK L W EF W + L
Sbjct: 709 VVSHTPGAGKTFLIIAFLASYLKIFPGKRP-LVLAPKTTLYTWYKEFIKWEIPVPVHLLH 767
Query: 459 GR----MDERKAMKEELSGEGKFNVL--LTHYD-----------LIMRDKAFL------- 494
GR M + K ++ E + +V+ L D L+M +FL
Sbjct: 768 GRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDS 827
Query: 495 KKIHWLY-----------LIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQ 543
K H Y L++DEGH ++ + L + L R+LL+GT QN+
Sbjct: 828 KFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKAL-MKVDTDLRILLSGTLFQNNFC 886
Query: 544 ELWSLLNFLLPSIFNSV------------------HNFED----WFNAPFADRVDVSLTD 581
E ++ L P + V H E+ +F A ++D + D
Sbjct: 887 EYFNTLCLARPKFVHEVLVELDKKFQTNQAEQKAPHLLENRARKFFLDIIAKKIDTKVGD 946
Query: 582 EEQLLIIRRLHQVIRPFI--LRRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGR 639
E +L + L + FI + LPG L + + V ++ +T +
Sbjct: 947 E-RLQGLNMLRNMTSGFIDNYEGSGSGSGDVLPGLQIYTLLMNST---DVQHKSLTKLQN 1002
Query: 640 VGLATGSGKSKSLQNLT---------MQLRKCCNHPYLFVGDYDMYRHKEEIIRASGKFE 690
+ ++T G L+ L ++ CC + ++ + K + + S
Sbjct: 1003 I-MSTYHGYPLELELLITLAAIHPWLVKTTTCCAKFFNPQELLEIEKLKHDAKKGSKVMF 1061
Query: 691 LLDRLLPKLRRAGHRVLLFSQ-MTRLMDILEIYLRLHDYK----FLRLDGSTKTEERGSL 745
+L+ + ++R ++L+F + + LE++ + +K L L G + ERG +
Sbjct: 1062 VLNLVFRVVKR--EKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRV 1119
Query: 746 LQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKK 804
+ KF P + L S A G++L A VI+ DS+WNP +QA RA R GQ+K
Sbjct: 1120 IDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQK 1178
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 21/193 (10%)
Query: 494 LKKIHWLYLIVDEGHRLKNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLL 553
L K+ W +++DE +KN++ +AR +RR L+GTPIQNS+ +L+S FL
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARAC-WGLRAKRRWCLSGTPIQNSIDDLYSYFRFLK 847
Query: 554 PSIFNSVHNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKNEVEK---- 609
++S F P + ++L +++ +LRR K +
Sbjct: 848 YDPYSSYVLFCSTIKNPIT---------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPI 898
Query: 610 -FLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGL----ATGSGKSKSLQNLTM--QLRKC 662
LP KS + K D + ++ +Y ++ R G+ K + L M +LR+
Sbjct: 899 ISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQA 958
Query: 663 CNHPYLFVGDYDM 675
C+HP L G+Y
Sbjct: 959 CDHPLLVNGEYSF 971
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 651 SLQNLTMQLRKCCNHPY--------LFVGDYDMYRHKEEIIRASGKFELLDRLLPKLRRA 702
+L+ +RK C+HPY L + +++ + I+ASGK LLD++L +++
Sbjct: 515 ALEETLNSVRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKN 574
Query: 703 GHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERG-------SLLQKFNAPDSP 755
G + ++F Q T+ + L + L D+ R K+ E G S + FN +S
Sbjct: 575 GLKAVVFYQATQTPEGLLLGNILEDFVGQRF--GPKSYEHGIYSSKKNSAINNFNK-ESQ 631
Query: 756 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 790
+ LL TRA + L AD I+F S NP D
Sbjct: 632 CCVLLLETRACSQTIKLLRADAFILFGSSLNPSHD 666
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 651 SLQNLTMQLRKCCNHPY--------LFVGDYDMYRHKEEIIRASGKFELLDRLLPKLRRA 702
+L+ +RK C+HPY L + +++ + I+ASGK LLD++L +++
Sbjct: 515 ALEETLNSVRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKN 574
Query: 703 GHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERG-------SLLQKFNAPDSP 755
G + ++F Q T+ + L + L D+ R K+ E G S + FN +S
Sbjct: 575 GLKAVVFYQATQTPEGLLLGNILEDFVGQRF--GPKSYEHGIYSSKKNSAINNFNK-ESQ 631
Query: 756 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 790
+ LL TRA + L AD I+F S NP D
Sbjct: 632 CCVLLLETRACSQTIKLLRADAFILFGSSLNPSHD 666
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 377 LRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPHLIVAPKA 436
L +Q++GL++ L +ADEMGLGKT+Q I++ + G L+V P
Sbjct: 204 LLPFQLDGLRFGL---RRGGRCFIADEMGLGKTLQAIAIAGCFIS----EGSILVVCPAV 256
Query: 437 VLPNWMNEFSTWAPSI---KTILYDGRMDERKAMKEELSGEGKFNVLLTHYDLIMRDKAF 493
+ W E W PS L G D + V++ Y ++ +
Sbjct: 257 LRFTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPRWP------KVVVISYKMLQHLRTT 310
Query: 494 LKKIHWLYLIVDEGHRL-----KNHECALARTLDSSYHIQRRLLLTGTPIQNSLQELWSL 548
+ + W LIVDE H L K+ + LD + ++ +LL+GTP + +++
Sbjct: 311 MLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSRPFDIFHQ 370
Query: 549 LNFLLPSIF 557
+N L P +
Sbjct: 371 INMLWPGLL 379
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 701 RAGHRVLLFSQMTRLMDILEIYLRLHDYKFLRLDGSTKTEERGSLLQKFNAPDSPYFMFL 760
R+ ++++F+ +++D ++ ++ F+R+DG+T +R +Q F S + +
Sbjct: 552 RSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQF-SSEVKIAI 610
Query: 761 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQ 802
+ AGG+GL+ A V+ + P + QAEDRAHR GQ
Sbjct: 611 IGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQ 652
>AT2G40770.1 | Symbols: | zinc ion binding;DNA
binding;helicases;ATP binding;nucleic acid binding |
chr2:17013535-17021315 REVERSE LENGTH=1664
Length = 1664
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 68/296 (22%)
Query: 426 TGPHLIVAPKAVLPNWMNEFS--TWAPSIKTILYDGRMDERKAMKEE----LSGEGKFNV 479
TG LIV P +LP W +E + T S+ T +Y+G + ++ EE ++ ++
Sbjct: 499 TGATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRN--ASLSEEPMIDITELLNADI 556
Query: 480 LLTHYDLIMRDKAF------------------------LKKIHWLYLIVDEGHRLKNHEC 515
+LT YD++ D L +I W + +DE ++++
Sbjct: 557 VLTTYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAA 616
Query: 516 ALARTLDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPSIFNSVHNFEDWFNAPFADRV 575
A A + + + R +TGTPIQ L +L+ LL FL + F+ + + P+ +R
Sbjct: 617 A-ATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPY-ERR 674
Query: 576 DVSLTDEEQLLIIRRLHQVIRPFILRRKKNEV--EKFLPGKSQVILKCDMSAWQKVYYQQ 633
D + H+ + + R K V E LP + + + SA ++ +Y +
Sbjct: 675 DTK--------AMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSR 726
Query: 634 VTDV-------------------GRVG----LATGSGKSKSLQNLTMQLRKCCNHP 666
D G L T + +K L +L ++LR+ C HP
Sbjct: 727 QHDTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSL-LKLRQACCHP 781