Miyakogusa Predicted Gene

Lj1g3v0016520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0016520.1 tr|B9HEY9|B9HEY9_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_217237
PE=3,36.36,7e-16, ,CUFF.25279.1
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63940.1 | Symbols:  | Protein kinase protein with adenine nu...    60   1e-09

>AT5G63940.1 | Symbols:  | Protein kinase protein with adenine
           nucleotide alpha hydrolases-like domain |
           chr5:25588254-25591229 FORWARD LENGTH=705
          Length = 705

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 16/137 (11%)

Query: 54  ENPLAMVPYQKLDGDDDACSYSITVGDSKQSKPGWSFLRQVF-HPRKHSPKSSMKNSFVL 112
           +N LA+VP Q  + D            S +S PGW FLR ++ + RK   K S K + VL
Sbjct: 222 DNLLALVPVQTNETDSG----------SLESGPGWHFLRGLYGNNRKSWTKVSAKKA-VL 270

Query: 113 QRA--LPSYHSSAVVHPDDK--EVTIEQNDGSTLDGVSGAIVPFGSTSILPAPSFCSDLN 168
           Q    L   HS  V++ D K  +   +++  S++DG   +I  FGS  +    S     N
Sbjct: 271 QWVSRLRGRHSETVIYLDRKRSDSGCDEDCSSSIDGEDVSISRFGSELMQSPLSPFIGSN 330

Query: 169 SLPDELMGLQEKYSSSC 185
           ++P+EL GL EKYSS+C
Sbjct: 331 NIPEELEGLHEKYSSTC 347