Miyakogusa Predicted Gene
- Lj1g3v0013390.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0013390.2 Non Chatacterized Hit- tr|B9RYJ2|B9RYJ2_RICCO DNA
repair and recombination protein RAD54B, putative
,76.56,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.25270.2
(851 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 1174 0.0
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 1147 0.0
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 260 4e-69
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 257 3e-68
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 257 3e-68
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 257 3e-68
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 253 3e-67
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 246 6e-65
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 232 1e-60
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 228 1e-59
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 225 1e-58
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 224 2e-58
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 204 2e-52
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 204 2e-52
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 204 2e-52
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 202 1e-51
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 201 1e-51
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 201 1e-51
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 201 2e-51
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 201 2e-51
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 201 2e-51
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 198 2e-50
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 198 2e-50
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 194 1e-49
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 194 2e-49
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 194 2e-49
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 193 5e-49
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 193 5e-49
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 192 6e-49
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 179 8e-45
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 175 9e-44
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 172 9e-43
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 134 2e-31
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 124 3e-28
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 119 9e-27
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 119 9e-27
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 118 2e-26
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 118 2e-26
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 111 2e-24
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 100 5e-21
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 98 2e-20
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 96 1e-19
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 95 2e-19
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 95 2e-19
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 95 2e-19
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 94 4e-19
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 93 8e-19
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 78 2e-14
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 77 7e-14
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 76 1e-13
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 74 4e-13
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 74 5e-13
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 74 5e-13
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 72 2e-12
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 72 2e-12
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 69 1e-11
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 56 1e-07
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/837 (70%), Positives = 673/837 (80%), Gaps = 32/837 (3%)
Query: 16 VASCSSDSDDLEVEQRKSQNVEALIGGNLIVKRQSLLPRVLRV-EGAAVCRKPFKPPSSK 74
V S SSD+D RKS+NV+ L+ GNL+V+RQ LLPRVL V +GAAVCRKPFKPP S
Sbjct: 42 VVSLSSDAD------RKSKNVKDLLRGNLVVQRQPLLPRVLSVSDGAAVCRKPFKPPCSH 95
Query: 75 PYNHQ-DLTRRLSARKRFVPWRSSPIPRPPXXXXXXXXXXXXXXDVAEDDEHLPPEIDPL 133
Y+ L+RRLSARKRFVPW SS P D E+ LPP+I+PL
Sbjct: 96 GYDSTGQLSRRLSARKRFVPWGSS-TPVVVALPTKLEASTNIERDEEEEVVCLPPDIEPL 154
Query: 134 VLWHPQHCEDGASTSNLTTISVVPLLVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILA 193
VLW + EDG SN+TTI V +LV+FLRPHQREGVQFMFDCV+GL + NI+GCILA
Sbjct: 155 VLWQSE--EDG--MSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILA 210
Query: 194 DDMGLGKTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVA 253
DDMGLGKTLQSITLLYTLL QGFDG PMV+KAIIVTPTSLVSNWEAEIKKWVG+R++L+A
Sbjct: 211 DDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIA 270
Query: 254 LCESTREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKND 313
LCESTR+DV+SGI +FT PRS LQVLI+SYETFRMHSSKF EAHRLKND
Sbjct: 271 LCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKND 330
Query: 314 QTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICG 373
QT+TNRALA+L CKRRVLLSGTP+QNDLEEFFAMVNFTNPG LGD AHFR YYEAPIICG
Sbjct: 331 QTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICG 390
Query: 374 REPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLY 433
REPTAT EEK L+A+R+ ELS+KVNQFILRRTNALLSNHLPPKI++VVCCK+T LQS LY
Sbjct: 391 REPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLY 450
Query: 434 KHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFF 493
HF+ SKN+KRA+ + KQ+K+LAYITALKKLCNHPKLIYDT++SG+PGT GFE+C+ FF
Sbjct: 451 NHFISSKNLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFF 510
Query: 494 PPEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQL 553
P EM SGRSG+WTGG+GAWVELSGK+ VL+RLLA+LR +T+DRIVLVSNYTQTLDLFAQL
Sbjct: 511 PAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQL 570
Query: 554 CREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFD 613
CRE+RYP LRLDG+T+ISKRQKLVN ND +KDEF FLLSSKAGGCGLNLIG NRLVLFD
Sbjct: 571 CRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFD 630
Query: 614 PDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDS 673
PDWNPAN KQAAARVWRDGQKKRVY+YRFLS GTIEEKVYQRQMSKEGLQKVIQ EQTD+
Sbjct: 631 PDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDN 690
Query: 674 LLEQGNFLSTEDLRDLFTFDENLKSEIHEKMRCSRCRIIDEPQSSDVLSTIVNSESDE-- 731
QGN LSTEDLRDLF+F +++SEIHEKM CSRC+ ++ ++ + + D+
Sbjct: 691 STRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQ--NDASGTENIEEGNENNVDDNA 748
Query: 732 ---ETSDIGGFAEIAGCLENLKGSEKQIGTPLEEDLSSWGHHFSPTSVPDPILQASAGDE 788
+ DIGGFA+ AGC LK SE+Q+GTPLEEDL SWGHHF+ SVPD ILQASAGDE
Sbjct: 749 CQIDQEDIGGFAKDAGCFNLLKNSERQVGTPLEEDLGSWGHHFTSKSVPDAILQASAGDE 808
Query: 789 VTFVFTNQVNGKLVPMESIISRQLEQKEP------------NKPRQNIKQKFTPLKL 833
VTFVFTNQV+GKLVP+ES +S + + E NKP+Q ++ PL L
Sbjct: 809 VTFVFTNQVDGKLVPIESNVSPKTVESEEHNRNQPVNKRAFNKPQQRPREPLQPLSL 865
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/837 (69%), Positives = 667/837 (79%), Gaps = 34/837 (4%)
Query: 16 VASCSSDSDDLEVEQRKSQNVEALIGGNLIVKRQSLLPRVLRV-EGAAVCRKPFKPPSSK 74
V S SSD+D RKS+NV+ L+ GNL+V+RQ LLPRVL V +GAAVCRKPFKPP S
Sbjct: 42 VVSLSSDAD------RKSKNVKDLLRGNLVVQRQPLLPRVLSVSDGAAVCRKPFKPPCSH 95
Query: 75 PYNHQ-DLTRRLSARKRFVPWRSSPIPRPPXXXXXXXXXXXXXXDVAEDDEHLPPEIDPL 133
Y+ L+RRLSARKRFVPW SS P D E+ LPP+I+PL
Sbjct: 96 GYDSTGQLSRRLSARKRFVPWGSS-TPVVVALPTKLEASTNIERDEEEEVVCLPPDIEPL 154
Query: 134 VLWHPQHCEDGASTSNLTTISVVPLLVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILA 193
VLW + EDG SN+TTI V +LV+FLRPHQREGVQFMFDCV+GL + NI+GCILA
Sbjct: 155 VLWQSE--EDG--MSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILA 210
Query: 194 DDMGLGKTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVA 253
DDMGLGKTLQSITLLYTLL QGFDG PMV+KAIIVTPTSLVSNWEAEIKKWVG+R++L+A
Sbjct: 211 DDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIA 270
Query: 254 LCESTREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKND 313
LCESTR+DV+SGI +FT PRS LQVLI+SYETFRMHSSKF EAHRLKND
Sbjct: 271 LCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKND 330
Query: 314 QTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICG 373
QT+TNRALA+L CKRRVLLSGTP+QNDLEEFFAMVNFTNPG LGD AHFR YYEAPIICG
Sbjct: 331 QTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICG 390
Query: 374 REPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLY 433
REPTAT EEK L+A+R+ ELS+KVNQFILRRTNALLSNHLPPKI++VVCCK+T LQ+ Y
Sbjct: 391 REPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQT-TY 449
Query: 434 KHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFF 493
L +KRA+ + KQ+K+LAYITALKKLCNHPKLIYDT++SG+PGT GFE+C+ FF
Sbjct: 450 NGCL-CMQLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFF 508
Query: 494 PPEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQL 553
P EM SGRSG+WTGG+GAWVELSGK+ VL+RLLA+LR +T+DRIVLVSNYTQTLDLFAQL
Sbjct: 509 PAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQL 568
Query: 554 CREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFD 613
CRE+RYP LRLDG+T+ISKRQKLVN ND +KDEF FLLSSKAGGCGLNLIG NRLVLFD
Sbjct: 569 CRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFD 628
Query: 614 PDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDS 673
PDWNPAN KQAAARVWRDGQKKRVY+YRFLS GTIEEKVYQRQMSKEGLQKVIQ EQTD+
Sbjct: 629 PDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDN 688
Query: 674 LLEQGNFLSTEDLRDLFTFDENLKSEIHEKMRCSRCRIIDEPQSSDVLSTIVNSESDE-- 731
QGN LSTEDLRDLF+F +++SEIHEKM CSRC+ ++ ++ + + D+
Sbjct: 689 STRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQ--NDASGTENIEEGNENNVDDNA 746
Query: 732 ---ETSDIGGFAEIAGCLENLKGSEKQIGTPLEEDLSSWGHHFSPTSVPDPILQASAGDE 788
+ DIGGFA+ AGC LK SE+Q+GTPLEEDL SWGHHF+ SVPD ILQASAGDE
Sbjct: 747 CQIDQEDIGGFAKDAGCFNLLKNSERQVGTPLEEDLGSWGHHFTSKSVPDAILQASAGDE 806
Query: 789 VTFVFTNQVNGKLVPMESIISRQLEQKEP------------NKPRQNIKQKFTPLKL 833
VTFVFTNQV+GKLVP+ES +S + + E NKP+Q ++ PL L
Sbjct: 807 VTFVFTNQVDGKLVPIESNVSPKTVESEEHNRNQPVNKRAFNKPQQRPREPLQPLSL 863
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 260 bits (664), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 192/644 (29%), Positives = 323/644 (50%), Gaps = 78/644 (12%)
Query: 150 LTTISVVPLL-------VRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTL 202
L++I +P++ R L HQREGV+FM++ N HG IL DDMGLGKT+
Sbjct: 120 LSSIGEIPIIHVPASINCRLLE-HQREGVKFMYNLYK------NNHGGILGDDMGLGKTI 172
Query: 203 QSITLLYTLLSQGFD-GKPMVRKA-----IIVTPTSLVSNWEAEIKKWVGERVRLVALCE 256
Q+I L + + D G+ + ++ +I+ P+S++ NWE+E +W ++
Sbjct: 173 QTIAFLAAVYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRWAS-FFKVSVYHG 231
Query: 257 STREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTI 316
S R+ ++ + ++VL+ S++TFR+ EAHRLKN+++
Sbjct: 232 SNRDMILEKL-----KARGVEVLVTSFDTFRIQGP-VLSGINWEIVIADEAHRLKNEKSK 285
Query: 317 TNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREP 376
A + K+R+ L+GT +QN + E F + + PG LG HFR +Y+ P+ G+
Sbjct: 286 LYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRA 345
Query: 377 TATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHL-PPKIVQVVCCKLTPLQSDLYKH 435
TA +++ +R L + + +++LRRT HL K VV C+++ LQ +Y+
Sbjct: 346 TAPERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQR 405
Query: 436 FLQSKNVKRAINEE--------LKQSK------------------------------ILA 457
+Q ++ +N++ LKQS+ +L
Sbjct: 406 MIQLPEIQCLVNKDNPCACGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLP 465
Query: 458 YITALKKLCNHPKLIYDTLRS---GSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVE 514
+ L+++ NH +LI + + F + ++L G S S + + + V+
Sbjct: 466 CLMKLQQISNHLELIKPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLSDVK 525
Query: 515 LSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQ 574
GK++ L +L+A + D+I+L S + LD+ + + Y RLDG+T + RQ
Sbjct: 526 HCGKMRALEKLMASWISK-GDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQ 584
Query: 575 KLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQK 634
LV+ FN S + VFL+S+KAGG GLNL+ NR+V+FDP+WNP++ QA R +R GQK
Sbjct: 585 SLVDDFN-ASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQK 643
Query: 635 KRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFTFDE 694
+ V ++R LSAG++EE VY RQ+ K+ L + + ++ +G E +LF
Sbjct: 644 RHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEFQGELFGI-S 702
Query: 695 NLKSEIHEKMRCS------RCRIIDEPQSSDVLSTIVNSESDEE 732
NL ++ +K+ S R IDE + +L T V+ + EE
Sbjct: 703 NLFRDLSDKLFTSDIVELHRDSNIDENKKRSLLETGVSEDEKEE 746
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 287/598 (47%), Gaps = 81/598 (13%)
Query: 163 LRPHQREGVQFMFD----CVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 218
L+ HQ G++FM++ ++ + S GCILA MGLGKT Q I LYT + G
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 219 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERV---RLVALCESTREDVVSGIGNFTSPRSN 275
++ A+IVTP +++ NW +E +KW+ V R+ L + +RE T R
Sbjct: 779 ---LKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRE---RRFDLLTKWRKK 832
Query: 276 LQVLIVSYETFRMHSSKFXXXXXXXXXXX-------------XEAHRLKNDQTITNRALA 322
V ++ Y FR S EAH +KN + T +AL
Sbjct: 833 GGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALK 892
Query: 323 ALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEE 382
+ C+RR+ L+G+PLQN+L E++ MV+F G LG FR ++ PI G+ +T E+
Sbjct: 893 QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAED 952
Query: 383 KKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNV 442
K+ +R+ L ++ F+ R ++ LPPK V V+ KL+PLQ LY+ FL+
Sbjct: 953 VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGF 1012
Query: 443 KRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRS 502
+E + A L ++ NHP + LRS +G I P + S +
Sbjct: 1013 SDGRTDERMRKNFFAAYQVLAQILNHPGI--PQLRS-EDSKNGRRGSIVDIPDDCSSDEN 1069
Query: 503 GSWTGGNGA--------------------WVEL-----------SGKLQVLARLLAHLRE 531
+ G WV+L SGK+ +L +L+ +
Sbjct: 1070 IDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS-MSA 1128
Query: 532 RTNDRIVLVSNYTQTLDLFA-QLCREQRYPH-----------LRLDGTTSISKRQKLVNC 579
D+ ++ S TLDL L R R+ R+DG T S+RQKLV+
Sbjct: 1129 DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDR 1188
Query: 580 FND-TSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVY 638
FN+ +K L+S++AG G+NL NR+++ D WNP QA R WR GQKK V+
Sbjct: 1189 FNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVF 1248
Query: 639 IYRFLSAGTIEEKVYQRQMSKEGL-QKVIQREQTDSLLEQGNFLSTEDLRDLFTFDEN 695
YR ++ GTIEEK+Y+RQ++KEGL +V+ R+Q +S E++ LF FD++
Sbjct: 1249 AYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFDDD 1300
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 287/598 (47%), Gaps = 81/598 (13%)
Query: 163 LRPHQREGVQFMFD----CVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 218
L+ HQ G++FM++ ++ + S GCILA MGLGKT Q I LYT + G
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 219 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERV---RLVALCESTREDVVSGIGNFTSPRSN 275
++ A+IVTP +++ NW +E +KW+ V R+ L + +RE T R
Sbjct: 779 ---LKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRE---RRFDLLTKWRKK 832
Query: 276 LQVLIVSYETFRMHSSKFXXXXXXXXXXX-------------XEAHRLKNDQTITNRALA 322
V ++ Y FR S EAH +KN + T +AL
Sbjct: 833 GGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALK 892
Query: 323 ALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEE 382
+ C+RR+ L+G+PLQN+L E++ MV+F G LG FR ++ PI G+ +T E+
Sbjct: 893 QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAED 952
Query: 383 KKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNV 442
K+ +R+ L ++ F+ R ++ LPPK V V+ KL+PLQ LY+ FL+
Sbjct: 953 VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGF 1012
Query: 443 KRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRS 502
+E + A L ++ NHP + LRS +G I P + S +
Sbjct: 1013 SDGRTDERMRKNFFAAYQVLAQILNHPGI--PQLRS-EDSKNGRRGSIVDIPDDCSSDEN 1069
Query: 503 GSWTGGNGA--------------------WVEL-----------SGKLQVLARLLAHLRE 531
+ G WV+L SGK+ +L +L+ +
Sbjct: 1070 IDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS-MSA 1128
Query: 532 RTNDRIVLVSNYTQTLDLFA-QLCREQRYPH-----------LRLDGTTSISKRQKLVNC 579
D+ ++ S TLDL L R R+ R+DG T S+RQKLV+
Sbjct: 1129 DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDR 1188
Query: 580 FND-TSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVY 638
FN+ +K L+S++AG G+NL NR+++ D WNP QA R WR GQKK V+
Sbjct: 1189 FNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVF 1248
Query: 639 IYRFLSAGTIEEKVYQRQMSKEGL-QKVIQREQTDSLLEQGNFLSTEDLRDLFTFDEN 695
YR ++ GTIEEK+Y+RQ++KEGL +V+ R+Q +S E++ LF FD++
Sbjct: 1249 AYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFDDD 1300
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 287/598 (47%), Gaps = 81/598 (13%)
Query: 163 LRPHQREGVQFMFD----CVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 218
L+ HQ G++FM++ ++ + S GCILA MGLGKT Q I LYT + G
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 219 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERV---RLVALCESTREDVVSGIGNFTSPRSN 275
++ A+IVTP +++ NW +E +KW+ V R+ L + +RE T R
Sbjct: 779 ---LKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRE---RRFDLLTKWRKK 832
Query: 276 LQVLIVSYETFRMHSSKFXXXXXXXXXXX-------------XEAHRLKNDQTITNRALA 322
V ++ Y FR S EAH +KN + T +AL
Sbjct: 833 GGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALK 892
Query: 323 ALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEE 382
+ C+RR+ L+G+PLQN+L E++ MV+F G LG FR ++ PI G+ +T E+
Sbjct: 893 QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAED 952
Query: 383 KKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNV 442
K+ +R+ L ++ F+ R ++ LPPK V V+ KL+PLQ LY+ FL+
Sbjct: 953 VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGF 1012
Query: 443 KRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRS 502
+E + A L ++ NHP + LRS +G I P + S +
Sbjct: 1013 SDGRTDERMRKNFFAAYQVLAQILNHPGI--PQLRS-EDSKNGRRGSIVDIPDDCSSDEN 1069
Query: 503 GSWTGGNGA--------------------WVEL-----------SGKLQVLARLLAHLRE 531
+ G WV+L SGK+ +L +L+ +
Sbjct: 1070 IDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS-MSA 1128
Query: 532 RTNDRIVLVSNYTQTLDLFA-QLCREQRYPH-----------LRLDGTTSISKRQKLVNC 579
D+ ++ S TLDL L R R+ R+DG T S+RQKLV+
Sbjct: 1129 DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDR 1188
Query: 580 FND-TSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVY 638
FN+ +K L+S++AG G+NL NR+++ D WNP QA R WR GQKK V+
Sbjct: 1189 FNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVF 1248
Query: 639 IYRFLSAGTIEEKVYQRQMSKEGL-QKVIQREQTDSLLEQGNFLSTEDLRDLFTFDEN 695
YR ++ GTIEEK+Y+RQ++KEGL +V+ R+Q +S E++ LF FD++
Sbjct: 1249 AYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFDDD 1300
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 285/590 (48%), Gaps = 86/590 (14%)
Query: 163 LRPHQREGVQFMFD----CVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 218
L+ HQ G++FM++ ++ + S GCILA MGLGKT Q I LYT + G
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 219 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERV---RLVALCESTR-----EDVVSGIGNFT 270
++ A+IVTP +++ NW +E +KW+ V R+ L + +R E G+ +
Sbjct: 779 ---LKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRYKFFYERNFWGVKDLN 835
Query: 271 SPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRV 330
+ R L + EAH +KN + T +AL + C+RR+
Sbjct: 836 AARGICNALRDGPDIL----------------VCDEAHIIKNTKADTTQALKQVKCQRRI 879
Query: 331 LLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERT 390
L+G+PLQN+L E++ MV+F G LG FR ++ PI G+ +T E+ K+ +R+
Sbjct: 880 ALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRS 939
Query: 391 TELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEEL 450
L ++ F+ R ++ LPPK V V+ KL+PLQ LY+ FL+ +E
Sbjct: 940 HILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGFSDGRTDER 999
Query: 451 KQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNG 510
+ A L ++ NHP + LRS +G I P + S + + G
Sbjct: 1000 MRKNFFAAYQVLAQILNHPGI--PQLRS-EDSKNGRRGSIVDIPDDCSSDENIDYNMVTG 1056
Query: 511 A--------------------WVEL-----------SGKLQVLARLLAHLRERTNDRIVL 539
WV+L SGK+ +L +L+ + D+ ++
Sbjct: 1057 EKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS-MSADVGDKALV 1115
Query: 540 VSNYTQTLDLFA-QLCREQRYPH-----------LRLDGTTSISKRQKLVNCFND-TSKD 586
S TLDL L R R+ R+DG T S+RQKLV+ FN+ +K
Sbjct: 1116 FSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKR 1175
Query: 587 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAG 646
L+S++AG G+NL NR+++ D WNP QA R WR GQKK V+ YR ++ G
Sbjct: 1176 VKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARG 1235
Query: 647 TIEEKVYQRQMSKEGL-QKVIQREQTDSLLEQGNFLSTEDLRDLFTFDEN 695
TIEEK+Y+RQ++KEGL +V+ R+Q +S E++ LF FD++
Sbjct: 1236 TIEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFDDD 1279
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 246 bits (628), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 177/622 (28%), Positives = 285/622 (45%), Gaps = 96/622 (15%)
Query: 159 LVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 218
+ R L +QR GVQ++++ C G I+ D+MGLGKT+Q ++ L +L
Sbjct: 381 IFRKLFDYQRVGVQWLWEL---HCQRA---GGIIGDEMGLGKTIQVLSFLGSL-----HF 429
Query: 219 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTS------- 271
M + +II+ P +L+ W E +KW + V + + +D G G +
Sbjct: 430 SKMYKPSIIICPVTLLRQWRREAQKWYPDF--HVEILHDSAQDSGHGKGQGKASESDYDS 487
Query: 272 ---------PRSN----------------LQVLIVSYETFRMHSSKFXXXXXXXXXXXXE 306
P+S +LI +YE R+ K E
Sbjct: 488 ESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLD-E 546
Query: 307 AHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYY 366
HR++N + L R++++G P+QN L E +++ +F PG LG + F +
Sbjct: 547 GHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEF 606
Query: 367 EAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLT 426
PI G A+ + + L + ++LRR A ++ HL K V+ C LT
Sbjct: 607 SVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLT 666
Query: 427 PLQSDLYKHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGF 486
Q Y+ FL S V++ + L I ++K+CNHP L+ +P
Sbjct: 667 VEQRSTYRAFLASSEVEQIFD---GNRNSLYGIDVMRKICNHPDLLEREHSHQNPD---- 719
Query: 487 EDCIRFFPPEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQT 546
+ PE SGK++V+A +L +++ + R++L S Q
Sbjct: 720 -----YGNPER------------------SGKMKVVAEVLKVWKQQGH-RVLLFSQTQQM 755
Query: 547 LDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGG 606
LD+ Y + R+DG T + +R L++ FN+ S+D FVF+L++K GG G NL G
Sbjct: 756 LDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNN-SEDMFVFVLTTKVGGLGTNLTGA 814
Query: 607 NRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGL-QKV 665
NR+++FDPDWNP+N QA R WR GQKK V +YR ++ GTIEEKVY RQ+ K L K+
Sbjct: 815 NRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKI 874
Query: 666 IQREQTDSLLEQGNFLSTEDLRDLFTFDE-----------NLKSEIHEKMRCSRCRIIDE 714
++ Q Q F D++DLF + N+ S++ E++ + +
Sbjct: 875 LKNPQ------QRRFFKARDMKDLFILKDDGDSNASTETSNIFSQLAEEINIVGVQSDKK 928
Query: 715 PQSSDVLSTIVNSESDEETSDI 736
P+S L+ +E E +D+
Sbjct: 929 PESDTQLALHKTAEGSSEQTDV 950
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 232 bits (591), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 244/509 (47%), Gaps = 52/509 (10%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLL-YTLLSQGFDGKPM 221
LR +Q EG+Q+M N++G ILAD+MGLGKT+Q+I+L+ Y L ++G G
Sbjct: 403 LRSYQLEGLQWMVSLFNN-----NLNG-ILADEMGLGKTIQTISLIAYLLENKGVPGP-- 454
Query: 222 VRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLIV 281
+IV P +++ NW E WV + A R + I + VLI
Sbjct: 455 ---YLIVAPKAVLPNWVNEFATWVPS---IAAFLYDGRLEERKAIREKIAGEGKFNVLIT 508
Query: 282 SYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQT-ITNRALAALPCKRRVLLSGTPLQND 340
Y+ M F E HRLKN ++ + L KRR+LL+GTP+QN
Sbjct: 509 HYDLI-MRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNS 567
Query: 341 LEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQF 400
L+E ++++NF P I + +F ++ AP + T EE+ L R L + F
Sbjct: 568 LQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHR---LHHVIRPF 624
Query: 401 ILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELKQSKILAYIT 460
ILRR + LP K ++ C ++ Q YK V + +SK L +T
Sbjct: 625 ILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRV--GLQTGSGKSKSLQNLT 682
Query: 461 A-LKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVELSGKL 519
L+K CNHP L D + PE+ V SGK
Sbjct: 683 MQLRKCCNHPYLFVGG------------DYNMWKKPEI---------------VRASGKF 715
Query: 520 QVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNC 579
++L RLL LR + RI+L S T+ +D+ Y +LRLDGTT +R L+
Sbjct: 716 ELLDRLLPKLR-KAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQ 774
Query: 580 FNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYI 639
FN+ F+FLLS++AGG GLNL + +++FD DWNP +QA R R GQKK V +
Sbjct: 775 FNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRV 834
Query: 640 YRFLSAGTIEEKVYQRQMSKEGLQ-KVIQ 667
+ +S G++EE + +R K G+ KVIQ
Sbjct: 835 FVLVSVGSVEEVILERAKQKMGIDAKVIQ 863
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 228 bits (582), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 269/565 (47%), Gaps = 68/565 (12%)
Query: 159 LVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 218
+ L PHQREG+ +++ G IL DDMGLGKT+Q + L L
Sbjct: 373 IATMLYPHQREGLNWLWSL------HTQGKGGILGDDMGLGKTMQICSFLAGLFHS---- 422
Query: 219 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSN--- 275
++++A++V P +L+ +W E+ V L + TRE G T R
Sbjct: 423 -KLIKRALVVAPKTLLPHWMKELA--------TVGLSQMTRE----YYGTSTKAREYDLH 469
Query: 276 --LQ---VLIVSYETFRMHSSKFXXXXXXXXXXXX-----------EAHRLKNDQTITNR 319
LQ +L+ +Y+ R ++ E H +KN T +
Sbjct: 470 HILQGKGILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAK 529
Query: 320 ALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTAT 379
+L +P R+++SGTP+QN+L+E +A+ NF+ PG+LGD F++ YE I+ G + AT
Sbjct: 530 SLLEIPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNAT 589
Query: 380 TEEKKLSAERTTELSAKVNQFILRRTNALL------SNHLPPKIVQVVCCKLTPLQSDLY 433
E+++ + L + F LRR + + ++ L K VV +LT Q LY
Sbjct: 590 DREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLY 649
Query: 434 KHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCI--- 490
+ FL S+ V A + LA +T LKK+C+HP L+ T R+ G + +
Sbjct: 650 EAFLNSEIVLSAFD-----GSPLAALTILKKICDHPLLL--TKRAAEDVLEGMDSTLTQE 702
Query: 491 RFFPPEMLSGRSGSWTGGNGAWVE---LSGKLQVLARLLAHLRERTNDRIVLVSNYTQTL 547
E L+ + + +S KL + LL +L + R+++ S + L
Sbjct: 703 EAGVAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGH-RVLIFSQTRKML 761
Query: 548 DLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGN 607
+L Y LR+DGTT R K V F + +FLL+S+ GG GL L +
Sbjct: 762 NLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAP-IFLLTSQVGGLGLTLTKAD 820
Query: 608 RLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQ 667
R+++ DP WNP+ Q+ R +R GQ K V +YR +++ T+EEK+Y++Q+ K GL K
Sbjct: 821 RVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTAT 880
Query: 668 REQTDSLLEQGNFLSTEDLRDLFTF 692
+ EQ + S +DLR+LF+
Sbjct: 881 EHK-----EQIRYFSQQDLRELFSL 900
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 185/633 (29%), Positives = 298/633 (47%), Gaps = 83/633 (13%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMV 222
LR +Q EG+ F+ + S N ILAD+MGLGKT+QS+++L L + P
Sbjct: 625 LRDYQLEGLNFLVN------SWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPF- 677
Query: 223 RKAIIVTPTSLVSNWEAEIKKWV-GERVRLVALCESTREDVVSGIGNFTSPRS-----NL 276
++V P S ++NW E +KW+ G + + ++RE V F + +
Sbjct: 678 ---LVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASRE--VCQQYEFYNEKKVGRPIKF 732
Query: 277 QVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTP 336
L+ +YE + EAHRLKN + AL K ++L++GTP
Sbjct: 733 NALLTTYEVV-LKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTP 791
Query: 337 LQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSA- 395
LQN +EE +A+++F +PG + F Y K LS+ +EL+
Sbjct: 792 LQNSVEELWALLHFLDPGKFKNKDEFVENY----------------KNLSSFNESELANL 835
Query: 396 --KVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELK-- 451
++ ILRR + LPPKI +++ +++PLQ YK L+ +N +N+ ++
Sbjct: 836 HLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILE-RNF-HDLNKGVRGN 893
Query: 452 QSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGA 511
Q +L + LKK CNHP L S G G + +LS
Sbjct: 894 QVSLLNIVVELKKCCNHPFL----FESADHGYGGDINDNSKLDKIILS------------ 937
Query: 512 WVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSIS 571
SGKL +L +LL LRE T R+++ S + LD+ A+ + + RLDG+T
Sbjct: 938 ----SGKLVILDKLLVRLRE-TKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAE 992
Query: 572 KRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRD 631
RQ+ ++ FN + D+F FLLS++AGG G+NL + +V+FD DWNP N QA +R R
Sbjct: 993 LRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRI 1052
Query: 632 GQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQK-VIQREQTDSLLE-----QGNFLSTED 685
GQ++ V IYRF+++ ++EE++ +R K L VIQ+ + LE +G+ +
Sbjct: 1053 GQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNE 1112
Query: 686 LRDLFTF--DENLKSEIHEKMRCSRCRIIDEPQSSDVLSTIVNSESDEETSDIGGFAEIA 743
L + F +E K + +++ R +D + + + +DE ++ G ++A
Sbjct: 1113 LSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEQVEEKHTDETEHELLGAFKVA 1172
Query: 744 GCLENLKGSEKQIGTPLEEDLSSWGHHFSPTSV 776
E+D S W P SV
Sbjct: 1173 NFCN------------AEDDGSFWSRWIKPDSV 1193
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 248/511 (48%), Gaps = 57/511 (11%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMV 222
LR +Q EG+Q+M N + ILAD+MGLGKT+Q+I L+ LL + K +
Sbjct: 386 LRSYQLEGLQWMVSLYN------NDYNGILADEMGLGKTIQTIALIAYLL----ESKDLH 435
Query: 223 RKAIIVTPTSLVSNWEAEIKKWVGE-RVRLVALCESTREDVVSGIGNFTSPRSNLQVLIV 281
+I+ P +++ NWE E W L + R ++ + I VLI
Sbjct: 436 GPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAG-----GKFNVLIT 490
Query: 282 SYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALA-ALPCKRRVLLSGTPLQND 340
Y+ M F E HRLKN + + L KRR+LL+GTP+QN
Sbjct: 491 HYDLI-MRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNS 549
Query: 341 LEEFFAMVNFTNPGILGDIAHFRRYYEAPII-CGREPTATTEEKKLSAERTTELSAKVNQ 399
L+E ++++NF P I I +F ++ P CG + T EE+ L R L +
Sbjct: 550 LQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECG-SASLTDEEELLIINR---LHHVIRP 605
Query: 400 FILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKR-AINEELKQSKILAY 458
F+LRR + + LP K ++ C ++ Q YK Q +V R ++ +SK L
Sbjct: 606 FLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYK---QVTDVGRVGLHSGNGKSKSLQN 662
Query: 459 ITA-LKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVELSG 517
+T L+K CNHP L + + C + PE+ V SG
Sbjct: 663 LTMQLRKCCNHPYLFV---------GADYNMCKK---PEI---------------VRASG 695
Query: 518 KLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLV 577
K ++L RLL L+ + RI+L S T+ +DL Y +LRLDG+T +R L+
Sbjct: 696 KFELLDRLLPKLK-KAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILL 754
Query: 578 NCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRV 637
FN+ F+FLLS++AGG GLNL + +++FD DWNP +QA R R GQKK V
Sbjct: 755 KQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEV 814
Query: 638 YIYRFLSAGTIEEKVYQRQMSKEGLQ-KVIQ 667
++ +S G+IEE + +R K G+ KVIQ
Sbjct: 815 RVFVLVSIGSIEEVILERAKQKMGIDAKVIQ 845
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 204 bits (520), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 143 DGASTSNLTTISVVPLLVRF-LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKT 201
DG + S T + P ++ +R +Q G+ ++ I+G ILAD+MGLGKT
Sbjct: 168 DGLTGSGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYEN-----GING-ILADEMGLGKT 221
Query: 202 LQSITLL-YTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKW--VGERVRLVALCES- 257
LQ+I+LL Y +G +G MV V P S + NW EI+++ V V+ + E
Sbjct: 222 LQTISLLAYLHEYRGINGPHMV-----VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEER 276
Query: 258 --TREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQT 315
RED++ G F ++ ++ I R S ++ EAHR+KN+ +
Sbjct: 277 RHIREDLLVA-GKFDICVTSFEMAIKEKTALRRFSWRYIIID--------EAHRIKNENS 327
Query: 316 ITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGRE 375
+ ++ + R+L++GTPLQN+L E +A++NF P I F +++ I G
Sbjct: 328 LLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQ---ISGEN 384
Query: 376 PTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKH 435
E +L + F+LRR + + LPPK ++ ++ +Q YK
Sbjct: 385 D---------QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 435
Query: 436 FLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPP 495
LQ K+++ A+N ++ ++L L+K CNHP L + PG PP
Sbjct: 436 LLQ-KDLE-AVNAGGERKRLLNIAMQLRKCCNHPYL----FQGAEPG-----------PP 478
Query: 496 EMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCR 555
+T G+ + +GK+ +L +LL L+ER + R+++ S T+ LD+
Sbjct: 479 ---------YTTGD-HLITNAGKMVLLDKLLPKLKER-DSRVLIFSQMTRLLDILEDYLM 527
Query: 556 EQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 615
+ Y + R+DG T +R + +N ++FVFLLS++AGG G+NL + ++L+D D
Sbjct: 528 YRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSD 587
Query: 616 WNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVI 666
WNP QA R R GQKK V ++RF + IEEKV +R K L ++
Sbjct: 588 WNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALV 638
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 204 bits (520), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 143 DGASTSNLTTISVVPLLVRF-LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKT 201
DG + S T + P ++ +R +Q G+ ++ I+G ILAD+MGLGKT
Sbjct: 168 DGLTGSGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYEN-----GING-ILADEMGLGKT 221
Query: 202 LQSITLL-YTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKW--VGERVRLVALCES- 257
LQ+I+LL Y +G +G MV V P S + NW EI+++ V V+ + E
Sbjct: 222 LQTISLLAYLHEYRGINGPHMV-----VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEER 276
Query: 258 --TREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQT 315
RED++ G F ++ ++ I R S ++ EAHR+KN+ +
Sbjct: 277 RHIREDLLVA-GKFDICVTSFEMAIKEKTALRRFSWRYIIID--------EAHRIKNENS 327
Query: 316 ITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGRE 375
+ ++ + R+L++GTPLQN+L E +A++NF P I F +++ I G
Sbjct: 328 LLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQ---ISGEN 384
Query: 376 PTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKH 435
E +L + F+LRR + + LPPK ++ ++ +Q YK
Sbjct: 385 D---------QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 435
Query: 436 FLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPP 495
LQ K+++ A+N ++ ++L L+K CNHP L + PG PP
Sbjct: 436 LLQ-KDLE-AVNAGGERKRLLNIAMQLRKCCNHPYL----FQGAEPG-----------PP 478
Query: 496 EMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCR 555
+T G+ + +GK+ +L +LL L+ER + R+++ S T+ LD+
Sbjct: 479 ---------YTTGD-HLITNAGKMVLLDKLLPKLKER-DSRVLIFSQMTRLLDILEDYLM 527
Query: 556 EQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 615
+ Y + R+DG T +R + +N ++FVFLLS++AGG G+NL + ++L+D D
Sbjct: 528 YRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSD 587
Query: 616 WNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVI 666
WNP QA R R GQKK V ++RF + IEEKV +R K L ++
Sbjct: 588 WNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALV 638
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 204 bits (520), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 143 DGASTSNLTTISVVPLLVRF-LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKT 201
DG + S T + P ++ +R +Q G+ ++ I+G ILAD+MGLGKT
Sbjct: 168 DGLTGSGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYEN-----GING-ILADEMGLGKT 221
Query: 202 LQSITLL-YTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKW--VGERVRLVALCES- 257
LQ+I+LL Y +G +G MV V P S + NW EI+++ V V+ + E
Sbjct: 222 LQTISLLAYLHEYRGINGPHMV-----VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEER 276
Query: 258 --TREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQT 315
RED++ G F ++ ++ I R S ++ EAHR+KN+ +
Sbjct: 277 RHIREDLLVA-GKFDICVTSFEMAIKEKTALRRFSWRYIIID--------EAHRIKNENS 327
Query: 316 ITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGRE 375
+ ++ + R+L++GTPLQN+L E +A++NF P I F +++ I G
Sbjct: 328 LLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQ---ISGEN 384
Query: 376 PTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKH 435
E +L + F+LRR + + LPPK ++ ++ +Q YK
Sbjct: 385 D---------QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKA 435
Query: 436 FLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPP 495
LQ K+++ A+N ++ ++L L+K CNHP L + PG PP
Sbjct: 436 LLQ-KDLE-AVNAGGERKRLLNIAMQLRKCCNHPYL----FQGAEPG-----------PP 478
Query: 496 EMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCR 555
+T G+ + +GK+ +L +LL L+ER + R+++ S T+ LD+
Sbjct: 479 ---------YTTGD-HLITNAGKMVLLDKLLPKLKER-DSRVLIFSQMTRLLDILEDYLM 527
Query: 556 EQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPD 615
+ Y + R+DG T +R + +N ++FVFLLS++AGG G+NL + ++L+D D
Sbjct: 528 YRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSD 587
Query: 616 WNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVI 666
WNP QA R R GQKK V ++RF + IEEKV +R K L ++
Sbjct: 588 WNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALV 638
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/563 (26%), Positives = 257/563 (45%), Gaps = 91/563 (16%)
Query: 158 LLVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFD 217
L L P+Q EG+ F+ + H ILAD+MGLGKT+QSI LL +L +
Sbjct: 268 FLKGLLHPYQLEGLNFL-----RFSWSKQTH-VILADEMGLGKTIQSIALLASLFEEN-- 319
Query: 218 GKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVV-------------- 263
+ +++ P S + NWE E W + ++ + V+
Sbjct: 320 ----LIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKI 375
Query: 264 --SGIGNFTS----PRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTIT 317
G +S R VL+ SYE + S+ E HRLKN +
Sbjct: 376 KKKKSGQISSESKQKRIKFDVLLTSYEMINLDSA-VLKPIKWECMIVDEGHRLKNKDSKL 434
Query: 318 NRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPT 377
+L R+LL+GTPLQN+L+E F +++F + G G + F+ ++
Sbjct: 435 FSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD--------- 485
Query: 378 ATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFL 437
+E+++S L + +LRR + +PPK ++ L+ LQ + YK
Sbjct: 486 -INQEEQIS-----RLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIF 539
Query: 438 QSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEM 497
++N + + Q + + L+K+C HP ++ G E I
Sbjct: 540 -TRNYQVLTKKGGAQISLNNIMMELRKVCCHPYML-----------EGVEPVIH------ 581
Query: 498 LSGRSGSWTGGNGAWVEL---SGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLC 554
N A+ +L GKLQ+L +++ L+E+ + R+++ + + LDL C
Sbjct: 582 ---------DANEAFKQLLESCGKLQLLDKMMVKLKEQGH-RVLIYTQFQHMLDLLEDYC 631
Query: 555 REQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDP 614
+++ + R+DG ++RQ ++ FN + ++F FLLS++AGG G+NL + ++++D
Sbjct: 632 THKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDS 691
Query: 615 DWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKV--------- 665
DWNP QA AR R GQ +V IYR ++ GTIEE++ Q K L+ +
Sbjct: 692 DWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQN 751
Query: 666 IQREQTDSLLEQGN---FLSTED 685
I +E+ D ++ G+ F S +D
Sbjct: 752 INQEELDDIIRYGSKELFASEDD 774
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/567 (28%), Positives = 267/567 (47%), Gaps = 64/567 (11%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQ--GFDGKP 220
LR +Q+EG+ ++ G +HG IL DDMGLGKTLQ+ ++ + ++ G +
Sbjct: 1451 LRRYQQEGINWL-----GFLKRFKLHG-ILCDDMGLGKTLQASAIVASDAAERRGSTDEL 1504
Query: 221 MVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLI 280
V +IIV P++LV +W EI+K++ + V + +D VS F +N V+I
Sbjct: 1505 DVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF----NNHNVII 1560
Query: 281 VSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQND 340
SY+ R + E H +KN ++ A+ L + R++LSGTP+QN+
Sbjct: 1561 TSYDVVR-KDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNN 1619
Query: 341 LEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQF 400
+ E +++ +F PG LG F+ Y P++ R+P + ++ + L +V F
Sbjct: 1620 IMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPF 1679
Query: 401 ILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELK--------- 451
+LRRT + + LP KI+Q C L+P+Q LY+ F + K+ I+ +K
Sbjct: 1680 LLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQF-SGSSAKQEISSIIKVDGSADSGN 1738
Query: 452 --------QSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSG 503
+ + + L KLC+HP L+ + P S M++G S
Sbjct: 1739 ADVAPTKASTHVFQALQYLLKLCSHPLLVLGD-KVTEPVASDL--------AAMINGCSD 1789
Query: 504 SWTGGNGAWVELSGKLQVLARLL--------AHLRERT----NDRIVLVSNYTQTLDLFA 551
T + V+ S KL L +L A + T R+++ + + LD+
Sbjct: 1790 IITELHK--VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIE 1847
Query: 552 Q---LCREQRYPHLRLDGTTSISKRQKLVNCFN-DTSKDEFVFLLSSKAGGCGLNLIGGN 607
+ + ++RLDG+ KR ++V FN D + D V LL++ GG GLNL +
Sbjct: 1848 KDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTID--VLLLTTHVGGLGLNLTSAD 1905
Query: 608 RLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQ 667
LV + DWNP QA R R GQK+ V ++R + GT+EEKV Q K + +
Sbjct: 1906 TLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1965
Query: 668 REQTDSLLEQGNFLSTEDLRDLFTFDE 694
+ S+ ++T+ L DLF E
Sbjct: 1966 NAENASM----KTMNTDQLLDLFASAE 1988
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/567 (28%), Positives = 267/567 (47%), Gaps = 64/567 (11%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQ--GFDGKP 220
LR +Q+EG+ ++ G +HG IL DDMGLGKTLQ+ ++ + ++ G +
Sbjct: 1482 LRRYQQEGINWL-----GFLKRFKLHG-ILCDDMGLGKTLQASAIVASDAAERRGSTDEL 1535
Query: 221 MVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLI 280
V +IIV P++LV +W EI+K++ + V + +D VS F +N V+I
Sbjct: 1536 DVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF----NNHNVII 1591
Query: 281 VSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQND 340
SY+ R + E H +KN ++ A+ L + R++LSGTP+QN+
Sbjct: 1592 TSYDVVR-KDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNN 1650
Query: 341 LEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQF 400
+ E +++ +F PG LG F+ Y P++ R+P + ++ + L +V F
Sbjct: 1651 IMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPF 1710
Query: 401 ILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELK--------- 451
+LRRT + + LP KI+Q C L+P+Q LY+ F + K+ I+ +K
Sbjct: 1711 LLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQF-SGSSAKQEISSIIKVDGSADSGN 1769
Query: 452 --------QSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSG 503
+ + + L KLC+HP L+ + P S M++G S
Sbjct: 1770 ADVAPTKASTHVFQALQYLLKLCSHPLLVLGD-KVTEPVASDL--------AAMINGCSD 1820
Query: 504 SWTGGNGAWVELSGKLQVLARLL--------AHLRERT----NDRIVLVSNYTQTLDLFA 551
T + V+ S KL L +L A + T R+++ + + LD+
Sbjct: 1821 IITELHK--VQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIE 1878
Query: 552 Q---LCREQRYPHLRLDGTTSISKRQKLVNCFN-DTSKDEFVFLLSSKAGGCGLNLIGGN 607
+ + ++RLDG+ KR ++V FN D + D V LL++ GG GLNL +
Sbjct: 1879 KDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTID--VLLLTTHVGGLGLNLTSAD 1936
Query: 608 RLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQ 667
LV + DWNP QA R R GQK+ V ++R + GT+EEKV Q K + +
Sbjct: 1937 TLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1996
Query: 668 REQTDSLLEQGNFLSTEDLRDLFTFDE 694
+ S+ ++T+ L DLF E
Sbjct: 1997 NAENASM----KTMNTDQLLDLFASAE 2019
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 231/511 (45%), Gaps = 58/511 (11%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIH-GCILADDMGLGKTLQSITLLYTLLSQGFDGKPM 221
LR +Q G+++ L S N H ILAD+MGLGKT+Q I+L+ L+ D P
Sbjct: 754 LREYQMNGLRW-------LVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPF 806
Query: 222 VRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCEST-------REDVVSGIGNFTSPRS 274
++V P+S++ W++EI W + + C + +E +V
Sbjct: 807 ----LVVVPSSVLPGWQSEINFWA-PSIHKIVYCGTPDERRKLFKEQIV---------HQ 852
Query: 275 NLQVLIVSYETF-RMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLS 333
VL+ +YE H E HR+KN N L R+LL+
Sbjct: 853 KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLT 912
Query: 334 GTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAER--TT 391
GTPLQN+LEE +A++NF P I F +++ P E +A
Sbjct: 913 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIIN 972
Query: 392 ELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELK 451
L + F+LRR + N LP KI +++ C+ + Q L K N+ N K
Sbjct: 973 RLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRV--EDNLGSIGN--AK 1028
Query: 452 QSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGA 511
+ + L+ +CNHP L L S E+ P L
Sbjct: 1029 SRAVHNSVMELRNICNHPYL--SQLHS--------EEVNNIIPKHFLP-----------P 1067
Query: 512 WVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSIS 571
V L GKL++L R+L L+ T+ R++ S T+ LD+ + Y +LRLDG TS
Sbjct: 1068 IVRLCGKLEMLDRMLPKLK-ATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGG 1126
Query: 572 KRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRD 631
R L++ FN + F+FLLS +AGG G+NL + ++LFD DWNP QA AR R
Sbjct: 1127 DRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRI 1186
Query: 632 GQKKRVYIYRFLSAGTIEEKVYQRQMSKEGL 662
GQKK V + RF + ++EE+V K G+
Sbjct: 1187 GQKKDVLVLRFETVNSVEEQVRASAEHKLGV 1217
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 231/511 (45%), Gaps = 58/511 (11%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIH-GCILADDMGLGKTLQSITLLYTLLSQGFDGKPM 221
LR +Q G+++ L S N H ILAD+MGLGKT+Q I+L+ L+ D P
Sbjct: 754 LREYQMNGLRW-------LVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPF 806
Query: 222 VRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCEST-------REDVVSGIGNFTSPRS 274
++V P+S++ W++EI W + + C + +E +V
Sbjct: 807 ----LVVVPSSVLPGWQSEINFWA-PSIHKIVYCGTPDERRKLFKEQIV---------HQ 852
Query: 275 NLQVLIVSYETF-RMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLS 333
VL+ +YE H E HR+KN N L R+LL+
Sbjct: 853 KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLT 912
Query: 334 GTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAER--TT 391
GTPLQN+LEE +A++NF P I F +++ P E +A
Sbjct: 913 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIIN 972
Query: 392 ELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELK 451
L + F+LRR + N LP KI +++ C+ + Q L K N+ N K
Sbjct: 973 RLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRV--EDNLGSIGN--AK 1028
Query: 452 QSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGA 511
+ + L+ +CNHP L L S E+ P L
Sbjct: 1029 SRAVHNSVMELRNICNHPYL--SQLHS--------EEVNNIIPKHFLP-----------P 1067
Query: 512 WVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSIS 571
V L GKL++L R+L L+ T+ R++ S T+ LD+ + Y +LRLDG TS
Sbjct: 1068 IVRLCGKLEMLDRMLPKLK-ATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGG 1126
Query: 572 KRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRD 631
R L++ FN + F+FLLS +AGG G+NL + ++LFD DWNP QA AR R
Sbjct: 1127 DRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRI 1186
Query: 632 GQKKRVYIYRFLSAGTIEEKVYQRQMSKEGL 662
GQKK V + RF + ++EE+V K G+
Sbjct: 1187 GQKKDVLVLRFETVNSVEEQVRASAEHKLGV 1217
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 231/511 (45%), Gaps = 58/511 (11%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIH-GCILADDMGLGKTLQSITLLYTLLSQGFDGKPM 221
LR +Q G+++ L S N H ILAD+MGLGKT+Q I+L+ L+ D P
Sbjct: 754 LREYQMNGLRW-------LVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPF 806
Query: 222 VRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCEST-------REDVVSGIGNFTSPRS 274
++V P+S++ W++EI W + + C + +E +V
Sbjct: 807 ----LVVVPSSVLPGWQSEINFWA-PSIHKIVYCGTPDERRKLFKEQIV---------HQ 852
Query: 275 NLQVLIVSYETF-RMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLS 333
VL+ +YE H E HR+KN N L R+LL+
Sbjct: 853 KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLT 912
Query: 334 GTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAER--TT 391
GTPLQN+LEE +A++NF P I F +++ P E +A
Sbjct: 913 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIIN 972
Query: 392 ELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELK 451
L + F+LRR + N LP KI +++ C+ + Q L K N+ N K
Sbjct: 973 RLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRV--EDNLGSIGN--AK 1028
Query: 452 QSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGA 511
+ + L+ +CNHP L L S E+ P L
Sbjct: 1029 SRAVHNSVMELRNICNHPYL--SQLHS--------EEVNNIIPKHFLP-----------P 1067
Query: 512 WVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSIS 571
V L GKL++L R+L L+ T+ R++ S T+ LD+ + Y +LRLDG TS
Sbjct: 1068 IVRLCGKLEMLDRMLPKLK-ATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGG 1126
Query: 572 KRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRD 631
R L++ FN + F+FLLS +AGG G+NL + ++LFD DWNP QA AR R
Sbjct: 1127 DRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRI 1186
Query: 632 GQKKRVYIYRFLSAGTIEEKVYQRQMSKEGL 662
GQKK V + RF + ++EE+V K G+
Sbjct: 1187 GQKKDVLVLRFETVNSVEEQVRASAEHKLGV 1217
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 247/510 (48%), Gaps = 66/510 (12%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLL-YTLLSQGFDGKPM 221
LR +Q G+ ++ I+G ILAD+MGLGKTLQ+I+LL Y +G +G M
Sbjct: 194 LRDYQLAGLNWLIRLYEN-----GING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHM 247
Query: 222 VRKAIIVTPTSLVSNWEAEIKKW--VGERVRLVALCES---TREDVVSGIGNFTSPRSNL 276
V V P S + NW EI+++ V V+ + E RE+++ G F ++
Sbjct: 248 V-----VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVA-GKFDICVTSF 301
Query: 277 QVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTP 336
++ I T R S ++ EAHR+KN+ ++ ++ + R+L++GTP
Sbjct: 302 EMAIKEKTTLRRFSWRYIIID--------EAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 337 LQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAK 396
LQN+L E +A++NF P + F +++ I G E +L
Sbjct: 354 LQNNLHELWALLNFLLPEVFSSAETFDEWFQ---ISGEND---------QQEVVQQLHKV 401
Query: 397 VNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELKQSKIL 456
+ F+LRR + + LPPK ++ ++ +Q YK LQ K+++ +N ++ ++L
Sbjct: 402 LRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ-KDLE-VVNGGGERKRLL 459
Query: 457 AYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVELS 516
L+K CNHP L + PG PP +T G+ V +
Sbjct: 460 NIAMQLRKCCNHPYL----FQGAEPG-----------PP---------YTTGD-HLVTNA 494
Query: 517 GKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKL 576
GK+ VL L + + R+++ S T+ LD+ + Y + R+DG T +R
Sbjct: 495 GKM-VLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDAS 553
Query: 577 VNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKR 636
+ +N ++FVFLLS++AGG G+NL + ++L+D DWNP QA R R GQKK
Sbjct: 554 IEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKE 613
Query: 637 VYIYRFLSAGTIEEKVYQRQMSKEGLQKVI 666
V ++RF + IE KV +R K L ++
Sbjct: 614 VQVFRFCTENAIEAKVIERAYKKLALDALV 643
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 247/510 (48%), Gaps = 66/510 (12%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLL-YTLLSQGFDGKPM 221
LR +Q G+ ++ I+G ILAD+MGLGKTLQ+I+LL Y +G +G M
Sbjct: 194 LRDYQLAGLNWLIRLYEN-----GING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHM 247
Query: 222 VRKAIIVTPTSLVSNWEAEIKKW--VGERVRLVALCES---TREDVVSGIGNFTSPRSNL 276
V V P S + NW EI+++ V V+ + E RE+++ G F ++
Sbjct: 248 V-----VAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVA-GKFDICVTSF 301
Query: 277 QVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTP 336
++ I T R S ++ EAHR+KN+ ++ ++ + R+L++GTP
Sbjct: 302 EMAIKEKTTLRRFSWRYIIID--------EAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 337 LQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAK 396
LQN+L E +A++NF P + F +++ I G E +L
Sbjct: 354 LQNNLHELWALLNFLLPEVFSSAETFDEWFQ---ISGEND---------QQEVVQQLHKV 401
Query: 397 VNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELKQSKIL 456
+ F+LRR + + LPPK ++ ++ +Q YK LQ K+++ +N ++ ++L
Sbjct: 402 LRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ-KDLE-VVNGGGERKRLL 459
Query: 457 AYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVELS 516
L+K CNHP L + PG PP +T G+ V +
Sbjct: 460 NIAMQLRKCCNHPYL----FQGAEPG-----------PP---------YTTGD-HLVTNA 494
Query: 517 GKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKL 576
GK+ VL L + + R+++ S T+ LD+ + Y + R+DG T +R
Sbjct: 495 GKM-VLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDAS 553
Query: 577 VNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKR 636
+ +N ++FVFLLS++AGG G+NL + ++L+D DWNP QA R R GQKK
Sbjct: 554 IEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKE 613
Query: 637 VYIYRFLSAGTIEEKVYQRQMSKEGLQKVI 666
V ++RF + IE KV +R K L ++
Sbjct: 614 VQVFRFCTENAIEAKVIERAYKKLALDALV 643
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 250/536 (46%), Gaps = 63/536 (11%)
Query: 139 QHCEDGASTSNLTTISVVP-LLVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMG 197
++ E+ + + P L L +Q EG+ F+ S ILAD+MG
Sbjct: 200 KYVENERNREEFKQFDLTPEFLTGTLHTYQLEGLNFL------RYSWSKKTNVILADEMG 253
Query: 198 LGKTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCES 257
LGKT+QSI L +L + + ++V P S + NWE E W ++ +S
Sbjct: 254 LGKTIQSIAFLASLFEEN------LSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDS 307
Query: 258 TREDVVSGIGNFTSP--RSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQT 315
DV+ + S +S VL+ +YE S E HRLKN ++
Sbjct: 308 EARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGIS-VLSPIKWTCMIIDEGHRLKNQKS 366
Query: 316 ITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGRE 375
+L+ K VLL+GTPLQN+L E FA+++F + G + F+ +E
Sbjct: 367 KLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQD-------INKE 419
Query: 376 PTATTEEKKLSAERTTELSAKVNQFILRRTNA-LLSNHLPPKIVQVVCCKLTPLQSDLYK 434
E+ + L + +LRR +L + +PPK ++ ++ Q ++YK
Sbjct: 420 ------------EQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYK 467
Query: 435 HFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFP 494
+ + + + + +KI + L+++C+HP L+ D FED F
Sbjct: 468 AVITNN---YQVLTKKRDAKISNVLMKLRQVCSHPYLLPDF-------EPRFEDANEAFT 517
Query: 495 PEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLC 554
+E SGKLQ+L +++ L+E+ + R+++ + + TL L
Sbjct: 518 ----------------KLLEASGKLQLLDKMMVKLKEQGH-RVLIYTQFQHTLYLLEDYF 560
Query: 555 REQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDP 614
+ + + R+DG S +RQ ++ FN + + F FLLS++AGG G+NL + ++++D
Sbjct: 561 TFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDS 620
Query: 615 DWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQ 670
DWNP QA ARV R GQ +V IYR + GT+EE++ + +K L+ ++ +Q
Sbjct: 621 DWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQ 676
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 250/536 (46%), Gaps = 63/536 (11%)
Query: 139 QHCEDGASTSNLTTISVVP-LLVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMG 197
++ E+ + + P L L +Q EG+ F+ S ILAD+MG
Sbjct: 159 KYVENERNREEFKQFDLTPEFLTGTLHTYQLEGLNFL------RYSWSKKTNVILADEMG 212
Query: 198 LGKTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCES 257
LGKT+QSI L +L + + ++V P S + NWE E W ++ +S
Sbjct: 213 LGKTIQSIAFLASLFEEN------LSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDS 266
Query: 258 TREDVVSGIGNFTSP--RSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQT 315
DV+ + S +S VL+ +YE S E HRLKN ++
Sbjct: 267 EARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGIS-VLSPIKWTCMIIDEGHRLKNQKS 325
Query: 316 ITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGRE 375
+L+ K VLL+GTPLQN+L E FA+++F + G + F+ +E
Sbjct: 326 KLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQD-------INKE 378
Query: 376 PTATTEEKKLSAERTTELSAKVNQFILRRTNA-LLSNHLPPKIVQVVCCKLTPLQSDLYK 434
E+ + L + +LRR +L + +PPK ++ ++ Q ++YK
Sbjct: 379 ------------EQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYK 426
Query: 435 HFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFP 494
+ + + + + +KI + L+++C+HP L+ D FED F
Sbjct: 427 AVITNN---YQVLTKKRDAKISNVLMKLRQVCSHPYLLPDF-------EPRFEDANEAFT 476
Query: 495 PEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLC 554
+E SGKLQ+L +++ L+E+ + R+++ + + TL L
Sbjct: 477 K----------------LLEASGKLQLLDKMMVKLKEQGH-RVLIYTQFQHTLYLLEDYF 519
Query: 555 REQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDP 614
+ + + R+DG S +RQ ++ FN + + F FLLS++AGG G+NL + ++++D
Sbjct: 520 TFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDS 579
Query: 615 DWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQ 670
DWNP QA ARV R GQ +V IYR + GT+EE++ + +K L+ ++ +Q
Sbjct: 580 DWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQ 635
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 250/545 (45%), Gaps = 85/545 (15%)
Query: 162 FLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPM 221
L+P+Q GV F+ L I G ILAD+MGLGKT+Q+IT L L D P
Sbjct: 212 ILKPYQLVGVNFLL-----LLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGP- 265
Query: 222 VRKAIIVTPTSLVSNWEAEIKKWVGERVRL----VALCESTREDVVSGIGNFTSPRSNLQ 277
++V P S++ NWE E++KW L A +RE ++ + P
Sbjct: 266 ---HLVVCPASVLENWERELRKWCPSFTVLQYHGAARAAYSRE--LNSLSKAGKP-PPFN 319
Query: 278 VLIVSYETFRMHSS------KFXXXXXXXXXXXXEAHRLKNDQTITNRALAALP--CKRR 329
VL+V Y F HS K EAH LK+ + + L ++ +R
Sbjct: 320 VLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQR 379
Query: 330 VLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAER 389
++L+GTPLQNDL E ++++ F P I T + KKL
Sbjct: 380 LMLTGTPLQNDLHELWSLLEFMLPDIF-------------------TTENVDLKKLLNAE 420
Query: 390 TTELSAKVNQ----FILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFL-------Q 438
TEL ++ FILRR + + L PKI +V + Q D YK + Q
Sbjct: 421 DTELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQ 480
Query: 439 SKNVK------RAINEELKQSKILAYITALKKLCNHPKLIY------DTLRSGSP----G 482
++ VK ++ + L + +I Y T +K+ NHP LI D +R G
Sbjct: 481 ARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIG 540
Query: 483 TSGFEDCI-----------RFFPPEMLSGRSGSWTGG--NGAWVELSGKLQVLARLLAHL 529
GFE + F ++L + T G + V LS K + LA LL +
Sbjct: 541 AFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSM 600
Query: 530 RERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFV 589
+ ++ R+++ S +T LD+ + RLDG+T ++ RQ +V+ FN+ K F
Sbjct: 601 K-KSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNN-DKSIFA 658
Query: 590 FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIE 649
LLS++AGG GLNL G + +++ D D+NP +QA R R GQ K V I+R ++ T++
Sbjct: 659 CLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVD 718
Query: 650 EKVYQ 654
E +Y+
Sbjct: 719 ENIYE 723
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 153/553 (27%), Positives = 248/553 (44%), Gaps = 61/553 (11%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMV 222
L+ +Q +GV+++ N ILAD MGLGKT+Q+I L L G DG +V
Sbjct: 202 LKSYQLKGVKWLISLWQ------NGLNGILADQMGLGKTIQTIGFLSHLKGNGLDGPYLV 255
Query: 223 RKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLIVS 282
+ P S +SNW EI ++ ++ + + D + + ++I S
Sbjct: 256 -----IAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITS 310
Query: 283 YETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLE 342
YE + + E HRLKN + R L L ++LL+GTPLQN+L
Sbjct: 311 YEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLS 370
Query: 343 EFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQFIL 402
E ++++NF P I F +++ E T EEK+ A+ ++L + FIL
Sbjct: 371 ELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKR-RAQVVSKLHGILRPFIL 429
Query: 403 RRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHF----LQSKNVKRAINEELKQSKILAY 458
RR + LP K ++ +T Q +H L++ + AI + + K+
Sbjct: 430 RRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNL 489
Query: 459 ITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPP-EMLSGRSGSWTGGNGAWVELSG 517
+ L+K CNHP L+ G D +PP E + G+ G + V L
Sbjct: 490 VIQLRKNCNHPDLL-----------QGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFA 538
Query: 518 KLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLV 577
N ++++ S +T+ LD+ E+ + R+DG+ + +R++ +
Sbjct: 539 ---------------NNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQI 583
Query: 578 NCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRV 637
F+D +FLLS++AGG G+NL + +L+D DWNP QA R R GQ K V
Sbjct: 584 KDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPV 643
Query: 638 YIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNF----------LSTEDLR 687
++YR +A +IE +V +R SK L+ V+ + QG F L ED+
Sbjct: 644 HVYRLSTAQSIETRVLKRAYSKLKLEHVV--------IGQGQFHQERAKSSTPLEEEDIL 695
Query: 688 DLFTFDENLKSEI 700
L DE + ++
Sbjct: 696 ALLKEDETAEDKL 708
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 234/493 (47%), Gaps = 61/493 (12%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMV 222
LR +Q G+Q+M N ILAD+MGLGKT+Q + L+ L+ F G
Sbjct: 981 LRDYQLVGLQWMLSLYN------NKLNGILADEMGLGKTVQVMALIAYLME--FKGN--Y 1030
Query: 223 RKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLIVS 282
+I+ P +++ NW++E+ W+ + + + + F VL+ +
Sbjct: 1031 GPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVKF----EKFNVLVTT 1086
Query: 283 YETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLE 342
YE F M+ EA R+K+ +++ R L C+RR+LL+GTPLQNDL+
Sbjct: 1087 YE-FIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLK 1145
Query: 343 EFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQ--- 399
E ++++N P + + F ++ P P E+ L E+ + +++Q
Sbjct: 1146 ELWSLLNLLLPDVFDNRKAFHDWFAQP-FQKEGPAHNIEDDWLETEKKVIVIHRLHQILE 1204
Query: 400 -FILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVK--------RAINEEL 450
F+LRR + LP K+ V+ C+++ +QS +Y + ++ RA +
Sbjct: 1205 PFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPI 1264
Query: 451 KQSKILAYIT----ALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWT 506
Q+KI + L+K CNHP L Y F D + F
Sbjct: 1265 YQAKIYRTLNNRCMELRKACNHPLLNYPY----------FNDFSKDF------------- 1301
Query: 507 GGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDG 566
V GKL +L R+L L +RT R++L S T+ LD+ + + +R + R+DG
Sbjct: 1302 -----LVRSCGKLWILDRILIKL-QRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDG 1355
Query: 567 TTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAA 626
TTS+ R+ + FND D F+FLLS +A G GLNL + +V++DPD NP N +QA A
Sbjct: 1356 TTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVA 1415
Query: 627 RVWRDGQKKRVYI 639
R R GQ + V +
Sbjct: 1416 RAHRIGQTREVKV 1428
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 236/493 (47%), Gaps = 60/493 (12%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMV 222
LR +Q G+Q+M N ILAD+MGLGKT+Q + L+ L+ F G
Sbjct: 981 LRDYQLVGLQWMLSLYN------NKLNGILADEMGLGKTVQVMALIAYLME--FKGN--Y 1030
Query: 223 RKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLIVS 282
+I+ P +++ NW++E+ W+ + + +D S + + VL+ +
Sbjct: 1031 GPHLIIVPNAVLVNWKSELHTWLPS---VSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTT 1087
Query: 283 YETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLE 342
YE F M+ EA R+K+ +++ R L C+RR+LL+GTPLQNDL+
Sbjct: 1088 YE-FIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLK 1146
Query: 343 EFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQ--- 399
E ++++N P + + F ++ P P E+ L E+ + +++Q
Sbjct: 1147 ELWSLLNLLLPDVFDNRKAFHDWFAQP-FQKEGPAHNIEDDWLETEKKVIVIHRLHQILE 1205
Query: 400 -FILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVK--------RAINEEL 450
F+LRR + LP K+ V+ C+++ +QS +Y + ++ RA +
Sbjct: 1206 PFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPI 1265
Query: 451 KQSKILAYIT----ALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWT 506
Q+KI + L+K CNHP L Y F D + F
Sbjct: 1266 YQAKIYRTLNNRCMELRKACNHPLLNYPY----------FNDFSKDF------------- 1302
Query: 507 GGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDG 566
V GKL +L R+L L +RT R++L S T+ LD+ + + +R + R+DG
Sbjct: 1303 -----LVRSCGKLWILDRILIKL-QRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDG 1356
Query: 567 TTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAA 626
TTS+ R+ + FND D F+FLLS +A G GLNL + +V++DPD NP N +QA A
Sbjct: 1357 TTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVA 1416
Query: 627 RVWRDGQKKRVYI 639
R R GQ + V +
Sbjct: 1417 RAHRIGQTREVKV 1429
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 179 bits (454), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 196/715 (27%), Positives = 302/715 (42%), Gaps = 128/715 (17%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLL-YTLLSQGFDGKPM 221
L+PHQ EGV ++ ++ + D MGLGKTLQ+I+ L Y QG G P
Sbjct: 51 LKPHQVEGVSWLIQKY-----LLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPG-PF 104
Query: 222 VRKAIIVTPTSLVSNWEAEIKKWVG--ERVRLVA--LCESTREDVVSGIGNFTSPRSNLQ 277
+++ P S+ W +EI ++ E +R V C + G+F
Sbjct: 105 ----LVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLP----FD 156
Query: 278 VLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKN-DQTITNRALAALPCKRRVLLSGTP 336
VL+ +Y+ + F EA RLKN + + N L RR+L++GTP
Sbjct: 157 VLLTTYD-IALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTP 215
Query: 337 LQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAK 396
+QN+L E +A+++F P + G + F ++ T + +S ++ T S K
Sbjct: 216 IQNNLTELWALMHFCMPLVFGTLDQFLSAFKE----------TGDGLDVSNDKETYKSLK 265
Query: 397 --VNQFILRRTNALLSNH----LPPKIVQVVCCKLTPLQSDLYKHFLQSK--NVKRAINE 448
+ F+LRRT +LL LPP V L LQ +Y L+ + + +
Sbjct: 266 FILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSG 325
Query: 449 ELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGG 508
+ + + L+K C+HP L PG P G
Sbjct: 326 GSNHTSLQNIVIQLRKACSHPYLF--------PGIE---------PEPFEEGEH------ 362
Query: 509 NGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTT 568
V+ SGKL VL +LL L + + R++L S T TLD+ +RY + RLDG+
Sbjct: 363 ---LVQASGKLLVLDQLLKRLHD-SGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSV 418
Query: 569 SISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARV 628
+R + F+ + FVF++S++AGG GLNL+ + ++ ++ DWNP KQA R
Sbjct: 419 RAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 478
Query: 629 WRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRD 688
R GQ V ++ ++EE + +R K L + + + E G DLR
Sbjct: 479 HRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGG-----DLRS 533
Query: 689 LF----TFD---------ENLK----SEIHEKMRCSRCRIIDEP---------QSSDVL- 721
L FD +NLK S + EK+ R + EP SSD L
Sbjct: 534 LVFGLQRFDPEEIHNEESDNLKMVEISSLAEKVVAIRQNV--EPDKEERRFEINSSDTLL 591
Query: 722 ----STIVNSESDEET--SDIGGFAEIAGCLENLK----GSEKQIG------------TP 759
S ++SE DE + S + E A ++ K G+ K +
Sbjct: 592 GNTSSASLDSELDEASYLSWVEKLKEAARSSKDEKIIELGNRKNLSEERNLRIEAARKKA 651
Query: 760 LEEDLSSWGHH-FSPTSVPDPIL-----QASAGDEVTFVFTNQVNGKLVPMESII 808
E+ L++WG H + SV +PIL +S V FVF + N V E I
Sbjct: 652 EEKKLATWGAHGYQSLSVEEPILPDDVDSSSDAGSVNFVFGDCTNPSTVSHEPAI 706
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 234/502 (46%), Gaps = 65/502 (12%)
Query: 166 HQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMVRKA 225
HQ E + ++ C + N+ ILAD+MGLGKT+ + L +L + F + R
Sbjct: 692 HQLEALNWLRRC---WHKSKNV---ILADEMGLGKTVSASAFLSSLYFE-FG---VARPC 741
Query: 226 IIVTPTSLVSNWEAEIKKWV--------GERVRLVALCESTREDVVSGIGNFTSPRS-NL 276
+++ P S + NW +E W + A+ + G P S
Sbjct: 742 LVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKF 801
Query: 277 QVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTP 336
VL+ +YE SS E HRLKN ++ L + RVLL+GTP
Sbjct: 802 NVLLTTYEMVLADSSHLRGVPWEVLVVD-EGHRLKNSESKLFSLLNTFSFQHRVLLTGTP 860
Query: 337 LQNDLEEFFAMVNFTNPGILGDIAHFR-RYYEAPIICGREPTATTEEKKLSAERTTELSA 395
LQN++ E + ++NF P ++ F R+++ SAE+ EL
Sbjct: 861 LQNNIGEMYNLLNFLQPSSFPSLSSFEERFHDL----------------TSAEKVEELKK 904
Query: 396 KVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFL-QSKNVKRAINEELKQSK 454
V +LRR ++PPK ++V +LT +Q++ Y+ L ++ + R I + + Q
Sbjct: 905 LVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQS 964
Query: 455 ILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVE 514
+L + L+K+CNHP LI PGT PE SGS + ++
Sbjct: 965 MLNIVMQLRKVCNHPYLI--------PGTE----------PE-----SGSLEFLHDMRIK 1001
Query: 515 LSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHL--RLDGTTSISK 572
S KL +L +L L + R+++ S T+ LD+ + P R+DG+ +++
Sbjct: 1002 ASAKLTLLHSMLKVLH-KEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVAD 1060
Query: 573 RQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDG 632
RQ + FN K+ FVFLLS++A G G+NL + ++++D D+NP QA R R G
Sbjct: 1061 RQAAIARFNQ-DKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1119
Query: 633 QKKRVYIYRFLSAGTIEEKVYQ 654
Q KR+ +YR + ++EE++ Q
Sbjct: 1120 QSKRLLVYRLVVRASVEERILQ 1141
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 172 bits (436), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 197/731 (26%), Positives = 308/731 (42%), Gaps = 141/731 (19%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLL-YTLLSQGFDGKPM 221
L+PHQ EGV ++ ++ + D MGLGKTLQ+I+ L Y QG G P
Sbjct: 51 LKPHQVEGVSWLIQKY-----LLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPG-PF 104
Query: 222 VRKAIIVTPTSLVSNWEAEIKK---------WVGERVRLVALCESTREDVV-SGIGNFTS 271
+++ P S+ W +EI + +VG++ + + +S + V S G+F
Sbjct: 105 ----LVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLP 160
Query: 272 PRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKN-DQTITNRALAALPCKRRV 330
VL+ +Y+ + F EA RLKN + + N L RR+
Sbjct: 161 ----FDVLLTTYD-IALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRL 215
Query: 331 LLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERT 390
L++GTP+QN+L E +A+++F P + G + F + +E +S ++
Sbjct: 216 LITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAF-------KETGDGLSGLDVSNDKE 268
Query: 391 TELSAK--VNQFILRRTNALLSNH----LPPKIVQVVCCKLTPLQSDLYKHFLQSK--NV 442
T S K + F+LRRT +LL LPP V L LQ +Y L+ + +
Sbjct: 269 TYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGL 328
Query: 443 KRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRS 502
+ + + + L+K C+HP L PG P G
Sbjct: 329 LELSSGGSNHTSLQNIVIQLRKACSHPYLF--------PGIE---------PEPFEEGEH 371
Query: 503 GSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHL 562
V+ SGKL VL +LL L + + R++L S T TLD+ +RY +
Sbjct: 372 ---------LVQASGKLLVLDQLLKRLHD-SGHRVLLFSQMTSTLDILQDFMELRRYSYE 421
Query: 563 RLDGTTSISKRQKLVNCFNDTSK----------DEFVFLLSSKAGGCGLNLIGGNRLVLF 612
RLDG+ +R + F+ ++ + FVF++S++AGG GLNL+ + ++ +
Sbjct: 422 RLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFY 481
Query: 613 DPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTD 672
+ DWNP KQA R R GQ V ++ ++EE + +R K L + + +
Sbjct: 482 EQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNME 541
Query: 673 SLLEQGNFLSTEDLRDLF----TFD---------ENLK----SEIHEKMRCSRCRIIDEP 715
E G DLR L FD +NLK S + EK+ R + EP
Sbjct: 542 EKEEDGG-----DLRSLVFGLQRFDPEEIHNEESDNLKMVEISSLAEKVVAIRQNV--EP 594
Query: 716 ---------QSSDVL-----STIVNSESDEET--SDIGGFAEIAGCLENLK----GSEKQ 755
SSD L S ++SE DE + S + E A ++ K G+ K
Sbjct: 595 DKEERRFEINSSDTLLGNTSSASLDSELDEASYLSWVEKLKEAARSSKDEKIIELGNRKN 654
Query: 756 IG------------TPLEEDLSSWGHH-FSPTSVPDPIL-----QASAGDEVTFVFTNQV 797
+ E+ L++WG H + SV +PIL +S V FVF +
Sbjct: 655 LSEERNLRIEAARKKAEEKKLATWGAHGYQSLSVEEPILPDDVDSSSDAGSVNFVFGDCT 714
Query: 798 NGKLVPMESII 808
N V E I
Sbjct: 715 NPSTVSHEPAI 725
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 240/546 (43%), Gaps = 82/546 (15%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMV 222
+RPHQ EG +F+ + +A P GCILA G GKT I+ L + ++ +P+V
Sbjct: 265 MRPHQTEGFRFLCNNLAA--DEPG--GCILAHAPGSGKTFLLISFLQSFMAMDPQARPLV 320
Query: 223 RKAIIVTPTSLVSNWEAEIKKWVGERVRLV---ALCESTREDVVSGIGNFTSPRSNLQVL 279
V P ++ +W+ E W E++ L+ ++ +R+ + +G + RS +L
Sbjct: 321 -----VLPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERS---IL 372
Query: 280 IVSYETFRM-----------HSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKR 328
+ Y+ F K E H +N +T +LA + +R
Sbjct: 373 FLGYQQFTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRR 432
Query: 329 RVLLSGTPLQNDLEEFFAMVNFTNPGILG-----DIAHFRRYYEAPIICGREPTATTEE- 382
+V+L+GT QN++EE F +++ P L +I R +A I G++ ++
Sbjct: 433 KVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVS-RIMSKAEIPRGKQVNQSSSSI 491
Query: 383 -------KKLSAERTTELSAK---------VNQFILRRTNALLSNHLPPKIVQVVCCKLT 426
+L+ +R+T SAK + + IL A S LP V L+
Sbjct: 492 EGTFFAAVELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLS 551
Query: 427 PLQSDLYKHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGF 486
+Q D K L++ ++ I+ L HPKL + S G GF
Sbjct: 552 SIQRDEVKG--------------LRKMELFKQISLGAALYIHPKLKSFLEENPSNGEKGF 597
Query: 487 ED--CIRFFPPEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYT 544
D +ML + V K++ LLA L E T +++++ S Y
Sbjct: 598 SDNNTTVMKLDKMLKKIN----------VRDGVKMKFFLNLLA-LCESTGEKLLVFSQYI 646
Query: 545 QTLDLFAQLCREQRYPHL-----RLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGC 599
+ +L + L + G +S +R+ + FN+ S + VF S KA G
Sbjct: 647 VPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNN-SLEAKVFFGSIKACGE 705
Query: 600 GLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSK 659
G++L+G +R+++ D NP+ +QA AR +R GQK++VY Y+ ++A + EE+ Y+ K
Sbjct: 706 GISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRK 765
Query: 660 EGLQKV 665
E + K+
Sbjct: 766 EMMSKM 771
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 162/345 (46%), Gaps = 26/345 (7%)
Query: 144 GASTSNLTTISVVPLLVRF-LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTL 202
G + S + +P L++ LR +Q G+ ++ ++G ILAD+MGLGKT+
Sbjct: 516 GFTYSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEK-----KLNG-ILADEMGLGKTI 569
Query: 203 QSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDV 262
+I LL L K + +IV PTS++ NWE E KW +++ S +E
Sbjct: 570 MTIALLAHLACD----KGIWGPHLIVVPTSVMLNWETEFLKWCPA-FKILTYFGSAKERK 624
Query: 263 VSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALA 322
+ G ++ V I +Y + SK EAH +KN ++ + L
Sbjct: 625 LKRQGWMK--LNSFHVCITTYRLV-IQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLL 681
Query: 323 ALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEE 382
KRR+LL+GTPLQNDL E +++++F P + F+ ++ PI E +
Sbjct: 682 NFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEG-----Q 736
Query: 383 KKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNV 442
+K++ E L + F+LRR + LP K V+ C+L+ Q +LY+ F+ S
Sbjct: 737 EKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTET 796
Query: 443 KRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFE 487
+ + +++ I L+K+CNHP L G P S F+
Sbjct: 797 QATLTSG-SFFGMISIIMQLRKVCNHPDLF-----EGRPIVSSFD 835
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 517 GKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKL 576
GKLQ LA LL L+ R ++ + T+ LD+ Y ++RLDG+T +RQ L
Sbjct: 1075 GKLQELAMLLRKLK-FGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTL 1133
Query: 577 VNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKR 636
+ FN T+ F+F+LS+++GG G+NL+G + ++ +D DWNPA +QA R R GQ +
Sbjct: 1134 MQRFN-TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1192
Query: 637 VYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDL 689
V+IYR +S TIEE + L+K Q+ D+L+ Q +TE + L
Sbjct: 1193 VHIYRLISESTIEENI---------LKKANQKRVLDNLVIQNGEYNTEFFKKL 1236
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%)
Query: 516 SGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQK 575
SGKLQ L LL LR N R++L + T+ L++ ++Y +LRLDG+++I R+
Sbjct: 1238 SGKLQTLDILLKRLRA-GNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRD 1296
Query: 576 LVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKK 635
+V F S D FVFLLS++AGG G+NL + ++ ++ DWNP QA R R GQ K
Sbjct: 1297 MVRDFQHRS-DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1355
Query: 636 RVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFTFDEN 695
V +YR + T+EEK+ R K +Q+++ T ++ +FL D+ L D+
Sbjct: 1356 DVTVYRLICKETVEEKILHRASQKNTVQQLV---MTGGHVQGDDFLGAADVVSLL-MDDA 1411
Query: 696 LKSEIHEKMRCSRCRIIDEPQSSDVLSTIVNSESD---EETSDI 736
+++ +K R ++ D Q +++E D EE D+
Sbjct: 1412 EAAQLEQKFRELPLQVKDR-QKKKTKRIRIDAEGDATLEELEDV 1454
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 152/365 (41%), Gaps = 60/365 (16%)
Query: 151 TTISVVPLLVRFLRPHQREGVQFMFDCVA-GLCSTPNIHGCILADDMGLGKTLQSITLLY 209
+T+ L L+ +Q +G+Q++ +C GL ILAD+MGLGKT+Q++ L
Sbjct: 574 STVQTPELFKGTLKEYQMKGLQWLVNCYEQGL-------NGILADEMGLGKTIQAMAFLA 626
Query: 210 TLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKK----------WVGERVRLV------- 252
L + P ++V P S+++NW EI + W G + R +
Sbjct: 627 HLAEEKNIWGPF----LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINP 682
Query: 253 -------------------ALCESTREDVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKF 293
+C R V + + +LI SY+ + K+
Sbjct: 683 KRVMFFSTWIISFDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLL-VTDEKY 741
Query: 294 XXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNP 353
EA +K+ +I + L + C+ R+LL+GTP+QN++ E +A+++F P
Sbjct: 742 FRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMP 801
Query: 354 GILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHL 413
+ + F ++ I E T E +L+ L A + F+LRR + + L
Sbjct: 802 MLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLN-----RLHAILKPFMLRRVKKDVVSEL 856
Query: 414 PPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELKQS------KILAYITALKKLCN 467
K V CKL+ Q Y+ ++ + Q ++ + L+K+CN
Sbjct: 857 TTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCN 916
Query: 468 HPKLI 472
HP+L
Sbjct: 917 HPELF 921
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%)
Query: 516 SGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQK 575
SGKLQ L LL LR N R++L + T+ L++ ++Y +LRLDG+++I R+
Sbjct: 1205 SGKLQTLDILLKRLRA-GNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRD 1263
Query: 576 LVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKK 635
+V F S D FVFLLS++AGG G+NL + ++ ++ DWNP QA R R GQ K
Sbjct: 1264 MVRDFQHRS-DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK 1322
Query: 636 RVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFTFDEN 695
V +YR + T+EEK+ R K +Q+++ T ++ +FL D+ L D+
Sbjct: 1323 DVTVYRLICKETVEEKILHRASQKNTVQQLV---MTGGHVQGDDFLGAADVVSLL-MDDA 1378
Query: 696 LKSEIHEKMRCSRCRIIDEPQSSDVLSTIVNSESD---EETSDI 736
+++ +K R ++ D Q +++E D EE D+
Sbjct: 1379 EAAQLEQKFRELPLQVKDR-QKKKTKRIRIDAEGDATLEELEDV 1421
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 33/335 (9%)
Query: 151 TTISVVPLLVRFLRPHQREGVQFMFDCVA-GLCSTPNIHGCILADDMGLGKTLQSITLLY 209
+T+ L L+ +Q +G+Q++ +C GL ILAD+MGLGKT+Q++ L
Sbjct: 574 STVQTPELFKGTLKEYQMKGLQWLVNCYEQGL-------NGILADEMGLGKTIQAMAFLA 626
Query: 210 TLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNF 269
L + P ++V P S+++NW EI ++ + ++ + +E + +
Sbjct: 627 HLAEEKNIWGPF----LVVAPASVLNNWADEISRFCPD-LKTLPYWGGLQERTI--LRKN 679
Query: 270 TSPR------SNLQVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAA 323
+P+ + +LI SY+ + K+ EA +K+ +I + L +
Sbjct: 680 INPKRMYRRDAGFHILITSYQLL-VTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLS 738
Query: 324 LPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEK 383
C+ R+LL+GTP+QN++ E +A+++F P + + F ++ I E T E
Sbjct: 739 FNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEH 798
Query: 384 KLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVK 443
+L+ L A + F+LRR + + L K V CKL+ Q Y+ ++
Sbjct: 799 QLN-----RLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLA 853
Query: 444 RAINEELKQS------KILAYITALKKLCNHPKLI 472
+ Q ++ + L+K+CNHP+L
Sbjct: 854 ELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELF 888
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 143/609 (23%), Positives = 244/609 (40%), Gaps = 85/609 (13%)
Query: 151 TTISVVPLLVRFLRPHQREGVQFMFDCVAGLCSTPNIH--------GCILADDMGLGKTL 202
T VP + L PHQ+EG +F++ +AG ++ GCI++ G GKT
Sbjct: 565 TVWQYVPGIKDTLYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSGGCIISHKAGTGKTR 624
Query: 203 QSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKW---------------VGE 247
++ L + L + + PMV + P +L+ WE E++KW E
Sbjct: 625 LTVVFLQSYLKRFPNSHPMV-----IAPATLMRTWEDEVRKWNVNIPFYNMNSLQLSGYE 679
Query: 248 RVRLVALCESTREDVVSGIGNFTSPRSNLQVLIVSYETFR----------MHSSKFXXXX 297
V+ E R + S +L +SY + M +
Sbjct: 680 DAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGMQVFRRMLVE 739
Query: 298 XXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILG 357
E H +N ++ + L + ++R+ LSGT QN+ +E ++ P
Sbjct: 740 LPGLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKD 799
Query: 358 DIAHFRRYYEAPIICGREPTATTEEKKLSAE-RTTELSAKVNQFILRRTNALLSNHLPPK 416
I+ R +E C +E E +++ E R +L A + F+ +L LP
Sbjct: 800 TIS--SRIHELSK-CSQE----GEHGRVNEENRIVDLKAMIAHFVHVHEGTILQESLPGL 852
Query: 417 IVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTL 476
VV Q + S+N E K S + + + LC +P D +
Sbjct: 853 RDCVVVLNPPFQQKKILDRIDTSQN---TFEFEHKLSAVSVHPSLY--LCCNPTKKEDLV 907
Query: 477 RSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDR 536
P T G +R L G T ++ +SG ++ ++
Sbjct: 908 IG--PATLGTLKRLR------LKYEEGVKTKFLIDFIRISGTVK--------------EK 945
Query: 537 IVLVSNYTQTLDL-FAQLCREQRYPH----LRLDGTTSISKRQKLVNCFNDTSKDEFVFL 591
+++ S Y TL L QL E + L + G RQ +++ FN V L
Sbjct: 946 VLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLL 1005
Query: 592 LSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEK 651
S+KA G++L+G +R+V+ D WNP+ QA +R +R GQK+ V+IY + T E
Sbjct: 1006 ASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEWN 1065
Query: 652 VYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFTFDENLKSEIHEKMRCSRCRI 711
Y +Q K + +++ S E+ ++ E + DE ++ HEK++ +I
Sbjct: 1066 KYCKQSEKHRISELV----FSSTNEKDKPINNEVVSKDRILDEMVR---HEKLKHIFEKI 1118
Query: 712 IDEPQSSDV 720
+ P+ SD+
Sbjct: 1119 LYHPKKSDM 1127
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 143/608 (23%), Positives = 248/608 (40%), Gaps = 99/608 (16%)
Query: 154 SVVPLLVRFLRPHQREGVQFMFDCVAGLC-------STPNIHGCILADDMGLGKTLQSIT 206
+++P L R L HQR +F++ VAG ++ NI GC+++ G GKT I
Sbjct: 670 ALIPKLKRKLHVHQRRAFEFLWRNVAGSVEPSLMDPTSGNIGGCVISHSPGAGKTFLIIA 729
Query: 207 LLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWV---------GER--------- 248
L + L + F GK + +++ P + + W E KW G R
Sbjct: 730 FLTSYL-KLFPGK----RPLVLAPKTTLYTWYKEFIKWEIPVPVHLIHGRRTYCTFKQNK 784
Query: 249 -VRLVALCESTRE-----DVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXX 302
V+ + + +R+ D + I + + S L + S+ T SKF
Sbjct: 785 TVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMREDSKFAHRKYMAKV 844
Query: 303 XXX--------EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPG 354
E H ++ ++ +AL + R+LLSGT QN+ E+F + P
Sbjct: 845 LRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQNNFCEYFNTLCLARPK 904
Query: 355 ILGDI-----AHFRRYY---EAPIIC---GREPTATTEEKKLSAERTTELSAKVNQFILR 403
+ ++ F+ + +AP + R+ KK+ A E +N +
Sbjct: 905 FIHEVLMELDQKFKTNHGVNKAPHLLENRARKLFLDIIAKKIDASVGDERLQGLN-MLKN 963
Query: 404 RTNALLSNH----------LPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELKQS 453
TN + N+ LP + + T +Q + E++
Sbjct: 964 MTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQHKILTKLQDVIKTYFGYPLEVELQ 1023
Query: 454 KILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGNGAWV 513
LA I HP L+ + C +FF P+ LS G
Sbjct: 1024 ITLAAI--------HPWLVTSS-----------NCCTKFFNPQELSE-----IGKLKHDA 1059
Query: 514 ELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTL----DLFAQLCREQRYPH-LRLDGTT 568
+ K+ + L+ + +R ++I++ + + +LF + R QR L L G
Sbjct: 1060 KKGSKVMFVLNLIFRVVKR--EKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDL 1117
Query: 569 SISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARV 628
+ +R ++++ F + V L S A G++L +R+++ D +WNP+ KQA AR
Sbjct: 1118 ELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARA 1177
Query: 629 WRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQ--TDSLLEQGNFLSTEDL 686
+R GQ+K VY+Y+ LS GT+EE Y+R KE + +I E+ D L Q + + L
Sbjct: 1178 FRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIFSEEFVADPSLWQAEKIEDDIL 1237
Query: 687 RDLFTFDE 694
R++ D+
Sbjct: 1238 REIVGEDK 1245
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 134/584 (22%), Positives = 236/584 (40%), Gaps = 102/584 (17%)
Query: 154 SVVPLLVRFLRPHQREGVQFMFDCVAGLC-------STPNIHGCILADDMGLGKTLQSIT 206
S++P L R L HQ++ +F++ +AG S+ I GC+++ G GKT I
Sbjct: 665 SLIPQLKRKLHLHQKKAFEFLWKNLAGSVVPAMMDPSSDKIGGCVVSHTPGAGKTFLIIA 724
Query: 207 LLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKW-VGERVRLV----ALCESTRE- 260
L + L + F GK + +++ P + + W E KW + V L+ C S +
Sbjct: 725 FLASYL-KIFPGK----RPLVLAPKTTLYTWYKEFIKWEIPVPVHLLHGRRTYCMSKEKT 779
Query: 261 -----------------DVVSGIGNFTSPRSNLQVLIVSYETFRMHSSKFXXXXXXXXX- 302
D + I + + S L + S+ T SKF
Sbjct: 780 IQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDSKFAHRKYMAKVL 839
Query: 303 -------XXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGI 355
E H ++ ++ +AL + R+LLSGT QN+ E+F + P
Sbjct: 840 RESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFNTLCLARPKF 899
Query: 356 LGDI-AHFRRYYEAPIICGREP--------------TATTEEKKLSAERTTELSAKVNQF 400
+ ++ + ++ + P A + K+ ER L+ N
Sbjct: 900 VHEVLVELDKKFQTNQAEQKAPHLLENRARKFFLDIIAKKIDTKVGDERLQGLNMLRNM- 958
Query: 401 ILRRTNALLSNH----------LPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEEL 450
T+ + N+ LP + + T +Q +K + +N+ +
Sbjct: 959 ----TSGFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDVQ---HKSLTKLQNIMSTYHGYP 1011
Query: 451 KQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFF-PPEMLSGRSGSWTGGN 509
+ ++L + A+ HP L+ T C +FF P E+L
Sbjct: 1012 LELELLITLAAI-----HPWLVKTT-----------TCCAKFFNPQELLEIEKLKHDAKK 1055
Query: 510 GAWVELSGKLQVLARLLAHLRERTNDRIVL--VSNYTQTLDLFAQLCREQRYPHL-RLDG 566
G+ K+ + L+ + +R I ++ L+LF + R +R L L G
Sbjct: 1056 GS------KVMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTG 1109
Query: 567 TTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAA 626
+ +R ++++ F + V L S A G++L +R+++ D +WNP+ KQA A
Sbjct: 1110 DLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIA 1169
Query: 627 RVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQ 670
R +R GQ+K VY+Y+ LS GT+EE Y+R KE + +I E+
Sbjct: 1170 RAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSEE 1213
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 512 WVELSGKLQVLARLLAHLRER-TNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSI 570
W E S K+ L + L +++ + ++ ++ S +T LDL R + + LR DG +
Sbjct: 1105 WKE-SSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQ 1163
Query: 571 SKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWR 630
R+K++ FN+T K + + L+S KAGG GLNL + + L DP WNPA +QA R+ R
Sbjct: 1164 KGREKVLKEFNET-KQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHR 1222
Query: 631 DGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLF 690
GQK+ V++ RF+ T+EE++ Q Q K Q++I TD + E+L+ LF
Sbjct: 1223 IGQKRTVFVRRFIVKDTVEERMQQVQARK---QRMIAGALTDEEVRSARL---EELKMLF 1276
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 142/359 (39%), Gaps = 75/359 (20%)
Query: 183 STPNIHGCILADDMGLGKTLQSITLLYT-----------LLSQGFDGKPMVRKAI----- 226
+T G ILAD MGLGKT+ +I L+ +L + RK I
Sbjct: 676 ATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALT 735
Query: 227 ---------IVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQ 277
I+ P +L+S W+ E++ ++ D VS + + R++
Sbjct: 736 TVKAKGGTLIICPMALLSQWKDELET-------------HSKPDTVSVLVYYGGDRTHDA 782
Query: 278 VLIVSYE----TFRMHSSKFXXXXXXXX--------XXXXEAHRLKNDQTITNRALAALP 325
I S++ T+ + +S + EAH +K+ +T +A L
Sbjct: 783 KAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELS 842
Query: 326 CKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKK- 384
R L+GTPLQN LE+ ++++ F + + A + + + P G +P K
Sbjct: 843 SHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENG-DPRGLKLIKAI 901
Query: 385 ---LSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKN 441
L RT E K IL LPP VQV+ C+ + + D Y +
Sbjct: 902 LRPLMLRRTKETRDKEGSLIL---------ELPPTDVQVIECEQSEAERDFYTALFKRSK 952
Query: 442 VKRAINEELKQSK-------ILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFF 493
V+ ++ + Q K IL + L++ CNHP L+ R+ S + + R F
Sbjct: 953 VQ--FDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMS--RADSQQYADLDSLARRF 1007
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 512 WVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSIS 571
WVE S K+ L L LR + + +L S +T LDL + +RLDGT S
Sbjct: 859 WVE-SSKITALLEELEGLRS-SGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQ 916
Query: 572 KRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRD 631
+R+K++ F++ V L+S KAGG G+NL + + DP WNPA +QA R+ R
Sbjct: 917 QREKVLKEFSEDGSI-LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRI 975
Query: 632 GQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFT 691
GQ K V I RF+ GT+EE++ Q K Q++I TD + E+L+ LFT
Sbjct: 976 GQTKEVKIRRFIVKGTVEERMEAVQARK---QRMISGALTDQEVRSARI---EELKMLFT 1029
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 144/354 (40%), Gaps = 98/354 (27%)
Query: 189 GCILADDMGLGKTLQSITLLYT-------------------LLSQ--------------- 214
G ILAD MGLGKT+ +I+LL ++S
Sbjct: 414 GGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
Query: 215 -GFDGKPMVRKAI-------IVTPTSLVSNWEAEIKKWV--GERVRLVALCESTRED--- 261
GFD + + +K++ IV P +L+ W+ EI+ G V +S +D
Sbjct: 474 LGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKL 533
Query: 262 ------VVSGIGNFTSPRSNLQVL----IVSYETFRMHSSKFXXXXXXXXXXXXEAHRLK 311
V++ G TS S I + FR+ EAH +K
Sbjct: 534 LSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRI--------------VLDEAHTIK 579
Query: 312 NDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPII 371
N ++ + A AAL RR L+GTP+QN+LE+ ++++ F G A + + + P
Sbjct: 580 NSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFE 639
Query: 372 CGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNH------LPPKIVQVVCCKL 425
G +E+ L ++ + +LRRT + LPP +V+ C+L
Sbjct: 640 EG-------DERGLKLVQSI-----LKPIMLRRTKSSTDREGRPILVLPPADARVIYCEL 687
Query: 426 TPLQSDLYKHFLQSKNVKRAINEELKQSK-------ILAYITALKKLCNHPKLI 472
+ + D Y + VK ++ ++Q K IL + L++ C+HP L+
Sbjct: 688 SESERDFYDALFKRSKVK--FDQFVEQGKVLHNYASILELLLRLRQCCDHPFLV 739
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 156/369 (42%), Gaps = 36/369 (9%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRY 365
EAH +N ++ + L+ + ++R+LLSGTP QN+ E ++ P L + +
Sbjct: 1012 EAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTSTLKK 1071
Query: 366 YEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKL 425
+ + E ++ EL A + F+ ++L + LP VV L
Sbjct: 1072 SGMTVTKRGKKNLGNE---INNRGIEELKAVMLPFVHVHKGSILQSSLPGLRECVVV--L 1126
Query: 426 TPLQSDLYKHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSG 485
P +L + L+S V K + L + HP L+
Sbjct: 1127 NP--PELQRRVLESIEV----THNRKTKNVFETEHKLSLVSVHPSLV---------SRCK 1171
Query: 486 FEDCIRFFPPEMLSGRSGSWTGGNGAWVELSGKLQVLARLL---AHLRERTNDRIVLVSN 542
+ R E L + V L V R L L E +++++ S
Sbjct: 1172 ISEKERLSIDEALLAQLKK--------VRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQ 1223
Query: 543 YTQTLDLFAQ--LCREQRYPH---LRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAG 597
Y L L + + R + P L + G +RQ L+N FND VFL S+KA
Sbjct: 1224 YIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKAC 1283
Query: 598 GCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQM 657
G++L+G +R++L D WNPA +QA +R +R GQK+ VY Y ++ GT E Y +Q
Sbjct: 1284 SEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQA 1343
Query: 658 SKEGLQKVI 666
K+ + +++
Sbjct: 1344 QKDRISELV 1352
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 143 DGASTSNLTTISVVPLLVRFLRPHQREGVQFMFDCVAGLC---------STPNIHGCILA 193
+G +S T +P + + PHQ+EG +F++ +AG ++ GCI++
Sbjct: 803 EGCVSSEGTVWDKIPGVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMS 862
Query: 194 DDMGLGKTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKW 244
G GKT +I L L D KP +I+ P SL+ W E KKW
Sbjct: 863 HAPGTGKTRLTIIFLQAYLQCFPDCKP-----VIIAPASLLLTWAEEFKKW 908
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 219/531 (41%), Gaps = 92/531 (17%)
Query: 159 LVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 218
LV L P Q +G++F GL C +AD+MGLGKTLQ+I + +S+G
Sbjct: 200 LVNALLPFQLDGLRF------GLRRGGR---CFIADEMGLGKTLQAIAIAGCFISEG--- 247
Query: 219 KPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTS--PRSNL 276
++V P L W E+++W+ C + +V G + + PR
Sbjct: 248 -----SILVVCPAVLRFTWAEELERWLPS-------CLPSDVHLVFGHQDNPAYLPRWP- 294
Query: 277 QVLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRL-----KNDQTITNRAL-AALPCKRRV 330
+V+++SY+ + H E+H L K+D L A K +
Sbjct: 295 KVVVISYKMLQ-HLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHII 353
Query: 331 LLSGTPLQNDLEEFFAMVNFTNPGILG-DIAHFRRYY-EAPIICGREPTATTEEKKLSAE 388
LLSGTP + + F +N PG+LG D F + Y E ++ G + + K
Sbjct: 354 LLSGTPSVSRPFDIFHQINMLWPGLLGKDKYEFAKTYCEVGLVRGIQGKIFQDFSK--GT 411
Query: 389 RTTELSAKVNQFIL-RRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFLQSKNVKR--- 444
R EL+ +NQ ++ RR L LPPK Q+V L +SD+ K+
Sbjct: 412 RLLELNILLNQTVMIRRLKQHLLTQLPPKRRQIVTILLK--KSDIALAMAIVSEAKKQKD 469
Query: 445 -AINE----------ELKQSKILAYITA----------LKKLCNHPKLIYDTLRSGSPGT 483
AI E + S ++ A +LC KL Y L G
Sbjct: 470 GAIAEVTEKSHEPDQNARGSNEAGHVNAENSDGPNSDKENQLCG--KLSYQQL--GIAKL 525
Query: 484 SGFEDCIRFFPPEMLSGRSGSWTGGNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNY 543
S F + + P +LSG + +G +R++ ++V+ +++
Sbjct: 526 SAFREWLSLHP--LLSGLDYTPEEIDG--------------------DRSSTKMVVFAHH 563
Query: 544 TQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNL 603
+ LD + ++ +R+DGTT RQ V F +S+ + + ++ +AGG GL+
Sbjct: 564 HKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVK-IAIIGVEAGGVGLDF 622
Query: 604 IGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQ 654
+V + P+ QA R R GQ V +Y F + T++E +Q
Sbjct: 623 SAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQ 673
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 200/513 (38%), Gaps = 92/513 (17%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHG--CILADDMGLGKTLQSITLLYTLLSQGFDGKP 220
L P QREG++F+ HG +LAD+MGLGKTLQ+I + T + + +
Sbjct: 172 LLPFQREGIEFILQ-----------HGGRVLLADEMGLGKTLQAIAV-TTCVQESW---- 215
Query: 221 MVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQ--- 277
+I+ P+SL +W I +W+ V + + S FT SN +
Sbjct: 216 ---PVLIIAPSSLRLHWATMIHQWL--HVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTI 270
Query: 278 -----VLIVSYETFRMHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRR--- 329
IVSY+ K E+H LKN Q R A LP ++
Sbjct: 271 HLDGVFNIVSYDVV-TKLDKLLMALDFKVVIADESHFLKNGQA--KRTSACLPVIKKAQY 327
Query: 330 -VLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAE 388
+LLSGTP + E F + P + +I + Y G A+ ++ +
Sbjct: 328 AILLSGTPALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQGASNHDELHNLM 387
Query: 389 RTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPL-QSDLYKHFLQSKNVKRAIN 447
+ T ++RR + LP K Q V L + F + K VK I
Sbjct: 388 KAT--------VMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFHELKVVKSKIK 439
Query: 448 EELKQSKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTG 507
+ + + I + K L N K+ D+ + P + + +
Sbjct: 440 DCISEDDIKSLKFIEKNLIN--KIYTDSAVAKIPAVLDYLENV----------------- 480
Query: 508 GNGAWVELSGKLQVLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGT 567
+E K V A ++ L+ Q ++++ +R+DG+
Sbjct: 481 -----IEAGCKFLVFA------------------HHQSMLEELHQFLKKKKVGCIRIDGS 517
Query: 568 TSISKRQKLVNCFNDTSKDEF-VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAA 626
T S RQ LV+ F D KDE +LS +A G G+ L + ++ + W P + QA
Sbjct: 518 TPASSRQALVSDFQD--KDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAED 575
Query: 627 RVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSK 659
R R GQ V I+ L+ T+++ ++ SK
Sbjct: 576 RAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSK 608
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 188/486 (38%), Gaps = 114/486 (23%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNF-------------TN 352
EAH +K ++ T RA+ AL R LSGTPLQN + E ++++ F +
Sbjct: 361 EAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQIRPYSYYFCKDCD 420
Query: 353 PGILGDIAH----------------FRRYYEAPIICGREPTATTEEKKLSAERTTELSAK 396
IL +AH + +Y PI L L K
Sbjct: 421 CRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPI-------TVYGSFGLGKRAMILLKHK 473
Query: 397 V-NQFILRRTNALLSNHL--PPKIVQVVCCKLTPLQSDLYKHFLQSKNVKRAINEELKQ- 452
V +LRRT + L PP+I+ + L + D Y+ KN + N ++
Sbjct: 474 VLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLY--KNSQAEFNTYIEAG 531
Query: 453 ------SKILAYITALKKLCNHPKLIYDTLRSGSPGTSGFED------------------ 488
+ I +T L++ +HP L+ + SG+ E+
Sbjct: 532 TLMNNYAHIFDLLTRLRQAVDHPYLVVYSNSSGANANLVDENKSEQECGLCHDPAEDYVV 591
Query: 489 --CIRFFPPEMLSGRSGS----------------WT---------------GGNGAWV-- 513
C F L G S S WT G + +
Sbjct: 592 TSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKADTEHKASKTTLKGFRASSILN 651
Query: 514 -------ELSGKLQVLARLLAHLRERTND-RIVLVSNYTQTLDLFAQLCREQRYPHLRLD 565
+ S K++ L + + ER + ++ S +T LDL + ++L
Sbjct: 652 RIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLV 711
Query: 566 GTTSISKRQKLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAA 625
G+ +++ R +N F + D VFL+S KAGG LNL + + + DP WNPA +QA
Sbjct: 712 GSMTMAARDTAINKFKE-DPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQ 770
Query: 626 ARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTED 685
R+ R GQ K + + RF+ T+EE++ + Q KE ++ E L+ ED
Sbjct: 771 DRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKE----LVFEGTVGGSQEAIGKLTEED 826
Query: 686 LRDLFT 691
+R LFT
Sbjct: 827 MRFLFT 832
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 202/532 (37%), Gaps = 103/532 (19%)
Query: 189 GCILADDMGLGKTLQSITLLYTLLSQGFDGKPMVRK--------AIIVTPTSLVSNWEAE 240
G ILADD GLGKT+ +I+L+ L Q + RK +IV P S+V W E
Sbjct: 76 GGILADDQGLGKTISTISLI---LLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWARE 132
Query: 241 IKKWVGERVRLVALC-----------ESTREDVVSGIGNFTSPRSNLQVLIVSYETFRMH 289
+K+ V + +L L E DVV + ++ Y++ R
Sbjct: 133 VKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDSMRGR 192
Query: 290 SS-----------KFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQ 338
S EAH +KN +T+ +A +L KRR L+GTP++
Sbjct: 193 ESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIK 252
Query: 339 NDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVN 398
N +++ ++ F F + +API ++K L + +L A +
Sbjct: 253 NKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPI----------DKKPLHGYK--KLQAILR 300
Query: 399 QFILRRTNALLSNHLPPKIVQVVCCKLTPLQSD--LYKHFLQSKNVKRAINEELKQSKIL 456
+LRRT K+ K +D L++H + +L
Sbjct: 301 GIMLRRTKEW---SFYRKLELNSRWKFEEYAADGTLHEHM----------------AYLL 341
Query: 457 AYITALKKLCNHPKLI-----YDTLRSGSPGT--SGFEDCIRFFPPEMLSGRSGSWTGG- 508
+ L++ CNHP+L+ DT R S G + E+ I F LS + S
Sbjct: 342 VMLLRLRQACNHPQLVNGYSHSDTTRKMSDGVRVAPRENLIMFLDLLKLSSTTCSVCSDP 401
Query: 509 ---------------NGAWVELSGKLQVLARLLAHLRERTNDRIV-------LVSNYTQT 546
V ++G L H + +D + +++Y
Sbjct: 402 PKDPVVTLCGHVFCYECVSVNINGDNNTCPALNCH-SQLKHDVVFTESAVRSCINDYDDP 460
Query: 547 LDLFAQLCREQRY----PHLRLDGTTSISKRQKLVNCFNDTSKDEFV--FLLSSKAGGCG 600
D A + + Y P D + + RQ + D S V L+S KAG G
Sbjct: 461 EDKNALVASRRVYFIENPSCDRDSSVACRARQSRHSTNKDNSISGLVCAMLMSLKAGNLG 520
Query: 601 LNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKV 652
LN++ + ++L D WNP QA R R GQ + V + R T+EE++
Sbjct: 521 LNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEERI 572
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 521 VLARLLAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCF 580
+L+ L+A +E N + V+ S + + L L + + LRLDG ++ KR +++ F
Sbjct: 693 LLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF 752
Query: 581 NDTSKDEFVFLLSS-KAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYI 639
+ V LL+S KA G G+NL +R+ LFDP WNPA +QA R+ R GQK+ V +
Sbjct: 753 GNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKM 812
Query: 640 YRFLSAGTIEEKVYQRQMSKEGL 662
R ++ +IEE+V + Q K+ L
Sbjct: 813 IRMIARNSIEERVLELQQKKKNL 835
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 145/351 (41%), Gaps = 72/351 (20%)
Query: 187 IHGCILADDMGLGKTLQSITLLY----------TLLSQGFDGK----------------- 219
+ G + ADDMGLGKTL ++L+ T + DG+
Sbjct: 259 LRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSS 318
Query: 220 -PMVRK----------------AIIVTPTSLVSNWEAEIKKWVGERVRLVALCES-TRED 261
+ RK +IV P S++S W ++++ + V + R D
Sbjct: 319 ESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTD 378
Query: 262 VVSGIGNFTSPRSNLQVLIVSYETFRMHSS---KFXXXXXXXXXXXXEAHRLKNDQTITN 318
V+ + + +++ +Y T + S EAH +KN +
Sbjct: 379 DVNELMKY-------DIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQS 431
Query: 319 RALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPTA 378
R + L RR ++GTP+QN + ++++ F + + + Y+++ I + P
Sbjct: 432 RVVCKLKASRRWAVTGTPIQNGSFDLYSLMAF----LRFEPFSIKSYWQSLI---QRPLG 484
Query: 379 TTEEKKLSAERTTELSAKVNQFILRRTNALLSNHLPPKIVQVVCCKLTPLQSDLYKHFL- 437
+K LS R L A ++ LRRT LPPK V+ +L+P + LY H
Sbjct: 485 QGNKKGLS--RLQVLMATIS---LRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEG 539
Query: 438 QSKNVKRAI--NEELKQ--SKILAYITALKKLCNHPKLIYDTLRSGSPGTS 484
++K V + + N L + S +L+ I L++LC+ L LRS + TS
Sbjct: 540 EAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTS 590
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 5/177 (2%)
Query: 516 SGKLQVLARLLAHLRERT-NDRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQ 574
S K++ L + + ER + + ++ S +T LDL + + ++L G+ S + +
Sbjct: 506 STKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKD 565
Query: 575 KLVNCFNDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQK 634
+ F + D V L+S +AGG LNL + + + DP WNPA +QA R+ R GQ
Sbjct: 566 AALKNFKE-EPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQC 624
Query: 635 KRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFT 691
K V + RF+ T+EEK+ Q KE L + + ++++++ L +D++ LF
Sbjct: 625 KPVRVVRFIMEKTVEEKILTLQKKKEDLFESTLGDSEEAVVQK---LGEDDIKSLFA 678
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 155 VVPLLVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQ 214
++PLL +Q+E F A + + G ILAD+MG+GKT+Q+I+L+ L +
Sbjct: 131 IIPLL-----KYQKE-----FLAWATIQELSAVRGGILADEMGMGKTIQAISLV--LARR 178
Query: 215 GFD---GKPMVRKAIIVTPTSLVSNWEAEIKKWVGE-RVRLVALCESTREDVVSGIGNFT 270
D + V +++ P +S W EI + R++ R+ V + N+
Sbjct: 179 EVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMNYD 238
Query: 271 SPRSNLQVLIVSY-------ETFR-MHSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALA 322
+ ++ Y ET +HS K+ EAH +KN + T +A+
Sbjct: 239 FVLTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVD------EAHDIKNRSSRTAKAVF 292
Query: 323 ALPCKRRVLLSGTPLQNDLEEFFAMVNFT 351
AL R LSGTPLQND++E +++V+++
Sbjct: 293 ALEATYRWALSGTPLQNDVDELYSLVSYS 321
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Query: 535 DRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSS 594
++ ++ S +T+ L+L + RLDGT S++ R K V FN T + V ++S
Sbjct: 966 EKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFN-TLPEVTVMIMSL 1024
Query: 595 KAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQ 654
KA GLN++ +++ D WNP QA R R GQ + V + RF T+E+++
Sbjct: 1025 KAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILA 1084
Query: 655 RQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFTFD 693
Q K + V D + + L+ EDL LF D
Sbjct: 1085 LQQKKRMM--VASAFGEDEKGSRQSHLTVEDLSYLFMAD 1121
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRY 365
EA +KN +T RA L KRR LSGTP+QN +++ ++ F F
Sbjct: 636 EAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCST 695
Query: 366 YEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSN-----HLPPKIVQV 420
+ PI R P + +L A + +LRRT L + LPPK +++
Sbjct: 696 IKNPIT--RNPVKGYQ----------KLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 743
Query: 421 VCCKLTPLQSDLYKHF-LQSKNVKRAINEE--LKQS--KILAYITALKKLCNHPKLI 472
T + D Y +S+ R E +KQ+ IL + L++ C+HP L+
Sbjct: 744 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV 800
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Query: 535 DRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSS 594
++ ++ S +T+ L+L + RLDGT S++ R K V FN T + V ++S
Sbjct: 1124 EKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFN-TLPEVTVMIMSL 1182
Query: 595 KAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQ 654
KA GLN++ +++ D WNP QA R R GQ + V + RF T+E+++
Sbjct: 1183 KAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILA 1242
Query: 655 RQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFTFD 693
Q K + V D + + L+ EDL LF D
Sbjct: 1243 LQQKKRMM--VASAFGEDEKGSRQSHLTVEDLSYLFMAD 1279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRY 365
EA +KN +T RA L KRR LSGTP+QN +++ ++ F F
Sbjct: 794 EAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCST 853
Query: 366 YEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSN-----HLPPKIVQV 420
+ PI R P + +L A + +LRRT L + LPPK +++
Sbjct: 854 IKNPIT--RNPVKGYQ----------KLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 901
Query: 421 VCCKLTPLQSDLYKHF-LQSKNVKRAINEE--LKQS--KILAYITALKKLCNHPKLI 472
T + D Y +S+ R E +KQ+ IL + L++ C+HP L+
Sbjct: 902 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV 958
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 163 LRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMV 222
++PHQ EG QF+ C + P GCI+A G GKT I+ + + L++ KP+V
Sbjct: 350 MKPHQIEGFQFL--CSNLVADDPG--GCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLV 405
Query: 223 RKAIIVTPTSLVSNWEAEIKKWVGERVRLVALCESTREDVVSGIGNFTSPRSNLQVLIVS 282
V P ++ W+ E +W E + L+ + E+ + +L +
Sbjct: 406 -----VLPKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLG 460
Query: 283 YETFRM---------HSSKFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLS 333
Y+ F S + E H +N+ T ++LA + R+V+LS
Sbjct: 461 YQQFSTIVCDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLS 520
Query: 334 GTPLQNDLEEFFAMVNFTNPGIL 356
GT QN ++E F ++N P L
Sbjct: 521 GTLYQNHVKEVFNILNLVRPKFL 543
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 526 LAHLRERTNDRIVLVSNYTQTLDLFAQLCREQRYPHLR-----LDGTTSISKRQKLVNCF 580
L +L + +++++ S Y L +L + L L G TS +R+ + F
Sbjct: 702 LINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETF 761
Query: 581 NDTSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIY 640
N +S D +F S KA G G++L+G +R+++ D NP+ +QA R +R GQKK V+ Y
Sbjct: 762 N-SSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAY 820
Query: 641 RFLSAGTIEEKVYQRQMSKEGLQKV 665
R ++ + EE+ + KE + K+
Sbjct: 821 RLIAGSSPEEEDHNTCFKKEVISKM 845
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 535 DRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSS 594
++ ++ + +T+ LDL + + R DG ++ R V FN T D V ++S
Sbjct: 1115 EKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFN-TLPDVSVMIMSL 1173
Query: 595 KAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQ 654
KA GLN++ +++ D WNP QA R R GQ + V + RF T+E+++
Sbjct: 1174 KAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILA 1233
Query: 655 RQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLF 690
Q K + E + E + LS EDL LF
Sbjct: 1234 LQQKKRKMVASAFGEHENGSRE--SHLSVEDLNYLF 1267
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 22/174 (12%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRY 365
EA +KN +T + A + L KRR LSGTP+QN + + ++ F F
Sbjct: 764 EAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCET 823
Query: 366 YEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSN-----HLPPKIVQV 420
+ PI E L A + + +LRRT L + LPPK +++
Sbjct: 824 IKNPI------------SSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIEL 871
Query: 421 VCCKLTPLQSDLYKHFL-----QSKNVKRAINEELKQSKILAYITALKKLCNHP 469
T + D Y Q K A + IL + L++ C HP
Sbjct: 872 RRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 925
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 535 DRIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSS 594
++ ++ + +T+ LDL + + R DG ++ R V FN T D V ++S
Sbjct: 1072 EKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFN-TLPDVSVMIMSL 1130
Query: 595 KAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQ 654
KA GLN++ +++ D WNP QA R R GQ + V + RF T+E+++
Sbjct: 1131 KAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILA 1190
Query: 655 RQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLF 690
Q K + E + E + LS EDL LF
Sbjct: 1191 LQQKKRKMVASAFGEHENGSRE--SHLSVEDLNYLF 1224
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 133/368 (36%), Gaps = 79/368 (21%)
Query: 158 LLVRFLRPHQREGVQFMFDCVAGLCSTPNIHGCILADDMGLGKTLQSITLLYTLLSQGF- 216
L V LR HQR + +M S G ILADD GLGKT+ +I L+ T S +
Sbjct: 538 LAVSLLR-HQRIALSWM---SQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYL 593
Query: 217 ----------------------------------DGKPMVRKAIIVTPTSLVSNWEAEIK 242
G+P +IV PTSL+ W E++
Sbjct: 594 PCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAA-GTLIVCPTSLMRQWADELR 652
Query: 243 KWVGERVRLVAL----CESTRE-------DVVSGIGNFTSPRSNLQVLIVSYETFRMHSS 291
K V L L C T++ DVV + S R ++ V + + +
Sbjct: 653 KKVTLEAHLSVLVYHGCSRTKDPHELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQV 712
Query: 292 KFXXXXXXXXXXXXEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFT 351
+ EA +KN +T + A + L KRR LSGTP+QN + + ++ F
Sbjct: 713 SWFRVVLD------EAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFL 766
Query: 352 NPGILGDIAHFRRYYEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSN 411
F + PI E L A + + +LRRT L +
Sbjct: 767 KYDPYSSYQTFCETIKNPI------------SSYPGEGYKTLQAILKKVMLRRTKDTLLD 814
Query: 412 -----HLPPKIVQVVCCKLTPLQSDLYKHFL-----QSKNVKRAINEELKQSKILAYITA 461
LPPK +++ T + D Y Q K A + IL +
Sbjct: 815 GKPVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLR 874
Query: 462 LKKLCNHP 469
L++ C HP
Sbjct: 875 LRQACGHP 882
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 536 RIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSK 595
+ ++ S +T LDL E RLDGT S++ R + V F+ D V L+S K
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFS-KKPDVKVMLMSLK 952
Query: 596 AGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQR 655
AG GLN++ ++L D WNP QA R R GQ + V + R T+E+++ +
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKL 1012
Query: 656 QMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLF 690
Q K + E+ L+ +DL+ LF
Sbjct: 1013 QEEKRTMVASAFGEEHGG--SSATRLTVDDLKYLF 1045
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRY 365
EA +KN +T R+ L KRR LSGTP+QN +++ ++ F F
Sbjct: 549 EAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRYDPYAVYKSFYST 608
Query: 366 YEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSN-----HLPPKIVQV 420
+ PI + S + +L A + +LRRT L + +LPPK+V +
Sbjct: 609 IKVPI------------SRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPKVVNL 656
Query: 421 VCCKLTPLQSDLYKHF-LQSKNVKRAINEELKQSKILAYI----TALKKLCNHPKLI 472
+ + YK S++ +A + S+ A I L++ C+HP+L+
Sbjct: 657 SQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLV 713
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 536 RIVLVSNYTQTLDLFAQLCREQRYPHLRLDGTTSISKRQKLVNCFNDTSKDEFVFLLSSK 595
+ ++ S +T LDL E RLDGT S+ R + V F++ D V ++S K
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSN-DPDVKVMIMSLK 886
Query: 596 AGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQR 655
AG GLN+I ++L D WNP QA R R GQ + V + R T+E+++
Sbjct: 887 AGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILAL 946
Query: 656 QMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLF 690
Q K + V D L+ +DL+ LF
Sbjct: 947 QEEKRKM--VASAFGEDHGGSSATRLTVDDLKYLF 979
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 34/208 (16%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRY 365
EA +KN +T RA L KRR LSGTP+QN +++ ++ F F
Sbjct: 478 EAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFCHQ 537
Query: 366 YEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSN-----HLPPKIVQV 420
+ PI + S + +L A + +LRRT L + +LPPK + +
Sbjct: 538 IKGPI------------SRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPKTINL 585
Query: 421 VCCKLT--------PLQSDLYKHFLQSKNVKRAINEELKQSKILAYITALKKLCNHPKLI 472
+ L+SD F K A + IL + L++ C+HP+L+
Sbjct: 586 SQVDFSVEERSFYVKLESDSRSQF---KAYAAAGTLNQNYANILLMLLRLRQACDHPQLV 642
Query: 473 --YDTLRSGSPGTSGFEDCIRFFPPEML 498
Y++ G E+ ++ P E L
Sbjct: 643 KRYNSDSVGKVS----EEAVKKLPKEDL 666
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 536 RIVLVSNYTQTLDLFAQLCREQRYPHLRLDG----TTSISK---RQKLVNCFNDTSKDEF 588
++++ S++ LD+ +R+ G T+ISK +K N K+E
Sbjct: 1451 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNSHQKEEK 1510
Query: 589 ---VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANYKQAAARVWRDGQKKRVYIYRFLSA 645
V LL + G GLNL+ ++L +P NPA QA RV R GQ+K ++RFL +
Sbjct: 1511 SIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVS 1570
Query: 646 GTIEEKVYQRQMSKEGLQKVIQREQTDSLLEQGNFLSTEDLRDLFT 691
GT+EE +Y+ +K T + +Q FL+ +DL LF
Sbjct: 1571 GTVEESIYKLNRNKNTNLSSFSSRNTKNQDQQ--FLTLKDLESLFA 1614
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 306 EAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRY 365
EA +KN +T RA L KRR LSGTP+QN +++ ++ F F
Sbjct: 801 EAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCST 860
Query: 366 YEAPIICGREPTATTEEKKLSAERTTELSAKVNQFILRRTNALLSN-----HLPPKIVQV 420
+ PI R P + +L A + +LRRT L + LPPK +++
Sbjct: 861 IKNPIT--RNPVKGYQ----------KLQAILKTVMLRRTKGSLLDGKPIISLPPKSIEL 908
Query: 421 VCCKLTPLQSDLYKHF-LQSKNVKRAINEE--LKQS--KILAYITALKKLCNHPKLI 472
T + D Y +S+ R E +KQ+ IL + L++ C+HP L+
Sbjct: 909 RKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLV 965